4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Col-0 V. longisporum-inoculated 48 hpi
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Col-0 V. longisporum-inoculated 48 hpi"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 V. longisporum-inoculated 48 hpi		 Correlation to
Col-0 V. longisporum-inoculated 48 hpi		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 V. longisporum-inoculated 48 hpi 1.00 >More info 1.00 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
2 P.p 2.5hai 0.83 >More info 0.78 >More info At-Control roots Original data GEO bulk
3 P.p 10.5hai 0.83 >More info 0.76 >More info At-Control roots Original data GEO bulk
4 P.p 6hai 0.84 >More info 0.74 >More info At-Control roots Original data GEO bulk
5 P.p 30hai 0.81 >More info 0.73 >More info At-Control roots Original data GEO bulk
6 ani1 T16 -0.85 >More info -0.66 >More info WT T16 root tissue Original data GEO bulk
7 AgNO3 3 h 0.74 >More info 0.76 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
8 CeO2 germinant -0.69 >More info -0.79 >More info Millipore Water germinant CeO2 seedling Original data
9 seedlings-week-old RECA1-overexpressing
transgenic		 0.77 >More info 0.69 >More info seedlings-week-old Col-0 seedlings Original data
10 ani1 T0.5 -0.72 >More info -0.71 >More info WT T0.5 root tissue Original data GEO bulk
11 seedlings protease IV 0.70 >More info 0.72 >More info seedlings nontreated control whole seedling Original data
12 chito-octamer 0.68 >More info 0.71 >More info Col Mock Original data GEO bulk
13 chito-tetramer 0.68 >More info 0.70 >More info Col Mock Original data GEO bulk
14 oligomycin 4 h 0.73 >More info 0.63 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
15 Laer Flg22 2h 0.69 >More info 0.66 >More info Laer Control leaf discs Original data GEO bulk
16 WT chitooctaose 0.67 >More info 0.67 >More info WT water Original data GEO bulk
17 WT+chitooctaose 0.61 >More info 0.73 >More info WT+water chitooctaose seedlings Original data GEO bulk
18 Laer Flg22 1h 0.67 >More info 0.66 >More info Laer Control leaf discs Original data GEO bulk
19 root Dosed gold 0.73 >More info 0.60 >More info root No gold .125 mM gold 24 h roots Original data
20 Cor hrpS 10h 0.52 >More info 0.81 >More info Mock 10h Cor hrpS Original data GEO bulk
21 0.125 mM gold 24 h 0.73 >More info 0.60 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
22 col-5 hrpA 12h 0.67 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
23 Laer pretreat GA Flg22 1h 0.61 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
24 ein2-1 9 hpi A. brassicicola 0.63 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
25 AFB1 flg22 2h 0.67 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
26 pepr1-1 Pepr2-3 +Pep2 2h -0.66 >More info -0.65 >More info WT +Pep2 2h Pep2 Original data GEO bulk
27 DFPM 0.75 >More info 0.56 >More info control Original data GEO bulk
28 WT flg22 1h 0.62 >More info 0.68 >More info WT 0h Leaf tissue Original data GEO bulk
29 miR393 flg22 1h 0.59 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
30 miR393 flg22 2h 0.67 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
31 CMP 4hr 0.73 >More info 0.56 >More info Acetone 4hr root Original data GEO bulk
32 Fenclorim 4hr 0.74 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
33 Col ozone 3h 0.56 >More info 0.73 >More info Col clean-air 3h ozone Original data GEO bulk
34 GST NPP1 4 h (leaf) 0.63 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
35 WT NAA/flg 1h 0.63 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
36 TNT-seedlings 0.62 >More info 0.66 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
37 Laer Flg22+GA 2h 0.65 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
38 AFB1 flg22 1h 0.60 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
39 Col upon hypoxia 6 hrs 0.72 >More info 0.54 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
40 hrpA fliC 7h 0.66 >More info 0.60 >More info Mock 7h hrpA fliC Original data GEO bulk
41 WT flg22 2h 0.65 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
42 toc1-1-53hr 0.67 >More info 0.59 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
43 AvrRpm1 2 h (leaf) 0.57 >More info 0.68 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
44 WT NAA/flg 2h 0.70 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
45 Col-0 9 hpi A. brassicicola 0.64 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
46 WT-NOCO2 INFECTED 0.65 >More info 0.60 >More info WT-MOCK Original data GEO bulk
47 sid2-2 9 hpi A. brassicicola 0.64 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
48 Chitosan 3h Treatment 0.68 >More info 0.56 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
49 E.coli TUV86 2 fliC 7h 0.62 >More info 0.62 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
50 Col whole leaf 7dpi 0.67 >More info 0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
51 hrcC 0.62 >More info 0.61 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
52 bak1-3 +Pep2 10h 0.68 >More info 0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
53 efr-1 +elf18 10h -0.66 >More info -0.56 >More info WT +elf18 10h elf18 Original data GEO bulk
54 Laer Flg22+GA 1h 0.63 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
55 hrpA 7h 0.60 >More info 0.62 >More info Mock 7h hrpA Original data GEO bulk
56 dde2-2 9 hpi A. brassicicola 0.64 >More info 0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
57 Whole root - low pH 12H 0.70 >More info 0.51 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
58 Cycloheximide 3 h 0.61 >More info 0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
59 Phaseolicola 2 h (leaf) 0.51 >More info 0.68 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
60 WT +elf18 2h 0.65 >More info 0.54 >More info WT untreated elf18 Original data GEO bulk
61 WT 2-4h Xanthomonas 0.52 >More info 0.67 >More info WT T0 Original data GEO bulk
62 E.coli 0157 H7 7h 0.61 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
63 R. solani AG8 0.67 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
64 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.56 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
65 B.cinerea 18 h infection 0.55 >More info 0.63 >More info Mock 18 h Original data Botrytis cinerea infection
66 Botrytis cinerea 18h 0.55 >More info 0.63 >More info control 18h Original data GEO bulk
67 toc1-1-49hr 0.69 >More info 0.48 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
68 IRP1-OE-Fe--shoot 0.58 >More info 0.59 >More info COL-0-Fe--shoot shoot Original data
69 pmr5 pmr6 0.63 >More info 0.53 >More info Col-0 Original data GEO bulk
70 Te ozone 0.67 >More info 0.49 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
71 col-5 DC3000-avrRpm 4h 0.59 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
72 R. solani AG2-1 0.63 >More info 0.52 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
73 C24 ozone 0.68 >More info 0.47 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
74 S15-118 0.50 >More info 0.65 >More info wt Original data GEO bulk
75 Col0-PsmES4326-24hpi 0.54 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
76 Col whole leaf 5dpi 0.57 >More info 0.58 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
77 coi1-2 0.56 >More info 0.58 >More info Col-0 mock Whole seedling Original data GEO bulk
78 toc1-1-77hr 0.76 >More info 0.38 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
79 pepr1-1 Pepr2-3 +Pep2 10h -0.60 >More info -0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
80 WT +elf18 10h 0.64 >More info 0.50 >More info WT untreated elf18 Original data GEO bulk
81 35S::ERF104 Flg22 4h 0.59 >More info 0.55 >More info 35S::ERF104 H2O 4h Original data GEO bulk
82 oas-a1.1 Cd 18h 0.63 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
83 anac017-2 AntimycinA 3h -0.57 >More info -0.56 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
84 PNO8 3 h 0.52 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
85 oligomycin 1 h 0.53 >More info 0.60 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
86 del1-1 mutant 5d uninfected 0.52 >More info 0.60 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
87 Mutant siz1-3 0.61 >More info 0.51 >More info Col-0 Original data GEO bulk
88 bio4-1 mutant leaves 0.60 >More info 0.52 >More info WT leaves leaves Original data GEO bulk
89 siz1-3 control 0.61 >More info 0.51 >More info Col-0 control Original data GEO bulk
90 coi1-16 ein2 sid2 ozone 0.64 >More info 0.48 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
91 WT Col-0 Bgh inoculated 0.60 >More info 0.52 >More info WT Col-0 Un-inoculated Original data GEO bulk
92 ckh1 CK200 0.47 >More info 0.65 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
93 nd-1 V. longisporum-inoculated 48 hpi -0.42 >More info -0.70 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
94 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.67 >More info 0.44 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
95 P35S:rGRF3 0.67 >More info 0.44 >More info WS Original data GEO bulk
96 col-5 hrpA 4h 0.52 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
97 tunicamycin -0.57 >More info -0.54 >More info DMF Original data GEO bulk
98 Chitin 0.52 >More info 0.58 >More info Col C Original data GEO bulk
99 wavy 0.60 >More info 0.50 >More info WT Original data GEO bulk
100 S58-2 0.51 >More info 0.59 >More info wt Original data GEO bulk
101 Col-0 ozone 0.63 >More info 0.47 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
102 LTN008-2 aza-dc 0.70 >More info 0.40 >More info LTN012-2 Mock Original data
103 col-5 DC3000 4h 0.51 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
104 coi1-16 ein2 sid2 ctrl -0.61 >More info -0.49 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
105 Col BTH 0.43 >More info 0.67 >More info Col rosettes Original data GEO bulk
106 CT101 ozone 0.67 >More info 0.42 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
107 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.63 >More info 0.46 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
108 arf2 mock 0.66 >More info 0.43 >More info Col mock Original data GEO bulk
109 Mutant arf2 (etiol) 0.66 >More info 0.43 >More info Col (etiol) Original data GEO bulk
110 msh1 albino 0.52 >More info 0.57 >More info WT aerial part Original data GEO bulk
111 camta1/2/3 24h cold 0.59 >More info 0.50 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
112 IAA7mII over-expressor IAA Treated 0.40 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
113 +1.6 mM Tween 20 1 h. 0.36 >More info 0.73 >More info +distilled water 1 h. Original data GEO bulk
114 Nicotinamide-69hr 0.61 >More info 0.47 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
115 WT AntimycinA 3h 0.55 >More info 0.53 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
116 Nicotinamide-73hr 0.56 >More info 0.52 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
117 TiO2 germinant -0.61 >More info -0.46 >More info Millipore Water germinant TiO2 seedling Original data
118 WT Bc inoculation 14h 0.65 >More info 0.42 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
119 SCR-GR Time 1H Dex 0.56 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
120 cs26 long day 0.56 >More info 0.51 >More info Leaves-WT-LD leaf Original data GEO bulk
121 arf2 brz -0.66 >More info -0.41 >More info arf2 mock Original data GEO bulk
122 CMP 24hr 0.66 >More info 0.40 >More info Acetone 24hr root Original data GEO bulk
123 toc1-1-57hr 0.60 >More info 0.46 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
124 Col-Luc WT 3h antimycin A 0.54 >More info 0.52 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
125 Kas2 roots 2hr KNO3 nitrogen 0.68 >More info 0.37 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
126 mil4 BTH 0.53 >More info 0.52 >More info Col BTH rosettes Original data GEO bulk
127 Nicotinamide-53hr 0.60 >More info 0.45 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
128 mpk6-ko Flg22 4h 0.44 >More info 0.61 >More info mpk6-ko H2O 4h Original data GEO bulk
129 Dex-rga(delta17) 4h GA4+DEX -0.57 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
130 bZIP1ko mutant N+Light- 0.48 >More info 0.57 >More info WT-sib N+Light- whole plant Original data GEO bulk
131 Seedling KUA1-IOX est 0.65 >More info 0.39 >More info Seedling KUA1-IOX mock Original data
132 pad4-PsmES4326-24hpi -0.61 >More info -0.43 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
133 Flagellin 4 h (leaf) 0.53 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
134 35S:RPS4 eds1-2 8h -0.56 >More info -0.48 >More info 35S:RPS4 8h leaves Original data
135 miR393 0h -0.47 >More info -0.57 >More info WT 0h Leaf tissue Original data GEO bulk
136 aba3-1 0.46 >More info 0.58 >More info wt Original data GEO bulk
137 atmyc2 cop1 Seedling Dark 0.70 >More info 0.33 >More info WT Seedling Dark Original data GEO bulk
138 wrky33 Bc inoculation 14h 0.67 >More info 0.36 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
139 8hr-pH4.5 0.58 >More info 0.45 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
140 ORS1 induced 0.54 >More info 0.49 >More info mock-induced rosette leaves Original data GEO bulk
141 Oxidative Stress 3 h (root) -0.56 >More info -0.47 >More info Stress mock 3 h (root) Original data Stress treatments
142 CMV-WT 0.60 >More info 0.43 >More info Mock-At Aerial tissues Original data GEO bulk
143 Col leaves 48h LT 0.54 >More info 0.49 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
144 pvip1 pvip2 0.55 >More info 0.48 >More info Col-0 whole rosettes Original data GEO bulk
145 Leafminer damaged seedlings 0.47 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
146 Dex-rga(delta17) 2h GA4+DEX -0.56 >More info -0.46 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
147 root - 01% oxygen - 2h 0.47 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
148 bak1-3 +Pep2 2h 0.49 >More info 0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
149 cpr5npr1svi1 0.48 >More info 0.54 >More info WT(COL) Original data GEO bulk
150 cpr5npr1 0.49 >More info 0.53 >More info WT(COL) Original data GEO bulk
151 Shoot -Cs 0.48 >More info 0.54 >More info Control-shoot Original data GEO bulk
152 E.orontii Infection 3 day 0.50 >More info 0.51 >More info Uninfection 3 day Original data Elicitor treatments
153 bio4-1 mutant watered00µM biotin leaves -0.57 >More info -0.44 >More info bio4-1 mutant leaves leaves Original data GEO bulk
154 WT powdery mildew 0.50 >More info 0.51 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
155 erf104-ko Flg22 4h 0.44 >More info 0.57 >More info erf104-ko H2O 4h Original data GEO bulk
156 35S::PI ap3-3 35S::AP-GR +DEX 0.45 >More info 0.56 >More info 0hr DEX Original data GEO bulk
157 KCl germinant -0.62 >More info -0.38 >More info Millipore Water germinant KCl seedling Original data
158 DC3000 2 h (leaf) 0.50 >More info 0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
159 Mutant siz1-3 (Drought) 0.53 >More info 0.47 >More info Col-0 (Drought) Original data GEO bulk
160 (Col-0)+100 uM As 0.59 >More info 0.41 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
161 siz1-3 drought 0.53 >More info 0.47 >More info Col-0 drought Original data GEO bulk
162 camta1/3 warm 0.53 >More info 0.46 >More info WT warm entire aerial part Original data GEO bulk
163 col-5 hrpA 2h 0.52 >More info 0.47 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
164 camta1/2/3 warm 0.53 >More info 0.46 >More info WT warm entire aerial part Original data GEO bulk
165 WT +Pep2 2h 0.64 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
166 pmr5 0.51 >More info 0.48 >More info Col-0 Original data GEO bulk
167 GV3101 6dpi 0.61 >More info 0.38 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
168 GO5; 8h switch to ambient CO2 concentrations; 0.52 >More info 0.47 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
169 mkk1/mkk2 24h BTH rep 0.61 >More info 0.38 >More info Col-0 24h BTH rep Original data GEO bulk
170 col-5 DC3000 12h 0.60 >More info 0.39 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
171 Col-0 INA 6d 0.48 >More info 0.51 >More info Col-0 MOCK 6d Original data GEO bulk
172 camta2/3 warm 0.54 >More info 0.44 >More info WT warm entire aerial part Original data GEO bulk
173 (Col-0)+200 uM As 0.60 >More info 0.38 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
174 cpr5 0.56 >More info 0.42 >More info WT seedling Original data GEO bulk
175 WT roots - Fe 0.73 >More info 0.25 >More info WT roots + Fe Roots Original data GEO bulk
176 WT +Pep2 10h 0.61 >More info 0.37 >More info WT untreated Pep2 Original data GEO bulk
177 safener treated 0.53 >More info 0.45 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
178 mkk1/mkk2 control rep 0.56 >More info 0.42 >More info Col-0 Time 0 rep Original data GEO bulk
179 Cocultivation 8 hrs root 0.62 >More info 0.36 >More info Mock cocultivation 8 hrs root Root Original data
180 SLWF infested 0.52 >More info 0.46 >More info SLWF uninfested rosette tissue Original data GEO bulk
181 gpa1 -ABA GC -0.44 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
182 OE WRKY63.3 high light 0.45 >More info 0.53 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
183 AtLysM RLK1 mutant chitooctaose -0.39 >More info -0.59 >More info WT chitooctaose Original data GEO bulk
184 AvrRpt2 Col-0 6hpi 0.56 >More info 0.41 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
185 cpr5scv1 0.55 >More info 0.42 >More info WT(COL) Original data GEO bulk
186 IMI 4mM 0.59 >More info 0.38 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
187 edr1 18 h powdery mildew 0.53 >More info 0.44 >More info Col-0 18 h powdery mildew Original data GEO bulk
188 ARR22-ox (t-zeatin 3 h) 0.58 >More info 0.39 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
189 GST 4 h (leaf) 0.36 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
190 atmospheric CO2 high Mg root -0.65 >More info -0.31 >More info atmospheric CO2 normal Mg root Root Original data
191 whole roots -Fe 72 hour 0.61 >More info 0.35 >More info whole roots standard Original data GEO bulk
192 35S:RPS4 eds1-2 24h -0.53 >More info -0.43 >More info 35S:RPS4 24h leaves Original data
193 Fe starvation 72 h 0.61 >More info 0.35 >More info Control Original data GEO bulk
194 tor mutant glucose 0.61 >More info 0.35 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
195 Lipopolysaccaride4 h (leaf) 0.41 >More info 0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
196 Col-0 Root 100 mM ATP 30 min 0.55 >More info 0.40 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
197 SA 0.52 >More info 0.43 >More info WT mock Whole seedling Original data GEO bulk
198 CAX1/CAX3 mutant 0.59 >More info 0.36 >More info Col whole plant Original data GEO bulk
199 whole roots -Fe 48 hour 0.61 >More info 0.34 >More info whole roots standard Original data GEO bulk
200 csn5 (csn5a-2 csn5b) light 0.65 >More info 0.30 >More info WT light Original data GEO bulk
201 Cor 10h 0.51 >More info 0.44 >More info Mock 10h Cor Original data GEO bulk
202 DC3000 hrcC 2 h (leaf) 0.38 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
203 Col-0 Flg22 4h 0.36 >More info 0.59 >More info Col-0 H2O 4h Original data GEO bulk
204 toc1-1-65hr 0.60 >More info 0.34 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
205 9m.KCl 0.62 >More info 0.32 >More info To. KCl 14 day old Roots Original data GEO bulk
206 whole roots -Fe 6 hour 0.33 >More info 0.61 >More info whole roots standard Original data GEO bulk
207 Col-0-avrB-6h 0.43 >More info 0.51 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
208 5-Triiodobenzoic acid3 h 0.60 >More info 0.33 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
209 root epidermis and lateral root cap pH4.6 0.62 >More info 0.31 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
210 Nicotinamide-57hr 0.61 >More info 0.32 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
211 WT cold 0.55 >More info 0.37 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
212 Time-0 chr11-1chr17-1 -0.54 >More info -0.38 >More info Time-0 Col-0 leaf explants Original data
213 WT+H2O2 0.38 >More info 0.54 >More info WT H2O2 Original data GEO bulk
214 root columella root cap -S -0.54 >More info -0.37 >More info root columella root cap pH5.7 Original data GEO bulk
215 Col-0 low oxygen 0.56 >More info 0.35 >More info Col-0 control low oxygen root Original data GEO bulk
216 hira-root -0.52 >More info -0.39 >More info WT-root root Original data
217 Nicotinamide-85hr 0.50 >More info 0.41 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
218 Compost 0.57 >More info 0.34 >More info Perlite Compost Original data GEO bulk
219 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.34 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
220 IRP1-OE-Ctrl--shoot 0.56 >More info 0.34 >More info COL-0-Ctrl--shoot shoot Original data
221 gh3.5-1D 48 hpi 0.53 >More info 0.37 >More info Col-0 uninoculated Original data GEO bulk
222 9m.KNO3 0.65 >More info 0.25 >More info To. KNO3 14 day old Roots Original data GEO bulk
223 WT-SA 0.40 >More info 0.50 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
224 Nicotinamide-61hr 0.55 >More info 0.34 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
225 Phytoprostane A1 4 h 0.50 >More info 0.39 >More info Col-0 Original data GEO bulk
226 Tsu -Fe 24h Roots 0.54 >More info 0.35 >More info Tsu +Fe 24h Roots Original data GEO bulk
227 OH1 0.51 >More info 0.38 >More info Col-0 leaves Original data GEO bulk
228 Octopus overexpressor 35SDYG25 0.54 >More info 0.35 >More info WS Original data GEO bulk
229 Tsu-1 -Fe 24h 0.54 >More info 0.35 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
230 root stele pH4.6 0.58 >More info 0.31 >More info root stele pH5.7 Original data GEO bulk
231 NFA8 roots 2hr KCl control 0.57 >More info 0.32 >More info Col0 roots 2hr KCl control root Original data GEO bulk
232 bbx24 in Simulated Shade -0.54 >More info -0.34 >More info WT in simulated shade shade seedling Original data
233 Root -P -0.71 >More info -0.17 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
234 vte2-1 3d vernalization 0.50 >More info 0.38 >More info WT 3d vernalization Original data GEO bulk
235 Cor 24h 0.50 >More info 0.38 >More info Mock 24h Cor Original data GEO bulk
236 sid2-1 cold -0.52 >More info -0.36 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
237 UV 0.53 >More info 0.34 >More info WT aerial region Original data GEO bulk
238 npr1-PsmES4326-24hpi -0.50 >More info -0.37 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
239 Heat shock optimum 0.22 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
240 Ts5 roots 2hr KCl control 0.54 >More info 0.32 >More info Col0 roots 2hr KCl control root Original data GEO bulk
241 gun1-1 -lincomycin -0.53 >More info -0.33 >More info Col-0 -lincomycin Original data GEO bulk
242 Col-0 C2H4 24h 0.56 >More info 0.30 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
243 Light 0.32 >More info 0.54 >More info Control Original data GEO bulk
244 siliques AtHb1 control 0.34 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
245 Col-0 2HS 0.30 >More info 0.56 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
246 Root -Cs 0.50 >More info 0.36 >More info Control-root Original data GEO bulk
247 Nicotinamide-81hr 0.61 >More info 0.25 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
248 cdkf:1-2 0.58 >More info 0.28 >More info wt seedling young seedlings Original data GEO bulk
249 vtc2-1 -0.54 >More info -0.31 >More info Col-0 whole plant Original data GEO bulk
250 ALC Toc1 light-light Mock -0.63 >More info -0.22 >More info Col light-light Mock no ethanol Original data GEO bulk
251 gai Control 0.59 >More info 0.26 >More info Laer Control leaf discs Original data GEO bulk
252 Cs root 0.63 >More info 0.22 >More info control root Original data GEO bulk
253 eds16 whole leaf 5dpi -0.50 >More info -0.34 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
254 Col ozone 2d 0.51 >More info 0.33 >More info Col clean-air 2d ozone Original data GEO bulk
255 lht1 PstDC3000 48h 0.54 >More info 0.30 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
256 Triazolopyrimidine EC50 0.53 >More info 0.31 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
257 Blue Light 4 h 0.53 >More info 0.31 >More info White Light 4 h Original data Light treatments
258 Laer pretreat GA Flg22 0h 0.63 >More info 0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
259 Col-0 under 4 days salt 0.58 >More info 0.26 >More info Col-0 under control 4 days salt treatment rosette Original data
260 sdg2 0.57 >More info 0.27 >More info wt seedling Original data GEO bulk
261 35S:RPS4 eds1-2 2h -0.24 >More info -0.60 >More info 35S:RPS4 2h leaves Original data
262 Primisulfuron EC50 0.54 >More info 0.29 >More info Carrier (primisulfuron) Original data GEO bulk
263 Fenclorim 24hr 0.51 >More info 0.32 >More info Acetone 24hr root Original data GEO bulk
264 light -0.65 >More info -0.18 >More info dark light seedling Original data GEO bulk
265 cdpk6-yfp 0.50 >More info 0.33 >More info Kan seedlings Original data GEO bulk
266 WT 30μM arsenate 8 hours. 0.53 >More info 0.30 >More info WT control (not supplemented). Original data
267 Col light-light EtOH -0.52 >More info -0.31 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
268 Whole root - low pH 24H 0.57 >More info 0.26 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
269 ABA DFPM 0.62 >More info 0.21 >More info control Original data GEO bulk
270 HRE1-RNAi20 normoxia -0.61 >More info -0.22 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
271 gun1-1 +lincomycin -0.55 >More info -0.27 >More info Col-0 +lincomycin Original data GEO bulk
272 WR 35S 8h BL 0.53 >More info 0.29 >More info WR 35S 0h BL brassinosteroid root Original data
273 SA 4mM 0.51 >More info 0.31 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
274 Nicotinamide-65hr 0.58 >More info 0.24 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
275 WT 3h -P 0.25 >More info 0.57 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
276 root cells endodermis 140mM NaCl 3 hours 0.54 >More info 0.27 >More info root cells endodermis standard 1 hour root cells endodermis Original data
277 Nicotinamide-49hr 0.54 >More info 0.27 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
278 WT Red light 1h 0.66 >More info 0.15 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
279 Sulfometuron EC50 0.53 >More info 0.28 >More info Carrier Original data GEO bulk
280 CLO 4mM 0.53 >More info 0.27 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
281 irradiated leaf (WT 1d) 0.55 >More info 0.25 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
282 root cells endodermis 140mM NaCl 8 hours 0.51 >More info 0.29 >More info root cells endodermis standard 1 hour root cells endodermis Original data
283 WT leaves - Fe 0.53 >More info 0.27 >More info WT leaves + Fe Leaves Original data GEO bulk
284 PAHs stress 0.60 >More info 0.20 >More info exp control phenanthrene whole plants Original data GEO bulk
285 HARAP aerobic -0.27 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
286 seedlings +5AC 0.59 >More info 0.21 >More info control seedlings 10-day old whole seedling Original data GEO bulk
287 IAA 1h -0.56 >More info -0.23 >More info control 1h root Original data GEO bulk
288 nas4x leaves + Fe 0.55 >More info 0.24 >More info WT leaves + Fe Leaves Original data GEO bulk
289 15m.KCl 0.50 >More info 0.29 >More info To. KCl 14 day old Roots Original data GEO bulk
290 Laer pretreat JA Flg22 1h 0.58 >More info 0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
291 pnp1-1 1wk -P 0.65 >More info 0.13 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
292 (Ws-2)+100 uM As 0.54 >More info 0.24 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
293 Botrytis cinerea 48h 0.53 >More info 0.25 >More info control 48h Original data GEO bulk
294 csn3-1 light 0.54 >More info 0.23 >More info WT light Original data GEO bulk
295 SCL3 OE -0.52 >More info -0.25 >More info Col-0 whole root Original data GEO bulk
296 HARAP hypoxic 0.25 >More info 0.52 >More info hypoxic hypoxia Original data GEO bulk
297 Root GLU1-KO -0.50 >More info -0.26 >More info Root Col(0) roots Original data GEO bulk
298 RPL18 TuMV inoculated polysomal RNA 0.54 >More info 0.21 >More info mock inoculated polysomal RNA PO Original data GEO bulk
299 C24-1h IAA 0.62 >More info 0.13 >More info C24-0h IAA whole plant Original data GEO bulk
300 Kas2 roots 2hr KCl control 0.59 >More info 0.16 >More info Col0 roots 2hr KCl control root Original data GEO bulk
301 Te CA -0.51 >More info -0.24 >More info Col CA Leaves Original data
302 Light 3day wt -0.51 >More info -0.23 >More info 0h wt Original data
303 sps1 -0.58 >More info -0.16 >More info WT seedling Original data GEO bulk
304 Laer pretreat JA Flg22 2h 0.62 >More info 0.12 >More info Laer pretreat water control leaf discs Original data GEO bulk
305 Laer treat paclobutrazol (PAC) 0.50 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
306 35S::ZAT12 0.54 >More info 0.18 >More info gl1 Original data GEO bulk
307 Infected pft1 leaf 0.19 >More info 0.53 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
308 WT Shoot Hypoxia 0.18 >More info 0.54 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
309 bHLH122 ox -0.18 >More info -0.54 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
310 Shoot apex inflorescence (after bolting) 0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
311 Col-0 overexpressing At1g54160 control 0.58 >More info 0.11 >More info WT no treatement Original data GEO bulk
312 At1g54160 ox 0.58 >More info 0.11 >More info Col-0 Original data GEO bulk
313 scl3 0.58 >More info 0.11 >More info Col-0 whole root Original data GEO bulk
314 irradiated leaf (cmt 1d) 0.54 >More info 0.14 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
315 tor mutant 0.57 >More info 0.11 >More info WT (Col) none seedlings Original data GEO bulk
316 Laer pretreat GA+JA Flg22 0h 0.54 >More info 0.12 >More info Laer pretreat water control leaf discs Original data GEO bulk
317 Laer pretreat GA+JA Flg22 1h 0.52 >More info 0.14 >More info Laer pretreat water control leaf discs Original data GEO bulk
318 24h +Pi -0.62 >More info -0.04 >More info 24h -Pi root Original data GEO bulk
319 Ws seedlings 0.54 >More info 0.12 >More info ged1 seedlings Original data GEO bulk
320 ged1 seedlings -0.54 >More info -0.12 >More info Ws seedlings Original data GEO bulk
321 SA Treated 0.58 >More info 0.08 >More info Water Original data GEO bulk
322 +GA-60mins -0.52 >More info -0.13 >More info -60mins whole plant Original data GEO bulk
323 csn4-1 dark 0.55 >More info 0.10 >More info WT light Original data GEO bulk
324 Laer pretreat GA Flg22 2h 0.56 >More info 0.08 >More info Laer pretreat water control leaf discs Original data GEO bulk
325 toc1-1-61hr 0.51 >More info 0.13 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
326 fri-flc -0.61 >More info -0.02 >More info WT Original data GEO bulk
327 aln-1 -0.51 >More info -0.11 >More info Col-0 Aerial part of seedlings Original data
328 gul2-1 mutant 0.52 >More info 0.10 >More info WT 7 day-old whole seedlings Original data
329 RGA-GR-DEX 0.05 >More info 0.56 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
330 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
331 Root P recovery 0.57 >More info 0.04 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
332 Differentiation 12h 0.50 >More info 0.10 >More info Differentiation 0h leaves Original data
333 RPL18 TuMV inoculated total RNA 0.52 >More info 0.08 >More info mock inoculated total RNA PO Original data GEO bulk
334 bri1-116 -0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
335 ARR21C-ox 0.53 >More info 0.05 >More info Col-0 Original data ARR21C overexpression
336 flu dark 8hours/30 minute light 0.02 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
337 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.06 >More info -0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
338 HairpinZ 4 h (leaf) 0.61 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
339 sta1 0.53 >More info 0.04 >More info WT Original data GEO bulk
340 Shoot -P -0.54 >More info -0.02 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
341 IAA 0h -0.53 >More info -0.03 >More info control 0h root Original data GEO bulk
342 Col-0 24hpi A. brassicicola 0.54 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
343 Dark 0.02 >More info -0.57 >More info Control Original data GEO bulk
344 Cs shoot -0.00 >More info -0.52 >More info control shoot Original data GEO bulk
345 glk1 glk2 GLK1-GR +DEX 24h -0.76 >More info 0.26 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
346 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
347 P. infestans 6 h (leaf) 0.61 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
348 dsr1 0.53 >More info -0.10 >More info WT mock Whole seedling Original data GEO bulk
349 Mh0 UV -0.50 >More info 0.07 >More info Mh0 mock UV seedling Original data
350 SHR-GR Time 6H Dex 0.50 >More info -0.08 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
351 opr3 OPDA 0.5 h -0.09 >More info 0.50 >More info opr3 0 h Original data GEO bulk
352 Col PSTDC3000 24h 0.50 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
353 dor drought 0.55 >More info -0.26 >More info WT drought Original data GEO bulk
354 WT NAA 1h 0.34 >More info -0.58 >More info WT 0h Leaf tissue Original data GEO bulk
355 root - 04% oxygen - 30min -0.58 >More info 0.37 >More info root - 21% oxygen - 30min Original data GEO bulk
356 Dark 4 h pls UV-A 5 min -0.50 >More info 0.35 >More info Dark 4 h Original data Light treatments
357 root - 04% oxygen - 2h -0.42 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
358 root - 08% oxygen - 30min -0.51 >More info 0.45 >More info root - 21% oxygen - 30min Original data GEO bulk