4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Cambium 5 days NAA
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Cambium 5 days NAA"  Help Download transcriptome of top 30
Score Experiment Correlation from
Cambium 5 days NAA		 Correlation to
Cambium 5 days NAA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Cambium 5 days NAA 1.00 >More info 1.00 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
2 Stem tissue 5 days NAA 0.90 >More info 0.93 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
3 Stem tissue 2 days NAA 0.74 >More info 0.85 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
4 Starch sheath 2 days NAA 0.68 >More info 0.75 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
5 Starch sheath 2 days MS incubation 0.70 >More info 0.68 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
6 tumour 0.71 >More info 0.66 >More info non-tumor tumour Original data GEO bulk
7 C58 35dpi 0.69 >More info 0.65 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
8 Starch sheath 5 days MS incubation 0.59 >More info 0.65 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
9 Differentiation 12h 0.61 >More info 0.58 >More info Differentiation 0h leaves Original data
10 Col0-PsmES4326-24hpi 0.56 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
11 C58 6dpi 0.66 >More info 0.50 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
12 B.cinerea 18 h infection 0.50 >More info 0.65 >More info Mock 18 h Original data Botrytis cinerea infection
13 Botrytis cinerea 18h 0.50 >More info 0.65 >More info control 18h Original data GEO bulk
14 Differentiation 24h 0.56 >More info 0.53 >More info Differentiation 0h leaves Original data
15 35S::HRE2 Aerobic -0.43 >More info -0.66 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
16 root - 04% oxygen - 2h 0.35 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
17 GV3101 6dpi 0.65 >More info 0.43 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
18 aerial organ callus inducing medium 96 h 0.63 >More info 0.45 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
19 PAHs stress 0.63 >More info 0.44 >More info exp control phenanthrene whole plants Original data GEO bulk
20 root - 08% oxygen - 2h 0.28 >More info 0.79 >More info root - 21% oxygen - 2h Original data GEO bulk
21 pnp1-1 3h +P 0.57 >More info 0.50 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
22 Col BTH 0.38 >More info 0.67 >More info Col rosettes Original data GEO bulk
23 AsAKiin11 T1 0.52 >More info 0.52 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
24 msh1 albino 0.58 >More info 0.46 >More info WT aerial part Original data GEO bulk
25 siliques AtHb1 control 0.51 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
26 Differentiation 36h 0.50 >More info 0.53 >More info Differentiation 0h leaves Original data
27 E.coli TUV86 2 fliC 7h 0.59 >More info 0.43 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
28 E.coli 0157 H7 7h 0.54 >More info 0.47 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
29 albino Ds13-2198-1 -0.53 >More info -0.48 >More info control Original data GEO bulk
30 Col-0 low oxygen 0.54 >More info 0.47 >More info Col-0 Original data GEO bulk
31 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.61 >More info 0.40 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
32 hrpA fliC 7h 0.53 >More info 0.47 >More info Mock 7h hrpA fliC Original data GEO bulk
33 Differentiation 48h 0.48 >More info 0.52 >More info Differentiation 0h leaves Original data
34 sta1 0.60 >More info 0.38 >More info WT Original data GEO bulk
35 Laer pretreat GA Flg22 1h 0.27 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
36 root - 08% oxygen - 48h 0.37 >More info 0.60 >More info root - 21% oxygen - 48h Original data GEO bulk
37 CAX1/CAX3 mutant 0.44 >More info 0.53 >More info Col whole plant Original data GEO bulk
38 Seedling KUA1-IOX est 0.51 >More info 0.45 >More info Seedling KUA1-IOX mock Original data
39 Aerobic prt6 0.43 >More info 0.53 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
40 Callus 0.55 >More info 0.40 >More info Control for tissue data callus Original data GEO bulk
41 mkk1/mkk2 control rep 0.56 >More info 0.39 >More info Col-0 Time 0 rep Original data GEO bulk
42 Cor 10h 0.58 >More info 0.37 >More info Mock 10h Cor Original data GEO bulk
43 35S::PI ap3-3 35S::AP-GR +DEX 0.38 >More info 0.56 >More info 0hr DEX Original data GEO bulk
44 S58-2 0.59 >More info 0.35 >More info wt Original data GEO bulk
45 root - 01% oxygen - 48h 0.40 >More info 0.53 >More info root - 21% oxygen - 48h Original data GEO bulk
46 lht1 PstDC3000 48h 0.52 >More info 0.40 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
47 aerial organ callus inducing medium 48 h 0.54 >More info 0.38 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
48 MPK6 ox Shoot Hypoxia 0.36 >More info 0.56 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
49 Col-0 SA 0.58 >More info 0.33 >More info Col-0 water complete seedling Original data
50 LTN008-2 aza-dc 0.54 >More info 0.36 >More info LTN012-2 Mock Original data
51 Light 3day wt -0.38 >More info -0.52 >More info 0h wt Original data
52 AvrRpt2 Col-0 6hpi 0.59 >More info 0.31 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
53 Laer treat paclobutrazol (PAC) 0.57 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
54 Mature callus 0.55 >More info 0.34 >More info Young callus hypocotyls Original data GEO bulk
55 Heat shock optimum 0.24 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
56 35S:RPS4 eds1-2 24h -0.54 >More info -0.34 >More info 35S:RPS4 24h leaves Original data
57 Shoot -Cs 0.36 >More info 0.52 >More info Control-shoot Original data GEO bulk
58 hrpA 7h 0.56 >More info 0.31 >More info Mock 7h hrpA Original data GEO bulk
59 hypoxic 0.53 >More info 0.33 >More info WT aerobic hypoxia Original data GEO bulk
60 aba3-1 0.51 >More info 0.35 >More info wt Original data GEO bulk
61 Aerobic e1 ate2 0.24 >More info 0.62 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
62 mkk1/mkk2 24h BTH rep 0.54 >More info 0.31 >More info Col-0 24h BTH rep Original data GEO bulk
63 seed germinating in countinuous light 24h SL 0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
64 pnp1-1 1wk -P 0.59 >More info 0.26 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
65 pnp1-1 1wk +P 0.54 >More info 0.30 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
66 col-5 hrpA 12h 0.54 >More info 0.30 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
67 coi1-16 ein2 sid2 ctrl -0.60 >More info -0.24 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
68 long 12-degree- 0.52 >More info 0.31 >More info control long Original data GEO bulk
69 HopZ1a treated 0.54 >More info 0.29 >More info col Original data GEO bulk
70 C24 ozone 0.62 >More info 0.21 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
71 ARR22-ox (t-zeatin 3 h) 0.61 >More info 0.22 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
72 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.32 >More info WT light Original data GEO bulk
73 ice1 control 0.57 >More info 0.25 >More info WT control Original data GEO bulk
74 Te ozone 0.57 >More info 0.25 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
75 CT101 ozone 0.61 >More info 0.20 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
76 PBZ 0.53 >More info 0.28 >More info none PBZ Rosette Original data GEO bulk
77 Leaf GLU1-KO 0.52 >More info 0.29 >More info Leaf Col(0) rosette leaves Original data GEO bulk
78 pnp1-1 3h -P 0.52 >More info 0.29 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
79 wrky33 Bc inoculation 14h 0.59 >More info 0.22 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
80 shoots bhlh100/101 0uM Fe 0.60 >More info 0.21 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
81 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.59 >More info 0.22 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
82 Col-0 9 hpi A. brassicicola 0.57 >More info 0.24 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
83 DFPM 0.58 >More info 0.23 >More info control Original data GEO bulk
84 NAA -AA 0.55 >More info 0.25 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
85 TiO2 germinant -0.56 >More info -0.23 >More info Millipore Water germinant TiO2 seedling Original data
86 WT Bc inoculation 14h 0.52 >More info 0.27 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
87 ice1 24H Cold 0.50 >More info 0.29 >More info WT 24H Cold Original data GEO bulk
88 pad4-PsmES4326-24hpi -0.54 >More info -0.25 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
89 Botrytis cinerea 48h 0.54 >More info 0.25 >More info control 48h Original data GEO bulk
90 UV 0.53 >More info 0.26 >More info WT aerial region Original data GEO bulk
91 upf3 0.53 >More info 0.26 >More info WT whole plant Original data GEO bulk
92 Leafminer damaged seedlings 0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
93 npr1-1 SA -0.58 >More info -0.21 >More info Col-0 SA complete seedling Original data
94 Col-0 C2H4 24h 0.54 >More info 0.24 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
95 Sulfometuron EC50 0.55 >More info 0.23 >More info Carrier Original data GEO bulk
96 clf-28 swn-7 0.50 >More info 0.27 >More info Col whole plant Original data GEO bulk
97 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.54 >More info 0.22 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
98 ACC 3 h 0.50 >More info 0.26 >More info Mock 3 h Original data Basic hormone treatment of seedlings
99 Fenclorim 4hr 0.53 >More info 0.23 >More info Acetone 4hr root Original data GEO bulk
100 35S-MIF1 light grown 0.55 >More info 0.20 >More info Light-grown WT control Original data GEO bulk
101 col-5 DC3000-avrRpm 4h 0.50 >More info 0.25 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
102 Uniconazole 3 h 0.25 >More info 0.50 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
103 root - 08% oxygen - 30min 0.06 >More info 0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
104 ice1 6H Cold 0.55 >More info 0.19 >More info WT 6H Cold Original data GEO bulk
105 eds16 whole leaf 3dpi -0.18 >More info -0.56 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
106 WT 1wk -P 0.51 >More info 0.22 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
107 IMI 4mM 0.52 >More info 0.21 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
108 GST NPP1 4 h (leaf) 0.56 >More info 0.16 >More info Mock 4 h (leaf) Original data Elicitor treatments
109 sid2-2 9 hpi A. brassicicola 0.54 >More info 0.18 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
110 root - 01% oxygen - 30min 0.22 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk
111 Col-0 ozone 0.54 >More info 0.17 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
112 ASL9-ox -0.54 >More info -0.17 >More info WT aerial parts of seedlings Original data GEO bulk
113 ice1 3H Cold 0.53 >More info 0.18 >More info WT 3H Cold Original data GEO bulk
114 Triazolopyrimidine EC50 0.51 >More info 0.20 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
115 Col-0 wt Hypoxic 0.21 >More info 0.50 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
116 tcp13/+ tcp14/+ 0.04 >More info 0.66 >More info WT inflorescences Original data GEO bulk
117 IAA 2h 0.50 >More info 0.20 >More info control 2h root Original data GEO bulk
118 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
119 root - 04% oxygen - 48h 0.04 >More info 0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
120 AvrRpm1 2 h (leaf) 0.51 >More info 0.16 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
121 SA Treated 0.59 >More info 0.08 >More info Water Original data GEO bulk
122 coi1-16 ein2 sid2 ozone 0.50 >More info 0.16 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
123 IRP1-OE-Ctrl--shoot 0.53 >More info 0.13 >More info COL-0-Ctrl--shoot shoot Original data
124 WT Shoot Hypoxia 0.05 >More info 0.60 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
125 cngc19 0.51 >More info 0.13 >More info Col-0 root Original data GEO bulk
126 tcp13 -0.12 >More info 0.76 >More info WT inflorescences Original data GEO bulk
127 WT (Col-0) inflorescence well-watered day 3 -0.11 >More info -0.53 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
128 ein2-PsmES4326-24hpi -0.50 >More info -0.13 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
129 cop1 Seedling BL+ABA 0.50 >More info 0.13 >More info WT Seedling BL+ABA Original data GEO bulk
130 Cor hrpS 10h 0.52 >More info 0.11 >More info Mock 10h Cor hrpS Original data GEO bulk
131 CHS-silenced type -0.55 >More info -0.07 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
132 root epidermis and lateral root cap -S 0.07 >More info 0.55 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
133 35SAvr 0.09 >More info 0.53 >More info Ecotype Col Original data GEO bulk
134 35S:PCO1 hypoxia -0.08 >More info -0.53 >More info WT hypoxia whole rosette Original data
135 Full C2 T2 0.01 >More info -0.62 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
136 ms35 silique stage 7 0.10 >More info 0.50 >More info Ler 6.7 anther and filament Original data GEO bulk
137 hsfa1 quadruple mutant heat shock 0.51 >More info 0.08 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
138 gpa1 +ABA GC -0.50 >More info -0.09 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
139 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
140 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
141 root - 01% oxygen - 2h -0.05 >More info 0.62 >More info root - 21% oxygen - 2h Original data GEO bulk
142 vte2 leaves 120h LT 0.52 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
143 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.51 >More info -0.05 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
144 0 h Attim 17-1 1 0.04 >More info 0.52 >More info 0 h WT seed Original data
145 penta Alternaria 3dpi 0.51 >More info 0.03 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
146 2hr transitory KNO3 ECR cell -0.04 >More info 0.56 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
147 IAA7mII over-expressor IAA Treated -0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
148 Shoot submergence 7h 0.50 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
149 HairpinZ 4 h (leaf) 0.52 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
150 Stem 2ndinternode -0.50 >More info 0.01 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
151 WT Root Hypoxia -0.05 >More info 0.53 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
152 AtMYB30-ox 2-4h Xanthomonas 0.05 >More info -0.52 >More info WT 2-4h Xanthomonas Original data GEO bulk
153 TNT-seedlings 0.51 >More info -0.06 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
154 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
155 Whole root - low pH 30min -0.18 >More info 0.51 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk