4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on hypoxic
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List of experiments correlated with "hypoxic"  Help Download transcriptome of top 30
Score Experiment Correlation from
hypoxic		 Correlation to
hypoxic		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 hypoxic 1.00 >More info 1.00 >More info WT aerobic hypoxia Original data GEO bulk
2 amiRAP hypoxic -0.79 >More info -0.77 >More info hypoxic hypoxia Original data GEO bulk
3 WT Shoot Hypoxia 0.50 >More info 0.76 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
4 DC3000 2 h (leaf) 0.57 >More info 0.68 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
5 HARAP hypoxic -0.60 >More info -0.63 >More info hypoxic hypoxia Original data GEO bulk
6 MPK6 ox Shoot Hypoxia 0.52 >More info 0.71 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
7 Shoot -Cs 0.53 >More info 0.68 >More info Control-shoot Original data GEO bulk
8 Homozygous-AtcesA4 0.57 >More info 0.64 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
9 low water potential 0.63 >More info 0.54 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
10 rosettes drought 0.56 >More info 0.60 >More info rosettes watered Original data GEO bulk
11 NJ15 0.36 >More info 0.80 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
12 shl-2 Pool -0.57 >More info -0.59 >More info Ler Pool seedling Original data GEO bulk
13 M6PR transgenic leaf 0mM NaCl -0.57 >More info -0.59 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
14 Red/FR Light45min 0.25 >More info 0.89 >More info FarRed Light 45min Original data Light treatments
15 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.56 >More info 0.57 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
16 estradiole-induced ANAC059 -0.42 >More info -0.71 >More info transgenic (empty vector inducible system) Original data GEO bulk
17 IRP1-OE-Ctrl--shoot 0.58 >More info 0.54 >More info COL-0-Ctrl--shoot shoot Original data
18 shoot hypoxia total 0.47 >More info 0.65 >More info shoot control total Original data GEO bulk
19 Botrytis cinerea 48h 0.48 >More info 0.63 >More info control 48h Original data GEO bulk
20 root - 08% oxygen - 30min 0.38 >More info 0.72 >More info root - 21% oxygen - 30min Original data GEO bulk
21 WT H2O2 3h 0.52 >More info 0.56 >More info WT water 3h 3h_H2O2 Original data GEO bulk
22 cell culture 4 h phytoprostane A1 0.50 >More info 0.58 >More info cell culture 4 h control Original data GEO bulk
23 root endodermis and quiescent center 40 mM NaCl 0.43 >More info 0.64 >More info root endodermis and quiescent center Original data GEO bulk
24 apk1 apk2 0.48 >More info 0.59 >More info Col0-control whole rosette Original data GEO bulk
25 IMI 4mM 0.41 >More info 0.65 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
26 Homozygous-AtcesA6 0.45 >More info 0.59 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
27 Cor 24h 0.39 >More info 0.65 >More info Mock 24h Cor Original data GEO bulk
28 Col-O high light 0.56 >More info 0.47 >More info Col-O bule light Original data GEO bulk
29 B.cinerea 18 h infection 0.51 >More info 0.52 >More info Mock 18 h Original data Botrytis cinerea infection
30 Botrytis cinerea 18h 0.51 >More info 0.52 >More info control 18h Original data GEO bulk
31 dor drought 0.22 >More info 0.81 >More info WT drought Original data GEO bulk
32 light-hs 0.49 >More info 0.54 >More info light-control seedling Original data
33 det2 light-dark -0.57 >More info -0.45 >More info det2 light light-dark Original data GEO bulk
34 Col-0 drought 0.53 >More info 0.49 >More info Col-0 control Original data GEO bulk
35 Col(gl) 0mM NaCl -0.52 >More info -0.49 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
36 Col-0 flu HL 3h 0.54 >More info 0.47 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
37 Col(gl) leaf 0mM NaCl -0.52 >More info -0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
38 35S::PI ap3-3 35S::AP-GR +DEX 0.46 >More info 0.55 >More info 0hr DEX Original data GEO bulk
39 ARR22-ox 0.52 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
40 seedling 1.5h after Gamma atm-1 0.50 >More info 0.50 >More info seedling day 1 unirradiated atm-1 1.5h Original data
41 FarRed Light 45min -0.30 >More info -0.69 >More info White Light 45min Original data Light treatments
42 roottip hypoxia total 0.41 >More info 0.58 >More info roottip control total Original data GEO bulk
43 Laer treat paclobutrazol (PAC) 0.46 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
44 Fenclorim 4hr 0.46 >More info 0.53 >More info Acetone 4hr root Original data GEO bulk
45 Col ozone 2d 0.41 >More info 0.58 >More info Col clean-air 2d ozone Original data GEO bulk
46 AsAKiin11 T2 0.43 >More info 0.56 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
47 root longitudinal zone-3 NaCl 0.46 >More info 0.52 >More info root longitudinal zone-3 Original data GEO bulk
48 Col-0 wt Hypoxic 0.40 >More info 0.57 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
49 24h volatiles Sm. R3089 -0.42 >More info -0.55 >More info 24h untreated whole seedling Original data GEO bulk
50 ABA 1 h 0.33 >More info 0.63 >More info Mock 1 h Original data Basic hormone treatment of seedlings
51 root - 04% oxygen - 2h 0.10 >More info 0.86 >More info root - 21% oxygen - 2h Original data GEO bulk
52 root - 01% oxygen - 48h 0.35 >More info 0.61 >More info root - 21% oxygen - 48h Original data GEO bulk
53 Seedling KUA1-IOX est 0.37 >More info 0.59 >More info Seedling KUA1-IOX mock Original data
54 RPL18 TuMV inoculated total RNA 0.39 >More info 0.56 >More info mock inoculated total RNA PO Original data GEO bulk
55 Tsu -Fe 48h Shoots 0.52 >More info 0.43 >More info Tsu +Fe 24h Shoots Original data GEO bulk
56 Col0-PsmES4326-24hpi 0.34 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
57 Stem tissue 5 days NAA 0.37 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
58 Aerobic e1 ate2 0.26 >More info 0.67 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
59 4C 1h -0.40 >More info -0.53 >More info 4C 0h Original data GEO bulk
60 Col leaf scrape 5 dpi 0.52 >More info 0.41 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
61 myb61 cork -0.41 >More info -0.52 >More info wt cork cork Original data GEO bulk
62 9 hr Hypoxia IP RNA 0.52 >More info 0.40 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
63 essp4/sdg8-5 mutant 0.53 >More info 0.39 >More info wild type leaf Original data GEO bulk
64 sdg8-2 mutant 0.54 >More info 0.38 >More info wild type leaf Original data GEO bulk
65 Col-0 SA 0.51 >More info 0.41 >More info Col-0 water complete seedling Original data
66 Propiconazole 12 h 0.36 >More info 0.55 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
67 60m light 0.40 >More info 0.51 >More info before light whole seedlings Original data GEO bulk
68 nhx5-2/nhx6 0.39 >More info 0.52 >More info WT Rosette leaf Original data GEO bulk
69 Phytoprostane A1 4 h 0.41 >More info 0.50 >More info Col-0 Original data GEO bulk
70 ebs Pool -0.50 >More info -0.40 >More info Ler Pool seedling Original data GEO bulk
71 9 hr Hypoxia Total RNA 0.52 >More info 0.38 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
72 Col-0 HS 0.39 >More info 0.51 >More info Col-0 control heat shocked seedling Original data GEO bulk
73 WT (Col-0) heat shock 0.39 >More info 0.51 >More info WT (Col-0) whole seedling Original data GEO bulk
74 WT Root Hypoxia 0.31 >More info 0.59 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
75 Osmotic Stress 24 h (shoot) 0.39 >More info 0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
76 treated group 0.37 >More info 0.52 >More info Control group Original data
77 GO5; harvested 8h continiously maintained in high
CO2;		 -0.36 >More info -0.53 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
78 ex1 flu dark 8hours/30 minute light -0.31 >More info -0.58 >More info col dark 8hours/30 minute light Original data GEO bulk
79 root - 01% oxygen - 2h 0.18 >More info 0.71 >More info root - 21% oxygen - 2h Original data GEO bulk
80 Prohexadione 12 h 0.32 >More info 0.56 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
81 WT salt 12 h 0.52 >More info 0.36 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
82 Heat shock optimum 0.23 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
83 Brassinolide 3 h (det2) -0.37 >More info -0.50 >More info Mock 3 h (det2) Original data Basic hormone treatment of seedlings
84 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
85 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
86 Cambium 5 days NAA 0.33 >More info 0.53 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
87 cat2-short-day 4d 0.30 >More info 0.55 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
88 4C 2h(SOIL) -0.29 >More info -0.56 >More info 4C 0h(SOIL) Original data GEO bulk
89 myb61 xylem -0.26 >More info -0.59 >More info wt xylem xylem Original data GEO bulk
90 root - 08% oxygen - 48h 0.12 >More info 0.72 >More info root - 21% oxygen - 48h Original data GEO bulk
91 gpa1 -ABA GC -0.24 >More info -0.60 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
92 Blue Light 45 min -0.15 >More info -0.68 >More info White Light 45min Original data Light treatments
93 MPK6 ox Root Hypoxia 0.31 >More info 0.52 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
94 npr1-3 DCA 48h 0.25 >More info 0.57 >More info npr1-3 MOCK 48h Original data GEO bulk
95 Hydrogen Peroxide 500 uM 0.22 >More info 0.60 >More info Control RB and PER Hydrogen Peroxide Original data
96 Ba1 UV 0.14 >More info 0.67 >More info Ba1 mock UV seedling Original data
97 root - 08% oxygen - 2h 0.04 >More info 0.77 >More info root - 21% oxygen - 2h Original data GEO bulk
98 root - 04% oxygen - 48h 0.11 >More info 0.70 >More info root - 21% oxygen - 48h Original data GEO bulk
99 gpa1-4/agb1-2 ozone 2d -0.28 >More info -0.51 >More info Col ozone 2d ozone Original data GEO bulk
100 oas-a1.1 root 0.17 >More info 0.61 >More info WT-Untreated Root Original data GEO bulk
101 root - 04% oxygen - 30min 0.08 >More info 0.68 >More info root - 21% oxygen - 30min Original data GEO bulk
102 Leafminer damaged seedlings 0.20 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
103 opr3 OPDA 0.5 h -0.19 >More info -0.56 >More info opr3 0 h Original data GEO bulk
104 cpr5 0.25 >More info 0.50 >More info WT(COL) Original data GEO bulk
105 Truncated AC2 T1 -0.52 >More info -0.21 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
106 bri1-116 0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
107 Aerobic prt6 0.14 >More info 0.56 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
108 2hr continuous KNO3 PeR cell -0.11 >More info -0.58 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
109 root longitudinal zone-1 NaCl 0.19 >More info 0.50 >More info root longitudinal zone-1 Original data GEO bulk
110 35S:RPS4 eds1-2 2h 0.18 >More info 0.51 >More info 35S:RPS4 2h leaves Original data
111 seed germinating in countinuous light 24h SL 0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
112 35S:PCO1 hypoxia -0.10 >More info -0.58 >More info WT hypoxia whole rosette Original data
113 ex2 flu dark 8hours/30 minute light -0.11 >More info -0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
114 atmyc2 Seedling BL -0.02 >More info 0.68 >More info WT Seedling BL Original data GEO bulk
115 Col BTH -0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
116 HARAP aerobic 0.11 >More info 0.53 >More info WT aerobic aerobic Original data GEO bulk
117 ANAC102 over-expressor 0.11 >More info 0.51 >More info C24 Original data GEO bulk
118 ANOXIA -0.03 >More info 0.63 >More info ANOXIA+SUCROSE Original data GEO bulk
119 root - 01% oxygen - 30min 0.04 >More info 0.53 >More info root - 21% oxygen - 30min Original data GEO bulk
120 SA 3h 0.02 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
121 GA3 0.5 h (ga1) -0.03 >More info 0.58 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
122 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
123 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
124 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data