4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 8 hr ammonium
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List of experiments correlated with "8 hr ammonium"  Help Download transcriptome of top 30
Score Experiment Correlation from
8 hr ammonium		 Correlation to
8 hr ammonium		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 8 hr ammonium 1.00 >More info 1.00 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
2 1.5 hr ammonium 0.79 >More info 0.86 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
3 8 hr nitrate 0.83 >More info 0.78 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
4 1.5 hr nitrate 0.63 >More info 0.70 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
5 Cd 18h root -0.56 >More info -0.70 >More info WT-Untreated Root Original data GEO bulk
6 Root submergence 7h 0.54 >More info 0.57 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
7 root - 01% oxygen - 2h 0.34 >More info 0.75 >More info root - 21% oxygen - 2h Original data GEO bulk
8 toc1-1-77hr 0.50 >More info 0.58 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
9 Aerobic e1 ate2 0.30 >More info 0.77 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
10 Laer pretreat GA Flg22 1h 0.32 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
11 Shoot dark control 7h 0.51 >More info 0.51 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
12 Root dark control 7h 0.50 >More info 0.52 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
13 Whole root - low pH 48H 0.37 >More info 0.65 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
14 vte1-1 3d vernalization -0.53 >More info -0.47 >More info WT 3d vernalization Original data GEO bulk
15 Ws 2h KNO3 0.39 >More info 0.61 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
16 Atss3 Light1 -0.46 >More info -0.53 >More info Atss3 Dark0.5 Original data GEO bulk
17 Aerobic prt6 0.37 >More info 0.62 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
18 Nicotinamide-49hr 0.47 >More info 0.51 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
19 Root submergence 24h 0.44 >More info 0.54 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
20 Leafminer damaged seedlings 0.40 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
21 root - 04% oxygen - 2h 0.27 >More info 0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
22 Col BTH 0.28 >More info 0.67 >More info Col rosettes Original data GEO bulk
23 P35S:rGRF1 0.54 >More info 0.41 >More info Col-0 Original data GEO bulk
24 oas-a1.1 Cd 18h 0.45 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
25 Heat shock optimum 0.30 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
26 Atss3 Light4 -0.52 >More info -0.42 >More info Atss3 Dark0.5 Original data GEO bulk
27 Col(gl) 0mM NaCl 0.51 >More info 0.42 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
28 rdr1-1 -0.51 >More info -0.42 >More info Col-0 Original data GEO bulk
29 Col(gl) leaf 0mM NaCl 0.51 >More info 0.42 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
30 Col0-PsmES4326-24hpi 0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
31 WT Shoot Hypoxia 0.24 >More info 0.68 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
32 2hr continuous KNO3 and MSX PeR cell 0.31 >More info 0.60 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
33 oas-a1.1 root -0.34 >More info -0.54 >More info WT-Untreated Root Original data GEO bulk
34 E.orontii Infection 3 day 0.36 >More info 0.52 >More info Uninfection 3 day Original data Elicitor treatments
35 Split KNO3 roots - 2hours 0.36 >More info 0.52 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
36 cngc4 0.28 >More info 0.60 >More info Ws-2 Seedlings Original data GEO bulk
37 tmm1-inflorescence-tips -0.29 >More info -0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
38 Mutant lwd1_lwd2 0.30 >More info 0.56 >More info Wildtype for phy mutants Original data GEO bulk
39 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.30 >More info 0.56 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
40 8hr-pH4.5 0.31 >More info 0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
41 root hypoxia total 0.28 >More info 0.58 >More info root control total Original data GEO bulk
42 2hr continuous KNO3 EPR cell 0.26 >More info 0.60 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
43 6h volatiles Sm. R3089 0.31 >More info 0.54 >More info 6h untreated whole seedling Original data GEO bulk
44 SA 24h 0.26 >More info 0.59 >More info EtOH 24h 24hr Original data GEO bulk
45 Col-0 2HS 0.24 >More info 0.61 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
46 root - 08% oxygen - 48h 0.06 >More info 0.78 >More info root - 21% oxygen - 48h Original data GEO bulk
47 root - 08% oxygen - 2h 0.07 >More info 0.77 >More info root - 21% oxygen - 2h Original data GEO bulk
48 roottip hypoxia total 0.30 >More info 0.54 >More info roottip control total Original data GEO bulk
49 WT Root Hypoxia 0.20 >More info 0.64 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
50 myb3 myb3r4d 0.19 >More info 0.64 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
51 IAA 2h 0.25 >More info 0.58 >More info control 2h root Original data GEO bulk
52 250uM K-nitrate 20min roots 0.27 >More info 0.54 >More info 250uM KCl 20min roots Roots Original data GEO bulk
53 Col-0 wt Hypoxic 0.16 >More info 0.64 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
54 F1 hybrid submerged 0.28 >More info 0.50 >More info F1 hybrid air Original data GEO bulk
55 ein2 mutant roots mock -0.28 >More info -0.50 >More info roots mock Original data GEO bulk
56 cca1-lhy 60m light 0.25 >More info 0.52 >More info 60m light whole seedlings Original data GEO bulk
57 hrpA fliC 7h 0.25 >More info 0.52 >More info Mock 7h hrpA fliC Original data GEO bulk
58 seedling 12h after HZE atm-1 0.23 >More info 0.53 >More info seedling day 1 unirradiated atm-1 12h Original data
59 seedling 12h after Gamma atm-1 0.24 >More info 0.52 >More info seedling day 1 unirradiated atm-1 12h Original data
60 Col 0 2h KNO3 0.17 >More info 0.58 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
61 Elevated CO2 LIMITING N DAY -0.25 >More info -0.50 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
62 CLO 4mM 0.21 >More info 0.52 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
63 siliques AtHb1 control 0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
64 16h Col-0 0.21 >More info 0.52 >More info 00h Col-0 Original data GEO bulk
65 irradiated leaf (WT 5d) -0.17 >More info -0.55 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
66 shoot hypoxia total 0.11 >More info 0.61 >More info shoot control total Original data GEO bulk
67 20h Col-0 0.16 >More info 0.55 >More info 00h Col-0 Original data GEO bulk
68 iron minus 6 h -0.52 >More info -0.19 >More info iron +6 h root Original data GEO bulk
69 MPK6 ox Shoot Hypoxia 0.14 >More info 0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
70 root - 04% oxygen - 48h 0.01 >More info 0.69 >More info root - 21% oxygen - 48h Original data GEO bulk
71 brat1nrpe1 0.03 >More info 0.66 >More info WT Original data
72 AFB1 0h 0.19 >More info 0.50 >More info Col 0h Leaf Original data GEO bulk
73 sex1-3 0.13 >More info 0.55 >More info Col-WT leaves Original data GEO bulk
74 IAA7mII over-expressor IAA Treated -0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
75 nrpe1 0.07 >More info 0.59 >More info WT Original data
76 Full C2 T3 -0.09 >More info -0.57 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
77 P.syringae vir 4 h (leaf) 0.12 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
78 root - 04% oxygen - 30min 0.05 >More info 0.57 >More info root - 21% oxygen - 30min Original data GEO bulk
79 bri1-116 -0.11 >More info 0.73 >More info Col seedling Original data GEO bulk
80 SA 3h 0.12 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
81 20m.KCl -0.05 >More info -0.56 >More info To. KCl 14 day old Roots Original data GEO bulk
82 35S:PCO1 hypoxia -0.09 >More info -0.51 >More info WT hypoxia whole rosette Original data
83 root - 01% oxygen - 48h 0.08 >More info 0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
84 12m.KNO3 0.06 >More info 0.51 >More info To. KNO3 14 day old Roots Original data GEO bulk
85 seed germinating in countinuous light 24h SL -0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
86 Shoot submergence 7h 0.54 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
87 Shoot apex inflorescence (after bolting) -0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
88 Whole root - low pH 12H 0.04 >More info 0.50 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
89 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
90 root - 08% oxygen - 30min -0.22 >More info 0.71 >More info root - 21% oxygen - 30min Original data GEO bulk