4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on roottip hypoxia total
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List of experiments correlated with "roottip hypoxia total"  Help Download transcriptome of top 30
Score Experiment Correlation from
roottip hypoxia total		 Correlation to
roottip hypoxia total		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 roottip hypoxia total 1.00 >More info 1.00 >More info roottip control total Original data GEO bulk
2 root hypoxia total 0.89 >More info 0.88 >More info root control total Original data GEO bulk
3 WT Root Hypoxia 0.84 >More info 0.87 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
4 Col-0 wt Hypoxic 0.83 >More info 0.86 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
5 root - 01% oxygen - 2h 0.76 >More info 0.88 >More info root - 21% oxygen - 2h Original data GEO bulk
6 MPK6 ox Root Hypoxia 0.85 >More info 0.79 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
7 Col-0 low oxygen 0.83 >More info 0.78 >More info Col-0 control low oxygen root Original data GEO bulk
8 2 hr Hypoxia Total RNA 0.82 >More info 0.79 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
9 Col-0 2HS 0.81 >More info 0.79 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
10 MPK6 ox Shoot Hypoxia 0.75 >More info 0.84 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
11 WT Shoot Hypoxia 0.75 >More info 0.82 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
12 Anoxia 0.78 >More info 0.75 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
13 shoot hypoxia total 0.73 >More info 0.79 >More info shoot control total Original data GEO bulk
14 TNT-seedlings 0.72 >More info 0.80 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
15 Col upon hypoxia 6 hrs 0.86 >More info 0.64 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
16 2 hr Hypoxia IP RNA 0.79 >More info 0.69 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
17 9 hr Hypoxia Total RNA 0.79 >More info 0.69 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
18 root - 04% oxygen - 2h 0.57 >More info 0.87 >More info root - 21% oxygen - 2h Original data GEO bulk
19 9 hr Hypoxia IP RNA 0.75 >More info 0.63 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
20 9 hr Hypoxia 1 hr recovery Total RNA 0.73 >More info 0.64 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
21 Col-0 low oxygen 0.78 >More info 0.58 >More info Col-0 Original data GEO bulk
22 CeO2 germinant -0.70 >More info -0.65 >More info Millipore Water germinant CeO2 seedling Original data
23 root - 01% oxygen - 30min 0.59 >More info 0.72 >More info root - 21% oxygen - 30min Original data GEO bulk
24 root - 08% oxygen - 30min 0.46 >More info 0.85 >More info root - 21% oxygen - 30min Original data GEO bulk
25 root - 04% oxygen - 30min 0.56 >More info 0.74 >More info root - 21% oxygen - 30min Original data GEO bulk
26 Light 0.71 >More info 0.59 >More info Control Original data GEO bulk
27 whole roots -Fe 72 hour 0.76 >More info 0.53 >More info whole roots standard Original data GEO bulk
28 Fe starvation 72 h 0.76 >More info 0.53 >More info Control Original data GEO bulk
29 root - 04% oxygen - 48h 0.48 >More info 0.81 >More info root - 21% oxygen - 48h Original data GEO bulk
30 Tsu -Fe 24h Roots 0.71 >More info 0.56 >More info Tsu +Fe 24h Roots Original data GEO bulk
31 Tsu-1 -Fe 24h 0.71 >More info 0.56 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
32 root - 08% oxygen - 2h 0.45 >More info 0.82 >More info root - 21% oxygen - 2h Original data GEO bulk
33 root - 01% oxygen - 48h 0.56 >More info 0.69 >More info root - 21% oxygen - 48h Original data GEO bulk
34 1.5 hr ammonium 0.68 >More info 0.56 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
35 oligomycin 1 h 0.53 >More info 0.71 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
36 whole roots -Fe 48 hour 0.74 >More info 0.49 >More info whole roots standard Original data GEO bulk
37 9 hr Hypoxia 1 hr recovery IP RNA 0.68 >More info 0.54 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
38 IAA/inhibitor A Treated 0.69 >More info 0.53 >More info IAA Treated Original data GEO bulk
39 AgNO3 3 h 0.50 >More info 0.71 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
40 Aerobic prt6 0.52 >More info 0.67 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
41 WT seedlings MV 0.59 >More info 0.59 >More info WT seedlings control Seedlings Original data GEO bulk
42 P.p 6hai 0.75 >More info 0.42 >More info At-Control roots Original data GEO bulk
43 9m.KCl 0.69 >More info 0.48 >More info To. KCl 14 day old Roots Original data GEO bulk
44 Root submergence 24h 0.66 >More info 0.50 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
45 plant (tga2-5-6) 4h phytoprostane A1 0.51 >More info 0.65 >More info plant (tga2-5-6) 4h control Original data GEO bulk
46 shoot-10 μM DEX- 6 hr 0.58 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
47 inhibitor B Treated 0.55 >More info 0.59 >More info Negative Control Original data GEO bulk
48 Cs root -0.47 >More info -0.67 >More info control root Original data GEO bulk
49 Col BTH 0.46 >More info 0.67 >More info Col rosettes Original data GEO bulk
50 IAA/inhibitor B Treated 0.48 >More info 0.65 >More info IAA Treated Original data GEO bulk
51 TiO2 germinant -0.73 >More info -0.39 >More info Millipore Water germinant TiO2 seedling Original data
52 root protoplasts 40 mM NaCl 0.56 >More info 0.56 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
53 WT 30μM arsenate 8 hours. 0.55 >More info 0.57 >More info WT control (not supplemented). Original data
54 15m.KCl 0.62 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
55 Aerobic e1 ate2 0.43 >More info 0.69 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
56 Seedling KUA1-IOX est 0.59 >More info 0.52 >More info Seedling KUA1-IOX mock Original data
57 KCl germinant -0.71 >More info -0.40 >More info Millipore Water germinant KCl seedling Original data
58 oas-a1.1 Cd 18h 0.61 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
59 Col-0 HS 0.50 >More info 0.61 >More info Col-0 control heat shocked seedling Original data GEO bulk
60 WT (Col-0) heat shock 0.50 >More info 0.61 >More info WT (Col-0) whole seedling Original data GEO bulk
61 estradiole-induced ANAC059 -0.58 >More info -0.52 >More info transgenic (empty vector inducible system) Original data GEO bulk
62 Selenate (root) 0.65 >More info 0.45 >More info Ws (root) Original data GEO bulk
63 Root Selenate 0.65 >More info 0.45 >More info Root control 40 micromolar selenate Root Original data GEO bulk
64 P.p 2.5hai 0.73 >More info 0.37 >More info At-Control roots Original data GEO bulk
65 Chemically 0.44 >More info 0.66 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
66 shoot-10 μM DEX- 12 hr 0.53 >More info 0.56 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
67 estradiole-induced ANAC092 -0.57 >More info -0.51 >More info transgenic (empty vector inducible system) Original data GEO bulk
68 Heat and anoxia 0.55 >More info 0.53 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
69 gai Control 0.61 >More info 0.47 >More info Laer Control leaf discs Original data GEO bulk
70 FHY3p dark+DEX -0.75 >More info -0.33 >More info FHY3p dark+mock Original data GEO bulk
71 root stele 40 mM NaCls 0.56 >More info 0.51 >More info root stele Original data GEO bulk
72 Whole root - low pH 3H 0.43 >More info 0.64 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
73 whole roots 140 mM NaCl 30 minutes 0.61 >More info 0.45 >More info whole roots standard Original data GEO bulk
74 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.60 >More info -0.45 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
75 Seedling-HeatStressed POLYSOMESmRNA 0.50 >More info 0.55 >More info Seedling-control POLYSOMESmRNA seedling Original data
76 Mutant axr3-1 (IAA) 0.52 >More info 0.52 >More info Col (IAA) Original data GEO bulk
77 OE-HRA1 2HS  -0.59 >More info -0.45 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
78 roottip control p35S 0.50 >More info 0.54 >More info roottip control total control roottip Original data GEO bulk
79 root Dosed gold 0.59 >More info 0.45 >More info root No gold .125 mM gold 24 h roots Original data
80 TA induced 0.59 >More info 0.45 >More info Methanol TA Suspension cells Original data GEO bulk
81 0.125 mM gold 24 h 0.59 >More info 0.45 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
82 siliques AtHb1 control 0.51 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
83 protoplasted roots pH4.6 0.57 >More info 0.46 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
84 35S:PCO1 hypoxia -0.51 >More info -0.52 >More info WT hypoxia whole rosette Original data
85 Seedling-HeatStressed TOTALmRNA 0.49 >More info 0.54 >More info Seedling-control TOTALmRNA seedling Original data
86 columella auxin 0.53 >More info 0.49 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
87 root cells epidermis 140mM NaCl 48 hours 0.63 >More info 0.39 >More info root cells epidermis standard 1 hour root cells epidermis Original data
88 Heat shock optimum 0.37 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
89 1 h Light Total RNA -0.44 >More info -0.58 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
90 1 h Light IP RNA -0.55 >More info -0.46 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
91 P.p 10.5hai 0.67 >More info 0.34 >More info At-Control roots Original data GEO bulk
92 per1 in Pi deficiency medium 0.60 >More info 0.41 >More info Col in Pi deficiency medium root Original data GEO bulk
93 roottip control pWOL 0.46 >More info 0.55 >More info roottip control total control roottip Original data GEO bulk
94 WT+H2O2 0.42 >More info 0.59 >More info WT H2O2 Original data GEO bulk
95 2hr transitory KNO3 PrR cell 0.36 >More info 0.65 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
96 root callus inducing medium 12 h -0.66 >More info -0.34 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
97 root callus inducing medium 24h -0.66 >More info -0.34 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
98 Root submergence 7h 0.58 >More info 0.42 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
99 Propiconazole 3 h 0.43 >More info 0.57 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
100 Col-0 37C 0.48 >More info 0.52 >More info Col-0 22C Original data GEO bulk
101 Ws HS 0.48 >More info 0.52 >More info Ws control heat shocked seedling Original data GEO bulk
102 mdh -0.51 >More info -0.48 >More info Col Original data GEO bulk
103 hypoxic 0.58 >More info 0.41 >More info WT aerobic hypoxia Original data GEO bulk
104 F1 hybrid submerged 0.56 >More info 0.42 >More info F1 hybrid air Original data GEO bulk
105 R. solani AG8 0.58 >More info 0.40 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
106 R. sylvestris submerged 0.56 >More info 0.42 >More info R. sylvestris air Original data GEO bulk
107 5-Triiodobenzoic acid3 h 0.29 >More info 0.69 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
108 Pseudomonas 0.58 >More info 0.39 >More info Control pseudomonas treated whole seedling Original data GEO bulk
109 HSP90 Reduced RNAi-A2 0.60 >More info 0.37 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
110 Rose Bengal 0.5 uM 0.32 >More info 0.65 >More info Control RB and PER Rose Bengal Original data
111 toc1-1-77hr 0.56 >More info 0.40 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
112 RRE2 Chitin 0.66 >More info 0.30 >More info Chitin Original data GEO bulk
113 whole roots 140 mM NaCl 1 hour 0.53 >More info 0.43 >More info whole roots standard Original data GEO bulk
114 HSP90 Reduced RNAi-B1 0.58 >More info 0.38 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
115 ARR22-ox (t-zeatin 3 h) 0.59 >More info 0.37 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
116 seed germinating in countinuous light 24h SL 0.28 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
117 root cells epidermis 140mM NaCl 20 hours 0.63 >More info 0.32 >More info root cells epidermis standard 1 hour root cells epidermis Original data
118 CMP 24hr 0.58 >More info 0.37 >More info Acetone 24hr root Original data GEO bulk
119 Col leaf 100mM NaCl 0.55 >More info 0.39 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
120 Col leaf 100mM NaCl 0.55 >More info 0.39 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
121 Col 100mM NaCl 0.55 >More info 0.39 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
122 OsSAP11 expressing -0.40 >More info -0.54 >More info WT seedlings Original data GEO bulk
123 Leafminer damaged seedlings 0.38 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
124 0.2µM SMX -0.57 >More info -0.37 >More info control Whole seedling Original data GEO bulk
125 toc1-1-69hr 0.61 >More info 0.33 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
126 root cells epidermis 140mM NaCl 3 hours 0.61 >More info 0.33 >More info root cells epidermis standard 1 hour root cells epidermis Original data
127 DFPM 0.60 >More info 0.34 >More info control Original data GEO bulk
128 Protoplast Induced 0.30 >More info 0.64 >More info Uninduced Original data GEO bulk
129 shoot-10 μM DEX- 24hr 0.41 >More info 0.53 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
130 toc1-1-65hr 0.53 >More info 0.40 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
131 hira-root -0.66 >More info -0.27 >More info WT-root root Original data
132 inhibitor A Treated 0.37 >More info 0.56 >More info Negative Control Original data GEO bulk
133 upb1-1 elongation zone -0.39 >More info -0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
134 shoots bhlh100/101 0uM Fe 0.58 >More info 0.35 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
135 Mutant axr3-1 0.51 >More info 0.42 >More info Col Original data GEO bulk
136 seedlings-week-old RECA1-overexpressing
transgenic		 0.58 >More info 0.35 >More info seedlings-week-old Col-0 seedlings Original data
137 Col0-PsmES4326-24hpi 0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
138 Hypoxic prt6 0.54 >More info 0.38 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
139 bbx24 in Simulated Shade -0.51 >More info -0.41 >More info WT in simulated shade shade seedling Original data
140 root cells cortex 140mM NaCl 48 hours 0.60 >More info 0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
141 pmr5 0.50 >More info 0.42 >More info Col-0 Original data GEO bulk
142 upf3 0.57 >More info 0.35 >More info WT whole plant Original data GEO bulk
143 Root dark control 24h 0.42 >More info 0.50 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
144 RRE1 Chitin 0.67 >More info 0.24 >More info Chitin Original data GEO bulk
145 Shoot apex inflorescence (after bolting) 0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
146 root cells epidermis 140mM NaCl 8 hours 0.60 >More info 0.31 >More info root cells epidermis standard 1 hour root cells epidermis Original data
147 max4 hypocotyl 0.53 >More info 0.37 >More info wt hypocotyl hypocotyl Original data GEO bulk
148 elevated CO2 high Mg root -0.63 >More info -0.27 >More info atmospheric CO2 high Mg root Root Original data
149 JA 0.53 >More info 0.37 >More info Col-0 mock Whole seedling Original data GEO bulk
150 35S::RSL4 -0.50 >More info -0.40 >More info Col-0 Control root Original data GEO bulk
151 IAA 0h -0.35 >More info -0.55 >More info control 0h root Original data GEO bulk
152 opr3 OPDA 0.5 h 0.33 >More info 0.57 >More info opr3 0 h Original data GEO bulk
153 Cycloheximide 3 h 0.38 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
154 root callus inducing medium 48 h -0.58 >More info -0.31 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
155 wavy 0.54 >More info 0.34 >More info WT Original data GEO bulk
156 4d red light grown hmr-5 seedlings 0.55 >More info 0.33 >More info 4d red light grown WT(Col-0) seedlings Original data
157 bak1-3 +Pep2 10h 0.52 >More info 0.36 >More info WT +Pep2 10h Pep2 Original data GEO bulk
158 R. amphibia submerged 0.51 >More info 0.37 >More info R. amphibia air Original data GEO bulk
159 toc1-1-81hr 0.34 >More info 0.53 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
160 SCR-GR Time 12H Dex 0.65 >More info 0.22 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
161 root cells cortex 140mM NaCl 8 hours 0.65 >More info 0.22 >More info root cells cortex standard 1 hour root cells cortex Original data
162 rcf1-1 cold 0h 0.61 >More info 0.26 >More info WT cold 0h Control seedlings Original data GEO bulk
163 root cells endodermis 140mM NaCl 48 hours 0.56 >More info 0.30 >More info root cells endodermis standard 1 hour root cells endodermis Original data
164 Genotoxic Stress 3 h (root) -0.71 >More info -0.15 >More info Stress mock 3 h (root) Original data Stress treatments
165 root cells stele -Fe 0.51 >More info 0.35 >More info whole roots standard Original data GEO bulk
166 root cells stele 140mM NaCl 3 hours 0.60 >More info 0.26 >More info root cells stele standard 1 hour root cells stele Original data
167 root cells cortex 140mM NaCl 20 hours 0.53 >More info 0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
168 root epidermis and lateral root cap 40 mM NaCl 0.53 >More info 0.32 >More info root epidermis and lateral root cap Original data GEO bulk
169 ani1 T16 -0.63 >More info -0.22 >More info WT T16 root tissue Original data GEO bulk
170 P.p 30hai 0.62 >More info 0.23 >More info At-Control roots Original data GEO bulk
171 root cells stele 140mM NaCl 8 hours 0.66 >More info 0.18 >More info root cells stele standard 1 hour root cells stele Original data
172 root cells stele 140mM NaCl 1 hour 0.64 >More info 0.20 >More info root cells stele standard 1 hour root cells stele Original data
173 root cells columella root cap -Fe 0.55 >More info 0.29 >More info whole roots standard Original data GEO bulk
174 8 hr ammonium 0.54 >More info 0.30 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
175 root epidermis and lateral root cap pH4.6 0.51 >More info 0.33 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
176 12m.KCl 0.34 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
177 root cells endodermis 140mM NaCl 3 hours 0.60 >More info 0.24 >More info root cells endodermis standard 1 hour root cells endodermis Original data
178 root cells stele 140mM NaCl 48 hours 0.57 >More info 0.27 >More info root cells stele standard 1 hour root cells stele Original data
179 aux1 mutant roots air -0.61 >More info -0.23 >More info roots IAA Original data GEO bulk
180 root control pSultr2:2 0.57 >More info 0.27 >More info root control total control root Original data GEO bulk
181 pvip1 pvip2 0.57 >More info 0.27 >More info Col-0 whole rosettes Original data GEO bulk
182 MG132 3 h 0.23 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
183 Mutant iaa5_6_19(IAA) 0.64 >More info 0.19 >More info Col (IAA) Original data GEO bulk
184 root cells endodermis and quiescent center -Fe 0.51 >More info 0.32 >More info whole roots standard Original data GEO bulk
185 Dex-rga(delta17) 2h GA4 -0.50 >More info -0.33 >More info Vector 4h GA4 shoots Original data GEO bulk
186 root - 08% oxygen - 48h 0.18 >More info 0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
187 hrpA fliC 7h 0.27 >More info 0.56 >More info Mock 7h hrpA fliC Original data GEO bulk
188 per1 in control medium 0.57 >More info 0.26 >More info Col in control medium root Original data GEO bulk
189 root cells stele 140mM NaCl 32 hours 0.59 >More info 0.24 >More info root cells stele standard 1 hour root cells stele Original data
190 etr1 1% sucrose 12-day-old 0.61 >More info 0.22 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
191 flu over-tAPX 0.29 >More info 0.53 >More info WT Col Original data GEO bulk
192 oas-a1.1 root -0.31 >More info -0.51 >More info WT-Untreated Root Original data GEO bulk
193 Tsu-1 -Fe 48h 0.69 >More info 0.13 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
194 Tsu -Fe 48h Roots 0.69 >More info 0.13 >More info Tsu +Fe 24h Roots Original data GEO bulk
195 toc1-1-53hr 0.25 >More info 0.57 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
196 root cells epidermis 140mM NaCl 32 hours 0.56 >More info 0.25 >More info root cells epidermis standard 1 hour root cells epidermis Original data
197 root cells cortex 140mM NaCl 3 hours 0.63 >More info 0.18 >More info root cells cortex standard 1 hour root cells cortex Original data
198 gabaculin 0.56 >More info 0.25 >More info WT Col-0 seedling Original data GEO bulk
199 ein3 eil1 0.54 >More info 0.26 >More info Col-0 mock Whole seedling Original data GEO bulk
200 root cells -Fe 0.52 >More info 0.28 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
201 flu 0.28 >More info 0.52 >More info WT Col Original data GEO bulk
202 Col-O high light 0.54 >More info 0.25 >More info Col-O bule light Original data GEO bulk
203 Phytoprostane A1 4 h 0.22 >More info 0.57 >More info Col-0 Original data GEO bulk
204 root hypoxia pWOL 0.52 >More info 0.26 >More info root hypoxia total hypoxia root Original data GEO bulk
205 coi1-16 ein2 sid2 ctrl -0.50 >More info -0.28 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
206 seedlings + TSA 0.58 >More info 0.20 >More info control seedlings 10-day old whole seedling Original data GEO bulk
207 bri1-116 0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
208 cpctry 0.27 >More info 0.51 >More info Col Original data GEO bulk
209 3x(m) 0.03 >More info 0.75 >More info 2x two week old seedlings Original data
210 root cells cortex 140mM NaCl 32 hours 0.56 >More info 0.21 >More info root cells cortex standard 1 hour root cells cortex Original data
211 Blue Light 45 min -0.18 >More info -0.59 >More info White Light 45min Original data Light treatments
212 HSP90 Reduced RNAi-C1 0.50 >More info 0.26 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
213 root cells cortex 140mM NaCl 1 hour 0.54 >More info 0.22 >More info root cells cortex standard 1 hour root cells cortex Original data
214 seedlings +5AC 0.52 >More info 0.23 >More info control seedlings 10-day old whole seedling Original data GEO bulk
215 root cells endodermis 140mM NaCl 8 hours 0.62 >More info 0.13 >More info root cells endodermis standard 1 hour root cells endodermis Original data
216 35S:RPS4 eds1-2 2h -0.21 >More info -0.54 >More info 35S:RPS4 2h leaves Original data
217 2hr transitory KNO3 PeR cell -0.50 >More info -0.24 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
218 cngc19 0.52 >More info 0.22 >More info Col-0 root Original data GEO bulk
219 whole roots -Fe 24hour 0.52 >More info 0.21 >More info whole roots standard Original data GEO bulk
220 siliques WT hypoxia 0.72 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
221 CAX1/CAX3 mutant 0.52 >More info 0.21 >More info Col whole plant Original data GEO bulk
222 Fe starvation 24 h 0.52 >More info 0.21 >More info Control Original data GEO bulk
223 1h +Pi -0.23 >More info -0.50 >More info 1h -Pi root Original data GEO bulk
224 vte1-1 3d vernalization -0.59 >More info -0.13 >More info WT 3d vernalization Original data GEO bulk
225 Drought Stress 24 h (root) -0.51 >More info -0.21 >More info Stress mock 24 h (root) Original data Stress treatments
226 toc1-1-85hr 0.21 >More info 0.51 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
227 myb50 xylem 0.55 >More info 0.16 >More info wt xylem xylem Original data GEO bulk
228 pip3 At2g19270 TDNA 9 0.17 >More info 0.54 >More info Col-0 whole plant Original data GEO bulk
229 Callus 0.64 >More info 0.07 >More info Control for tissue data callus Original data GEO bulk
230 embryo paclobutrazol 0.50 >More info 0.21 >More info embryo-control paclobutrazol embryo Original data GEO bulk
231 root stele pH4.6 0.53 >More info 0.18 >More info root stele pH5.7 Original data GEO bulk
232 Ibuprofen 3 h 0.20 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
233 CsUBC13-OE -Fe 0.21 >More info 0.50 >More info Col -Fe root Original data GEO bulk
234 cngc1 -0.53 >More info -0.17 >More info Ws-2 Seedlings Original data GEO bulk
235 Whole root - low pH 1H 0.14 >More info 0.56 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
236 Stem tissue 5 days NAA 0.52 >More info 0.18 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
237 root cells endodermis 140mM NaCl 32 hours 0.50 >More info 0.20 >More info root cells endodermis standard 1 hour root cells endodermis Original data
238 whole roots -Fe 3 hour 0.50 >More info 0.19 >More info whole roots standard Original data GEO bulk
239 embryo ABA 0.50 >More info 0.19 >More info embryo-control ABA embryo Original data GEO bulk
240 Fe starvation 3 h 0.50 >More info 0.19 >More info Control Original data GEO bulk
241 Red/FR Light45min 0.10 >More info 0.59 >More info FarRed Light 45min Original data Light treatments
242 Wounding Stress3 h (root) -0.52 >More info -0.16 >More info Stress mock 3 h (root) Original data Stress treatments
243 ga1-3 1h GA4 -0.52 >More info -0.15 >More info ga1-3 1h water shoots Original data GEO bulk
244 24h +Pi -0.59 >More info -0.08 >More info 24h -Pi root Original data GEO bulk
245 ckh1 CK25 0.58 >More info 0.09 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
246 RRE1 0.50 >More info 0.16 >More info Col C Original data GEO bulk
247 G3P 0.16 >More info 0.50 >More info Mock distal leaves Original data GEO bulk
248 FLIGHT BRIC G PDFU-112 seedlings 0.58 >More info 0.06 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
249 Laer pretreat GA Flg22 1h -0.07 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
250 cngc1-3 0.50 >More info 0.13 >More info Col-0 root Original data GEO bulk
251 ptpks2 -0.02 >More info -0.61 >More info Col-WT leaves Original data GEO bulk
252 phyABDE 4-day dark- 2 hours Rc50 -0.10 >More info -0.53 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
253 amiRAP hypoxic -0.50 >More info -0.10 >More info hypoxic hypoxia Original data GEO bulk
254 WT 3H Cold 0.05 >More info 0.54 >More info WT control Original data GEO bulk
255 tga1 tga4 2h KNO3 0.51 >More info 0.08 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
256 sfr6 drought -0.07 >More info -0.51 >More info WT drought All aerial tissue Original data GEO bulk
257 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
258 WT (Ler) CK25 0.00 >More info -0.56 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
259 UV Stress 24 h (root) -0.53 >More info -0.01 >More info Stress mock 24 h (root) Original data Stress treatments
260 cat2-2; 8h switch to ambient CO2 concentrations; 0.03 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
261 ACN1-2 Sucrose -0.55 >More info 0.02 >More info Col-7 Sucrose Original data GEO bulk
262 Mutant iaa17-6 (IAA) 0.51 >More info 0.02 >More info Col (IAA) Original data GEO bulk
263 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
264 gun1-9 control 0.52 >More info -0.02 >More info Col-0 control Original data GEO bulk
265 ckh2 CK25 0.50 >More info -0.02 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
266 3x(p) -0.11 >More info 0.56 >More info 2x two week old seedlings Original data
267 long 17-degree- 0.13 >More info -0.58 >More info control long Original data GEO bulk
268 abi1 hypocotyl -0.07 >More info 0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
269 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.51 >More info 0.10 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
270 ckh2 CK0 0.55 >More info -0.17 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
271 4d red light grown hmr-22 seedlings 0.55 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
272 triplod male excess 0.50 >More info -0.22 >More info tetraploid Original data GEO bulk