4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on amiRAP hypoxic
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List of experiments correlated with "amiRAP hypoxic"  Help Download transcriptome of top 30
Score Experiment Correlation from
amiRAP hypoxic		 Correlation to
amiRAP hypoxic		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 amiRAP hypoxic 1.00 >More info 1.00 >More info hypoxic hypoxia Original data GEO bulk
2 HARAP hypoxic 0.82 >More info 0.77 >More info hypoxic hypoxia Original data GEO bulk
3 hypoxic -0.77 >More info -0.79 >More info WT aerobic hypoxia Original data GEO bulk
4 Ba1 UV -0.71 >More info -0.72 >More info Ba1 mock UV seedling Original data
5 ERF96OE -0.63 >More info -0.57 >More info WT leaf Original data
6 treated group -0.58 >More info -0.59 >More info Control group Original data
7 bri1-116 0.44 >More info 0.73 >More info Col seedling Original data GEO bulk
8 apk1 apk2 -0.73 >More info -0.43 >More info Col0-control whole rosette Original data GEO bulk
9 shoots bhlh100/101 100uM Fe 0.58 >More info 0.53 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
10 SA 4mM -0.56 >More info -0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
11 Homozygous-AtcesA6 -0.54 >More info -0.55 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
12 DC3000 2 h (leaf) -0.58 >More info -0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
13 Col-0 flu HL 3h -0.67 >More info -0.41 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
14 amiRAP aerobic 0.60 >More info 0.45 >More info WT aerobic aerobic Original data GEO bulk
15 NJ15 -0.34 >More info -0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
16 WT Shoot Hypoxia -0.36 >More info -0.68 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
17 root - 01% oxygen - 2h -0.37 >More info -0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
18 Botrytis cinerea 48h -0.59 >More info -0.43 >More info control 48h Original data GEO bulk
19 Shoot apex inflorescence (after bolting) 0.36 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 cat2-2; 8h switch to ambient CO2 concentrations; -0.63 >More info -0.37 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
21 B.cinerea 18 h infection -0.63 >More info -0.37 >More info Mock 18 h Original data Botrytis cinerea infection
22 Botrytis cinerea 18h -0.63 >More info -0.37 >More info control 18h Original data GEO bulk
23 gai Control -0.60 >More info -0.38 >More info Laer Control leaf discs Original data GEO bulk
24 MPK6 ox Shoot Hypoxia -0.35 >More info -0.60 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
25 PBZ -0.64 >More info -0.30 >More info none PBZ Rosette Original data GEO bulk
26 Time-0 chr11-1chr17-1 0.73 >More info 0.21 >More info Time-0 Col-0 leaf explants Original data
27 Homozygous-AtcesA4 -0.41 >More info -0.53 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
28 essp4/sdg8-5 mutant -0.66 >More info -0.27 >More info wild type leaf Original data GEO bulk
29 S15-118 -0.60 >More info -0.33 >More info wt Original data GEO bulk
30 Laer pretreat GA+JA Flg22 1h -0.66 >More info -0.26 >More info Laer pretreat water control leaf discs Original data GEO bulk
31 Laer pretreat GA+JA Flg22 2h -0.67 >More info -0.25 >More info Laer pretreat water control leaf discs Original data GEO bulk
32 low water potential -0.56 >More info -0.36 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
33 IMI 4mM -0.52 >More info -0.39 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
34 Shoot -Cs -0.58 >More info -0.33 >More info Control-shoot Original data GEO bulk
35 Laer pretreat GA+JA Flg22 0h -0.67 >More info -0.23 >More info Laer pretreat water control leaf discs Original data GEO bulk
36 IRP1-OE-Fe--shoot -0.52 >More info -0.38 >More info COL-0-Fe--shoot shoot Original data
37 PAHs stress -0.62 >More info -0.28 >More info exp control phenanthrene whole plants Original data GEO bulk
38 FarRed Light 45min 0.39 >More info 0.51 >More info White Light 45min Original data Light treatments
39 del1-1 mutant 5d uninfected -0.57 >More info -0.32 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
40 Differentiation 12h -0.60 >More info -0.29 >More info Differentiation 0h leaves Original data
41 RPL18 TuMV inoculated total RNA -0.60 >More info -0.28 >More info mock inoculated total RNA PO Original data GEO bulk
42 IRP1-OE-Ctrl--shoot -0.60 >More info -0.28 >More info COL-0-Ctrl--shoot shoot Original data
43 AtMYB30-ox 2-4h Xanthomonas -0.57 >More info -0.31 >More info WT 2-4h Xanthomonas Original data GEO bulk
44 WT 1wk -P -0.55 >More info -0.32 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
45 miR393 0h 0.59 >More info 0.28 >More info WT 0h Leaf tissue Original data GEO bulk
46 Hydrogen Peroxide 500 uM -0.24 >More info -0.62 >More info Control RB and PER Hydrogen Peroxide Original data
47 Red/FR Light45min -0.03 >More info -0.82 >More info FarRed Light 45min Original data Light treatments
48 Col ozone 2d -0.53 >More info -0.31 >More info Col clean-air 2d ozone Original data GEO bulk
49 Got7 UV -0.34 >More info -0.50 >More info Got7 mock UV seedling Original data
50 WT light 0.53 >More info 0.30 >More info WT dark Original data GEO bulk
51 estradiole-induced ANAC059 0.14 >More info 0.69 >More info transgenic (empty vector inducible system) Original data GEO bulk
52 aba3-1 -0.53 >More info -0.29 >More info wt Original data GEO bulk
53 S58-2 -0.56 >More info -0.26 >More info wt Original data GEO bulk
54 Laer treat paclobutrazol (PAC) -0.54 >More info -0.28 >More info Laer Control leaf discs Original data GEO bulk
55 CMP 24hr -0.56 >More info -0.26 >More info Acetone 24hr root Original data GEO bulk
56 penta Flg22 1h -0.69 >More info -0.13 >More info Laer Flg22 1h leaf discs Original data GEO bulk
57 Laer pretreat JA Flg22 2h -0.60 >More info -0.22 >More info Laer pretreat water control leaf discs Original data GEO bulk
58 WT Red light 1h -0.68 >More info -0.13 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
59 Leafminer locally damaged thaliana seedlings -0.58 >More info -0.23 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
60 brm-101 -0.52 >More info -0.28 >More info Ler Original data GEO bulk
61 CLO 4mM -0.50 >More info -0.29 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
62 gh3.5-1D 48 hpi -0.50 >More info -0.29 >More info Col-0 uninoculated Original data GEO bulk
63 triploid female excess 0.28 >More info 0.51 >More info tetraploid Original data GEO bulk
64 penta MeJA 1h -0.51 >More info -0.27 >More info Laer MeJA 1h leaf discs Original data GEO bulk
65 bio4-1 mutant watered00µM biotin leaves 0.67 >More info 0.11 >More info bio4-1 mutant leaves leaves Original data GEO bulk
66 col-5 DC3000 12h -0.54 >More info -0.24 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
67 sdg8-2 mutant -0.54 >More info -0.24 >More info wild type leaf Original data GEO bulk
68 35S:PCO1 hypoxia 0.22 >More info 0.56 >More info WT hypoxia whole rosette Original data
69 Laer pretreat GA Flg22 0h -0.71 >More info -0.06 >More info Laer pretreat water control leaf discs Original data GEO bulk
70 Col-0 under 4 days salt -0.50 >More info -0.27 >More info Col-0 under control 4 days salt treatment rosette Original data
71 vte2-1 3d vernalization -0.58 >More info -0.19 >More info WT 3d vernalization Original data GEO bulk
72 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.52 >More info -0.25 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
73 Tsu -Fe 24h Shoots -0.62 >More info -0.15 >More info Tsu +Fe 24h Shoots Original data GEO bulk
74 Phaseolicola 2 h (leaf) -0.54 >More info -0.22 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
75 ein2-1 9 hpi A. brassicicola -0.51 >More info -0.25 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
76 det2 light-dark 0.55 >More info 0.21 >More info det2 light light-dark Original data GEO bulk
77 ulp1c ulp1d +Pto -0.50 >More info -0.26 >More info ulp1c ulp1d mock Original data GEO bulk
78 upf3 -0.61 >More info -0.15 >More info WT whole plant Original data GEO bulk
79 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
80 Laer pretreat GA Flg22 2h -0.66 >More info -0.09 >More info Laer pretreat water control leaf discs Original data GEO bulk
81 oas-a1.1 Cd 24h -0.50 >More info -0.25 >More info Cd 24h root Shoot Original data GEO bulk
82 Pto inoculated -0.50 >More info -0.25 >More info col Original data GEO bulk
83 rGRF -0.55 >More info -0.20 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
84 pvip1 pvip2 -0.59 >More info -0.16 >More info Col-0 whole rosettes Original data GEO bulk
85 SLWF infested -0.61 >More info -0.14 >More info SLWF uninfested rosette tissue Original data GEO bulk
86 Tsu -Fe 48h Shoots -0.51 >More info -0.23 >More info Tsu +Fe 24h Shoots Original data GEO bulk
87 shoot hypoxia total -0.11 >More info -0.63 >More info shoot control total Original data GEO bulk
88 Laer Flg22 2h -0.56 >More info -0.17 >More info Laer Control leaf discs Original data GEO bulk
89 penta Control -0.64 >More info -0.09 >More info Laer Control leaf discs Original data GEO bulk
90 M6PR transgenic leaf 100mM NaCl 0.54 >More info 0.19 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
91 GSH -0.57 >More info -0.16 >More info control GSH treated seedlings Original data GEO bulk
92 Chitosan 3h Treatment -0.65 >More info -0.08 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
93 10min Reillumination Total RNA 0.19 >More info 0.54 >More info 1h Dark Total RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
94 col-5 hrpA 12h -0.55 >More info -0.17 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
95 Cocultivation 8 hrs leaf 0.52 >More info 0.20 >More info Mock cocultivation 8 hrs leaf Leaf Original data
96 Col-0 9 hpi A. brassicicola -0.52 >More info -0.20 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
97 des1 water -0.51 >More info -0.21 >More info WT water water leaf Original data GEO bulk
98 ex1ex2flu dark 8hours/30 minute light 0.60 >More info 0.11 >More info col dark 8hours/30 minute light Original data GEO bulk
99 RPL18 TuMV inoculated polysomal RNA -0.50 >More info -0.21 >More info mock inoculated polysomal RNA PO Original data GEO bulk
100 GST-overexpression seedlings control -0.64 >More info -0.07 >More info WT seedlings control Seedlings Original data
101 Sulfometuron EC50 -0.51 >More info -0.20 >More info Carrier Original data GEO bulk
102 TiO2 germinant 0.54 >More info 0.15 >More info Millipore Water germinant TiO2 seedling Original data
103 WT Bc inoculation 14h -0.53 >More info -0.16 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
104 35S:RPS4 eds1-2 24h 0.53 >More info 0.16 >More info 35S:RPS4 24h leaves Original data
105 Differentiation 24h -0.52 >More info -0.17 >More info Differentiation 0h leaves Original data
106 KCl germinant 0.51 >More info 0.18 >More info Millipore Water germinant KCl seedling Original data
107 erf104-ko Flg22 4h -0.63 >More info -0.05 >More info erf104-ko H2O 4h Original data GEO bulk
108 hrpA 7h -0.56 >More info -0.12 >More info Mock 7h hrpA Original data GEO bulk
109 Shoot -K -0.51 >More info -0.17 >More info Control-shoot Original data GEO bulk
110 K starvation (shoot) -0.51 >More info -0.17 >More info Ws (shoot) Original data GEO bulk
111 pif3 Dark 0h 0.50 >More info 0.18 >More info WT Dark 0h etiolated seedling Original data GEO bulk
112 agb1 gpa1 +ABA LF 0.62 >More info 0.06 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
113 ANOXIA 0.06 >More info -0.74 >More info ANOXIA+SUCROSE Original data GEO bulk
114 pepr1-1 Pepr2-3 +Pep2 10h 0.50 >More info 0.17 >More info WT +Pep2 10h Pep2 Original data GEO bulk
115 php 0.51 >More info 0.16 >More info WT Original data GEO bulk
116 Mutant sav3-2 (WL) 0.10 >More info 0.57 >More info Col-0 (WL) Original data GEO bulk
117 sav3-2 light 0.10 >More info 0.57 >More info Col-0 light seedlings Original data GEO bulk
118 24h volatiles Sp. HRO-C48 0.55 >More info 0.11 >More info 24h untreated whole seedling Original data GEO bulk
119 abi4 vtc2 (I) -0.56 >More info -0.10 >More info Col (I) rosette Original data GEO bulk
120 col-5 hrpA 2h -0.59 >More info -0.07 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
121 DFPM -0.58 >More info -0.08 >More info control Original data GEO bulk
122 Laer pretreat JA Flg22 1h -0.51 >More info -0.14 >More info Laer pretreat water control leaf discs Original data GEO bulk
123 mil4 sid2 0.51 >More info 0.14 >More info Col rosettes Original data GEO bulk
124 pmr5 pmr6 -0.55 >More info -0.10 >More info Col-0 Original data GEO bulk
125 WT powdery mildew -0.56 >More info -0.09 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
126 AvrRpm1 2 h (leaf) -0.59 >More info -0.06 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
127 GST NPP1 4 h (leaf) -0.58 >More info -0.07 >More info Mock 4 h (leaf) Original data Elicitor treatments
128 Te ozone -0.57 >More info -0.08 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
129 R. solani AG2-1 -0.56 >More info -0.08 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
130 Shoot P recovery -0.55 >More info -0.09 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
131 penta Flg22 2h -0.56 >More info -0.07 >More info Laer Flg22 2h leaf discs Original data GEO bulk
132 Col whole leaf 5dpi -0.54 >More info -0.09 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
133 Differentiation 36h -0.54 >More info -0.08 >More info Differentiation 0h leaves Original data
134 Laer GA 1h -0.59 >More info -0.03 >More info Laer Control leaf discs Original data GEO bulk
135 Light 3day hml -0.06 >More info -0.55 >More info 0h hml Original data
136 root - 04% oxygen - 2h 0.07 >More info -0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
137 Shoot -P 0.63 >More info -0.02 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
138 HairpinZ 4 h (leaf) -0.58 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
139 Col whole leaf 7dpi -0.51 >More info -0.10 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
140 Col whole leaf amplified 5 dpi -0.58 >More info -0.03 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
141 irradiated leaf (cmt 1d) -0.57 >More info -0.03 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
142 Dex-rga(delta17) 2h GA4+DEX 0.51 >More info 0.09 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
143 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
144 roottip hypoxia total -0.10 >More info -0.50 >More info roottip control total Original data GEO bulk
145 col-5 DC3000-avrRpm 4h -0.54 >More info -0.05 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
146 WT no Pi -0.53 >More info -0.06 >More info WT complete seedlings Original data
147 P.syringae AvrRpt2 4 h (leaf) -0.51 >More info -0.07 >More info Mock 4 h (leaf) Original data Elicitor treatments
148 35S:RPS4 eds1-2 8h 0.52 >More info 0.06 >More info 35S:RPS4 8h leaves Original data
149 cpr5scv1 -0.58 >More info -0.00 >More info WT(COL) Original data GEO bulk
150 gpa1-4/agb1-2 ozone 2d 0.58 >More info 0.00 >More info Col ozone 2d ozone Original data GEO bulk
151 penta Alternaria 3dpi -0.50 >More info -0.08 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
152 cat2-short-day 4d 0.00 >More info -0.58 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
153 CCA1-ox 6am non-polysomal 0.06 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
154 ORS1 induced -0.51 >More info -0.05 >More info mock-induced rosette leaves Original data GEO bulk
155 Total RNA 35S:AtCSP1-FH1 cold -0.56 >More info 0.00 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
156 arf2 brz 0.51 >More info 0.05 >More info arf2 mock Original data GEO bulk
157 tmm1-inflorescence-tips -0.52 >More info -0.03 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
158 efr-1 +elf18 10h 0.53 >More info 0.02 >More info WT +elf18 10h elf18 Original data GEO bulk
159 Flagellin 4 h (leaf) -0.55 >More info 0.00 >More info Mock 4 h (leaf) Original data Elicitor treatments
160 GA3 0.5 h (ga1) 0.07 >More info -0.62 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
161 Col-0 wt Hypoxic -0.01 >More info -0.54 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
162 GRX-overexpression seedlings control -0.62 >More info 0.08 >More info WT seedlings control Seedlings Original data GEO bulk
163 Col-0 24hpi A. brassicicola -0.56 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
164 OH1 -0.57 >More info 0.04 >More info Col-0 leaves Original data GEO bulk
165 C24 ozone -0.51 >More info -0.00 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
166 MPK6 ox Root Hypoxia -0.00 >More info -0.51 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
167 root - 08% oxygen - 2h 0.16 >More info -0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
168 atmyc2 Seedling BL 0.19 >More info -0.68 >More info WT Seedling BL Original data GEO bulk
169 WT-NOCO2 INFECTED -0.50 >More info 0.01 >More info WT-MOCK Original data GEO bulk
170 Atwrky63 0.59 >More info -0.11 >More info Col0 none leaf Original data GEO bulk
171 WT Root Hypoxia 0.15 >More info -0.63 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
172 root - 08% oxygen - 30min 0.22 >More info -0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
173 S14-150 -0.52 >More info 0.07 >More info wt Original data GEO bulk
174 root - 04% oxygen - 30min 0.14 >More info -0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
175 upf1 -0.51 >More info 0.07 >More info WT whole plant Original data GEO bulk
176 Polysomal RNA 35S:AtCSP1-FH1 cold -0.51 >More info 0.10 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
177 root - 04% oxygen - 48h 0.30 >More info -0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
178 gpa1 +ABA GC 0.50 >More info -0.18 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
179 35S:GIF 0.19 >More info -0.51 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
180 Col BTH -0.37 >More info 0.67 >More info Col rosettes Original data GEO bulk
181 Heat shock optimum -0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
182 siliques AtHb1 control -0.33 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
183 HARAP aerobic 0.33 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
184 Col0-PsmES4326-24hpi -0.51 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
185 Leafminer damaged seedlings -0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
186 Laer pretreat GA Flg22 1h -0.70 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk