4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root - 04% oxygen - 2h
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List of experiments correlated with "root - 04% oxygen - 2h"  Help Download transcriptome of top 30
Score Experiment Correlation from
root - 04% oxygen - 2h		 Correlation to
root - 04% oxygen - 2h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root - 04% oxygen - 2h 1.00 >More info 1.00 >More info root - 21% oxygen - 2h Original data GEO bulk
2 root - 08% oxygen - 2h 0.89 >More info 0.93 >More info root - 21% oxygen - 2h Original data GEO bulk
3 root - 01% oxygen - 2h 0.90 >More info 0.89 >More info root - 21% oxygen - 2h Original data GEO bulk
4 root - 08% oxygen - 30min 0.86 >More info 0.87 >More info root - 21% oxygen - 30min Original data GEO bulk
5 WT Root Hypoxia 0.85 >More info 0.82 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
6 root - 04% oxygen - 30min 0.83 >More info 0.84 >More info root - 21% oxygen - 30min Original data GEO bulk
7 root - 04% oxygen - 48h 0.83 >More info 0.84 >More info root - 21% oxygen - 48h Original data GEO bulk
8 root - 01% oxygen - 30min 0.84 >More info 0.76 >More info root - 21% oxygen - 30min Original data GEO bulk
9 Col-0 wt Hypoxic 0.85 >More info 0.73 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
10 MPK6 ox Root Hypoxia 0.86 >More info 0.72 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
11 root hypoxia total 0.90 >More info 0.67 >More info root control total Original data GEO bulk
12 WT Shoot Hypoxia 0.78 >More info 0.79 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
13 Aerobic e1 ate2 0.78 >More info 0.78 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
14 MPK6 ox Shoot Hypoxia 0.83 >More info 0.72 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
15 root - 01% oxygen - 48h 0.85 >More info 0.68 >More info root - 21% oxygen - 48h Original data GEO bulk
16 root - 08% oxygen - 48h 0.67 >More info 0.85 >More info root - 21% oxygen - 48h Original data GEO bulk
17 Aerobic prt6 0.74 >More info 0.76 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
18 shoot hypoxia total 0.81 >More info 0.68 >More info shoot control total Original data GEO bulk
19 roottip hypoxia total 0.87 >More info 0.57 >More info roottip control total Original data GEO bulk
20 20m.KCl -0.75 >More info -0.68 >More info To. KCl 14 day old Roots Original data GEO bulk
21 35S:PCO1 hypoxia -0.69 >More info -0.72 >More info WT hypoxia whole rosette Original data
22 estradiole-induced ANAC059 -0.77 >More info -0.63 >More info transgenic (empty vector inducible system) Original data GEO bulk
23 P-chlorophenoxy- isobutyric acid 3 h -0.69 >More info -0.65 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
24 35S::HRE1 Hypoxic 0.74 >More info 0.56 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
25 prt6-1 0.78 >More info 0.51 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
26 pepr1-1 Pepr2-3 untreated 0.79 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
27 Cs root -0.78 >More info -0.50 >More info control root Original data GEO bulk
28 bak1-3 untreated 0.88 >More info 0.38 >More info WT untreated untreated Original data GEO bulk
29 Col-0 2HS 0.80 >More info 0.45 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
30 OE-HRA1 2HS  -0.70 >More info -0.55 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
31 Mutant iaa5_6_19 0.85 >More info 0.40 >More info Col Original data GEO bulk
32 mdh -0.87 >More info -0.31 >More info Col Original data GEO bulk
33 spx1 spx2 complete -0.77 >More info -0.41 >More info WT complete seedlings Original data
34 phr1 Root-Pi -0.73 >More info -0.45 >More info WT Root+Pi roots Original data GEO bulk
35 Root -Cs -0.55 >More info -0.60 >More info Control-root Original data GEO bulk
36 2 hr Hypoxia Total RNA 0.79 >More info 0.35 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
37 R. sylvestris submerged 0.78 >More info 0.36 >More info R. sylvestris air Original data GEO bulk
38 PRR5-VP 12h light on -0.82 >More info -0.32 >More info WT 12h light on whole plant Original data GEO bulk
39 bri1-116 0.40 >More info 0.73 >More info Col seedling Original data GEO bulk
40 RRE1 Chitin 0.84 >More info 0.28 >More info Chitin Original data GEO bulk
41 Root submergence 24h 0.83 >More info 0.27 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
42 Tsu-1 -Fe 48h 0.88 >More info 0.22 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
43 Tsu -Fe 48h Roots 0.88 >More info 0.22 >More info Tsu +Fe 24h Roots Original data GEO bulk
44 Root submergence 7h 0.80 >More info 0.30 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
45 Col upon hypoxia 6 hrs 0.90 >More info 0.19 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
46 RRE2 Chitin 0.84 >More info 0.25 >More info Chitin Original data GEO bulk
47 Cambium 5 days NAA 0.74 >More info 0.35 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
48 2 hr Hypoxia IP RNA 0.75 >More info 0.33 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
49 Oxidative Stress 3 h (root) 0.71 >More info 0.37 >More info Stress mock 3 h (root) Original data Stress treatments
50 Nuclear GSH1 -0.81 >More info -0.27 >More info Cytoplasmic GSH1 Control Original data GEO bulk
51 Col-0 low oxygen 0.88 >More info 0.20 >More info Col-0 Original data GEO bulk
52 35S:MYB28 like miR -0.41 >More info -0.67 >More info WT for miR Original data GEO bulk
53 0.2µM SMX -0.80 >More info -0.27 >More info control Whole seedling Original data GEO bulk
54 coi1-2 JA -0.62 >More info -0.45 >More info JA Whole seedling Original data GEO bulk
55 etr1 1% sucrose 12-day-old 0.81 >More info 0.25 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
56 Col BTH 0.39 >More info 0.67 >More info Col rosettes Original data GEO bulk
57 1.5 hr ammonium 0.79 >More info 0.26 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
58 R. amphibia submerged 0.77 >More info 0.28 >More info R. amphibia air Original data GEO bulk
59 seed germinating in countinuous light 24h SL 0.38 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
60 HARAP aerobic 0.63 >More info 0.41 >More info WT aerobic aerobic Original data GEO bulk
61 Prohexadione 3 h -0.77 >More info -0.27 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
62 Col0 roots 2hr KNO3 nitrogen -0.66 >More info -0.38 >More info Col0 roots 2hr KCl control root Original data GEO bulk
63 cys-c1 root 0.78 >More info 0.25 >More info Root-WT roots Original data GEO bulk
64 Light 0.80 >More info 0.23 >More info Control Original data GEO bulk
65 ein2 mutant roots mock -0.66 >More info -0.37 >More info roots mock Original data GEO bulk
66 erf5 erf6 0.71 >More info 0.31 >More info WT+water water seedlings Original data GEO bulk
67 Stem tissue 5 days NAA 0.81 >More info 0.21 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
68 Heat Recovery 24 h (root) -0.82 >More info -0.20 >More info Stress mock 24 h (root) Original data Stress treatments
69 5-Triiodobenzoic acid3 h -0.53 >More info -0.49 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
70 Root GLU1-KO 0.57 >More info 0.44 >More info Root Col(0) roots Original data GEO bulk
71 WT +elf18 2h -0.79 >More info -0.21 >More info WT untreated elf18 Original data GEO bulk
72 FHY3p dark+DEX -0.79 >More info -0.21 >More info FHY3p dark+mock Original data GEO bulk
73 ANOXIA 0.53 >More info 0.47 >More info ANOXIA+SUCROSE Original data GEO bulk
74 Hypoxic prt6 0.62 >More info 0.37 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
75 9 hr Hypoxia Total RNA 0.84 >More info 0.15 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
76 Tsu -Fe 24h Roots 0.92 >More info 0.07 >More info Tsu +Fe 24h Roots Original data GEO bulk
77 Tsu-1 -Fe 24h 0.92 >More info 0.07 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
78 ABA 1 h -0.40 >More info -0.59 >More info Mock 1 h Original data Basic hormone treatment of seedlings
79 WT +elf18 10h -0.76 >More info -0.22 >More info WT untreated elf18 Original data GEO bulk
80 tumour 0.78 >More info 0.20 >More info non-tumor tumour Original data GEO bulk
81 SA 3h -0.47 >More info -0.51 >More info EtOH 3h 3hr Original data GEO bulk
82 Col-O low light 0.74 >More info 0.23 >More info Col-O bule light Original data GEO bulk
83 root cells epidermis 140mM NaCl 20 hours 0.75 >More info 0.22 >More info root cells epidermis standard 1 hour root cells epidermis Original data
84 Pseudomonas 0.74 >More info 0.23 >More info Control pseudomonas treated whole seedling Original data GEO bulk
85 siliques AtHb1 control 0.45 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
86 Bay-0-3h IAA -0.80 >More info -0.16 >More info Bay-0-0h IAA whole plant Original data GEO bulk
87 Col in Pi deficiency medium 0.79 >More info 0.17 >More info Col in control medium root Original data GEO bulk
88 ddm1 mutant seedlings -0.80 >More info -0.16 >More info control seedlings 10-day old whole seedling Original data GEO bulk
89 hypoxic 0.86 >More info 0.10 >More info WT aerobic hypoxia Original data GEO bulk
90 Heat shock optimum 0.31 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
91 WT (Ler) CK200 0.81 >More info 0.14 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
92 8 hr ammonium 0.68 >More info 0.27 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
93 ACN1-2 Sucrose -0.74 >More info -0.21 >More info Col-7 Sucrose Original data GEO bulk
94 Ws seedlings -0.75 >More info -0.20 >More info ged1 seedlings Original data GEO bulk
95 ged1 seedlings 0.75 >More info 0.20 >More info Ws seedlings Original data GEO bulk
96 gun1gun5 Norflurazon 0.81 >More info 0.13 >More info Norflurazon a herbicide (Norflurazon) seedling Original data GEO bulk
97 empty vector IAA Treated -0.79 >More info -0.15 >More info empty vector mock Original data GEO bulk
98 Dark 0.77 >More info 0.17 >More info Control Original data GEO bulk
99 root callus inducing medium 12 h -0.75 >More info -0.19 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
100 Hypoxic e1 ate 0.53 >More info 0.41 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
101 9 hr Hypoxia 1 hr recovery IP RNA 0.84 >More info 0.10 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
102 GA3 3 h (ga1) -0.76 >More info -0.17 >More info Mock 3 h (ga1) Original data Basic hormone treatment of seedlings
103 ALC Toc1 light-light Mock -0.87 >More info -0.06 >More info Col light-light Mock no ethanol Original data GEO bulk
104 1.5 hr nitrate 0.64 >More info 0.29 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
105 9 hr Hypoxia IP RNA 0.82 >More info 0.11 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
106 elevated CO2 low Mg root -0.71 >More info -0.22 >More info atmospheric CO2 low Mg root Root Original data
107 35S:VND7-VP16-GR+CHX -0.31 >More info -0.62 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
108 afb3-1 2h KCl -0.80 >More info -0.12 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
109 Paclobutrazol 12 h -0.56 >More info -0.36 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
110 DMTU 0.82 >More info 0.10 >More info control Original data GEO bulk
111 24h +Pi -0.73 >More info -0.19 >More info 24h -Pi root Original data GEO bulk
112 Whole root - low pH 3H 0.50 >More info 0.42 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
113 Cold Stress 24 h (root) -0.62 >More info -0.30 >More info Stress mock 24 h (root) Original data Stress treatments
114 Mutant ga1-5 0.74 >More info 0.18 >More info Ler-1 Original data Comparison of plant hormone related mutant
115 4C 7d -0.62 >More info -0.29 >More info 4C 0h Original data GEO bulk
116 WT cold 24h -0.68 >More info -0.22 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
117 elevated CO2 normal Mg root -0.67 >More info -0.23 >More info atmospheric CO2 normal Mg root Root Original data
118 rsl4 -0.67 >More info -0.23 >More info Col-0 Control root Original data GEO bulk
119 msg2-BR 0.82 >More info 0.08 >More info BR BR dark-grown seedlings Original data GEO bulk
120 Genotoxic Stress 3 h (root) -0.80 >More info -0.09 >More info Stress mock 3 h (root) Original data Stress treatments
121 WT hypoxia 0.68 >More info 0.21 >More info WT normoxia whole rosette Original data
122 9 hr Hypoxia 1 hr recovery Total RNA 0.85 >More info 0.04 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
123 aux1 mutant roots air -0.78 >More info -0.11 >More info roots IAA Original data GEO bulk
124 Sha-1h IAA -0.75 >More info -0.14 >More info Sha-0h IAA whole plant Original data GEO bulk
125 Mutant bri1 0.71 >More info 0.18 >More info Ws-2 Original data Comparison of plant hormone related mutant
126 6-trichlorophenoxyacetic acid 3 h -0.19 >More info -0.70 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
127 myb50 xylem 0.71 >More info 0.17 >More info wt xylem xylem Original data GEO bulk
128 WT resupplied Pi 4h -0.60 >More info -0.28 >More info WT complete seedlings Original data
129 9m.KCl 0.65 >More info 0.23 >More info To. KCl 14 day old Roots Original data GEO bulk
130 C58 35dpi 0.78 >More info 0.10 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
131 cngc4 0.70 >More info 0.18 >More info Ws-2 Seedlings Original data GEO bulk
132 estradiole-induced ANAC092 -0.71 >More info -0.16 >More info transgenic (empty vector inducible system) Original data GEO bulk
133 UV Stress 24 h (root) -0.65 >More info -0.22 >More info Stress mock 24 h (root) Original data Stress treatments
134 hog1-7 0.79 >More info 0.08 >More info wt whole seedling Original data GEO bulk
135 root cells epidermis 140mM NaCl 48 hours 0.74 >More info 0.13 >More info root cells epidermis standard 1 hour root cells epidermis Original data
136 axr2-BR 0.77 >More info 0.10 >More info BR BR dark-grown seedlings Original data GEO bulk
137 mutant-line774 0.79 >More info 0.08 >More info WT-control whole plant Original data GEO bulk
138 mbd4 mutant thaliana 10-day-old seedling 0.67 >More info 0.19 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
139 tetraploid -0.54 >More info -0.32 >More info diploid Original data GEO bulk
140 Col-0 WT HL 3h -0.60 >More info -0.26 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
141 ga1-3/brm-1 0.82 >More info 0.04 >More info wt shoots Original data GEO bulk
142 RRE1 0.75 >More info 0.11 >More info Col C Original data GEO bulk
143 elevated CO2 high Mg root -0.72 >More info -0.14 >More info atmospheric CO2 high Mg root Root Original data
144 Col-0 RNAi-MBS2/mbs1-1 HL 0h -0.69 >More info -0.17 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
145 vtc2 day 7 induction 0.71 >More info 0.15 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
146 myb3 myb3r4d -0.83 >More info -0.03 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
147 WT (Ler) TSA -0.66 >More info -0.19 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
148 9m.KNO3 -0.81 >More info -0.04 >More info To. KNO3 14 day old Roots Original data GEO bulk
149 TA induced 0.80 >More info 0.05 >More info Methanol TA Suspension cells Original data GEO bulk
150 Mutant hy5 (High Light) -0.64 >More info -0.21 >More info Col-0 (High Light) Original data GEO bulk
151 rdo2 siliques -0.57 >More info -0.28 >More info WT Ler siliques Original data GEO bulk
152 hy5 high light -0.64 >More info -0.21 >More info Col-O high light Original data GEO bulk
153 cop1 Seedling BL 0.71 >More info 0.14 >More info WT Seedling BL Original data GEO bulk
154 iae1 0.64 >More info 0.21 >More info B179 Original data GEO bulk
155 seedlings + TSA 0.73 >More info 0.12 >More info control seedlings 10-day old whole seedling Original data GEO bulk
156 6m.KNO3 -0.74 >More info -0.11 >More info To. KNO3 14 day old Roots Original data GEO bulk
157 root callus inducing medium 24h -0.65 >More info -0.19 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
158 phyABDE Rc50 -0.69 >More info -0.15 >More info phyABDE Dark red light whole seedling Original data GEO bulk
159 oas-a1.1 root -0.65 >More info -0.18 >More info WT-Untreated Root Original data GEO bulk
160 mutant acs5D (single mutant) 0.63 >More info 0.20 >More info col control (single mutant) Original data GEO bulk
161 nd-1 mock 48 hpi 0.70 >More info 0.13 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
162 Sha-3h IAA -0.74 >More info -0.09 >More info Sha-0h IAA whole plant Original data GEO bulk
163 WT cold 12 h -0.69 >More info -0.14 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
164 PRR5-VP 6h light on -0.69 >More info -0.14 >More info WT 6h light on whole plant Original data GEO bulk
165 KCl germinant -0.79 >More info -0.03 >More info Millipore Water germinant KCl seedling Original data
166 WT light 0.68 >More info 0.14 >More info WT dark Original data GEO bulk
167 mbd6 mutant thaliana 10-day-old seedling 0.73 >More info 0.09 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
168 triplod male excess 0.86 >More info -0.04 >More info tetraploid Original data GEO bulk
169 piffq FR 24h 0.74 >More info 0.07 >More info WT FR 24h whole seedling Original data GEO bulk
170 F1 hybrid submerged 0.57 >More info 0.24 >More info F1 hybrid air Original data GEO bulk
171 Mutant ap2-6(shoot apex) 0.66 >More info 0.14 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
172 Truncated AC2 T1 -0.75 >More info -0.05 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
173 35S-MIF1 light grown 0.60 >More info 0.20 >More info Light-grown WT control Original data GEO bulk
174 Col-0 low oxygen 0.85 >More info -0.05 >More info Col-0 control low oxygen root Original data GEO bulk
175 Anoxia 0.72 >More info 0.08 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
176 GV3101 6dpi 0.71 >More info 0.09 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
177 cys-c1 leaf -0.73 >More info -0.06 >More info Leaf-WT leaves Original data GEO bulk
178 Fei-0-3h IAA -0.68 >More info -0.11 >More info Fei-0-0h IAA whole plant Original data GEO bulk
179 Shoot apex inflorescence (after bolting) 0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
180 hira-protoplast -0.69 >More info -0.10 >More info WT-protoplast protoplast Original data
181 BI-1-30min IAA -0.72 >More info -0.06 >More info BI-1-0h IAA whole plant Original data GEO bulk
182 ahg2-1abi1-1 0.78 >More info 0.00 >More info WT (Col) control Original data GEO bulk
183 PNO8 12 h -0.73 >More info -0.05 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
184 Base wox4 -0.52 >More info -0.26 >More info Base Col base of stem Original data GEO bulk
185 gun5 control 0.77 >More info 0.01 >More info Col-0 control Original data GEO bulk
186 CCA1-ox 6am non-polysomal 0.27 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
187 Prohexadione 12 h -0.69 >More info -0.09 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
188 35S::ZAT12 -0.64 >More info -0.13 >More info gl1 Original data GEO bulk
189 BI-1-3h IAA -0.64 >More info -0.13 >More info BI-1-0h IAA whole plant Original data GEO bulk
190 JA 0.73 >More info 0.04 >More info Col-0 mock Whole seedling Original data GEO bulk
191 IPT8 induced 24h 0.59 >More info 0.18 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
192 msg2 0.62 >More info 0.15 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
193 Propiconazole 3 h 0.60 >More info 0.17 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
194 sng1 -0.52 >More info -0.25 >More info WT aerial region Original data GEO bulk
195 Col-0 (t-zeatin 3 h) -0.61 >More info -0.16 >More info Col-0 Original data Cytokinin treatment of seedlings
196 4C 1h -0.55 >More info -0.22 >More info 4C 0h Original data GEO bulk
197 gun1-9 control 0.76 >More info 0.01 >More info Col-0 control Original data GEO bulk
198 Salt Stress 24 h (root) -0.62 >More info -0.15 >More info Stress mock 24 h (root) Original data Stress treatments
199 Nuclear GSH3 0.77 >More info -0.01 >More info Cytoplasmic GSH3 Media change Original data GEO bulk
200 mil4 sid2 0.50 >More info 0.26 >More info Col rosettes Original data GEO bulk
201 IAA7mII over-expressor mock -0.56 >More info -0.20 >More info empty vector mock Original data GEO bulk
202 arr-BA-sample 0.66 >More info 0.10 >More info Wt-BA-sample seedling Original data
203 siliques WT hypoxia 0.75 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
204 sdg2 -0.61 >More info -0.15 >More info wt seedling Original data GEO bulk
205 ago4-1 0.78 >More info -0.02 >More info WT La-er whole plants Original data GEO bulk
206 WT zebularine 0.63 >More info 0.13 >More info WT mock shoot apical meristem Original data
207 Te 3d 0.73 >More info 0.03 >More info Te CA Leaves Original data
208 seedling mSPL13 0.63 >More info 0.13 >More info seedling Col-0 Original data GEO bulk
209 L2.5 mutant -0.50 >More info -0.25 >More info Wt Original data GEO bulk
210 axr2 0.70 >More info 0.05 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
211 PBZ 0.74 >More info 0.01 >More info none PBZ Rosette Original data GEO bulk
212 Drought Stress 24 h (root) -0.64 >More info -0.11 >More info Stress mock 24 h (root) Original data Stress treatments
213 OsRLCK253 expressing 0.70 >More info 0.05 >More info WT seedlings Original data GEO bulk
214 miR396b overexpressor -0.53 >More info -0.22 >More info Col-0 vegetative apices together with the leaf primordia Original data
215 35S-MIF1 dark grown 0.65 >More info 0.10 >More info Dark-grown WT control Original data GEO bulk
216 15m.KNO3 -0.70 >More info -0.05 >More info To. KNO3 14 day old Roots Original data GEO bulk
217 ref6-1 0.63 >More info 0.12 >More info Col whole seedling Original data GEO bulk
218 C58 3hpi 0.71 >More info 0.04 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
219 ckh1 CK25 0.76 >More info -0.01 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
220 Whole root - S 3H -0.23 >More info -0.52 >More info Whole root - S 0H Original data GEO bulk
221 root cells epidermis 140mM NaCl 32 hours 0.66 >More info 0.08 >More info root cells epidermis standard 1 hour root cells epidermis Original data
222 col 24h4c set4 -0.51 >More info -0.23 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
223 8-DAC chr11-1chr17-1 -0.63 >More info -0.11 >More info 8-DAC Col-0 leaf explants Original data
224 pvip1 pvip2 seedling 0.76 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
225 JMJ24 knockout 0.69 >More info 0.05 >More info WT Original data GEO bulk
226 E2Fa-Dpa 0.61 >More info 0.12 >More info WT Original data GEO bulk
227 max4 hypocotyl 0.66 >More info 0.07 >More info wt hypocotyl hypocotyl Original data GEO bulk
228 C58 6dpi 0.64 >More info 0.09 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
229 root cells cortex 140mM NaCl 20 hours 0.64 >More info 0.09 >More info root cells cortex standard 1 hour root cells cortex Original data
230 root cells epidermis 140mM NaCl 3 hours 0.70 >More info 0.03 >More info root cells epidermis standard 1 hour root cells epidermis Original data
231 root cells cortex 140mM NaCl 48 hours 0.67 >More info 0.06 >More info root cells cortex standard 1 hour root cells cortex Original data
232 toc1-1-89hr 0.67 >More info 0.06 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
233 ein2 mutant roots IAA -0.53 >More info -0.20 >More info roots ethylene Original data GEO bulk
234 TAMM27 roots 2hr KCl control -0.63 >More info -0.10 >More info Col0 roots 2hr KCl control root Original data GEO bulk
235 roots ethylene 0.58 >More info 0.15 >More info roots air Original data GEO bulk
236 Col0-PsmES4326-24hpi 0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
237 WT no Pi -0.55 >More info -0.17 >More info WT complete seedlings Original data
238 ckh2 CK25 0.74 >More info -0.02 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
239 P.p 6hai 0.87 >More info -0.15 >More info At-Control roots Original data GEO bulk
240 250uM K-nitrate 20min roots -0.75 >More info 0.03 >More info 250uM KCl 20min roots Roots Original data GEO bulk
241 Mutant ap1-15(shoot apex) 0.61 >More info 0.11 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
242 35S:LOB-GR mock 0.59 >More info 0.13 >More info Col mock mock seedling Original data GEO bulk
243 cop1 Seedling BL+ABA 0.77 >More info -0.05 >More info WT Seedling BL+ABA Original data GEO bulk
244 piffq 2d WL 0.66 >More info 0.06 >More info WT 2d WL whole seedling Original data GEO bulk
245 Ts5 roots 2hr KNO3 nitrogen -0.58 >More info -0.14 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
246 35S::RSL4 -0.64 >More info -0.08 >More info Col-0 Control root Original data GEO bulk
247 ubc13A-es -0.63 >More info -0.09 >More info Col-es root Original data GEO bulk
248 Ibuprofen 3 h -0.22 >More info -0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
249 Bay-0-1h IAA -0.68 >More info -0.03 >More info Bay-0-0h IAA whole plant Original data GEO bulk
250 4C 24h(SOIL) -0.52 >More info -0.19 >More info 4C 0h(SOIL) Original data GEO bulk
251 root cells epidermis 140mM NaCl 8 hours 0.63 >More info 0.08 >More info root cells epidermis standard 1 hour root cells epidermis Original data
252 VND6 0h -0.70 >More info -0.01 >More info wt 0h Original data GEO bulk
253 root cells stele 140mM NaCl 20 hours 0.61 >More info 0.10 >More info root cells stele standard 1 hour root cells stele Original data
254 ein2-1 untreated 0.63 >More info 0.08 >More info WT untreated untreated Original data GEO bulk
255 root cells stele 140mM NaCl 48 hours 0.60 >More info 0.11 >More info root cells stele standard 1 hour root cells stele Original data
256 Col-O high light 0.78 >More info -0.07 >More info Col-O bule light Original data GEO bulk
257 IPT8 induced 12h 0.59 >More info 0.12 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
258 per1 in Pi deficiency medium 0.73 >More info -0.02 >More info Col in Pi deficiency medium root Original data GEO bulk
259 RGA-GR-DEX 0.60 >More info 0.11 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
260 IAA Treated 0.53 >More info 0.18 >More info Negative Control Original data GEO bulk
261 FOX line K19624 0.62 >More info 0.09 >More info empty vector control (T3) FOX lines Original data GEO bulk
262 iron minus 6 h -0.81 >More info 0.11 >More info iron +6 h root Original data GEO bulk
263 Paclobutrazol 3 h 0.55 >More info 0.15 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
264 scl3 0.78 >More info -0.08 >More info Col-0 whole root Original data GEO bulk
265 VND6 12h -0.57 >More info -0.13 >More info wt 12h Original data GEO bulk
266 AtLysM RLK1 mutant water -0.57 >More info -0.13 >More info WT water Original data GEO bulk
267 hira-root -0.60 >More info -0.10 >More info WT-root root Original data
268 lib -0.61 >More info -0.09 >More info WT whole seedling Original data GEO bulk
269 Red/FR Light45min -0.11 >More info -0.59 >More info FarRed Light 45min Original data Light treatments
270 4d red light grown hmr-5 seedlings 0.52 >More info 0.17 >More info 4d red light grown WT(Col-0) seedlings Original data
271 PRR5-VP 18h light on -0.56 >More info -0.13 >More info WT 18h light on whole plant Original data GEO bulk
272 0h hml 0.17 >More info 0.52 >More info 0h wt Original data
273 Brz220 12 h -0.63 >More info -0.06 >More info Mock 12 h Original data Effect of brassinosteroid inhibitors on seedlings
274 Bur-0-3h IAA -0.58 >More info -0.11 >More info Bur-0h IAA whole plant Original data GEO bulk
275 atmyc2 cop1 Seedling BL 0.71 >More info -0.02 >More info WT Seedling BL Original data GEO bulk
276 BI-1-1h IAA -0.56 >More info -0.12 >More info BI-1-0h IAA whole plant Original data GEO bulk
277 hy5 low light -0.56 >More info -0.12 >More info Col-O low light Original data GEO bulk
278 Mutant hy5 -0.56 >More info -0.12 >More info Col-0 Original data GEO bulk
279 phr1 Shoot-Pi -0.61 >More info -0.07 >More info WT Root-Pi shoots Original data GEO bulk
280 35S:LOB-GR DEX 0.56 >More info 0.11 >More info Col DEX dexamethasone seedling Original data GEO bulk
281 toc1-1-61hr 0.56 >More info 0.11 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
282 Kas2 roots 2hr KCl control -0.67 >More info 0.00 >More info Col0 roots 2hr KCl control root Original data GEO bulk
283 SCR-GR Time 12H Dex 0.72 >More info -0.05 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
284 Var2-1 roots 2hr KCl control -0.69 >More info 0.02 >More info Col0 roots 2hr KCl control root Original data GEO bulk
285 pnp1-1 1wk +P 0.72 >More info -0.05 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
286 CsUBC13-OE -Fe 0.61 >More info 0.05 >More info Col -Fe root Original data GEO bulk
287 whole roots -Fe 72 hour 0.67 >More info -0.01 >More info whole roots standard Original data GEO bulk
288 Shoot submergence 7h 0.66 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
289 arr10 arr12 -0.54 >More info -0.12 >More info DMSO--WT DMSO roots Original data GEO bulk
290 Mutant arf2-6 (IAA) -0.53 >More info -0.13 >More info Col (IAA) Original data GEO bulk
291 Mutant cry1 -0.81 >More info 0.15 >More info Col-0 Original data GEO bulk
292 iron minus 24h -0.79 >More info 0.13 >More info iron +24h root Original data GEO bulk
293 Fe starvation 72 h 0.67 >More info -0.01 >More info Control Original data GEO bulk
294 HARAP hypoxic -0.51 >More info -0.15 >More info hypoxic hypoxia Original data GEO bulk
295 ALC Toc1 light-light EtOH -0.78 >More info 0.12 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
296 24h volatiles Sm. R3089 0.50 >More info 0.16 >More info 24h untreated whole seedling Original data GEO bulk
297 cry1 low light -0.81 >More info 0.15 >More info Col-O low light Original data GEO bulk
298 P.p 10.5hai 0.85 >More info -0.19 >More info At-Control roots Original data GEO bulk
299 BR -0.59 >More info -0.07 >More info WT-mock BR dark-grown seedlings Original data GEO bulk
300 abi3-6 12 DAF Seed 0.68 >More info -0.03 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
301 Callus 0.61 >More info 0.04 >More info Control for tissue data callus Original data GEO bulk
302 root cells cortex 140mM NaCl 32 hours 0.63 >More info 0.02 >More info root cells cortex standard 1 hour root cells cortex Original data
303 albino Ds13-2198-1 -0.60 >More info -0.05 >More info control Original data GEO bulk
304 Est SA 0.63 >More info 0.02 >More info Col-0 SA Original data GEO bulk
305 whole roots -Fe 48 hour 0.67 >More info -0.02 >More info whole roots standard Original data GEO bulk
306 dsr1 -0.66 >More info 0.01 >More info WT mock Whole seedling Original data GEO bulk
307 cngc19 0.77 >More info -0.12 >More info Col-0 root Original data GEO bulk
308 mp-B4149 mutant IAA 0.61 >More info 0.04 >More info GR-bdl IAA Original data GEO bulk
309 atr mock 0.55 >More info 0.10 >More info WT mock shoot apical meristem Original data
310 ARR22-ox (t-zeatin 3 h) 0.73 >More info -0.08 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
311 root cells stele 140mM NaCl 32 hours 0.58 >More info 0.07 >More info root cells stele standard 1 hour root cells stele Original data
312 Mutant iaa5_6_19(IAA) 0.83 >More info -0.18 >More info Col (IAA) Original data GEO bulk
313 GA3 1 h (ga1) 0.73 >More info -0.09 >More info Mock 1 h (ga1) Original data Basic hormone treatment of seedlings
314 pGL1::GL1-GR Dex 24hours -0.51 >More info -0.13 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
315 clf-28 swn-7 0.55 >More info 0.09 >More info Col whole plant Original data GEO bulk
316 ein2 1% sucrose 14-day-old 0.61 >More info 0.03 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
317 WT +Pep2 10h -0.62 >More info -0.02 >More info WT untreated Pep2 Original data GEO bulk
318 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.68 >More info 0.04 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
319 plant (tga2-5-6) 4h control -0.58 >More info -0.05 >More info plant (Col-0) 4h control Original data GEO bulk
320 hexa mutant (higher order mutant) 0.54 >More info 0.09 >More info col control (higher order mutant) Original data GEO bulk
321 shoots bhlh100/101 0uM Fe 0.59 >More info 0.04 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
322 seedlings +5AC 0.66 >More info -0.03 >More info control seedlings 10-day old whole seedling Original data GEO bulk
323 ein3 eil1 0.65 >More info -0.02 >More info Col-0 mock Whole seedling Original data GEO bulk
324 CCA14 dark late -0.53 >More info -0.10 >More info Col dark late Original data GEO bulk
325 Shoot submergence 24h 0.51 >More info 0.12 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
326 Mutant tga2_5_6 -0.58 >More info -0.05 >More info Col-0 Original data GEO bulk
327 piffq 3d WL 0.54 >More info 0.09 >More info WT 3d WL whole seedling Original data GEO bulk
328 ckh1 CK0 0.70 >More info -0.07 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
329 mutant-line348 0.80 >More info -0.18 >More info WT-control whole plant Original data GEO bulk
330 npr1-1 SA -0.72 >More info 0.10 >More info Col-0 SA complete seedling Original data
331 root cells stele 140mM NaCl 1 hour 0.60 >More info 0.02 >More info root cells stele standard 1 hour root cells stele Original data
332 AVG 3 h -0.77 >More info 0.15 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
333 35S::HRE2 Hypoxic -0.00 >More info 0.62 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
334 P.p 2.5hai 0.92 >More info -0.31 >More info At-Control roots Original data GEO bulk
335 mutant-line409 0.81 >More info -0.20 >More info WT-control whole plant Original data GEO bulk
336 amiRAP hypoxic -0.68 >More info 0.07 >More info hypoxic hypoxia Original data GEO bulk
337 ice1 control 0.52 >More info 0.09 >More info WT control Original data GEO bulk
338 vte1-1 3d vernalization -0.53 >More info -0.08 >More info WT 3d vernalization Original data GEO bulk
339 IAA/inhibitor A Treated 0.76 >More info -0.15 >More info IAA Treated Original data GEO bulk
340 ex1 flu dark 8hours/30 minute light 0.53 >More info 0.08 >More info col dark 8hours/30 minute light Original data GEO bulk
341 FHY3p far-red+DEX 0.50 >More info 0.11 >More info FHY3p far-red+mock Original data GEO bulk
342 Dry pre-dawn 0.70 >More info -0.09 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
343 per1 in control medium 0.63 >More info -0.03 >More info Col in control medium root Original data GEO bulk
344 mbd11 mutant thaliana 10-day-old seedling 0.61 >More info -0.01 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
345 Est 0.64 >More info -0.04 >More info Col-0 Original data GEO bulk
346 Imbibed 3 h (seed) 0.60 >More info 0.00 >More info Dry seed Original data Time course of early seed germination
347 toc1-1-69hr 0.76 >More info -0.16 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
348 C24-3h IAA -0.50 >More info -0.10 >More info C24-0h IAA whole plant Original data GEO bulk
349 GO5; harvested 8h continiously maintained in high
CO2;		 -0.61 >More info 0.01 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
350 FarRed Light 45min 0.03 >More info 0.57 >More info White Light 45min Original data Light treatments
351 phyABDE 4-day dark- 2 hours Rc50 -0.03 >More info -0.57 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
352 clf-28 -0.52 >More info -0.07 >More info Col whole plant Original data GEO bulk
353 Nuclear GSH2 -0.55 >More info -0.03 >More info Cytoplasmic GSH2 Control Original data GEO bulk
354 AGL24 induced 0.51 >More info 0.07 >More info WT-ESTRADIOL Original data GEO bulk
355 ein3 eil1 JA 0.51 >More info 0.07 >More info JA Whole seedling Original data GEO bulk
356 6m.KCl -0.56 >More info -0.02 >More info To. KCl 14 day old Roots Original data GEO bulk
357 SCL3 OE -0.57 >More info -0.01 >More info Col-0 whole root Original data GEO bulk
358 csn3-1 dark 0.59 >More info -0.01 >More info WT dark Original data GEO bulk
359 TiO2 germinant -0.65 >More info 0.08 >More info Millipore Water germinant TiO2 seedling Original data
360 cngc1-3 0.77 >More info -0.20 >More info Col-0 root Original data GEO bulk
361 IAA 24h 0.53 >More info 0.04 >More info control 24h root Original data GEO bulk
362 root cells cortex 140mM NaCl 8 hours 0.66 >More info -0.09 >More info root cells cortex standard 1 hour root cells cortex Original data
363 rli 0.54 >More info 0.03 >More info WT whole plant Original data GEO bulk
364 IBM1 knockout -0.73 >More info 0.16 >More info WT Original data GEO bulk
365 ice1 6H Cold 0.57 >More info 0.00 >More info WT 6H Cold Original data GEO bulk
366 2hr transitory KNO3 PeR cell -0.60 >More info 0.03 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
367 csn4-1 mutant 0.62 >More info -0.05 >More info WT dark Original data GEO bulk
368 Full AC2 T2 0.71 >More info -0.14 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
369 xyl-grown cell culture- 1h 1mM Suc -0.05 >More info 0.62 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
370 WT seedlings MV 0.81 >More info -0.25 >More info WT seedlings control Seedlings Original data GEO bulk
371 Fei-0-1h IAA -0.51 >More info -0.05 >More info Fei-0-0h IAA whole plant Original data GEO bulk
372 pnp1-1 3h -P 0.52 >More info 0.04 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
373 AhNAS2-RNAi +Zn 0.50 >More info 0.06 >More info WT +Zn Root Original data GEO bulk
374 swn-7 -0.54 >More info -0.02 >More info Col whole plant Original data GEO bulk
375 IXB induced 0.54 >More info 0.01 >More info Methanol IXB Suspension cells Original data GEO bulk
376 FOX line K16331 0.50 >More info 0.05 >More info empty vector control (T3) FOX lines Original data GEO bulk
377 pollinated pop2-1 flowers -0.51 >More info -0.04 >More info pollinated WT flowers flowers Original data GEO bulk
378 12m.KNO3 -0.74 >More info 0.19 >More info To. KNO3 14 day old Roots Original data GEO bulk
379 aba2 1% sucrose 12-day-old -0.51 >More info -0.04 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
380 cngc1 -0.72 >More info 0.17 >More info Ws-2 Seedlings Original data GEO bulk
381 Brassinolide 0.5 h (det2) 0.59 >More info -0.04 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
382 Kin 0.62 >More info -0.08 >More info Col-0 Original data GEO bulk
383 CHS-silenced type -0.61 >More info 0.07 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
384 root cells endodermis 140mM NaCl 32 hours 0.53 >More info 0.01 >More info root cells endodermis standard 1 hour root cells endodermis Original data
385 micropylar endosperm linear-cotyledon 0.59 >More info -0.05 >More info whole seeds linear-cotyledon Original data GEO bulk
386 Mutant cry1 (High Light) -0.63 >More info 0.10 >More info Col-0 (High Light) Original data GEO bulk
387 flu dark 8hours/30 minute light 0.60 >More info -0.07 >More info col dark 8hours/30 minute light Original data GEO bulk
388 Fumonisin B1 -0.51 >More info -0.02 >More info control Fumonisin B1 protoplast Original data GEO bulk
389 root cells stele 140mM NaCl 3 hours 0.62 >More info -0.09 >More info root cells stele standard 1 hour root cells stele Original data
390 cry1 high light -0.63 >More info 0.10 >More info Col-O high light Original data GEO bulk
391 aerial organ callus inducing medium 96 h 0.66 >More info -0.13 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
392 Col-0 SA 0.67 >More info -0.15 >More info Col-0 water complete seedling Original data
393 toc1-1-65hr 0.68 >More info -0.16 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
394 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.60 >More info -0.08 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
395 edr1 36 h powdery mildew 0.53 >More info -0.01 >More info Col-0 36 h powdery mildew Original data GEO bulk
396 ahg2-1 0.57 >More info -0.05 >More info WT (Col) control Original data GEO bulk
397 P35S:rGRF1 -0.70 >More info 0.19 >More info Col-0 Original data GEO bulk
398 det2 light-dark -0.67 >More info 0.16 >More info det2 light light-dark Original data GEO bulk
399 tt4 UV 0.65 >More info -0.14 >More info UV aerial region Original data GEO bulk
400 AtGATA2ox 0.52 >More info -0.01 >More info Col seedling Original data GEO bulk
401 WT seedlings IAA -0.50 >More info -0.01 >More info WT seedlings control Seedlings Original data GEO bulk
402 root cells stele 140mM NaCl 8 hours 0.59 >More info -0.09 >More info root cells stele standard 1 hour root cells stele Original data
403 nd-1 V. longisporum-inoculated 48 hpi 0.53 >More info -0.03 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
404 pnp1-1 1wk -P 0.66 >More info -0.16 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
405 Full C2 T1 -0.59 >More info 0.09 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
406 Cocultivation 8 hrs leaf -0.55 >More info 0.05 >More info Mock cocultivation 8 hrs leaf Leaf Original data
407 root cells endodermis 140mM NaCl 48 hours 0.54 >More info -0.04 >More info root cells endodermis standard 1 hour root cells endodermis Original data
408 Mutant clv3-7(flower) -0.56 >More info 0.07 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
409 upf3 0.55 >More info -0.06 >More info WT whole plant Original data GEO bulk
410 gai Control 0.59 >More info -0.10 >More info Laer Control leaf discs Original data GEO bulk
411 iron minus 1 h -0.51 >More info 0.02 >More info iron +1 h root Original data GEO bulk
412 4h decapitation 0.68 >More info -0.20 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
413 sta1 0.65 >More info -0.17 >More info WT Original data GEO bulk
414 csn5 (csn5a-2 csn5b) dark 0.51 >More info -0.03 >More info WT dark Original data GEO bulk
415 csn5 (csn5a-2 csn5b) light 0.64 >More info -0.16 >More info WT light Original data GEO bulk
416 GO5; 0h switch to ambient CO2 concentrations; -0.79 >More info 0.32 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
417 dsr1 SA Treated -0.50 >More info 0.03 >More info SA Whole seedling Original data GEO bulk
418 Col-0 root drought 0.63 >More info -0.16 >More info Col-0 root water root Original data GEO bulk
419 WT 3H Cold -0.59 >More info 0.12 >More info WT control Original data GEO bulk
420 WT 1wk -P 0.63 >More info -0.16 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
421 A. halleri control-root 0.50 >More info -0.04 >More info A. petraea control-root Original data GEO bulk
422 4C 2h(SOIL) -0.54 >More info 0.08 >More info 4C 0h(SOIL) Original data GEO bulk
423 Col 3d 0.52 >More info -0.06 >More info Col CA Leaves Original data
424 mtf1-1 0.70 >More info -0.24 >More info Col0 root Original data
425 JMJ24-IBM1 double knockout -0.67 >More info 0.22 >More info WT Original data GEO bulk
426 P35S:rGRF3 0.68 >More info -0.23 >More info WS Original data GEO bulk
427 root cells endodermis 140mM NaCl 20 hours 0.53 >More info -0.08 >More info root cells endodermis standard 1 hour root cells endodermis Original data
428 oas-a1.1 Cd 18h 0.64 >More info -0.19 >More info Cd 18h root Root Original data GEO bulk
429 DFPM 0.73 >More info -0.28 >More info control Original data GEO bulk
430 Col-7 Sucrose 0.54 >More info -0.10 >More info col-7 Original data GEO bulk
431 20m.KNO3 -0.67 >More info 0.23 >More info To. KNO3 14 day old Roots Original data GEO bulk
432 GR-REV 60min 0.54 >More info -0.10 >More info Col 60min Original data GEO bulk
433 LTN008-2 aza-dc 0.54 >More info -0.11 >More info LTN012-2 Mock Original data
434 Roots Cd 0.51 >More info -0.08 >More info Roots control Cd Root Original data GEO bulk
435 Mutant axr3-1 0.69 >More info -0.26 >More info Col Original data GEO bulk
436 gh3.5D uninoculated -0.60 >More info 0.17 >More info Col-0 48 hpi Original data GEO bulk
437 IRP1-OE-Ctrl--shoot 0.71 >More info -0.28 >More info COL-0-Ctrl--shoot shoot Original data
438 ABA 24h 0.56 >More info -0.14 >More info EtOH 24h 24hr Original data GEO bulk
439 Chemically 0.11 >More info -0.53 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
440 Cs shoot -0.57 >More info 0.15 >More info control shoot Original data GEO bulk
441 upf1 0.52 >More info -0.11 >More info WT whole plant Original data GEO bulk
442 WT mitomycin C 0.54 >More info -0.13 >More info WT mock shoot apical meristem Original data
443 Seedling KUA1-IOX est 0.64 >More info -0.24 >More info Seedling KUA1-IOX mock Original data
444 mil4 BTH 0.56 >More info -0.16 >More info Col BTH rosettes Original data GEO bulk
445 root cells cortex 140mM NaCl 3 hours 0.61 >More info -0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
446 root hypoxia pSCR 0.52 >More info -0.12 >More info root hypoxia total hypoxia root Original data GEO bulk
447 Laer pretreat GA Flg22 1h -0.31 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
448 tbf1-SA 0.52 >More info -0.13 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
449 gun5 norflurazon -0.50 >More info 0.11 >More info gun5 control Original data GEO bulk
450 ckh2 CK0 0.72 >More info -0.33 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
451 root cells endodermis 140mM NaCl 8 hours 0.57 >More info -0.18 >More info root cells endodermis standard 1 hour root cells endodermis Original data
452 seedlings protease IV 0.53 >More info -0.15 >More info seedlings nontreated control whole seedling Original data
453 R. solani AG8 0.60 >More info -0.22 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
454 edr1 18 h powdery mildew 0.50 >More info -0.12 >More info Col-0 18 h powdery mildew Original data GEO bulk
455 P.p 30hai 0.69 >More info -0.31 >More info At-Control roots Original data GEO bulk
456 Leafminer damaged seedlings -0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
457 4d red light grown hmr-22 seedlings 0.58 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
458 bHLH122 ox -0.50 >More info 0.14 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
459 IAA7mII over-expressor IAA Treated -0.33 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
460 root cells endodermis 140mM NaCl 3 hours 0.58 >More info -0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
461 Full C2 T3 0.58 >More info -0.24 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
462 ani1 T16 -0.81 >More info 0.48 >More info WT T16 root tissue Original data GEO bulk
463 BAM7-Lig Ox untreated 0.50 >More info -0.17 >More info WT untreated none shoot Original data
464 IRP1-OE-Fe--shoot 0.57 >More info -0.25 >More info COL-0-Fe--shoot shoot Original data
465 Wounding Stress3 h (root) -0.55 >More info 0.24 >More info Stress mock 3 h (root) Original data Stress treatments
466 Laer treat paclobutrazol (PAC) 0.50 >More info -0.20 >More info Laer Control leaf discs Original data GEO bulk
467 shoots bhlh100/101 100uM Fe 0.58 >More info -0.28 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
468 2hr continuous KNO3 and MSX PeR cell -0.58 >More info 0.30 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
469 dark +H2O2 -0.52 >More info 0.25 >More info dark 5 mM H2O2 seedling Original data GEO bulk
470 Imbibed 24 h ABA 3uM (seed) -0.50 >More info 0.25 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
471 -Sulfate 24 h 0.25 >More info -0.50 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
472 atsf1-2 mutant seedling 0.50 >More info -0.29 >More info Col-0 seedling seedlings Original data
473 Col-0 flu HL 0h -0.60 >More info 0.41 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
474 CeO2 germinant -0.75 >More info 0.56 >More info Millipore Water germinant CeO2 seedling Original data
475 gun1gun5 far-red pretreated -0.56 >More info 0.38 >More info WT far-red pretreated Original data GEO bulk
476 WT +Pep2 2h -0.52 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
477 vtc2 mature somatic embryo 0.52 >More info -0.37 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
478 Col-0 V. longisporum-inoculated 48 hpi 0.55 >More info -0.42 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
479 PNO8 3 h 0.53 >More info -0.44 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
480 ARR22-ox -0.57 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
481 seedlings-week-old RECA1-overexpressing
transgenic		 0.57 >More info -0.51 >More info seedlings-week-old Col-0 seedlings Original data
482 TNT-seedlings 0.70 >More info -0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
483 Mutant axr3-1 (IAA) 0.53 >More info -0.49 >More info Col (IAA) Original data GEO bulk