4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Split KNO3 roots - 2days
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Score Experiment Correlation from
Split KNO3 roots - 2days		 Correlation to
Split KNO3 roots - 2days		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Split KNO3 roots - 2days 1.00 >More info 1.00 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
2 Split KNO3 roots - 8hours 0.89 >More info 0.85 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
3 Split KNO3 roots - 2hours 0.80 >More info 0.87 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
4 Control KNO3 roots - 2days 0.86 >More info 0.71 >More info Control KCl roots - 2days 5mM KNO3 on both sides for 2 days roots Original data GEO bulk
5 P35S:rGRF1 0.85 >More info 0.65 >More info Col-0 Original data GEO bulk
6 Ws 2h KNO3 0.73 >More info 0.71 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
7 Control KNO3 roots - 8hours 0.73 >More info 0.70 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
8 8 hr nitrate 0.77 >More info 0.59 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
9 2hr continuous KNO3 and MSX PeR cell 0.68 >More info 0.66 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
10 1.5 hr nitrate 0.70 >More info 0.61 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
11 grf1/grf2/grf3 -0.78 >More info -0.50 >More info WS Original data GEO bulk
12 2hr transitory KNO3 ECR cell 0.58 >More info 0.70 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
13 250uM K-nitrate 20min roots 0.56 >More info 0.71 >More info 250uM KCl 20min roots Roots Original data GEO bulk
14 chl1-12 10mM NH4NO3 -0.68 >More info -0.59 >More info col 10mM NH4NO3 Root Original data
15 chl1-5 10mM NH4NO3 -0.68 >More info -0.55 >More info col 10mM NH4NO3 Root Original data
16 WT Nitrate 0.5h 0.63 >More info 0.57 >More info WT untreated Original data GEO bulk
17 WT Root-Pi -0.67 >More info -0.52 >More info WT Root+Pi roots Original data GEO bulk
18 chl1-5 Nitrate 0.5h -0.64 >More info -0.54 >More info WT Nitrate 0.5h Original data GEO bulk
19 T101A 10mM NH4NO3 -0.67 >More info -0.50 >More info col 10mM NH4NO3 Root Original data
20 -Sulfate 24 h -0.63 >More info -0.48 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
21 2hr continuous KNO3 EPR cell 0.54 >More info 0.54 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
22 Col 0 2h KNO3 0.54 >More info 0.49 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
23 Control KNO3 roots - 2hours 0.67 >More info 0.32 >More info Control KCl roots - 2hours 5mM KNO3 on both sides for 2 hours roots Original data GEO bulk
24 2hr continuous KNO3 PrR cell 0.46 >More info 0.52 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
25 phr1 Root-Pi -0.60 >More info -0.37 >More info WT Root+Pi roots Original data GEO bulk
26 Root P recovery 0.60 >More info 0.37 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
27 bri1-116 0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
28 chl1-9 10mM NH4NO3 -0.51 >More info -0.40 >More info col 10mM NH4NO3 Root Original data
29 WT in -N -0.59 >More info -0.32 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
30 2hr continuous KNO3 LRCR cell 0.61 >More info 0.29 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
31 WT no Pi -0.57 >More info -0.31 >More info WT complete seedlings Original data
32 2hr transitory KNO3 LRCR cell 0.55 >More info 0.32 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
33 WT resupplied Pi 4h -0.55 >More info -0.32 >More info WT complete seedlings Original data
34 Root -P -0.50 >More info -0.37 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
35 (Ws-2)+100 uM As -0.59 >More info -0.27 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
36 250uM KNO3 20min shoots 0.33 >More info 0.52 >More info 250uM KCL 20min shoots shoots Original data GEO bulk
37 arr10 arr12 0.60 >More info 0.25 >More info DMSO--WT DMSO roots Original data GEO bulk
38 Osmotic Stress 24 h (root) -0.57 >More info -0.28 >More info Stress mock 24 h (root) Original data Stress treatments
39 2hr continuous KNO3 PeR cell 0.56 >More info 0.26 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
40 seedlings-week-old RECA1-overexpressing
transgenic		 -0.56 >More info -0.25 >More info seedlings-week-old Col-0 seedlings Original data
41 naxillin 6h -0.51 >More info -0.30 >More info before treatment naxillin root Original data GEO bulk
42 Whole root - low pH 48H 0.27 >More info 0.53 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
43 P35S:rGRF3 -0.52 >More info -0.26 >More info WS Original data GEO bulk
44 xyl-grown cell culture- 1h 1mM Suc -0.26 >More info -0.52 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
45 Col0 roots 2hr KNO3 nitrogen 0.57 >More info 0.20 >More info Col0 roots 2hr KCl control root Original data GEO bulk
46 amiR-tor induced 6d -0.51 >More info -0.25 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
47 seedling 6h after HZE atm-1 -0.52 >More info -0.23 >More info seedling day 1 unirradiated atm-1 6h Original data
48 shoot control p35S -0.22 >More info -0.53 >More info shoot control total Original data GEO bulk
49 2hr transitory KNO3 EPR cell 0.50 >More info 0.21 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
50 COL-0-Fe--root -0.56 >More info -0.14 >More info COL-0-Ctrl--root root Original data
51 bbx24 in Simulated Shade -0.13 >More info -0.57 >More info WT in simulated shade shade seedling Original data
52 seedling -S Exp -0.50 >More info -0.19 >More info seedling FN Exp seedling Original data
53 pGL1::GL1-GR Dex 24hours 0.08 >More info 0.61 >More info pGL1::GL1-GR mock 24hours Original data GEO bulk
54 IAA7mII over-expressor IAA Treated -0.00 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
55 shoot hypoxia p35S -0.07 >More info -0.59 >More info shoot hypoxia total Original data GEO bulk
56 Col -Fe -0.55 >More info -0.10 >More info Col-es root Original data GEO bulk
57 long 14-degree- -0.13 >More info -0.52 >More info control long Original data GEO bulk
58 agb1 gpa1 -ABA LF -0.10 >More info -0.55 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
59 root cap pGL2(root cap pGL2BRI1) 0h BL -0.58 >More info -0.07 >More info WR 35S 0h BL brassinosteroid root Original data
60 ACN1-2 0.51 >More info 0.13 >More info col-7 Original data GEO bulk
61 Shoot apex inflorescence (after bolting) -0.01 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 agb1 -ABA LF -0.02 >More info -0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
63 Laer pretreat GA Flg22 1h -0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
64 ckh1 CK200 -0.03 >More info -0.55 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
65 SHR-GR Time 12H Dex 0.04 >More info 0.52 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
66 Col BTH -0.11 >More info 0.67 >More info Col rosettes Original data GEO bulk
67 seed germinating in countinuous light 24h SL -0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
68 siliques AtHb1 control -0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
69 Heat shock optimum -0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
70 Col0-PsmES4326-24hpi -0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
71 CCA1-ox 6am non-polysomal -0.10 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
72 2h KNO3 Whole root 0.53 >More info -0.13 >More info 2h KCl control Whole root Whole root Original data GEO bulk
73 WT roots - Fe 0.20 >More info -0.55 >More info WT roots + Fe Roots Original data GEO bulk
74 Leafminer damaged seedlings -0.27 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk