4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 Mock Shade
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List of experiments correlated with "Col-0 Mock Shade"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 Mock Shade		 Correlation to
Col-0 Mock Shade		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 Mock Shade 1.00 >More info 1.00 >More info Col-0 Mock WL seedlings Original data
2 Col-0 DEX Shade 0.71 >More info 0.76 >More info Col-0 DEX WL seedlings Original data
3 shl-2 Pool 0.49 >More info 0.84 >More info Ler Pool seedling Original data GEO bulk
4 Col-0 shade 0.50 >More info 0.82 >More info Col-0 light seedlings Original data GEO bulk
5 6h volatiles Sm. R3089 0.41 >More info 0.75 >More info 6h untreated whole seedling Original data GEO bulk
6 24h volatiles Sm. R3089 0.42 >More info 0.74 >More info 24h untreated whole seedling Original data GEO bulk
7 mkk2 control rep 0.38 >More info 0.76 >More info Col-0 Time 0 rep Original data GEO bulk
8 petiole in FRD 0.40 >More info 0.71 >More info petiole in WL petioles Original data GEO bulk
9 WOX1-1 0.36 >More info 0.72 >More info Col-0 aerial part Original data
10 TaFLS overexpression line (OE2) 0.46 >More info 0.62 >More info Col-0 Rosette leaves Original data
11 WT hypoxia 0.39 >More info 0.68 >More info WT normoxia whole rosette Original data
12 MYB12OX/tt4 0.29 >More info 0.77 >More info Col-0 aerial part Original data
13 mil4 0.32 >More info 0.73 >More info Col rosettes Original data GEO bulk
14 Dark 6h hml 0.58 >More info 0.46 >More info 0h hml Original data
15 Light 0.5h steady-state -0.39 >More info -0.65 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
16 Day Time Treatment -0.38 >More info -0.66 >More info Day Time Control 1hr white light pulse aerial rosette Original data
17 leaf blade in FRD 0.41 >More info 0.62 >More info leaf blade in WL leaf blades Original data GEO bulk
18 mutant acs9B (single mutant) 0.44 >More info 0.57 >More info col control (single mutant) Original data GEO bulk
19 sid2 0.29 >More info 0.72 >More info Col rosettes Original data GEO bulk
20 Night Time Treatment -0.40 >More info -0.61 >More info Night Time Control 1hr white light pulse aerial rosette Original data
21 Dark 6h wt 0.54 >More info 0.46 >More info 0h wt Original data
22 60m light -0.31 >More info -0.69 >More info before light whole seedlings Original data GEO bulk
23 Pseudomonas 0.29 >More info 0.71 >More info Control pseudomonas treated whole seedling Original data GEO bulk
24 MIL4 ox 0.40 >More info 0.60 >More info Col Original data GEO bulk
25 Light 0.5h polysome-bound -0.32 >More info -0.67 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
26 pap1-D 0.32 >More info 0.67 >More info Col-0 aerial part Original data
27 12h volatiles Sm. R3089 0.28 >More info 0.70 >More info 12h untreated whole seedling Original data GEO bulk
28 camta1 leaf water 0.37 >More info 0.61 >More info Col-0 leaf water leaf Original data GEO bulk
29 pap1-D/tt4 0.27 >More info 0.71 >More info Col-0 aerial part Original data
30 Dark 6h ivd 0.46 >More info 0.51 >More info 0h ivd Original data
31 WT NAA 2h 0.22 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
32 Shoot dark control 7h 0.35 >More info 0.61 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
33 low R/FR mock spray 0.32 >More info 0.64 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
34 camta1-2 0.36 >More info 0.60 >More info Col-0-WT Original data GEO bulk
35 M6PR transgenic leaf 0mM NaCl 0.30 >More info 0.65 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
36 low R/FR JA spray 0.29 >More info 0.66 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
37 2d dark-grown WT(Col-0)/1 hr red light -0.38 >More info -0.56 >More info 2d dark-grown WT seedling Original data GEO bulk
38 tt4 0.22 >More info 0.72 >More info Col-0 aerial part Original data
39 WT Red light 1h -0.34 >More info -0.59 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
40 mil4 sid2 0.29 >More info 0.64 >More info Col rosettes Original data GEO bulk
41 Dark 44min pls RedLigh 1min -0.33 >More info -0.59 >More info Dark 45 min Original data Light treatments
42 WT NAA 1h 0.22 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
43 Dark 1day ivd 0.50 >More info 0.41 >More info 0h ivd Original data
44 ebs Pool 0.41 >More info 0.50 >More info Ler Pool seedling Original data GEO bulk
45 Shoot dark control 24h 0.36 >More info 0.54 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
46 WT drought -0.21 >More info -0.69 >More info WT control All aerial tissue Original data GEO bulk
47 Blue Light 4 h -0.26 >More info -0.63 >More info White Light 4 h Original data Light treatments
48 30m light -0.30 >More info -0.59 >More info before light whole seedlings Original data GEO bulk
49 fls1-3 0.34 >More info 0.54 >More info Col-0 Rosette leaves Original data
50 seedling 24h after Gamma atm-1 -0.34 >More info -0.54 >More info seedling day 2 unirradiated atm-1 24h Original data
51 GR-bdl DEX IAA -0.23 >More info -0.65 >More info GR-bdl IAA Original data GEO bulk
52 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
53 aerial organ callus inducing medium 12 h 0.31 >More info 0.56 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
54 Dark 40 min pls UV-A 5 min -0.31 >More info -0.55 >More info Dark 45 min Original data Light treatments
55 tumour 0.32 >More info 0.54 >More info non-tumor tumour Original data GEO bulk
56 Shoot submergence 24h 0.28 >More info 0.56 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
57 Col-0 low R/FR 0.34 >More info 0.50 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
58 Mock pft1 leaf -0.33 >More info -0.50 >More info Mock Col-0 leaf water leaf Original data GEO bulk
59 Light 4h polysome-bound -0.32 >More info -0.51 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
60 FarRed Light 45min 0.22 >More info 0.61 >More info White Light 45min Original data Light treatments
61 Mutant sav3-2 (SH) -0.20 >More info -0.61 >More info Col-0 (SH) Original data GEO bulk
62 Col(gl) leaf 0mM NaCl 0.26 >More info 0.55 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
63 Col(gl) 0mM NaCl 0.26 >More info 0.55 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
64 sav3-2 shade -0.20 >More info -0.61 >More info Col-0 shade seedlings Original data GEO bulk
65 IAA Treated 0.23 >More info 0.58 >More info Negative Control Original data GEO bulk
66 petiole in D 0.21 >More info 0.59 >More info petiole in WL petioles Original data GEO bulk
67 FarRed Light 4 h -0.25 >More info -0.54 >More info White Light 4 h Original data Light treatments
68 Atss3 Light1 -0.26 >More info -0.53 >More info Atss3 Dark0.5 Original data GEO bulk
69 bri1-116 0.06 >More info 0.73 >More info Col seedling Original data GEO bulk
70 Heat shock optimum 0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
71 Te 1d 0.21 >More info 0.56 >More info Te CA Leaves Original data
72 Rsch 3d 0.21 >More info 0.56 >More info Rsch CA Leaves Original data
73 IAA 1 h 0.16 >More info 0.60 >More info Mock 1 h Original data Basic hormone treatment of seedlings
74 Atss3 Light4 -0.22 >More info -0.54 >More info Atss3 Dark0.5 Original data GEO bulk
75 rosette leaves lcr 0.23 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
76 IAA 3 h 0.22 >More info 0.53 >More info Mock 3 h Original data Basic hormone treatment of seedlings
77 Red Light 45min 0.14 >More info 0.61 >More info White Light 45min Original data Light treatments
78 Laer pretreat GA Flg22 1h 0.04 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
79 Dry pre-dawn -0.21 >More info -0.54 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
80 1 h Light Total RNA -0.14 >More info -0.61 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
81 t-zeatin 0.5 h 0.20 >More info 0.51 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
82 CCA1-ox 6am non-polysomal 0.20 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
83 aphid saliva treated 0.18 >More info 0.52 >More info control aphid saliva treated leaves Original data GEO bulk
84 Myzus persicae saliva 0.18 >More info 0.52 >More info Control Original data GEO bulk
85 B.cinerea 18 h infection -0.18 >More info -0.51 >More info Mock 18 h Original data Botrytis cinerea infection
86 Botrytis cinerea 18h -0.18 >More info -0.51 >More info control 18h Original data GEO bulk
87 rosette leaves bdg 0.17 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
88 WT 3H Cold -0.14 >More info -0.52 >More info WT control Original data GEO bulk
89 leaf blade in D 0.13 >More info 0.52 >More info leaf blade in WL leaf blades Original data GEO bulk
90 siliques AtHb1 control 0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
91 bak1-3 +Pep2 2h -0.13 >More info -0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
92 myb61 xylem -0.11 >More info -0.52 >More info wt xylem xylem Original data GEO bulk
93 npr1 0.04 >More info 0.58 >More info WT(COL) Original data GEO bulk
94 sim smr1 0.06 >More info 0.54 >More info WT seedling Original data GEO bulk
95 Col-0 +lincomycin 0.08 >More info 0.52 >More info Col-0 -lincomycin Original data GEO bulk
96 ara1/2mut 0.05 >More info 0.52 >More info Col-3 Original data GEO bulk
97 Light 3day hml -0.05 >More info 0.62 >More info 0h hml Original data
98 seed germinating in countinuous light 24h SL -0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
99 Leafminer damaged seedlings -0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
100 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
101 NahG -0.02 >More info 0.52 >More info Col-0 Leaves Original data GEO bulk
102 line J2731-5 days control + 2 days salt s -0.13 >More info 0.61 >More info line J2731-7 days-control Original data
103 shoot hypoxia p35S 0.06 >More info -0.52 >More info shoot hypoxia total Original data GEO bulk
104 IAA7mII over-expressor IAA Treated -0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
105 Col0-PsmES4326-24hpi -0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
106 QC -0.07 >More info 0.50 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
107 embryo proper heart stage -0.11 >More info 0.51 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
108 cdpk6-yfp -0.19 >More info 0.51 >More info Kan seedlings Original data GEO bulk