4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on mkk2 control rep
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List of experiments correlated with "mkk2 control rep"  Help Download transcriptome of top 30
Score Experiment Correlation from
mkk2 control rep		 Correlation to
mkk2 control rep		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 mkk2 control rep 1.00 >More info 1.00 >More info Col-0 Time 0 rep Original data GEO bulk
2 mkk1 control rep 0.93 >More info 0.91 >More info Col-0 Time 0 rep Original data GEO bulk
3 mkk1 24h BTH rep 0.82 >More info 0.87 >More info Col-0 24h BTH rep Original data GEO bulk
4 mkk2 24h BTH rep 0.82 >More info 0.82 >More info Col-0 24h BTH rep Original data GEO bulk
5 shl-2 Pool 0.71 >More info 0.76 >More info Ler Pool seedling Original data GEO bulk
6 TaFLS overexpression line (OE2) 0.76 >More info 0.70 >More info Col-0 Rosette leaves Original data
7 mutant acs2C (single mutant) 0.74 >More info 0.67 >More info col control (single mutant) Original data GEO bulk
8 M6PR transgenic leaf 0mM NaCl 0.69 >More info 0.70 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
9 sid2 0.68 >More info 0.70 >More info Col rosettes Original data GEO bulk
10 Pseudomonas 0.70 >More info 0.68 >More info Control pseudomonas treated whole seedling Original data GEO bulk
11 WOX1-1 0.70 >More info 0.66 >More info Col-0 aerial part Original data
12 mil4 sid2 0.69 >More info 0.66 >More info Col rosettes Original data GEO bulk
13 Night Time Treatment -0.67 >More info -0.68 >More info Night Time Control 1hr white light pulse aerial rosette Original data
14 MYB12OX/tt4 0.64 >More info 0.70 >More info Col-0 aerial part Original data
15 mil4 0.61 >More info 0.72 >More info Col rosettes Original data GEO bulk
16 6h volatiles Sm. R3089 0.66 >More info 0.67 >More info 6h untreated whole seedling Original data GEO bulk
17 mutant acs9B (single mutant) 0.73 >More info 0.56 >More info col control (single mutant) Original data GEO bulk
18 fls1-3 0.65 >More info 0.64 >More info Col-0 Rosette leaves Original data
19 pap1-D/tt4 0.62 >More info 0.66 >More info Col-0 aerial part Original data
20 Atss3 Light4 -0.66 >More info -0.61 >More info Atss3 Dark0.5 Original data GEO bulk
21 Atss3 Light1 -0.62 >More info -0.65 >More info Atss3 Dark0.5 Original data GEO bulk
22 24h volatiles Sm. R3089 0.58 >More info 0.69 >More info 24h untreated whole seedling Original data GEO bulk
23 mkk1/mkk2 control rep 0.65 >More info 0.62 >More info Col-0 Time 0 rep Original data GEO bulk
24 WT drought -0.60 >More info -0.66 >More info WT control All aerial tissue Original data GEO bulk
25 Protoplast Induced -0.66 >More info -0.60 >More info Uninduced Original data GEO bulk
26 sfr2 control -0.69 >More info -0.57 >More info WT control All aerial tissue Original data GEO bulk
27 Shoot dark control 7h 0.65 >More info 0.59 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
28 MIL4 ox 0.61 >More info 0.62 >More info Col Original data GEO bulk
29 CBF3 0mM NaCl 0.67 >More info 0.55 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
30 Col(gl) 0mM NaCl 0.60 >More info 0.62 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
31 Col(gl) leaf 0mM NaCl 0.60 >More info 0.62 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
32 camta1-2 0.59 >More info 0.63 >More info Col-0-WT Original data GEO bulk
33 tt4 0.55 >More info 0.65 >More info Col-0 aerial part Original data
34 Leaf wounded -0.57 >More info -0.63 >More info Leaf control vegetative leaf Original data GEO bulk
35 A. halleri 0.69 >More info 0.51 >More info A. thaliana mature leaves before flowering Original data GEO bulk
36 petiole in D 0.56 >More info 0.63 >More info petiole in WL petioles Original data GEO bulk
37 mutant acs1A (single mutant) 0.67 >More info 0.51 >More info col control (single mutant) Original data GEO bulk
38 Heat shock optimum 0.53 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
39 Day Time Treatment -0.57 >More info -0.58 >More info Day Time Control 1hr white light pulse aerial rosette Original data
40 pap1-D 0.59 >More info 0.56 >More info Col-0 aerial part Original data
41 Col-0 Mock Shade 0.76 >More info 0.38 >More info Col-0 Mock WL seedlings Original data
42 TaFLS overexpression line (OE1) 0.63 >More info 0.51 >More info Col-0 Rosette leaves Original data
43 35S:GIF 0.56 >More info 0.57 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
44 E.orontii Infection 3 day 0.55 >More info 0.57 >More info Uninfection 3 day Original data Elicitor treatments
45 mutant acs4A (single mutant) 0.59 >More info 0.53 >More info col control (single mutant) Original data GEO bulk
46 Leaf systemic -0.43 >More info -0.67 >More info Leaf control vegetative leaf Original data GEO bulk
47 Mutant lwd1_lwd2 0.50 >More info 0.59 >More info Wildtype for phy mutants Original data GEO bulk
48 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.50 >More info 0.59 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
49 Shoot dark control 24h 0.62 >More info 0.47 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
50 Col-0 DEX Shade 0.52 >More info 0.57 >More info Col-0 DEX WL seedlings Original data
51 G3P -0.57 >More info -0.52 >More info Mock distal leaves Original data GEO bulk
52 6h volatiles Sp. HRO-C48 0.48 >More info 0.61 >More info 6h untreated whole seedling Original data GEO bulk
53 WT hypoxia 0.53 >More info 0.55 >More info WT normoxia whole rosette Original data
54 seedling 24h after Gamma atm-1 -0.51 >More info -0.57 >More info seedling day 2 unirradiated atm-1 24h Original data
55 mkk1/mkk2 24h BTH rep 0.51 >More info 0.57 >More info Col-0 24h BTH rep Original data GEO bulk
56 miR 0h -0.54 >More info -0.53 >More info Col 0h Leaf Original data GEO bulk
57 Shoot submergence 24h 0.60 >More info 0.47 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
58 WT Red light 1h -0.50 >More info -0.56 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
59 leaf blade in FRD 0.46 >More info 0.60 >More info leaf blade in WL leaf blades Original data GEO bulk
60 aerial organ callus inducing medium 12 h 0.49 >More info 0.57 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
61 arr10 arr12 -0.50 >More info -0.55 >More info WT Original data GEO bulk
62 oxt6:AtCPSF30 line 0.55 >More info 0.49 >More info oxt6 mutant Original data GEO bulk
63 amiR-tor induced 3d -0.52 >More info -0.52 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
64 Col-0 WT HL 3h -0.56 >More info -0.47 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
65 M6PR transgenic 0mM NaCl 0.56 >More info 0.47 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
66 A. lyrata 0.64 >More info 0.39 >More info A. thaliana mature leaves before flowering Original data GEO bulk
67 2d dark-grown WT(Col-0)/1 hr red light -0.47 >More info -0.56 >More info 2d dark-grown WT seedling Original data GEO bulk
68 petiole in FRD 0.46 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
69 sim smr1 0.36 >More info 0.67 >More info WT seedling Original data GEO bulk
70 cpr5 sim smr1 0.47 >More info 0.56 >More info WT seedling Original data GEO bulk
71 npr1 0.46 >More info 0.56 >More info WT(COL) Original data GEO bulk
72 erf104-ko H2O 4h -0.54 >More info -0.47 >More info Col-0 H2O 4h Original data GEO bulk
73 leaf blade in D 0.44 >More info 0.57 >More info leaf blade in WL leaf blades Original data GEO bulk
74 Dark 40min pls UV-AB 5min -0.57 >More info -0.43 >More info Dark 45 min Original data Light treatments
75 Shoot apex inflorescence (after bolting) 0.35 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 30m light -0.32 >More info -0.68 >More info before light whole seedlings Original data GEO bulk
77 12h volatiles Sm. R3089 0.32 >More info 0.68 >More info 12h untreated whole seedling Original data GEO bulk
78 rGRF3x35S:GIF 0.49 >More info 0.51 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
79 Dark 40 min pls UV-A 5 min -0.51 >More info -0.48 >More info Dark 45 min Original data Light treatments
80 60m light -0.31 >More info -0.68 >More info before light whole seedlings Original data GEO bulk
81 dde2-2 24hpi A. brassicicola -0.47 >More info -0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
82 Light 4h polysome-bound -0.53 >More info -0.44 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
83 WT-Dry -0.53 >More info -0.44 >More info WT-CK dehydration treatment 1h Original data
84 Drought Stress 24 h (shoot) 0.42 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
85 seedling 3h after Gamma WT -0.51 >More info -0.45 >More info seedling day 1 unirradiated WT 3h Original data
86 Red Light 4 h 0.41 >More info 0.55 >More info White Light 4 h Original data Light treatments
87 Polysomal RNA 35S:AtCSP1-FH1 0.36 >More info 0.60 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
88 tumour 0.40 >More info 0.55 >More info non-tumor tumour Original data GEO bulk
89 des1 water -0.45 >More info -0.50 >More info WT water water leaf Original data GEO bulk
90 Red/FR Light 4 h 0.53 >More info 0.41 >More info FarRed Light 4 h Original data Light treatments
91 Rose Bengal 0.5 uM -0.36 >More info -0.57 >More info Control RB and PER Rose Bengal Original data
92 cat2-long-day 4d 0.51 >More info 0.41 >More info Col0-LD4 transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
93 Col-0 shade 0.42 >More info 0.50 >More info Col-0 light seedlings Original data GEO bulk
94 ANOXIA 0.39 >More info 0.52 >More info ANOXIA+SUCROSE Original data GEO bulk
95 WT H2O2 3h -0.51 >More info -0.39 >More info WT water 3h 3h_H2O2 Original data GEO bulk
96 Col(gl) leaf 100mM NaCl 0.55 >More info 0.35 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
97 Col(gl) 100mM NaCl 0.55 >More info 0.35 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
98 Polysomal RNA 35S:HF-RPL18 cold -0.35 >More info -0.55 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
99 Dark 6h wt 0.55 >More info 0.34 >More info 0h wt Original data
100 Light 0.5h steady-state -0.51 >More info -0.38 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
101 mutant acs5D (single mutant) 0.51 >More info 0.38 >More info col control (single mutant) Original data GEO bulk
102 camta1 leaf water 0.37 >More info 0.52 >More info Col-0 leaf water leaf Original data GEO bulk
103 gapcp1gapcp2 ABA 0.31 >More info 0.58 >More info WT ABA ABA seedling Original data GEO bulk
104 low R/FR JA spray 0.38 >More info 0.50 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
105 seed germinating in countinuous light 24h SL 0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
106 Mutant gh3.5-1D 0.51 >More info 0.36 >More info Col-0 Original data GEO bulk
107 root - 08% oxygen - 2h 0.25 >More info 0.62 >More info root - 21% oxygen - 2h Original data GEO bulk
108 PsJN 0.37 >More info 0.50 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
109 HARAP aerobic 0.29 >More info 0.58 >More info WT aerobic aerobic Original data GEO bulk
110 NahG 0.30 >More info 0.56 >More info Col-0 Leaves Original data GEO bulk
111 gpa1 +ABA LF 0.36 >More info 0.50 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
112 Dark 6h hml 0.54 >More info 0.31 >More info 0h hml Original data
113 1 h Light Total RNA -0.32 >More info -0.53 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
114 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
115 pab total -0.58 >More info -0.26 >More info WT total seedling shoot/aerial seedling Original data
116 Rsch 3d 0.31 >More info 0.52 >More info Rsch CA Leaves Original data
117 CBF3 100mM NaCl 0.56 >More info 0.26 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
118 tunicamycin -0.29 >More info -0.53 >More info DMF Original data GEO bulk
119 GST-overexpression seedlings control -0.31 >More info -0.51 >More info WT seedlings control Seedlings Original data
120 bri1-116 0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
121 vte1-1 3d vernalization -0.50 >More info -0.31 >More info WT 3d vernalization Original data GEO bulk
122 estradiole-induced ANAC059 -0.27 >More info -0.54 >More info transgenic (empty vector inducible system) Original data GEO bulk
123 Root dark control 7h 0.53 >More info 0.27 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
124 Mutant lfy-12(shoot apex) -0.50 >More info -0.30 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
125 rdr6-15 0.51 >More info 0.29 >More info Col-0 Original data GEO bulk
126 hexa mutant (higher order mutant) 0.54 >More info 0.23 >More info col control (higher order mutant) Original data GEO bulk
127 bio4-1 mutant leaves 0.25 >More info 0.52 >More info WT leaves leaves Original data GEO bulk
128 Te 1d 0.23 >More info 0.52 >More info Te CA Leaves Original data
129 ex2 flu dark 8hours/30 minute light -0.16 >More info -0.58 >More info col dark 8hours/30 minute light Original data GEO bulk
130 Laer pretreat GA Flg22 1h 0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
131 swn-7 0.51 >More info 0.18 >More info Col whole plant Original data GEO bulk
132 35S:RPS4 rrs1-11 2h 0.51 >More info 0.17 >More info 35S:RPS4 2h leaves Original data
133 12h volatiles Sp. HRO-C48 0.50 >More info 0.18 >More info 12h untreated whole seedling Original data GEO bulk
134 IRP1-OE-Ctrl--shoot -0.54 >More info -0.13 >More info COL-0-Ctrl--shoot shoot Original data
135 protoplasts T1 [flg22] -0.13 >More info -0.51 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
136 Shoot submergence 7h 0.63 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
137 SHR-GR Time 3H Dex 0.11 >More info 0.50 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
138 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
139 pad4-est1b-1-doublemutant 0.55 >More info -0.00 >More info pad4-mutant developed rosette leaves Original data GEO bulk
140 Leafminer damaged seedlings -0.01 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
141 Col0-PsmES4326-24hpi -0.08 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
142 IAA7mII over-expressor IAA Treated -0.18 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
143 phyB mutant 16C 10hrs -0.50 >More info 0.03 >More info 16C 10h whole plant excluding roots Original data GEO bulk
144 siliques AtHb1 control -0.18 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk