4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on vte1-1 3d vernalization
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List of experiments correlated with "vte1-1 3d vernalization"  Help Download transcriptome of top 30
Score Experiment Correlation from
vte1-1 3d vernalization		 Correlation to
vte1-1 3d vernalization		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 vte1-1 3d vernalization 1.00 >More info 1.00 >More info WT 3d vernalization Original data GEO bulk
2 seedling 1.5h after HZE atm-1 -0.72 >More info -0.76 >More info seedling day 1 unirradiated atm-1 1.5h Original data
3 Root dark control 7h -0.64 >More info -0.70 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
4 WT (Col) glucose 0.59 >More info 0.71 >More info WT (Col) glucose seedlings Original data GEO bulk
5 Root submergence 7h -0.64 >More info -0.64 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
6 mutant acs6E (single mutant) 0.63 >More info 0.65 >More info col control (single mutant) Original data GEO bulk
7 seedling 1.5h after HZE WT -0.62 >More info -0.63 >More info seedling day 1 unirradiated WT 1.5h Original data
8 Shoot dark control 7h -0.57 >More info -0.66 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
9 Night Time Treatment 0.55 >More info 0.67 >More info Night Time Control 1hr white light pulse aerial rosette Original data
10 toc1-1-53hr -0.54 >More info -0.68 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
11 Atss3 Light1 0.59 >More info 0.63 >More info Atss3 Dark0.5 Original data GEO bulk
12 M6PR transgenic 0mM NaCl -0.63 >More info -0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
13 Root dark control 24h -0.59 >More info -0.63 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
14 toc1-1-73hr -0.51 >More info -0.71 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
15 4d red light grown hmr-5 seedlings -0.58 >More info -0.63 >More info 4d red light grown WT(Col-0) seedlings Original data
16 M6PR transgenic leaf 0mM NaCl -0.58 >More info -0.63 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
17 toc1-1-77hr -0.42 >More info -0.78 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
18 Root submergence 24h -0.56 >More info -0.62 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
19 Dark 6h ivd -0.64 >More info -0.54 >More info 0h ivd Original data
20 COL-0-Fe--shoot 0.61 >More info 0.57 >More info COL-0-Ctrl--shoot shoot Original data
21 max3GR24 (1 uM) 0.59 >More info 0.58 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
22 root - 01% oxygen - 2h -0.49 >More info -0.68 >More info root - 21% oxygen - 2h Original data GEO bulk
23 Col(gl) 0mM NaCl -0.54 >More info -0.61 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
24 WT Na2S 0.53 >More info 0.62 >More info WT water Na2S leaf Original data GEO bulk
25 Col(gl) leaf 0mM NaCl -0.54 >More info -0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
26 Cd 18h root 0.48 >More info 0.66 >More info WT-Untreated Root Original data GEO bulk
27 sdg8-2 mutant 0.58 >More info 0.55 >More info wild type leaf Original data GEO bulk
28 pip3 At2g19270 RNAi 24 0.54 >More info 0.57 >More info Nd-1 whole plant Original data GEO bulk
29 hepta mutant (higher order mutant) -0.62 >More info -0.49 >More info col control (higher order mutant) Original data GEO bulk
30 SOS1 0mM NaCl -0.57 >More info -0.53 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
31 30m light 0.36 >More info 0.74 >More info before light whole seedlings Original data GEO bulk
32 Day Time Treatment 0.46 >More info 0.64 >More info Day Time Control 1hr white light pulse aerial rosette Original data
33 Cocultivation 8 hrs leaf -0.58 >More info -0.50 >More info Mock cocultivation 8 hrs leaf Leaf Original data
34 anti-sense for AtAOX1a -0.62 >More info -0.46 >More info WT Original data GEO bulk
35 oas-a1.1 root 0.39 >More info 0.69 >More info WT-Untreated Root Original data GEO bulk
36 Shoot submergence 24h -0.50 >More info -0.57 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
37 24h volatiles Sp. HRO-C48 -0.48 >More info -0.59 >More info 24h untreated whole seedling Original data GEO bulk
38 RGA-GR-DEX -0.42 >More info -0.64 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
39 1 h Light Total RNA 0.39 >More info 0.67 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
40 mutant acs2B (single mutant) 0.56 >More info 0.48 >More info col control (single mutant) Original data GEO bulk
41 pip3 At2g19270 RNAi 32 0.50 >More info 0.53 >More info Nd-1 whole plant Original data GEO bulk
42 Nicotinamide-73hr -0.47 >More info -0.56 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
43 cngc4 -0.36 >More info -0.67 >More info Ws-2 Seedlings Original data GEO bulk
44 wavy -0.54 >More info -0.48 >More info WT Original data GEO bulk
45 Heat no recovery 0.60 >More info 0.42 >More info Mock no recovery seedling Original data GEO bulk
46 HRE1-RNAi20 normoxia 0.53 >More info 0.49 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
47 Red/FR Light45min 0.24 >More info 0.78 >More info FarRed Light 45min Original data Light treatments
48 Shoot dark control 24h -0.44 >More info -0.58 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
49 essp4/sdg8-5 mutant 0.55 >More info 0.45 >More info wild type leaf Original data GEO bulk
50 miR mutant (higher order mutant) -0.57 >More info -0.43 >More info col control (higher order mutant) Original data GEO bulk
51 toc1-1-49hr -0.48 >More info -0.52 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
52 8 hr ammonium -0.47 >More info -0.53 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
53 WT Root Hypoxia -0.41 >More info -0.59 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
54 AmGSTF1 expressor -0.42 >More info -0.58 >More info WT leaf tissue Original data GEO bulk
55 4C 1h -0.45 >More info -0.55 >More info 4C 0h Original data GEO bulk
56 dde2-2 24hpi A. brassicicola 0.43 >More info 0.57 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
57 sex1-3 -0.41 >More info -0.58 >More info Col-WT leaves Original data GEO bulk
58 ape2 low light -0.34 >More info -0.65 >More info Ws-2 low light Original data GEO bulk
59 OsRLCK253 expressing 0.39 >More info 0.59 >More info WT seedlings Original data GEO bulk
60 phr1 Shoot-Pi -0.50 >More info -0.47 >More info WT Root-Pi shoots Original data GEO bulk
61 Dark 6h hml -0.53 >More info -0.44 >More info 0h hml Original data
62 4h decapitation 0.41 >More info 0.56 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
63 ANOXIA -0.26 >More info -0.71 >More info ANOXIA+SUCROSE Original data GEO bulk
64 low CO2 + light -0.40 >More info -0.56 >More info normal CO2 + light Original data GEO bulk
65 Dark 6h wt -0.53 >More info -0.43 >More info 0h wt Original data
66 1.5 hr ammonium -0.41 >More info -0.55 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
67 ein2-1 +elf18 2h 0.44 >More info 0.52 >More info WT +elf18 2h elf18 Original data GEO bulk
68 WT +Pep2 10h -0.51 >More info -0.44 >More info WT untreated Pep2 Original data GEO bulk
69 gun1-9 control 0.33 >More info 0.62 >More info Col-0 control Original data GEO bulk
70 M6PR transgenic 100mM NaCl -0.67 >More info -0.27 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
71 upb1-1 elongation zone 0.26 >More info 0.68 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
72 vtc2 (I) -0.51 >More info -0.43 >More info Col (I) rosette Original data GEO bulk
73 Laer GA 2h -0.39 >More info -0.54 >More info Laer Control leaf discs Original data GEO bulk
74 seedling mSPL13 -0.58 >More info -0.35 >More info seedling Col-0 Original data GEO bulk
75 Nicotinamide-69hr -0.43 >More info -0.50 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
76 3x(p) -0.27 >More info -0.65 >More info 2x two week old seedlings Original data
77 8 hr nitrate -0.51 >More info -0.41 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
78 SOS1 100mM NaCl -0.61 >More info -0.31 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
79 leaf blade in D -0.34 >More info -0.58 >More info leaf blade in WL leaf blades Original data GEO bulk
80 ptpks2 0.21 >More info 0.71 >More info Col-WT leaves Original data GEO bulk
81 rdr1-1 0.36 >More info 0.55 >More info Col-0 Original data GEO bulk
82 camta1-2 -0.36 >More info -0.55 >More info Col-0-WT Original data GEO bulk
83 Whole root - S 3H 0.32 >More info 0.59 >More info Whole root - S 0H Original data GEO bulk
84 ape2 high light -0.30 >More info -0.61 >More info Ws-2 high light Original data GEO bulk
85 gun4-1 -0.38 >More info -0.52 >More info WT Col-0 seedling Original data GEO bulk
86 60m light 0.33 >More info 0.57 >More info before light whole seedlings Original data GEO bulk
87 Laer Flg22(Agrobacterium) 2h -0.33 >More info -0.56 >More info Laer Control leaf discs Original data GEO bulk
88 low CO2 + dark -0.34 >More info -0.55 >More info normal CO2 + light Original data GEO bulk
89 sfr6 drought 0.34 >More info 0.55 >More info WT drought All aerial tissue Original data GEO bulk
90 abi4-102 (I) -0.35 >More info -0.54 >More info Col (I) rosette Original data GEO bulk
91 spch -0.35 >More info -0.54 >More info Col-0 WT whole seedling Original data GEO bulk
92 ein2-1 24hpi A. brassicicola 0.39 >More info 0.50 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
93 OsSAP11 expressing 0.37 >More info 0.51 >More info WT seedlings Original data GEO bulk
94 F1 hybrid submerged -0.34 >More info -0.53 >More info F1 hybrid air Original data GEO bulk
95 pip3 At2g19270 TDNA 9 -0.31 >More info -0.56 >More info Col-0 whole plant Original data GEO bulk
96 AgNO3 3 h -0.27 >More info -0.60 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
97 mil4 sid2 -0.34 >More info -0.52 >More info Col rosettes Original data GEO bulk
98 tmm1-inflorescence-tips 0.31 >More info 0.54 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
99 petiole in D -0.35 >More info -0.50 >More info petiole in WL petioles Original data GEO bulk
100 phyB mutant 22C 10hrs 0.35 >More info 0.50 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
101 ein2 mutant roots mock 0.25 >More info 0.60 >More info roots mock Original data GEO bulk
102 bHLH122 ox 0.30 >More info 0.53 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
103 Pseudomonas -0.22 >More info -0.61 >More info Control pseudomonas treated whole seedling Original data GEO bulk
104 root hypoxia total -0.27 >More info -0.55 >More info root control total Original data GEO bulk
105 Col-7 Sucrose 0.54 >More info 0.27 >More info col-7 Original data GEO bulk
106 entire vegetative rosette -0.50 >More info -0.31 >More info Col-0 Mock WL entire vegetative rosette Original data
107 mkk2 control rep -0.31 >More info -0.50 >More info Col-0 Time 0 rep Original data GEO bulk
108 seedling 24h after Gamma atm-1 0.31 >More info 0.50 >More info seedling day 2 unirradiated atm-1 24h Original data
109 1 h Light IP RNA 0.18 >More info 0.62 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
110 24h volatiles Sm. R3089 -0.30 >More info -0.50 >More info 24h untreated whole seedling Original data GEO bulk
111 2hr transitory KNO3 EPR cell -0.21 >More info -0.59 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
112 Col-0 2HS -0.24 >More info -0.55 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
113 Red Light 4 h -0.28 >More info -0.50 >More info White Light 4 h Original data Light treatments
114 Cs shoot 0.20 >More info 0.58 >More info control shoot Original data GEO bulk
115 4d red light grown hmr-22 seedlings -0.57 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
116 hen1 0.50 >More info 0.26 >More info Ler Original data GEO bulk
117 CBF3 100mM NaCl -0.51 >More info -0.25 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
118 ein2-1 untreated 0.26 >More info 0.50 >More info WT untreated untreated Original data GEO bulk
119 FAMA induced 48h 0.52 >More info 0.22 >More info control 48h Whole seedling Original data GEO bulk
120 Mutant lwd1_lwd2 -0.14 >More info -0.60 >More info Wildtype for phy mutants Original data GEO bulk
121 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.14 >More info -0.60 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
122 Cs root 0.18 >More info 0.56 >More info control root Original data GEO bulk
123 3x(m) -0.19 >More info -0.55 >More info 2x two week old seedlings Original data
124 sav1-1 light -0.15 >More info -0.58 >More info Col-0 light seedlings Original data GEO bulk
125 ex1 flu dark 8hours/30 minute light -0.20 >More info -0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
126 roottip hypoxia total -0.13 >More info -0.59 >More info roottip control total Original data GEO bulk
127 Laer pretreat GA Flg22 1h 0.01 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
128 cdm1 mutant floral young floral buds 0.54 >More info 0.17 >More info WT floral yound floral buds Unopen flower buds Original data
129 seed germinating in countinuous light 24h SL 0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
130 ACC 3 h -0.12 >More info -0.59 >More info Mock 3 h Original data Basic hormone treatment of seedlings
131 whole roots -Fe 6 hour -0.20 >More info -0.51 >More info whole roots standard Original data GEO bulk
132 Heat shock optimum 0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
133 Col0-PsmES4326-24hpi 0.09 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
134 toc1-1-85hr -0.16 >More info -0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
135 Whole root - low pH 12H -0.16 >More info -0.51 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
136 shoot-10 μM DEX- 12 hr -0.13 >More info -0.53 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
137 CeO2 germinant 0.09 >More info 0.56 >More info Millipore Water germinant CeO2 seedling Original data
138 TNT-seedlings 0.05 >More info -0.70 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
139 abi1 hypocotyl -0.13 >More info -0.50 >More info Ler hypocotyl hypocotyl Original data GEO bulk
140 bbx24 in Simulated Shade -0.01 >More info 0.64 >More info WT in simulated shade shade seedling Original data
141 Col-0 wt Hypoxic -0.04 >More info -0.58 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
142 2hr transitory KNO3 PrR cell -0.07 >More info -0.54 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
143 root - 04% oxygen - 2h -0.08 >More info -0.53 >More info root - 21% oxygen - 2h Original data GEO bulk
144 Fei-0-30min IAA 0.11 >More info 0.50 >More info Fei-0-0h IAA whole plant Original data GEO bulk
145 seedling 3h after HZE WT -0.62 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
146 root - 04% oxygen - 48h -0.04 >More info -0.55 >More info root - 21% oxygen - 48h Original data GEO bulk
147 root - 08% oxygen - 2h -0.01 >More info -0.58 >More info root - 21% oxygen - 2h Original data GEO bulk
148 NJ15 0.08 >More info 0.51 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
149 CCA1-ox 6am non-polysomal 0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
150 Col leaf scrape 5 dpi 0.50 >More info 0.08 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
151 short 17-degree- 0.03 >More info 0.54 >More info control short Original data GEO bulk
152 gir flower 33d -0.51 >More info -0.04 >More info Col-7 flower 33d flower Original data GEO bulk
153 Col BTH -0.12 >More info 0.67 >More info Col rosettes Original data GEO bulk
154 Shoot submergence 7h -0.54 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
155 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
156 Lip0 UV 0.01 >More info -0.51 >More info Lip0 mock UV seedling Original data
157 Imbibed 24 h ABA 30uM (seed) 0.04 >More info -0.51 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
158 Shoot apex inflorescence (after bolting) -0.19 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
159 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
160 siliques AtHb1 control -0.08 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
161 Leafminer damaged seedlings -0.43 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk