4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 1.5 hr nitrate
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List of experiments correlated with "1.5 hr nitrate"  Help Download transcriptome of top 30
Score Experiment Correlation from
1.5 hr nitrate		 Correlation to
1.5 hr nitrate		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 1.5 hr nitrate 1.00 >More info 1.00 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
2 8 hr nitrate 0.88 >More info 0.83 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
3 Ws 2h KNO3 0.81 >More info 0.82 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
4 1.5 hr ammonium 0.78 >More info 0.81 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
5 Split KNO3 roots - 2hours 0.75 >More info 0.83 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
6 Col 0 2h KNO3 0.75 >More info 0.83 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
7 250uM K-nitrate 20min roots 0.74 >More info 0.78 >More info 250uM KCl 20min roots Roots Original data GEO bulk
8 WT Nitrate 0.5h 0.76 >More info 0.73 >More info WT untreated Original data GEO bulk
9 Split KNO3 roots - 8hours 0.65 >More info 0.76 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
10 2hr continuous KNO3 and MSX PeR cell 0.63 >More info 0.70 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
11 8 hr ammonium 0.70 >More info 0.63 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
12 20m.KNO3 0.60 >More info 0.72 >More info To. KNO3 14 day old Roots Original data GEO bulk
13 Split KNO3 roots - 2days 0.61 >More info 0.70 >More info Split KCl roots - 2days 5mM KNO3 on ONE side for 2 days roots Original data GEO bulk
14 Control KNO3 roots - 2hours 0.63 >More info 0.64 >More info Control KCl roots - 2hours 5mM KNO3 on both sides for 2 hours roots Original data GEO bulk
15 2hr continuous KNO3 EPR cell 0.53 >More info 0.73 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
16 chl1-5 Nitrate 0.5h -0.64 >More info -0.57 >More info WT Nitrate 0.5h Original data GEO bulk
17 250uM KNO3 20min shoots 0.47 >More info 0.71 >More info 250uM KCL 20min shoots shoots Original data GEO bulk
18 2hr transitory KNO3 ECR cell 0.52 >More info 0.64 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
19 P35S:rGRF1 0.62 >More info 0.50 >More info Col-0 Original data GEO bulk
20 2hr continuous KNO3 ECR cell 0.53 >More info 0.59 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
21 2hr continuous KNO3 PrR cell 0.51 >More info 0.57 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
22 15m.KNO3 0.56 >More info 0.49 >More info To. KNO3 14 day old Roots Original data GEO bulk
23 Control KNO3 roots - 8hours 0.53 >More info 0.51 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
24 root - 04% oxygen - 48h 0.31 >More info 0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
25 Col0 roots 2hr KNO3 nitrogen 0.58 >More info 0.36 >More info Col0 roots 2hr KCl control root Original data GEO bulk
26 root - 04% oxygen - 30min 0.28 >More info 0.65 >More info root - 21% oxygen - 30min Original data GEO bulk
27 root - 04% oxygen - 2h 0.29 >More info 0.64 >More info root - 21% oxygen - 2h Original data GEO bulk
28 root - 01% oxygen - 30min 0.30 >More info 0.63 >More info root - 21% oxygen - 30min Original data GEO bulk
29 WT Root Hypoxia 0.35 >More info 0.58 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
30 grf1/grf2/grf3 -0.53 >More info -0.39 >More info WS Original data GEO bulk
31 root - 08% oxygen - 48h 0.30 >More info 0.62 >More info root - 21% oxygen - 48h Original data GEO bulk
32 Prohexadione 3 h -0.26 >More info -0.63 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
33 12m.KNO3 0.32 >More info 0.57 >More info To. KNO3 14 day old Roots Original data GEO bulk
34 Ibuprofen 3 h -0.30 >More info -0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
35 root - 01% oxygen - 2h 0.18 >More info 0.67 >More info root - 21% oxygen - 2h Original data GEO bulk
36 bri1-116 0.12 >More info 0.73 >More info Col seedling Original data GEO bulk
37 Whole root - low pH 1H 0.21 >More info 0.64 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
38 WT Shoot Hypoxia 0.14 >More info 0.71 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
39 Aerobic e1 ate2 0.16 >More info 0.68 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
40 root - 08% oxygen - 2h 0.10 >More info 0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
41 MPK6 ox Root Hypoxia 0.24 >More info 0.58 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
42 Fe starvation 24 h -0.27 >More info -0.54 >More info Control Original data GEO bulk
43 whole roots -Fe 24hour -0.27 >More info -0.54 >More info whole roots standard Original data GEO bulk
44 whole roots -Fe 12 hour -0.26 >More info -0.55 >More info whole roots standard Original data GEO bulk
45 Col BTH 0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
46 P-chlorophenoxy- isobutyric acid 3 h -0.19 >More info -0.59 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
47 root - 08% oxygen - 30min 0.08 >More info 0.70 >More info root - 21% oxygen - 30min Original data GEO bulk
48 Col-0 wt Hypoxic 0.21 >More info 0.57 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
49 Aerobic prt6 0.17 >More info 0.58 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
50 Whole root - low pH 48H 0.17 >More info 0.56 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
51 MPK6 ox Shoot Hypoxia -0.01 >More info 0.71 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
52 root - 01% oxygen - 48h 0.17 >More info 0.52 >More info root - 21% oxygen - 48h Original data GEO bulk
53 2h KNO3 Whole root 0.51 >More info 0.17 >More info 2h KCl control Whole root Whole root Original data GEO bulk
54 seed germinating in countinuous light 24h SL -0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
55 Leafminer damaged seedlings 0.11 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
56 Shoot apex inflorescence (after bolting) -0.00 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
57 Heat shock optimum -0.00 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
58 xyl-grown cell culture- 1h 1mM Fru -0.13 >More info -0.52 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
59 Laer pretreat GA Flg22 1h -0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
60 Full C2 T3 -0.07 >More info -0.55 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
61 P.syringae AvrRpt2 4 h (leaf) 0.03 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
62 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
63 rgs1+no sugars 0.07 >More info -0.65 >More info WT+no sugars rosette leaves Original data GEO bulk
64 3x(m) 0.03 >More info 0.55 >More info 2x two week old seedlings Original data
65 shoot hypoxia total 0.02 >More info 0.55 >More info shoot control total Original data GEO bulk
66 siliques AtHb1 control 0.04 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
67 Col0-PsmES4326-24hpi -0.07 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
68 SA 24h 0.00 >More info 0.54 >More info EtOH 24h 24hr Original data GEO bulk
69 pepr1-1 Pepr2-3 untreated -0.08 >More info 0.54 >More info WT untreated untreated Original data GEO bulk
70 CCA1-ox 6am non-polysomal -0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
71 SA 4mM -0.09 >More info 0.52 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk