4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on Fe starvation 24 h
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "Fe starvation 24 h"
Download transcriptome of top 30
Score
Experiment
Correlation from
Fe starvation 24 h
Correlation to
Fe starvation 24 h
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
Fe starvation 24 h
1.00
>More info
1.00
>More info
Control
Original data
GEO bulk
2
whole roots -Fe 24hour
0.99
>More info
0.99
>More info
whole roots standard
Original data
GEO bulk
3
whole roots -Fe 12 hour
0.89
>More info
0.91
>More info
whole roots standard
Original data
GEO bulk
4
whole roots -Fe 72 hour
0.87
>More info
0.76
>More info
whole roots standard
Original data
GEO bulk
5
Fe starvation 72 h
0.87
>More info
0.76
>More info
Control
Original data
GEO bulk
6
root longitudinal zone-4 -Fe
0.79
>More info
0.82
>More info
root longitudinal zone-4 standard
Original data
GEO bulk
7
whole roots -Fe 48 hour
0.88
>More info
0.73
>More info
whole roots standard
Original data
GEO bulk
8
whole roots -Fe 6 hour
0.81
>More info
0.70
>More info
whole roots standard
Original data
GEO bulk
9
Col -Fe
0.73
>More info
0.70
>More info
Col-es
root
Original data
GEO bulk
10
whole roots -Fe 3 hour
0.52
>More info
0.83
>More info
whole roots standard
Original data
GEO bulk
11
Fe starvation 3 h
0.52
>More info
0.83
>More info
Control
Original data
GEO bulk
12
COL-0-Fe--root
0.72
>More info
0.61
>More info
COL-0-Ctrl--root
root
Original data
13
iron minus 24h
0.55
>More info
0.74
>More info
iron +24h
root
Original data
GEO bulk
14
root longitudinal zone-2 -Fe
0.54
>More info
0.73
>More info
root longitudinal zone-2 standard
Original data
GEO bulk
15
root longitudinal zone-3 -Fe
0.54
>More info
0.71
>More info
root longitudinal zone-3 standard
Original data
GEO bulk
16
Tsu-1 -Fe 48h
0.62
>More info
0.58
>More info
Tsu-1 +Fe 24h
roots
Original data
GEO bulk
17
Tsu -Fe 48h Roots
0.62
>More info
0.58
>More info
Tsu +Fe 24h Roots
Original data
GEO bulk
18
iron minus 6 h
0.56
>More info
0.62
>More info
iron +6 h
root
Original data
GEO bulk
19
roots WT 0uM Fe
0.63
>More info
0.53
>More info
roots WT 100uM Fe
0uM Fe
roots
Original data
GEO bulk
20
Col-0 0h NAA
0.48
>More info
0.64
>More info
Col-0 6h MOCK
Original data
GEO bulk
21
COL-0-Fe--shoot
0.48
>More info
0.59
>More info
COL-0-Ctrl--shoot
shoot
Original data
22
ABA 0.5 h
0.54
>More info
0.50
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
23
ABA 1 h
0.37
>More info
0.62
>More info
Mock 1 h
Original data
Basic hormone treatment of seedlings
24
T101A 10mM NH4NO3
-0.46
>More info
-0.52
>More info
col 10mM NH4NO3
Root
Original data
25
MG132 3 h
0.29
>More info
0.66
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
26
root longitudinal zone-4 NaCl
0.44
>More info
0.51
>More info
root longitudinal zone-4
Original data
GEO bulk
27
chl1-9 10mM NH4NO3
-0.50
>More info
-0.43
>More info
col 10mM NH4NO3
Root
Original data
28
TNT-seedlings
0.27
>More info
0.63
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
29
bbx24 in Simulated Shade
-0.34
>More info
-0.54
>More info
WT in simulated shade
shade
seedling
Original data
30
T101D 10mM NH4NO3
-0.37
>More info
-0.51
>More info
col 10mM NH4NO3
Root
Original data
31
upb1-1 elongation zone
-0.31
>More info
-0.54
>More info
Col-0 elongation zone
Seedling root elongation zone
Original data
GEO bulk
32
Whole root - S 24H
0.30
>More info
0.54
>More info
Whole root - S 0H
Original data
GEO bulk
33
1.5 hr nitrate
-0.54
>More info
-0.27
>More info
immediately prior to nitrogen addtion
roots from hydroponically grown plants
Original data
GEO bulk
34
siliques AtHb1 control
0.29
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
35
root cells endodermis 140mM NaCl 1 hour
0.54
>More info
0.26
>More info
root cells endodermis standard 1 hour
root cells endodermis
Original data
36
ABA 3 h
0.50
>More info
0.30
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
37
root cells cortex 140mM NaCl 1 hour
0.50
>More info
0.29
>More info
root cells cortex standard 1 hour
root cells cortex
Original data
38
CeO2 germinant
-0.16
>More info
-0.62
>More info
Millipore Water germinant
CeO2
seedling
Original data
39
Chemically
0.21
>More info
0.57
>More info
Solvent
treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid
whole seedlings
Original data
40
bri1-116
0.04
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
41
root longitudinal zone-3 pH 4.6
0.19
>More info
0.58
>More info
root longitudinal zone-3 pH 5.7
Original data
GEO bulk
42
IAA7mII over-expressor IAA Treated
0.08
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
43
WT roots - Fe
0.56
>More info
0.19
>More info
WT roots + Fe
Roots
Original data
GEO bulk
44
root cells -Fe
0.59
>More info
0.15
>More info
whole roots standard
Standard media transferred to -Fe media for 24 hours prior to harvesting tissue
Original data
GEO bulk
45
roottip hypoxia total
0.21
>More info
0.52
>More info
roottip control total
Original data
GEO bulk
46
Heat shock optimum
0.08
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
47
Col0-PsmES4326-24hpi
0.11
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
48
Laer pretreat GA Flg22 1h
-0.00
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
49
root cells endodermis and quiescent center -Fe
0.51
>More info
0.19
>More info
whole roots standard
Original data
GEO bulk
50
Kas2 roots 2hr KCl control
0.54
>More info
0.15
>More info
Col0 roots 2hr KCl control
root
Original data
GEO bulk
51
TAMM27 roots 2hr KNO3 nitrogen
0.50
>More info
0.18
>More info
Col0 roots 2hr KNO3 nitrogen
root
Original data
GEO bulk
52
whole roots -Fe
0.63
>More info
0.02
>More info
whole roots standard
Standard media transferred to -Fe media for 24 hours prior to harvesting tissue
Original data
GEO bulk
53
Col BTH
-0.04
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
54
root cells stele -Fe
0.52
>More info
0.09
>More info
whole roots standard
Original data
GEO bulk
55
TAMM27 roots 2hr KCl control
0.51
>More info
0.10
>More info
Col0 roots 2hr KCl control
root
Original data
GEO bulk
56
Shoot apex inflorescence (after bolting)
-0.07
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
57
seed germinating in countinuous light 24h SL
-0.09
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
58
Propiconazole 12 h
0.50
>More info
0.06
>More info
Mock 12 h
Original data
Effect of GA inhibitors on seedlings
59
Leafminer damaged seedlings
-0.02
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
60
Kas2 roots 2hr KNO3 nitrogen
0.51
>More info
0.01
>More info
Col0 roots 2hr KNO3 nitrogen
root
Original data
GEO bulk
61
Laer GA 2h
-0.01
>More info
0.52
>More info
Laer Control
leaf discs
Original data
GEO bulk
62
CCA1-ox 6am non-polysomal
-0.01
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
63
root - 08% oxygen - 30min
-0.08
>More info
0.50
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
64
Ts5 roots 2hr KNO3 nitrogen
0.51
>More info
-0.12
>More info
Col0 roots 2hr KNO3 nitrogen
root
Original data
GEO bulk
65
AtMYB30-as 90-105 min Xanthomonas
0.18
>More info
-0.50
>More info
WT 90-105 min Xanthomonas
Original data
GEO bulk
66
ABA
0.53
>More info
-0.22
>More info
control
Original data
GEO bulk