4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Protoplast Induced
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List of experiments correlated with "Protoplast Induced"  Help Download transcriptome of top 30
Score Experiment Correlation from
Protoplast Induced		 Correlation to
Protoplast Induced		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Protoplast Induced 1.00 >More info 1.00 >More info Uninduced Original data GEO bulk
2 Leaf wounded 0.80 >More info 0.77 >More info Leaf control vegetative leaf Original data GEO bulk
3 WT 3H Cold 0.69 >More info 0.74 >More info WT control Original data GEO bulk
4 FLIGHT TAGESB plate6 ROOTS 0.74 >More info 0.67 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
5 WT-Dry 0.71 >More info 0.69 >More info WT-CK dehydration treatment 1h Original data
6 root protoplasts 40 mM NaCl 0.72 >More info 0.65 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
7 Selenate (root) 0.78 >More info 0.59 >More info Ws (root) Original data GEO bulk
8 Root Selenate 0.78 >More info 0.59 >More info Root control 40 micromolar selenate Root Original data GEO bulk
9 TNT-seedlings 0.61 >More info 0.74 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
10 abi1 hypocotyl 0.69 >More info 0.65 >More info Ler hypocotyl hypocotyl Original data GEO bulk
11 aba1 hypocotyl 0.70 >More info 0.63 >More info Ler hypocotyl hypocotyl Original data GEO bulk
12 4C 2h(SOIL) 0.62 >More info 0.69 >More info 4C 0h(SOIL) Original data GEO bulk
13 root cells stele -Fe 0.75 >More info 0.56 >More info whole roots standard Original data GEO bulk
14 rosette Dark Wounded 0.74 >More info 0.55 >More info rosette Dark Control Original data GEO bulk
15 Rose Bengal 0.5 uM 0.65 >More info 0.63 >More info Control RB and PER Rose Bengal Original data
16 flu 0.74 >More info 0.54 >More info WT Col Original data GEO bulk
17 rosette Light Wounded 0.73 >More info 0.53 >More info rosette Light Control Original data GEO bulk
18 mkk2 control rep -0.60 >More info -0.66 >More info Col-0 Time 0 rep Original data GEO bulk
19 WT drought 0.67 >More info 0.57 >More info WT control All aerial tissue Original data GEO bulk
20 flu over-tAPX 0.73 >More info 0.51 >More info WT Col Original data GEO bulk
21 root cells endodermis and quiescent center -Fe 0.69 >More info 0.54 >More info whole roots standard Original data GEO bulk
22 ex2 flu dark 8hours/30 minute light 0.66 >More info 0.57 >More info col dark 8hours/30 minute light Original data GEO bulk
23 whole roots 140 mM NaCl 30 minutes 0.62 >More info 0.60 >More info whole roots standard Original data GEO bulk
24 9 hr Hypoxia 1 hr recovery Total RNA 0.72 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
25 NJ15 0.64 >More info 0.57 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
26 OsSAP11 expressing -0.67 >More info -0.54 >More info WT seedlings Original data GEO bulk
27 Col0-PsmES4326-24hpi 0.60 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
28 npr1 sni1 brca2a SA -0.72 >More info -0.49 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
29 IAA/inhibitor A Treated 0.73 >More info 0.47 >More info IAA Treated Original data GEO bulk
30 flu dark 8hours/30 minute light 0.60 >More info 0.60 >More info col dark 8hours/30 minute light Original data GEO bulk
31 root cells -Fe 0.72 >More info 0.48 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
32 WT seedlings MV 0.72 >More info 0.47 >More info WT seedlings control Seedlings Original data GEO bulk
33 9 hr Hypoxia 1 hr recovery IP RNA 0.72 >More info 0.46 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
34 SA 4mM 0.70 >More info 0.48 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
35 WT AntimycinA 3h 0.72 >More info 0.45 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
36 Leafminer damaged seedlings 0.60 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
37 35S:RPS4 eds1-2 2h -0.65 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
38 mkk1 control rep -0.65 >More info -0.51 >More info Col-0 Time 0 rep Original data GEO bulk
39 inhibitor A Treated 0.70 >More info 0.46 >More info Negative Control Original data GEO bulk
40 Col-0 37C 0.71 >More info 0.44 >More info Col-0 22C Original data GEO bulk
41 WT 6H Cold 0.63 >More info 0.52 >More info WT control Original data GEO bulk
42 whole roots 140 mM NaCl 1 hour 0.64 >More info 0.50 >More info whole roots standard Original data GEO bulk
43 tfl1-1-23ºC 0.66 >More info 0.47 >More info WT-23ºC Original data GEO bulk
44 Cycloheximide 3 h 0.69 >More info 0.44 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
45 seedling 6h after HZE WT 0.74 >More info 0.38 >More info seedling day 1 unirradiated WT 6h Original data
46 myb61 xylem 0.56 >More info 0.56 >More info wt xylem xylem Original data GEO bulk
47 max4 hypocotyl 0.66 >More info 0.46 >More info wt hypocotyl hypocotyl Original data GEO bulk
48 WT H2O2 3h 0.64 >More info 0.48 >More info WT water 3h 3h_H2O2 Original data GEO bulk
49 root cells columella root cap -Fe 0.73 >More info 0.39 >More info whole roots standard Original data GEO bulk
50 WT 30μM arsenate 8 hours. 0.68 >More info 0.44 >More info WT control (not supplemented). Original data
51 Wounding Stress3 h (shoot) 0.63 >More info 0.49 >More info Stress mock 3 h (shoot) Original data Stress treatments
52 FLIGHT TAGES 2B plate6 HYPOCOTYLS 0.68 >More info 0.44 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
53 opr3 OPDA 0.5 h 0.47 >More info 0.65 >More info opr3 0 h Original data GEO bulk
54 4C 1h 0.49 >More info 0.63 >More info 4C 0h Original data GEO bulk
55 seedling 12h after HZE WT 0.70 >More info 0.42 >More info seedling day 1 unirradiated WT 12h Original data
56 Light 0.65 >More info 0.46 >More info Control Original data GEO bulk
57 Heat shock optimum 0.46 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
58 npr1 sni1 SA 0.64 >More info 0.47 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
59 upf3 0.66 >More info 0.44 >More info WT whole plant Original data GEO bulk
60 bHLH122 ox -0.63 >More info -0.46 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
61 rdr6-15 -0.78 >More info -0.31 >More info Col-0 Original data GEO bulk
62 protoplasted roots pH4.6 0.63 >More info 0.45 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
63 ask1 mutant flower buds 0.59 >More info 0.49 >More info Ler WT flower buds unopened flower buds Original data GEO bulk
64 toc1-1-57hr 0.62 >More info 0.46 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
65 ein5-1 ski2-3 0.67 >More info 0.40 >More info Col-0 aerial tissue Original data
66 Leaf systemic 0.65 >More info 0.42 >More info Leaf control vegetative leaf Original data GEO bulk
67 npr1 sni1 ssn2 SA -0.73 >More info -0.33 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
68 A. thaliana-A. lyrata hybrid -0.71 >More info -0.35 >More info A. thaliana mature leaves before flowering Original data GEO bulk
69 TA induced 0.57 >More info 0.49 >More info Methanol TA Suspension cells Original data GEO bulk
70 35S::MBF1c 0.62 >More info 0.43 >More info control Original data GEO bulk
71 Kas -Fe 24h Roots -0.50 >More info -0.55 >More info Kas +Fe 24h Roots Original data GEO bulk
72 OsRLCK253 expressing -0.60 >More info -0.45 >More info WT seedlings Original data GEO bulk
73 bak1-3 +Pep2 2h 0.51 >More info 0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
74 Kas-1 -Fe 24h -0.50 >More info -0.55 >More info Kas-1 +Fe 24h roots Original data GEO bulk
75 mutant acs4A (single mutant) -0.62 >More info -0.43 >More info col control (single mutant) Original data GEO bulk
76 Lipopolysaccaride4 h (leaf) 0.69 >More info 0.36 >More info Mock 4 h (leaf) Original data Elicitor treatments
77 chito-tetramer 0.63 >More info 0.41 >More info Col Mock Original data GEO bulk
78 axr1 hypocotyl 0.61 >More info 0.43 >More info wt hypocotyl hypocotyl Original data GEO bulk
79 WT+H2O2 0.60 >More info 0.44 >More info WT H2O2 Original data GEO bulk
80 sid2-avrB-6h 0.59 >More info 0.45 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
81 root stele 40 mM NaCls 0.64 >More info 0.40 >More info root stele Original data GEO bulk
82 IAA/inhibitor B Treated 0.56 >More info 0.48 >More info IAA Treated Original data GEO bulk
83 GA 0.68 >More info 0.36 >More info none GA Rosette Original data GEO bulk
84 Anoxia 0.60 >More info 0.44 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
85 HARAP aerobic -0.50 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
86 Bur-0-3h IAA 0.64 >More info 0.39 >More info Bur-0h IAA whole plant Original data GEO bulk
87 vtc2 mature somatic embryo 0.62 >More info 0.41 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
88 1h +Pi -0.58 >More info -0.45 >More info 1h -Pi root Original data GEO bulk
89 CDB1-Knockout -0.46 >More info -0.57 >More info WT Original data GEO bulk
90 triploid female excess -0.40 >More info -0.63 >More info tetraploid Original data GEO bulk
91 anac017-2 AntimycinA 3h -0.69 >More info -0.33 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
92 root epidermis and lateral root cap 40 mM NaCl 0.64 >More info 0.38 >More info root epidermis and lateral root cap Original data GEO bulk
93 miR393 0h -0.44 >More info -0.58 >More info WT 0h Leaf tissue Original data GEO bulk
94 inhibitor B Treated 0.59 >More info 0.42 >More info Negative Control Original data GEO bulk
95 oas-a1.1 Cd 24h 0.55 >More info 0.45 >More info Cd 24h root Shoot Original data GEO bulk
96 shoot-10 μM DEX- 24hr 0.51 >More info 0.49 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
97 low CO2 + light 0.62 >More info 0.38 >More info normal CO2 + light Original data GEO bulk
98 Nicotinamide-65hr 0.66 >More info 0.34 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
99 myb61 cork 0.50 >More info 0.50 >More info wt cork cork Original data GEO bulk
100 Pst-DC3000(avrRpm1)-4hpi 0.55 >More info 0.44 >More info Pst-DC3000-4hpi Original data GEO bulk
101 Heat and anoxia 0.61 >More info 0.38 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
102 lug3 flowers 0.57 >More info 0.42 >More info WT-flowers flowers Original data GEO bulk
103 1 h Light Total RNA -0.67 >More info -0.32 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
104 root callus inducing medium 96 h -0.70 >More info -0.29 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
105 wnk8-1 untreated -0.50 >More info -0.49 >More info Col-0 untreated seedlings Original data GEO bulk
106 plant (tga2-5-6) 4h phytoprostane A1 0.46 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
107 Col-0 2HS 0.68 >More info 0.30 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
108 toc1-1-65hr 0.70 >More info 0.28 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
109 mkk1 24h BTH rep -0.52 >More info -0.46 >More info Col-0 24h BTH rep Original data GEO bulk
110 ckh1 CK200 0.63 >More info 0.35 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
111 root callus inducing medium 24h -0.70 >More info -0.28 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
112 2hr transitory KNO3 SR cell 0.66 >More info 0.32 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
113 siliques AtHb1 control 0.46 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
114 coi1-2 0.63 >More info 0.34 >More info Col-0 mock Whole seedling Original data GEO bulk
115 chito-octamer 0.58 >More info 0.39 >More info Col Mock Original data GEO bulk
116 AtLysM RLK1 mutant chitooctaose -0.61 >More info -0.36 >More info WT chitooctaose Original data GEO bulk
117 root callus inducing medium 48 h -0.69 >More info -0.28 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
118 Col-Luc WT 3h antimycin A 0.69 >More info 0.28 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
119 cat2-2; 8h switch to ambient CO2 concentrations; 0.33 >More info 0.64 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
120 Kas-1 -Fe 48h -0.62 >More info -0.34 >More info Kas-1 +Fe 24h roots Original data GEO bulk
121 Kas -Fe 48h Roots -0.62 >More info -0.34 >More info Kas +Fe 24h Roots Original data GEO bulk
122 seedling 24h after HZE atm-1 0.61 >More info 0.35 >More info seedling day 2 unirradiated atm-1 24h Original data
123 BLM+INA 0.60 >More info 0.36 >More info CK BLM and INA seedling Original data
124 WT flg22 2h 0.62 >More info 0.34 >More info WT 0h Leaf tissue Original data GEO bulk
125 Salt Stress 24 h (root) 0.73 >More info 0.23 >More info Stress mock 24 h (root) Original data Stress treatments
126 Bur-0-30min IAA 0.58 >More info 0.38 >More info Bur-0h IAA whole plant Original data GEO bulk
127 tbf1-mock infiltration -0.62 >More info -0.34 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
128 pXVE:HA-EDM2-a untreated -0.39 >More info -0.57 >More info Col-0 untreated seedlings Original data GEO bulk
129 CMP 4hr 0.67 >More info 0.28 >More info Acetone 4hr root Original data GEO bulk
130 Differentiation 24h -0.68 >More info -0.27 >More info Differentiation 0h leaves Original data
131 9 hr Hypoxia Total RNA 0.62 >More info 0.33 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
132 GiantCell Root -0.59 >More info -0.36 >More info Control Root laser captured giant cells Original data GEO bulk
133 root cells cortex -Fe 0.68 >More info 0.26 >More info whole roots standard Original data GEO bulk
134 IMI 4mM 0.68 >More info 0.26 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
135 Col-0 under 4 days salt 0.71 >More info 0.23 >More info Col-0 under control 4 days salt treatment rosette Original data
136 9 hr Hypoxia IP RNA 0.63 >More info 0.31 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
137 cov1 cov2 stem Base 0.70 >More info 0.24 >More info WT stem Base stem Base Original data GEO bulk
138 roottip hypoxia total 0.64 >More info 0.30 >More info roottip control total Original data GEO bulk
139 WT+chitooctaose 0.57 >More info 0.37 >More info WT+water chitooctaose seedlings Original data GEO bulk
140 ex1 flu dark 8hours/30 minute light 0.43 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
141 miR 0h 0.53 >More info 0.40 >More info Col 0h Leaf Original data GEO bulk
142 ataf1-1 mutant Col-0 Bgh inoculated 0.67 >More info 0.26 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
143 Nicotinamide-57hr 0.65 >More info 0.28 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
144 Kas2 roots 2hr KNO3 nitrogen 0.60 >More info 0.33 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
145 8hr-pH4.5 0.60 >More info 0.33 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
146 2hr continuous KNO3 SR cell 0.59 >More info 0.34 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
147 WT chitooctaose 0.58 >More info 0.35 >More info WT water Original data GEO bulk
148 Col-0 DCA 48h 0.52 >More info 0.41 >More info Col-0 MOCK 48h Original data GEO bulk
149 rli 0.64 >More info 0.29 >More info WT whole plant Original data GEO bulk
150 DC3000 24h 0.58 >More info 0.35 >More info Mock 24h DC3000 Original data GEO bulk
151 Laer pretreat GA Flg22 1h 0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
152 2 hr Hypoxia Total RNA 0.66 >More info 0.26 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
153 3x(p) 0.54 >More info 0.38 >More info 2x two week old seedlings Original data
154 Seedling-HeatStressed POLYSOMESmRNA 0.54 >More info 0.38 >More info Seedling-control POLYSOMESmRNA seedling Original data
155 oligomycin 1 h 0.55 >More info 0.37 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
156 root cells epidermis and lateral root cap -Fe 0.64 >More info 0.28 >More info whole roots standard Original data GEO bulk
157 Leafminer locally damaged thaliana seedlings 0.60 >More info 0.32 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
158 atmospheric CO2 high Mg shoot 0.63 >More info 0.29 >More info atmospheric CO2 normal Mg shoot Shoot Original data
159 gai Control 0.63 >More info 0.29 >More info Laer Control leaf discs Original data GEO bulk
160 AgNO3 3 h 0.58 >More info 0.34 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
161 TaFLS overexpression line (OE2) -0.64 >More info -0.27 >More info Col-0 Rosette leaves Original data
162 WT 3h -P 0.51 >More info 0.40 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
163 elevated CO2 high Mg shoot -0.56 >More info -0.35 >More info atmospheric CO2 high Mg shoot Shoot Original data
164 Seedling-HeatStressed TOTALmRNA 0.52 >More info 0.39 >More info Seedling-control TOTALmRNA seedling Original data
165 root callus inducing medium 12 h -0.60 >More info -0.31 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
166 Col leaf 100mM NaCl 0.57 >More info 0.34 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
167 Col leaf 100mM NaCl 0.57 >More info 0.34 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
168 Col 100mM NaCl 0.57 >More info 0.34 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
169 downy mildew cotyledons late stage 0.70 >More info 0.21 >More info mock inoculated Cotyledons Original data GEO bulk
170 Bur-0-1h IAA 0.59 >More info 0.32 >More info Bur-0h IAA whole plant Original data GEO bulk
171 atr mock 0.59 >More info 0.32 >More info WT mock shoot apical meristem Original data
172 rsa3-1 Na 24h 0.52 >More info 0.38 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
173 IXB induced 0.51 >More info 0.39 >More info Methanol IXB Suspension cells Original data GEO bulk
174 P.p 2.5hai 0.65 >More info 0.25 >More info At-Control roots Original data GEO bulk
175 FLIGHT TAGESB plate6 SHOOTS 0.68 >More info 0.22 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
176 mutant acs2C (single mutant) -0.57 >More info -0.33 >More info col control (single mutant) Original data GEO bulk
177 dicamba 0.55 >More info 0.34 >More info WT mock whole seedling Original data GEO bulk
178 Differentiation 36h -0.68 >More info -0.20 >More info Differentiation 0h leaves Original data
179 tetraploid 0.33 >More info 0.55 >More info diploid Original data GEO bulk
180 irradiated leaf (cmt 5d) 0.65 >More info 0.23 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
181 wnk8-3 untreated -0.51 >More info -0.37 >More info Col-0 untreated seedlings Original data GEO bulk
182 root Dosed gold 0.63 >More info 0.25 >More info root No gold .125 mM gold 24 h roots Original data
183 WT-NOCO2 INFECTED 0.62 >More info 0.26 >More info WT-MOCK Original data GEO bulk
184 Te ozone 0.64 >More info 0.24 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
185 0.125 mM gold 24 h 0.63 >More info 0.25 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
186 6h +Pi -0.50 >More info -0.38 >More info 6h -Pi root Original data GEO bulk
187 upf1 0.58 >More info 0.30 >More info WT whole plant Original data GEO bulk
188 sfr6 drought -0.59 >More info -0.29 >More info WT drought All aerial tissue Original data GEO bulk
189 Leafminer systemically damaged thaliana seedlings 0.57 >More info 0.31 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
190 anac017-2 H2O2 3h -0.58 >More info -0.30 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
191 Mutant axr3-1 (IAA) 0.56 >More info 0.31 >More info Col (IAA) Original data GEO bulk
192 CMV-A2b mutant 0.67 >More info 0.20 >More info Mock-At Aerial tissues Original data GEO bulk
193 pmr5 0.54 >More info 0.33 >More info Col-0 Original data GEO bulk
194 oligomycin 4 h 0.65 >More info 0.22 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
195 irradiated leaf (WT 5d) 0.61 >More info 0.26 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
196 A. lyrata -0.61 >More info -0.26 >More info A. thaliana mature leaves before flowering Original data GEO bulk
197 wnk8-2 untreated -0.50 >More info -0.37 >More info Col-0 untreated seedlings Original data GEO bulk
198 pmr5 pmr6 0.57 >More info 0.30 >More info Col-0 Original data GEO bulk
199 ein3 eil1 0.57 >More info 0.30 >More info Col-0 mock Whole seedling Original data GEO bulk
200 2hr continuous KNO3 ECR cell 0.57 >More info 0.30 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
201 35S:RPS4 eds1-2 24h -0.54 >More info -0.32 >More info 35S:RPS4 24h leaves Original data
202 Col-0-3h IAA 0.67 >More info 0.19 >More info Col-0-0h IAA whole plant Original data GEO bulk
203 IRP1-OE-Ctrl--root 0.55 >More info 0.31 >More info COL-0-Ctrl--root root Original data
204 HSP90 Reduced RNAi-A2 0.53 >More info 0.33 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
205 ckh1 CK25 0.54 >More info 0.32 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
206 stn7-1 -0.73 >More info -0.13 >More info Col-0 rosette leaves Original data GEO bulk
207 bak1-3 +Pep2 10h 0.60 >More info 0.26 >More info WT +Pep2 10h Pep2 Original data GEO bulk
208 hira-root -0.58 >More info -0.28 >More info WT-root root Original data
209 WT no Pi 0.59 >More info 0.27 >More info WT complete seedlings Original data
210 coi1-16 ein2 sid2 ctrl -0.61 >More info -0.25 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
211 Col-0 Root 100 mM ATP 30 min 0.51 >More info 0.34 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
212 Col-0 low oxygen 0.55 >More info 0.30 >More info Col-0 control low oxygen root Original data GEO bulk
213 46T-Dry 0.52 >More info 0.33 >More info WT-Dry dehydration treatment 1h Original data
214 psad1-1 stn7-1 -0.68 >More info -0.17 >More info Col-0 rosette leaves Original data GEO bulk
215 Col-0 C2H4 24h 0.56 >More info 0.29 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
216 Infected pft1 leaf 0.50 >More info 0.34 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
217 til1-1 22C 0.51 >More info 0.33 >More info Col-0 22C Original data GEO bulk
218 Shoot -K 0.51 >More info 0.33 >More info Control-shoot Original data GEO bulk
219 FLIGHT TAGESB plate 0.67 >More info 0.17 >More info GROUND CONTROL TAGESB plate Original data
220 K starvation (shoot) 0.51 >More info 0.33 >More info Ws (shoot) Original data GEO bulk
221 sng1 0.32 >More info 0.52 >More info WT aerial region Original data GEO bulk
222 Roots Cd -0.69 >More info -0.15 >More info Roots control Cd Root Original data GEO bulk
223 Col-0 ozone 0.60 >More info 0.24 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
224 LTN008-2 aza-dc 0.72 >More info 0.12 >More info LTN012-2 Mock Original data
225 Laer pretreat GA+JA Flg22 0h 0.54 >More info 0.29 >More info Laer pretreat water control leaf discs Original data GEO bulk
226 RRE1 Chitin 0.67 >More info 0.16 >More info Chitin Original data GEO bulk
227 Ws 100mM NaCl 0.53 >More info 0.30 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
228 Ws leaf 100mM NaCl 0.53 >More info 0.30 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
229 shoot-10 μM DEX- 12 hr 0.50 >More info 0.33 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
230 HopZ1a treated ulp1c ulp1d 0.56 >More info 0.27 >More info col Original data GEO bulk
231 MYB51 OE -0.64 >More info -0.19 >More info WT for ATR1/MYB51 Original data GEO bulk
232 2hr transitory KNO3 PrR cell 0.66 >More info 0.17 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
233 WT 24H Cold 0.51 >More info 0.32 >More info WT control Original data GEO bulk
234 Col in Pi deficiency medium 0.32 >More info 0.51 >More info Col in control medium root Original data GEO bulk
235 vte2-1 3d vernalization 0.59 >More info 0.24 >More info WT 3d vernalization Original data GEO bulk
236 root hypoxia total 0.62 >More info 0.21 >More info root control total Original data GEO bulk
237 Col light-dark EtOH 0.57 >More info 0.26 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
238 P.p 6hai 0.64 >More info 0.18 >More info At-Control roots Original data GEO bulk
239 pepr1-1 Pepr2-3 +Pep2 2h -0.56 >More info -0.26 >More info WT +Pep2 2h Pep2 Original data GEO bulk
240 21h-DC3000 hrpA -0.52 >More info -0.30 >More info 21h-DC3000 leaves Original data GEO bulk
241 Differentiation 48h -0.66 >More info -0.16 >More info Differentiation 0h leaves Original data
242 seedling 24h after HZE WT 0.73 >More info 0.09 >More info seedling day 2 unirradiated WT 24h Original data
243 WT 2-4h Xanthomonas 0.60 >More info 0.22 >More info WT T0 Original data GEO bulk
244 Nicotinamide-61hr 0.59 >More info 0.23 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
245 grf1/grf2/grf3 0.59 >More info 0.23 >More info WS Original data GEO bulk
246 gapcp1gapcp2 ABA -0.22 >More info -0.60 >More info WT ABA ABA seedling Original data GEO bulk
247 WT Seedling BL+ABA 0.53 >More info 0.28 >More info WT Seedling BL Original data GEO bulk
248 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.64 >More info 0.17 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
249 ref6-1 0.51 >More info 0.30 >More info Col whole seedling Original data GEO bulk
250 coi1-16 ein2 sid2 ozone 0.59 >More info 0.22 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
251 P.syringae vir 4 h (leaf) 0.57 >More info 0.24 >More info Mock 4 h (leaf) Original data Elicitor treatments
252 CMP 24hr 0.58 >More info 0.23 >More info Acetone 24hr root Original data GEO bulk
253 Osmotic Stress 24 h (shoot) 0.54 >More info 0.26 >More info Stress mock 24 h (shoot) Original data Stress treatments
254 ORS1 induced 0.51 >More info 0.29 >More info mock-induced rosette leaves Original data GEO bulk
255 toc1-1-77hr 0.62 >More info 0.18 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
256 hai1-2 low water potential 0.51 >More info 0.29 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
257 seedlings protease IV 0.55 >More info 0.25 >More info seedlings nontreated control whole seedling Original data
258 smg7b-1 0.62 >More info 0.18 >More info WT whole plant Original data GEO bulk
259 AsAKiin11 T3 -0.62 >More info -0.18 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
260 WT-SA 0.52 >More info 0.28 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
261 Atss3 Dark4 -0.53 >More info -0.27 >More info Atss3 Dark0.5 Original data GEO bulk
262 WT Col-0 Bgh inoculated 0.61 >More info 0.19 >More info WT Col-0 Un-inoculated Original data GEO bulk
263 HopZ1a treated 0.56 >More info 0.24 >More info col Original data GEO bulk
264 gai MeJA 1h -0.57 >More info -0.23 >More info Laer MeJA 1h leaf discs Original data GEO bulk
265 rcf1-1 cold 24h 0.57 >More info 0.23 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
266 atr zebularine 0.57 >More info 0.23 >More info WT zebularine shoot apical meristem Original data
267 GST NPP1 4 h (leaf) 0.60 >More info 0.19 >More info Mock 4 h (leaf) Original data Elicitor treatments
268 1.5 hr ammonium 0.53 >More info 0.26 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
269 Mutant siz1-3 (Drought) 0.57 >More info 0.22 >More info Col-0 (Drought) Original data GEO bulk
270 siz1-3 drought 0.57 >More info 0.22 >More info Col-0 drought Original data GEO bulk
271 1 h Light IP RNA -0.54 >More info -0.24 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
272 mbd11 mutant thaliana 10-day-old seedling 0.56 >More info 0.22 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
273 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.60 >More info 0.18 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
274 Mutant coi1(leaf) -0.55 >More info -0.23 >More info Col-0 (leaf) Original data GEO bulk
275 frb1 mutant 0.54 >More info 0.24 >More info WT whole seedling Original data GEO bulk
276 Elevated CO2 expanding leaf 0.53 >More info 0.25 >More info Ambient CO2 expanding leaf expanding leaf Original data
277 WT 90-105 min Xanthomonas 0.51 >More info 0.27 >More info WT T0 Original data GEO bulk
278 CeO2 germinant -0.50 >More info -0.28 >More info Millipore Water germinant CeO2 seedling Original data
279 Cor 10h 0.53 >More info 0.25 >More info Mock 10h Cor Original data GEO bulk
280 35S:RPS4 eds1-2 8h -0.54 >More info -0.24 >More info 35S:RPS4 8h leaves Original data
281 col-5 DC3000 12h 0.55 >More info 0.23 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
282 rcf1-1 cold 0h 0.54 >More info 0.24 >More info WT cold 0h Control seedlings Original data GEO bulk
283 AvrRpt2 Col-0 6hpi 0.58 >More info 0.19 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
284 C24 ozone 0.58 >More info 0.19 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
285 sid2-1 cold -0.55 >More info -0.22 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
286 +1.6 mM Tween 20 1 h. 0.60 >More info 0.17 >More info +distilled water 1 h. Original data GEO bulk
287 safener treated 0.53 >More info 0.24 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
288 Col 8h 0.50 >More info 0.27 >More info Col CA Leaves Original data
289 opr3 JA 0.5 h 0.27 >More info 0.50 >More info opr3 0 h Original data GEO bulk
290 Phaseolicola 2 h (leaf) 0.51 >More info 0.25 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
291 2 hr Hypoxia IP RNA 0.58 >More info 0.18 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
292 CT101 ozone 0.56 >More info 0.20 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
293 root longitudinal zone-4 pH 4.6 0.50 >More info 0.26 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
294 anac017-1 H2O2 3h -0.55 >More info -0.20 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
295 ataf1-1 mutant Col-0 Un-inoculated -0.60 >More info -0.15 >More info WT Col-0 Un-inoculated Original data GEO bulk
296 A. halleri -0.50 >More info -0.25 >More info A. thaliana mature leaves before flowering Original data GEO bulk
297 GST 4 h (leaf) 0.64 >More info 0.11 >More info Mock 4 h (leaf) Original data Elicitor treatments
298 Col-0 HS 0.13 >More info 0.62 >More info Col-0 control heat shocked seedling Original data GEO bulk
299 WT (Col-0) heat shock 0.13 >More info 0.62 >More info WT (Col-0) whole seedling Original data GEO bulk
300 CLO 4mM 0.68 >More info 0.06 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
301 cys-c1 root -0.53 >More info -0.21 >More info Root-WT roots Original data GEO bulk
302 amiR-ETP1/2 0.53 >More info 0.21 >More info Col-0 air Original data GEO bulk
303 Ts5 roots 2hr KCl control 0.58 >More info 0.16 >More info Col0 roots 2hr KCl control root Original data GEO bulk
304 Osmotic Stress 24 h (root) 0.55 >More info 0.19 >More info Stress mock 24 h (root) Original data Stress treatments
305 ARR22-ox (t-zeatin 3 h) 0.55 >More info 0.19 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
306 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
307 npr1-1 SA -0.53 >More info -0.20 >More info Col-0 SA complete seedling Original data
308 cpr5scv1 0.50 >More info 0.23 >More info WT(COL) Original data GEO bulk
309 ein2-1 9 hpi A. brassicicola 0.62 >More info 0.11 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
310 Col upon hypoxia 6 hrs 0.57 >More info 0.16 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
311 Col-0-1h IAA 0.59 >More info 0.14 >More info Col-0-0h IAA whole plant Original data GEO bulk
312 SOS1 0mM NaCl 0.57 >More info 0.16 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
313 WT NAA/flg 1h 0.58 >More info 0.15 >More info WT 0h Leaf tissue Original data GEO bulk
314 col-5 hrpA 12h 0.52 >More info 0.21 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
315 hrpA 7h 0.54 >More info 0.19 >More info Mock 7h hrpA Original data GEO bulk
316 WT flg22 1h 0.55 >More info 0.17 >More info WT 0h Leaf tissue Original data GEO bulk
317 Fenclorim 4hr 0.55 >More info 0.17 >More info Acetone 4hr root Original data GEO bulk
318 2hr KCl control SR cell 0.54 >More info 0.18 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
319 penta MeJA 1h 0.70 >More info 0.02 >More info Laer MeJA 1h leaf discs Original data GEO bulk
320 Mature callus 0.53 >More info 0.19 >More info Young callus hypocotyls Original data GEO bulk
321 Botrytis cinerea 48h 0.54 >More info 0.18 >More info control 48h Original data GEO bulk
322 8-DAC chr11-1chr17-1 0.54 >More info 0.18 >More info 8-DAC Col-0 leaf explants Original data
323 Col-0-30min IAA 0.55 >More info 0.16 >More info Col-0-0h IAA whole plant Original data GEO bulk
324 WT resupplied Pi 4h 0.54 >More info 0.17 >More info WT complete seedlings Original data
325 Col-0-avrB-6h 0.54 >More info 0.17 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
326 QK HS 0.16 >More info 0.55 >More info QK control heat shocked seedling Original data GEO bulk
327 hst5 0.57 >More info 0.14 >More info Col-0 Original data GEO bulk
328 RRE2 Chitin 0.53 >More info 0.18 >More info Chitin Original data GEO bulk
329 BLM 0.51 >More info 0.20 >More info CK BLM seedling Original data
330 rosette leaves fdh 0.50 >More info 0.21 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
331 35S::Zat12+H2O2 0.51 >More info 0.20 >More info WT+H2O2 H2O2 Original data GEO bulk
332 Laer Flg22(Agrobacterium) 2h -0.50 >More info -0.21 >More info Laer Control leaf discs Original data GEO bulk
333 Flagellin 4 h (leaf) 0.60 >More info 0.11 >More info Mock 4 h (leaf) Original data Elicitor treatments
334 seedlings-week-old RECA1-overexpressing
transgenic		 0.50 >More info 0.21 >More info seedlings-week-old Col-0 seedlings Original data
335 P.p 30hai 0.61 >More info 0.10 >More info At-Control roots Original data GEO bulk
336 Col-0 low oxygen 0.53 >More info 0.17 >More info Col-0 Original data GEO bulk
337 AFB1 0h 0.57 >More info 0.13 >More info Col 0h Leaf Original data GEO bulk
338 Atss3 Dark8 -0.51 >More info -0.19 >More info Atss3 Dark0.5 Original data GEO bulk
339 gh3.5-1D 48 hpi 0.60 >More info 0.10 >More info Col-0 uninoculated Original data GEO bulk
340 tbf1-elf18 -0.50 >More info -0.20 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
341 Differentiation 12h -0.55 >More info -0.14 >More info Differentiation 0h leaves Original data
342 MPK6 ox Shoot Hypoxia 0.65 >More info 0.04 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
343 FHY3p dark+DEX -0.52 >More info -0.17 >More info FHY3p dark+mock Original data GEO bulk
344 Red/FR Light45min 0.01 >More info 0.68 >More info FarRed Light 45min Original data Light treatments
345 Col-0 wt Hypoxic 0.59 >More info 0.10 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
346 efr-1 +elf18 10h -0.50 >More info -0.19 >More info WT +elf18 10h elf18 Original data GEO bulk
347 gul2-1 bri1-5 mutant 0.57 >More info 0.12 >More info WT 7 day-old whole seedlings Original data
348 Cold Stress 24 h (root) 0.50 >More info 0.19 >More info Stress mock 24 h (root) Original data Stress treatments
349 Mutant iaa17-6 (IAA) 0.62 >More info 0.07 >More info Col (IAA) Original data GEO bulk
350 edr1 18 h powdery mildew 0.51 >More info 0.18 >More info Col-0 18 h powdery mildew Original data GEO bulk
351 P-chlorophenoxy- isobutyric acid 3 h 0.08 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
352 QC pSCR 3h BL 0.06 >More info 0.63 >More info QC pSCR 0h BL brassinosteroid root Original data
353 Dark 3day ivd 0.52 >More info 0.16 >More info 0h ivd Original data
354 abi4-102 (II) 0.55 >More info 0.13 >More info Col (II) rosette Original data GEO bulk
355 desiccated mature pollen grains -0.13 >More info -0.55 >More info hydrated pollen grains Original data GEO bulk
356 wrky33 Bc inoculation 14h 0.60 >More info 0.08 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
357 shoots bhlh100/101 0uM Fe 0.57 >More info 0.11 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
358 P.p 10.5hai 0.57 >More info 0.11 >More info At-Control roots Original data GEO bulk
359 rdr1-1 -0.61 >More info -0.07 >More info Col-0 Original data GEO bulk
360 2hr continuous KNO3 PrR cell 0.62 >More info 0.06 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
361 arr10 arr12 -0.59 >More info -0.09 >More info DMSO--WT DMSO roots Original data GEO bulk
362 aox1a(line) MLD stressed 0.50 >More info 0.17 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
363 SHR-GR Time 1H Dex 0.58 >More info 0.09 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
364 shoot hypoxia total 0.57 >More info 0.10 >More info shoot control total Original data GEO bulk
365 Col-0 SA 0.60 >More info 0.07 >More info Col-0 Original data GEO bulk
366 35S::CYC 0.54 >More info 0.12 >More info thaliana control secondary inflorescence Original data
367 Laer Flg22+GA 1h 0.55 >More info 0.11 >More info Laer Control leaf discs Original data GEO bulk
368 col-5 DC3000-avrRpm 4h 0.51 >More info 0.15 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
369 Cor hrpS 10h 0.56 >More info 0.10 >More info Mock 10h Cor hrpS Original data GEO bulk
370 mutant acs5D (single mutant) -0.50 >More info -0.16 >More info col control (single mutant) Original data GEO bulk
371 Col BTH -0.01 >More info 0.67 >More info Col rosettes Original data GEO bulk
372 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
373 Laer Alternaria 3dpi -0.50 >More info -0.15 >More info Laer Control leaf discs Original data GEO bulk
374 Col ozone 3h 0.50 >More info 0.15 >More info Col clean-air 3h ozone Original data GEO bulk
375 sid2-2 9 hpi A. brassicicola 0.59 >More info 0.06 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
376 CMV-WT 0.56 >More info 0.08 >More info Mock-At Aerial tissues Original data GEO bulk
377 Shoot apex transition (before bolting) -0.51 >More info -0.13 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
378 Col-0 9 hpi A. brassicicola 0.56 >More info 0.07 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
379 OE WRKY40.4 -0.52 >More info -0.11 >More info OE WRKY40.4 none leaf Original data GEO bulk
380 Elevated CO2 AMPLE N DAY 0.52 >More info 0.11 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
381 AtGATA2ox 0.53 >More info 0.10 >More info Col seedling Original data GEO bulk
382 Shoot P recovery 0.55 >More info 0.07 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
383 rao2 H2O2 3h -0.52 >More info -0.10 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
384 rsl4 -0.52 >More info -0.10 >More info Col-0 Control root Original data GEO bulk
385 csn5 (csn5a-2 csn5b) light 0.50 >More info 0.12 >More info WT light Original data GEO bulk
386 ulp1c ulp1d 0.60 >More info 0.02 >More info col Original data GEO bulk
387 Laer Flg22 1h 0.54 >More info 0.07 >More info Laer Control leaf discs Original data GEO bulk
388 SCR-GR Time 12H Dex 0.54 >More info 0.07 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
389 ga1-3/brm-1 0.53 >More info 0.08 >More info wt shoots Original data GEO bulk
390 cat2-long-day 2d -0.53 >More info -0.08 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
391 auxin and brassinazole seedlings 0.51 >More info 0.10 >More info auxin seedlings Original data GEO bulk
392 WT Shoot Hypoxia 0.62 >More info -0.01 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
393 P35S:rGRF3 0.64 >More info -0.03 >More info WS Original data GEO bulk
394 myb50 xylem 0.56 >More info 0.04 >More info wt xylem xylem Original data GEO bulk
395 Nicotinamide-89hr 0.56 >More info 0.04 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
396 Elevated CO2 fully expanded leaf 0.50 >More info 0.10 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
397 Col whole leaf 6hpi 0.51 >More info 0.09 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
398 Mutant gh3.5-1D (AvrRpt2) 0.52 >More info 0.07 >More info Col-0 (AvrRpt2) Original data GEO bulk
399 WT Shoot-Pi 0.54 >More info 0.05 >More info WT Shoot+Pi shoots Original data GEO bulk
400 Col-0 24hpi A. brassicicola 0.56 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
401 HairpinZ 4 h (leaf) 0.61 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
402 vtc2-1 -0.56 >More info -0.01 >More info Col-0 whole plant Original data GEO bulk
403 -Sulfate 2 h 0.50 >More info 0.07 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
404 GiantCell Root -0.56 >More info 0.00 >More info Control Root laser captured giant cells Original data GEO bulk
405 siliques WT hypoxia 0.55 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
406 atmospheric CO2 low Mg root 0.50 >More info 0.06 >More info atmospheric CO2 normal Mg root Root Original data
407 psae1-3 stn7-1 0.51 >More info 0.04 >More info WS rosette leaves Original data GEO bulk
408 F1 whole seedlings root 0.50 >More info 0.04 >More info Col whole seedlings root Seedlings Original data GEO bulk
409 msh1 albino 0.57 >More info -0.03 >More info WT aerial part Original data GEO bulk
410 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
411 Atwrky63 -0.63 >More info 0.11 >More info Col0 none leaf Original data GEO bulk
412 epiF3 -0.50 >More info -0.01 >More info WT Col-0 aerial part Original data
413 tZ -0.52 >More info 0.01 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
414 MYB46-GR DEX -0.14 >More info 0.64 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
415 IRP1-OE-Fe--shoot 0.57 >More info -0.07 >More info COL-0-Fe--shoot shoot Original data
416 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.58 >More info 0.08 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
417 Infected Col-0 leaf -0.54 >More info 0.05 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
418 dcl2-1 -0.52 >More info 0.03 >More info Col-0 Original data GEO bulk
419 seedling 24h after Gamma WT 0.52 >More info -0.03 >More info seedling day 2 unirradiated WT 24h Original data
420 WT Nitrate 0.5h 0.50 >More info -0.01 >More info WT untreated Original data GEO bulk
421 SLWF infested 0.56 >More info -0.08 >More info SLWF uninfested rosette tissue Original data GEO bulk
422 Col PSTDC3000 24h 0.60 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
423 php 0.51 >More info -0.07 >More info WT Original data GEO bulk
424 spx1 spx2 resupplied Pi 4h -0.67 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
425 WT NAA 1h 0.50 >More info -0.07 >More info WT 0h Leaf tissue Original data GEO bulk
426 TaFLS overexpression line (OE1) -0.54 >More info 0.13 >More info Col-0 Rosette leaves Original data
427 FarRed Light 45min 0.15 >More info -0.55 >More info White Light 45min Original data Light treatments
428 total mRNA eif3k 0.13 >More info -0.53 >More info total mRNA WT aerial part Original data GEO bulk
429 dor control 0.54 >More info -0.15 >More info WT control Original data GEO bulk
430 Inflorescences Trp1 -0.28 >More info 0.67 >More info Inflorescences ler inflorescences Original data GEO bulk
431 seed germinating in countinuous light 24h SL -0.31 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
432 xyl-grown cell culture- 1h 1mM Suc 0.29 >More info -0.64 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
433 P. infestans 6 h (leaf) 0.50 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
434 WT roots - Fe 0.52 >More info -0.18 >More info WT roots + Fe Roots Original data GEO bulk
435 Ba1 UV 0.23 >More info -0.57 >More info Ba1 mock UV seedling Original data
436 Apex octa 18DAS -0.50 >More info 0.19 >More info Apex Col 14DAS Original data GEO bulk
437 shoot hypoxia p35S 0.28 >More info -0.59 >More info shoot hypoxia total Original data GEO bulk
438 swn-7 -0.56 >More info 0.27 >More info Col whole plant Original data GEO bulk
439 hrpA fliC 7h 0.53 >More info -0.26 >More info Mock 7h hrpA fliC Original data GEO bulk
440 shoot control p35S 0.38 >More info -0.59 >More info shoot control total Original data GEO bulk
441 0h hml 0.50 >More info -0.31 >More info 0h wt Original data
442 Shoot apex inflorescence (after bolting) -0.47 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
443 Apex mir-3TCP 14DAS -0.53 >More info 0.46 >More info Apex Col 14DAS Original data GEO bulk