4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on pGL1::GL1-GR Dex 24hours
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "pGL1::GL1-GR Dex 24hours"
Download transcriptome of top 30
Score
Experiment
Correlation from
pGL1::GL1-GR Dex 24hours
Correlation to
pGL1::GL1-GR Dex 24hours
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
pGL1::GL1-GR Dex 24hours
1.00
>More info
1.00
>More info
pGL1::GL1-GR mock 24hours
Original data
GEO bulk
2
ga1-3 scl3-1
-0.57
>More info
-0.56
>More info
ga1-3
whole root
Original data
3
Pseudomonas
0.54
>More info
0.58
>More info
Control
pseudomonas treated
whole seedling
Original data
GEO bulk
4
WT (Col) glucose
-0.53
>More info
-0.56
>More info
WT (Col)
glucose
seedlings
Original data
GEO bulk
5
Shoot submergence 24h
0.59
>More info
0.47
>More info
Shoot light control
24 h submergence in darkness
whole shoot
Original data
GEO bulk
6
seedling 1.5h after HZE WT
0.62
>More info
0.40
>More info
seedling day 1 unirradiated WT
1.5h
Original data
7
Dark 6h wt
0.65
>More info
0.33
>More info
0h wt
Original data
8
Col BTH
0.30
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
9
Shoot dark control 7h
0.52
>More info
0.44
>More info
Shoot light control
7 h non-submerged dark condition
whole shoot
Original data
GEO bulk
10
24h volatiles Sp. HRO-C48
0.51
>More info
0.45
>More info
24h untreated
whole seedling
Original data
GEO bulk
11
det2 light-dark
0.54
>More info
0.38
>More info
det2 light
light-dark
Original data
GEO bulk
12
Dark 1day wt
0.52
>More info
0.37
>More info
0h wt
Original data
13
pip3 At2g19270 TDNA 9
0.38
>More info
0.51
>More info
Col-0
whole plant
Original data
GEO bulk
14
sex1-3
0.20
>More info
0.69
>More info
Col-WT
leaves
Original data
GEO bulk
15
seedlings by volatiles from leafminer damaged
Lima bean 48h
-0.55
>More info
-0.33
>More info
seedlings by volatiles from healthy Lima bean 48h
leaves
Original data
GEO bulk
16
Heat shock optimum
0.23
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
17
pif4pif5 mut dark
0.70
>More info
0.18
>More info
WT dark
Original data
GEO bulk
18
spch
0.29
>More info
0.56
>More info
Col-0 WT
whole seedling
Original data
GEO bulk
19
seedling 24h after Gamma WT
-0.59
>More info
-0.26
>More info
seedling day 2 unirradiated WT
24h
Original data
20
gun1gun5 drak pretreated
0.55
>More info
0.29
>More info
WT drak pretreated
Original data
GEO bulk
21
Dark 6h hml
0.53
>More info
0.30
>More info
0h hml
Original data
22
3d old, both 10mM sucrose and 0.2µM SMX
-0.50
>More info
-0.33
>More info
control
Whole seedling
Original data
GEO bulk
23
oas-a1.1 root
-0.26
>More info
-0.55
>More info
WT-Untreated
Root
Original data
GEO bulk
24
Light 3day hml
0.24
>More info
0.57
>More info
0h hml
Original data
25
ABA 3h
-0.56
>More info
-0.24
>More info
EtOH 3h
3hr
Original data
GEO bulk
26
4h decapitation
-0.29
>More info
-0.50
>More info
axillary-buds-before-decapitation
axillary shoots
Original data
GEO bulk
27
bri1-116
0.06
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
28
roottip hypoxia pSCR
0.52
>More info
0.26
>More info
roottip hypoxia total
hypoxia
roottip
Original data
GEO bulk
29
gun1gun5 far-red pretreated
0.53
>More info
0.25
>More info
WT far-red pretreated
Original data
GEO bulk
30
12h-DC3000 avrRpm1
0.28
>More info
0.50
>More info
12h-DC3000
leaves
Original data
GEO bulk
31
des1.1
0.54
>More info
0.22
>More info
Leaves-WT
leaf
Original data
GEO bulk
32
Seedling KUA1-IOX est
0.61
>More info
0.14
>More info
Seedling KUA1-IOX mock
Original data
33
root - 08% oxygen - 48h
-0.14
>More info
-0.61
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
34
pad4-est1b-1-doublemutant
0.22
>More info
0.53
>More info
pad4-mutant
developed rosette leaves
Original data
GEO bulk
35
Kas-1 -Fe 48h
-0.52
>More info
-0.22
>More info
Kas-1 +Fe 24h
roots
Original data
GEO bulk
36
Kas -Fe 48h Roots
-0.52
>More info
-0.22
>More info
Kas +Fe 24h Roots
Original data
GEO bulk
37
Nicotinamide-57hr
0.22
>More info
0.52
>More info
WT-untreated-57hr
nicotinamide
aerial tissue
Original data
GEO bulk
38
2hr KCl control SR cell
0.62
>More info
0.11
>More info
2hr KCl control PrR cell
Stele root cells
Original data
GEO bulk
39
nd-1 mock 48 hpi
0.65
>More info
0.08
>More info
Col-0 mock 48 hpi
Pool of >50 individual roots
Original data
40
AAF-OX
0.15
>More info
0.58
>More info
Col-0
Rosette leaf
Original data
GEO bulk
41
2hr continuous KNO3 SR cell
0.59
>More info
0.13
>More info
2hr KCl control PrR cell
Stele root cells
Original data
GEO bulk
42
cngc4
0.19
>More info
0.53
>More info
Ws-2
Seedlings
Original data
GEO bulk
43
Shoot apex inflorescence (after bolting)
0.06
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
44
IAA7mII over-expressor IAA Treated
0.02
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
45
MIL4 ox
0.51
>More info
0.19
>More info
Col
Original data
GEO bulk
46
wt systemic wounding
-0.58
>More info
-0.12
>More info
wt control
leaves
Original data
GEO bulk
47
GA3 1 h (ga1)
0.60
>More info
0.09
>More info
Mock 1 h (ga1)
Original data
Basic hormone treatment of seedlings
48
Split KNO3 roots - 2days
0.61
>More info
0.08
>More info
Split KCl roots - 2days
5mM KNO3 on ONE side for 2 days
roots
Original data
GEO bulk
49
2hr continuous KNO3 PrR cell
0.53
>More info
0.15
>More info
2hr KCl control PrR cell
Protoplasted root cells
Original data
GEO bulk
50
2hr transitory KNO3 SR cell
0.53
>More info
0.15
>More info
2hr KCl control PrR cell
Stele root cells
Original data
GEO bulk
51
roottip hypoxia pWOL
0.61
>More info
0.07
>More info
roottip hypoxia total
Original data
GEO bulk
52
Ws seedlings
-0.52
>More info
-0.15
>More info
ged1 seedlings
Original data
GEO bulk
53
amiR-tor induced 3d
-0.53
>More info
-0.14
>More info
amiR-tor 3d C
3 days estradiol-treated
seedlings
Original data
GEO bulk
54
ged1 seedlings
0.52
>More info
0.15
>More info
Ws seedlings
Original data
GEO bulk
55
Atwrky63 high light
0.58
>More info
0.09
>More info
Col0 high light
high light for 1h at 1000 μE m-2s-1
leaf
Original data
GEO bulk
56
pif3 Dark 1h
-0.52
>More info
-0.14
>More info
WT Dark 1h
etiolated seedling
Original data
GEO bulk
57
Laer GA 2h
0.53
>More info
0.13
>More info
Laer Control
leaf discs
Original data
GEO bulk
58
amiR-tor induced 6d
-0.59
>More info
-0.05
>More info
amiR-tor 6d C
6 days estradiol-treated
seedlings
Original data
GEO bulk
59
root - 04% oxygen - 2h
-0.13
>More info
-0.51
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
60
seed germinating in countinuous light 24h SL
-0.03
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
61
2xX6x interploidy cross
0.51
>More info
0.12
>More info
2xX2x cross
Original data
GEO bulk
62
opr3 JA 22 h
-0.51
>More info
-0.12
>More info
opr3 0 h
Original data
GEO bulk
63
Laer pretreat JA Flg22 0h
-0.54
>More info
-0.08
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
64
toc1-1-53hr
-0.04
>More info
0.66
>More info
WT-untreated-53hr
none
seedlings aerial tissue
Original data
GEO bulk
65
seedling 1.5h after Gamma atm-1
-0.54
>More info
-0.07
>More info
seedling day 1 unirradiated atm-1
1.5h
Original data
66
WT 1wk -P
-0.51
>More info
-0.10
>More info
WT 1wk +P
No phosphate medium
seedlings without roots
Original data
GEO bulk
67
Norflurazon
0.53
>More info
0.07
>More info
Col-0
Original data
GEO bulk
68
Norflurazon
0.53
>More info
0.07
>More info
WT-Contrl
a herbicide (Norflurazon)
seedling
Original data
GEO bulk
69
Whole root - S 72H
-0.50
>More info
-0.10
>More info
Whole root - S 0H
Original data
GEO bulk
70
WT resupplied Pi 4h
-0.52
>More info
-0.08
>More info
WT complete
seedlings
Original data
71
Laer pretreat GA Flg22 1h
-0.11
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
72
ABA JA 3h
-0.62
>More info
0.03
>More info
EtOH 3h
3hr
Original data
GEO bulk
73
Shoot submergence 7h
0.56
>More info
-0.00
>More info
Shoot light control
7 h submergence in darkness
whole shoot
Original data
GEO bulk
74
35:SUB1A
-0.52
>More info
-0.04
>More info
WT
whole seedling
Original data
GEO bulk
75
green tissue gl3 egl3
-0.53
>More info
-0.02
>More info
green tissue WT L. er
Original data
GEO bulk
76
WR 35S 3h BL
0.62
>More info
-0.08
>More info
WR 35S 0h BL
brassinosteroid
root
Original data
77
CCA1-ox 6am non-polysomal
0.03
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
78
gid1a gid1b-1 gid1c-2 mock 1 hr
-0.54
>More info
0.01
>More info
ga-1 mock 1 hr
Original data
GEO bulk
79
mtf1-1
0.50
>More info
0.02
>More info
Col0
root
Original data
80
siliques AtHb1 control
-0.00
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
81
2d dark-grown WT(Col-0)/1 hr red light
-0.65
>More info
0.14
>More info
2d dark-grown WT seedling
Original data
GEO bulk
82
sim smr1
0.59
>More info
-0.08
>More info
WT
seedling
Original data
GEO bulk
83
TNT-seedlings
-0.01
>More info
0.52
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
84
toc1-1-85hr
-0.06
>More info
0.54
>More info
WT-untreated-85hr
none
seedlings aerial tissue
Original data
GEO bulk
85
tga2 tga5 tga6 ctrl
-0.55
>More info
0.09
>More info
Col-0 ctrl (control genotype tga2 tag5 tga6)
control
Original data
86
Col laser microdissected 5 dpi
0.50
>More info
-0.05
>More info
Col laser microdissected 5d UI
LMD leaf epidermal and mesophyll cells
Original data
GEO bulk
87
170G5-16
-0.53
>More info
0.09
>More info
Ler-2
~600 pooled 7 mm root tips
Original data
GEO bulk
88
Mutant coi1(leaf)
0.53
>More info
-0.11
>More info
Col-0 (leaf)
Original data
GEO bulk
89
xyl-grown cell culture- 1h 1mM Fru
0.08
>More info
-0.50
>More info
xyl-grown cell culture- 1h 1mM Xyl
cell culture
Original data
90
Leafminer damaged seedlings
-0.18
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
91
4d red light grown hmr-22 seedlings
0.57
>More info
-0.21
>More info
4d red light grown WT(Col-0) seedlings
Original data
92
phyB mutant 16C 10hrs
-0.50
>More info
0.15
>More info
16C 10h
whole plant excluding roots
Original data
GEO bulk
93
eds16 whole leaf 7d UI
0.50
>More info
-0.16
>More info
Col whole leaf 7d UI
whole leaf
Original data
GEO bulk
94
Col-0 flu HL 3h
-0.50
>More info
0.17
>More info
Col-0 WT HL 3h
HL stress (1 µE m−2 s−1)
whole seedlings without root
Original data
95
WT NAA 2h
0.51
>More info
-0.20
>More info
WT 0h
Leaf tissue
Original data
GEO bulk
96
ptpks2
0.22
>More info
-0.51
>More info
Col-WT
leaves
Original data
GEO bulk
97
FarRed Light 45min
0.51
>More info
-0.23
>More info
White Light 45min
Original data
Light treatments
98
Col0-PsmES4326-24hpi
-0.41
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk