4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on HARAP hypoxic
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "HARAP hypoxic"  Help Download transcriptome of top 30
Score Experiment Correlation from
HARAP hypoxic		 Correlation to
HARAP hypoxic		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 HARAP hypoxic 1.00 >More info 1.00 >More info hypoxic hypoxia Original data GEO bulk
2 amiRAP hypoxic 0.77 >More info 0.82 >More info hypoxic hypoxia Original data GEO bulk
3 WT chitooctaose 0.68 >More info 0.65 >More info WT water Original data GEO bulk
4 WT+chitooctaose 0.62 >More info 0.69 >More info WT+water chitooctaose seedlings Original data GEO bulk
5 chito-octamer 0.62 >More info 0.68 >More info Col Mock Original data GEO bulk
6 shoots bhlh100/101 100uM Fe 0.52 >More info 0.76 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
7 chito-tetramer 0.63 >More info 0.64 >More info Col Mock Original data GEO bulk
8 miR393 flg22 1h 0.60 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
9 seedlings protease IV 0.63 >More info 0.64 >More info seedlings nontreated control whole seedling Original data
10 Col-0 DCA 48h 0.59 >More info 0.65 >More info Col-0 MOCK 48h Original data GEO bulk
11 hypoxic -0.63 >More info -0.60 >More info WT aerobic hypoxia Original data GEO bulk
12 AFB1 flg22 1h 0.61 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
13 WT flg22 1h 0.59 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
14 npr1-3 MOCK 48h -0.51 >More info -0.67 >More info Col-0 MOCK 48h Original data GEO bulk
15 WT flg22 2h 0.47 >More info 0.71 >More info WT 0h Leaf tissue Original data GEO bulk
16 rosette Light Wounded 0.54 >More info 0.63 >More info rosette Light Control Original data GEO bulk
17 WT NAA/flg 1h 0.55 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
18 rosette Dark Wounded 0.52 >More info 0.62 >More info rosette Dark Control Original data GEO bulk
19 35S:RPS4 eds1-2 2h -0.48 >More info -0.66 >More info 35S:RPS4 2h leaves Original data
20 Cor hrpS 10h 0.61 >More info 0.52 >More info Mock 10h Cor hrpS Original data GEO bulk
21 Cycloheximide 3 h 0.60 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
22 AtLysM RLK1 mutant chitooctaose -0.55 >More info -0.56 >More info WT chitooctaose Original data GEO bulk
23 anac017-2 AntimycinA 3h -0.54 >More info -0.55 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
24 Col ozone 3h 0.43 >More info 0.66 >More info Col clean-air 3h ozone Original data GEO bulk
25 flu dark 8hours/30 minute light 0.42 >More info 0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
26 phyB mutant 22C 10hrs -0.49 >More info -0.59 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
27 Wounding Stress3 h (shoot) 0.42 >More info 0.65 >More info Stress mock 3 h (shoot) Original data Stress treatments
28 miR393 flg22 2h 0.53 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
29 Col-0-avrB-6h 0.55 >More info 0.51 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
30 npr1 sni1 SA 0.53 >More info 0.52 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
31 Leafminer damaged seedlings 0.49 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
32 P.p 2.5hai 0.57 >More info 0.48 >More info At-Control roots Original data GEO bulk
33 Chitin 0.56 >More info 0.48 >More info Col C Original data GEO bulk
34 Col-Luc WT 3h antimycin A 0.53 >More info 0.51 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
35 ataf1-1 mutant Col-0 Bgh inoculated 0.55 >More info 0.48 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
36 atr mock 0.63 >More info 0.40 >More info WT mock shoot apical meristem Original data
37 Col leaves 48h LT 0.52 >More info 0.50 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
38 ex2 flu dark 8hours/30 minute light 0.41 >More info 0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
39 Col0-PsmES4326-24hpi 0.41 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
40 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.57 >More info 0.44 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
41 Col-0 ozone 0.57 >More info 0.44 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
42 pepr1-1 Pepr2-3 +Pep2 2h -0.56 >More info -0.45 >More info WT +Pep2 2h Pep2 Original data GEO bulk
43 WT Col-0 Bgh inoculated 0.53 >More info 0.48 >More info WT Col-0 Un-inoculated Original data GEO bulk
44 ice1 control 0.43 >More info 0.58 >More info WT control Original data GEO bulk
45 AFB1 flg22 2h 0.52 >More info 0.48 >More info WT 0h Leaf tissue Original data GEO bulk
46 Red/FR Light45min -0.20 >More info -0.80 >More info FarRed Light 45min Original data Light treatments
47 WT 3h -P 0.40 >More info 0.60 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
48 Laer Flg22+GA 1h 0.53 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
49 AgNO3 3 h 0.56 >More info 0.43 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
50 4C 1h 0.42 >More info 0.57 >More info 4C 0h Original data GEO bulk
51 Laer Flg22 1h 0.51 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
52 Te ozone 0.55 >More info 0.42 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
53 coi1-16 ein2 sid2 ctrl -0.55 >More info -0.42 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
54 GA 0.45 >More info 0.52 >More info none GA Rosette Original data GEO bulk
55 WT 2-4h Xanthomonas 0.40 >More info 0.57 >More info WT T0 Original data GEO bulk
56 Mutant cry1 (High Light) -0.44 >More info -0.52 >More info Col-0 (High Light) Original data GEO bulk
57 cry1 high light -0.44 >More info -0.52 >More info Col-O high light Original data GEO bulk
58 WT-Dry 0.44 >More info 0.52 >More info WT-CK dehydration treatment 1h Original data
59 pmr5 0.40 >More info 0.54 >More info Col-0 Original data GEO bulk
60 wavy 0.50 >More info 0.44 >More info WT Original data GEO bulk
61 WT AntimycinA 3h 0.53 >More info 0.41 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
62 Phaseolicola 2 h (leaf) 0.44 >More info 0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
63 Leaf systemic 0.44 >More info 0.50 >More info Leaf control vegetative leaf Original data GEO bulk
64 hrcC 0.53 >More info 0.40 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
65 coi1-16 ein2 sid2 ozone 0.54 >More info 0.39 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
66 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.43 >More info -0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
67 oligomycin 4 h 0.53 >More info 0.39 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
68 gai Flg22 1h -0.56 >More info -0.36 >More info Laer Flg22 1h leaf discs Original data GEO bulk
69 Col-0 INA 48h 0.38 >More info 0.54 >More info Col-0 MOCK 48h Original data GEO bulk
70 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
71 WT +Pep2 2h 0.56 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
72 HopZ1a treated 0.51 >More info 0.40 >More info col Original data GEO bulk
73 C24 ozone 0.50 >More info 0.41 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
74 WT +elf18 2h 0.41 >More info 0.50 >More info WT untreated elf18 Original data GEO bulk
75 abi1 hypocotyl 0.31 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
76 Chitosan 3h Treatment 0.53 >More info 0.37 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
77 atmyc2 Seedling BL -0.10 >More info -0.80 >More info WT Seedling BL Original data GEO bulk
78 irradiated leaf (cmt 5d) 0.51 >More info 0.38 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
79 CT101 ozone 0.52 >More info 0.37 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
80 Transgenic LEC2GR Seedling 1h Dex 0.39 >More info 0.50 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
81 3x(m) 0.35 >More info 0.54 >More info 2x two week old seedlings Original data
82 atr zebularine 0.57 >More info 0.32 >More info WT zebularine shoot apical meristem Original data
83 mpk6-ko Flg22 4h 0.51 >More info 0.37 >More info mpk6-ko H2O 4h Original data GEO bulk
84 bZIP1ko mutant N+Light- 0.38 >More info 0.50 >More info WT-sib N+Light- whole plant Original data GEO bulk
85 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
86 col-5 hrpA 12h 0.53 >More info 0.34 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
87 ein2-1 9 hpi A. brassicicola 0.52 >More info 0.35 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
88 P.p 10.5hai 0.53 >More info 0.33 >More info At-Control roots Original data GEO bulk
89 ein5-1 ski2-3 0.51 >More info 0.35 >More info Col-0 aerial tissue Original data
90 cat2-long-day 2d -0.52 >More info -0.33 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
91 LTN008-2 aza-dc 0.51 >More info 0.34 >More info LTN012-2 Mock Original data
92 GST NPP1 4 h (leaf) 0.50 >More info 0.35 >More info Mock 4 h (leaf) Original data Elicitor treatments
93 Laer pretreat GA Flg22 1h 0.14 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
94 P.p 6hai 0.54 >More info 0.30 >More info At-Control roots Original data GEO bulk
95 GST 4 h (leaf) 0.33 >More info 0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
96 gai MeJA 1h -0.54 >More info -0.27 >More info Laer MeJA 1h leaf discs Original data GEO bulk
97 bio4-1 mutant leaves 0.52 >More info 0.29 >More info WT leaves leaves Original data GEO bulk
98 long 14-degree- 0.31 >More info 0.50 >More info control long Original data GEO bulk
99 Col in Pi deficiency medium 0.30 >More info 0.51 >More info Col in control medium root Original data GEO bulk
100 1h +Pi -0.29 >More info -0.51 >More info 1h -Pi root Original data GEO bulk
101 myb61 cork 0.25 >More info 0.55 >More info wt cork cork Original data GEO bulk
102 wt systemic wounding 0.26 >More info 0.53 >More info wt control leaves Original data GEO bulk
103 CDB1-Knockout -0.23 >More info -0.56 >More info WT Original data GEO bulk
104 ani1 T0.5 -0.29 >More info -0.50 >More info WT T0.5 root tissue Original data GEO bulk
105 toc1-1-49hr 0.53 >More info 0.25 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
106 Col-0 V. longisporum-inoculated 48 hpi 0.52 >More info 0.25 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
107 Red Light 45min -0.18 >More info -0.59 >More info White Light 45min Original data Light treatments
108 wrky72-1-NOCO2 INFECTED 0.51 >More info 0.25 >More info WT-NOCO2 INFECTED Original data GEO bulk
109 sid2-2 9 hpi A. brassicicola 0.50 >More info 0.25 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
110 ptpks2 0.18 >More info 0.57 >More info Col-WT leaves Original data GEO bulk
111 long 17-degree- 0.23 >More info 0.51 >More info control long Original data GEO bulk
112 estradiole-induced ANAC059 0.17 >More info 0.57 >More info transgenic (empty vector inducible system) Original data GEO bulk
113 long 12-degree- 0.23 >More info 0.50 >More info control long Original data GEO bulk
114 Cold Stress 24 h (root) 0.50 >More info 0.22 >More info Stress mock 24 h (root) Original data Stress treatments
115 WT Bc inoculation 14h 0.50 >More info 0.21 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
116 siliques AtHb1 control 0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
117 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
118 Blue Light 45 min 0.14 >More info 0.56 >More info White Light 45min Original data Light treatments
119 short 17-degree- 0.16 >More info 0.54 >More info control short Original data GEO bulk
120 Blue Light 4 h 0.17 >More info 0.51 >More info White Light 4 h Original data Light treatments
121 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
122 WT 6H Cold 0.51 >More info 0.16 >More info WT control Original data GEO bulk
123 seed germinating in countinuous light 24h SL 0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
124 NJ15 -0.02 >More info -0.65 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
125 col-5 DC3000 12h 0.51 >More info 0.15 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
126 GA3 0.5 h (ga1) -0.05 >More info -0.61 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
127 root - 04% oxygen - 2h -0.15 >More info -0.51 >More info root - 21% oxygen - 2h Original data GEO bulk
128 Shoot apex inflorescence (after bolting) -0.01 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 Mutant sav3-2 (SH) 0.10 >More info 0.51 >More info Col-0 (SH) Original data GEO bulk
130 sav3-2 shade 0.10 >More info 0.51 >More info Col-0 shade seedlings Original data GEO bulk
131 CCA1-ox 6am non-polysomal 0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
132 xyl-grown cell culture- 1h 1mM Suc 0.07 >More info -0.58 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
133 toc1-1-77hr 0.50 >More info -0.03 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
134 seedling -S Exp 0.08 >More info -0.52 >More info seedling FN Exp seedling Original data
135 P. infestans 6 h (leaf) 0.51 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
136 seedling h S Exp -0.29 >More info 0.55 >More info seedling -S Exp seedling Original data