4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on WT 90-105 min Xanthomonas
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Score Experiment Correlation from
WT 90-105 min Xanthomonas		 Correlation to
WT 90-105 min Xanthomonas		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT 90-105 min Xanthomonas 1.00 >More info 1.00 >More info WT T0 Original data GEO bulk
2 WT 2-4h Xanthomonas 0.87 >More info 0.88 >More info WT T0 Original data GEO bulk
3 Wounding Stress3 h (shoot) 0.80 >More info 0.75 >More info Stress mock 3 h (shoot) Original data Stress treatments
4 Laer Alternaria 3dpi -0.76 >More info -0.73 >More info Laer Control leaf discs Original data GEO bulk
5 Lipopolysaccaride4 h (leaf) 0.68 >More info 0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
6 Col-0 Flg22 4h 0.68 >More info 0.71 >More info Col-0 H2O 4h Original data GEO bulk
7 GST 4 h (leaf) 0.62 >More info 0.77 >More info Mock 4 h (leaf) Original data Elicitor treatments
8 Transgenic LEC2GR Seedling 1h Dex 0.69 >More info 0.67 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
9 WT 3h -P 0.69 >More info 0.66 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
10 lht1 untreated 0.65 >More info 0.69 >More info WT untreated untreated leaf Original data GEO bulk
11 +1.6 mM Tween 20 1 h. 0.61 >More info 0.72 >More info +distilled water 1 h. Original data GEO bulk
12 col-5 hrpA 2h 0.71 >More info 0.60 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
13 Col-0-avrB-6h 0.65 >More info 0.66 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
14 WT-Dry 0.62 >More info 0.67 >More info WT-CK dehydration treatment 1h Original data
15 Flagellin 4 h (leaf) 0.64 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
16 rosette Dark Wounded 0.72 >More info 0.56 >More info rosette Dark Control Original data GEO bulk
17 Infected pft1 leaf 0.58 >More info 0.70 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
18 current injection 0.58 >More info 0.70 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
19 WT flg22 2h 0.70 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
20 AmGSTF1 expressor -0.58 >More info -0.69 >More info WT leaf tissue Original data GEO bulk
21 gun1gun5 far-red pretreated -0.65 >More info -0.61 >More info WT far-red pretreated Original data GEO bulk
22 flu 0.66 >More info 0.58 >More info WT Col Original data GEO bulk
23 hrcC 0.66 >More info 0.58 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
24 hrpA fliC 7h 0.63 >More info 0.61 >More info Mock 7h hrpA fliC Original data GEO bulk
25 wt systemic wounding 0.61 >More info 0.63 >More info wt control leaves Original data GEO bulk
26 shoots bhlh100/101 100uM Fe 0.48 >More info 0.76 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
27 irradiated leaf (cmt 5d) 0.67 >More info 0.56 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
28 tunicamycin -0.53 >More info -0.70 >More info DMF Original data GEO bulk
29 seedling 24h after Gamma WT 0.56 >More info 0.66 >More info seedling day 2 unirradiated WT 24h Original data
30 shoots WT 0uM Fe 0.74 >More info 0.48 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
31 Phaseolicola 2 h (leaf) 0.66 >More info 0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
32 hrpA 7h 0.61 >More info 0.60 >More info Mock 7h hrpA Original data GEO bulk
33 rosette Light Wounded 0.67 >More info 0.53 >More info rosette Light Control Original data GEO bulk
34 CLO 4mM 0.59 >More info 0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
35 AvrRpt2 Col-0 6hpi 0.74 >More info 0.45 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
36 WT flg22 1h 0.67 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
37 WT Na2S 0.55 >More info 0.63 >More info WT water Na2S leaf Original data GEO bulk
38 WT NAA/flg 1h 0.67 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
39 GST NPP1 4 h (leaf) 0.64 >More info 0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
40 AZC 0.66 >More info 0.51 >More info noneHS Original data GEO bulk
41 WT Red light 1h 0.60 >More info 0.57 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
42 HopZ1a treated 0.66 >More info 0.51 >More info col Original data GEO bulk
43 SA 4mM 0.45 >More info 0.72 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
44 Col-0 WT HL 3h 0.68 >More info 0.48 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
45 downy mildew cotyledons late stage 0.65 >More info 0.51 >More info mock inoculated Cotyledons Original data GEO bulk
46 lht1 PstDC3000 48h 0.65 >More info 0.51 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
47 wnk8-2 untreated -0.54 >More info -0.62 >More info Col-0 untreated seedlings Original data GEO bulk
48 col-5 DC3000-avrRpm 4h 0.69 >More info 0.47 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
49 E.coli TUV86 2 fliC 7h 0.60 >More info 0.55 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
50 seedling 24h after Gamma atm-1 0.45 >More info 0.70 >More info seedling day 2 unirradiated atm-1 24h Original data
51 dTLEc systemic wounding -0.50 >More info -0.64 >More info wt systemic wounding leaves Original data GEO bulk
52 miR393 flg22 1h 0.62 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
53 pnp1-1 1wk +P 0.66 >More info 0.48 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
54 HopZ1a treated ulp1c ulp1d 0.62 >More info 0.52 >More info col Original data GEO bulk
55 mpk6-ko Flg22 4h 0.59 >More info 0.55 >More info mpk6-ko H2O 4h Original data GEO bulk
56 DC3000 2 h (leaf) 0.62 >More info 0.51 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
57 pXVE:HA-EDM2-a untreated -0.50 >More info -0.63 >More info Col-0 untreated seedlings Original data GEO bulk
58 Pst-DC3000(avrRpm1)-4hpi 0.60 >More info 0.52 >More info Pst-DC3000-4hpi Original data GEO bulk
59 plant (tga2-5-6) 4h phytoprostane A1 0.57 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
60 Nicotinamide-61hr 0.61 >More info 0.50 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
61 Col-0 DEX Shade -0.52 >More info -0.59 >More info Col-0 DEX WL seedlings Original data
62 B.cinerea 18 h infection 0.54 >More info 0.57 >More info Mock 18 h Original data Botrytis cinerea infection
63 Botrytis cinerea 18h 0.54 >More info 0.57 >More info control 18h Original data GEO bulk
64 leaf13 0.62 >More info 0.48 >More info unwounded leaves none Original data GEO bulk
65 ice1 control 0.53 >More info 0.56 >More info WT control Original data GEO bulk
66 P.syringae AvrRpt2 4 h (leaf) 0.50 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
67 Laer Pst DC3000 12hpi -0.59 >More info -0.50 >More info Laer Control leaf discs Original data GEO bulk
68 Nicotinamide-85hr 0.59 >More info 0.49 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
69 IAA/inhibitor A Treated 0.53 >More info 0.55 >More info IAA Treated Original data GEO bulk
70 anac017-1 H2O2 3h -0.58 >More info -0.50 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
71 35S::ERF104 Flg22 4h 0.60 >More info 0.48 >More info 35S::ERF104 H2O 4h Original data GEO bulk
72 Shoot -K 0.53 >More info 0.55 >More info Control-shoot Original data GEO bulk
73 K starvation (shoot) 0.53 >More info 0.55 >More info Ws (shoot) Original data GEO bulk
74 flu over-tAPX 0.62 >More info 0.46 >More info WT Col Original data GEO bulk
75 irradiated leaf (WT 5d) 0.40 >More info 0.68 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
76 upf1 0.56 >More info 0.51 >More info WT whole plant Original data GEO bulk
77 Blue Light 4 h 0.44 >More info 0.63 >More info White Light 4 h Original data Light treatments
78 coi1-2 0.51 >More info 0.55 >More info Col-0 mock Whole seedling Original data GEO bulk
79 Pto inoculated 0.59 >More info 0.47 >More info col Original data GEO bulk
80 inhibitor A Treated 0.54 >More info 0.52 >More info Negative Control Original data GEO bulk
81 rcf1-1 cold 12h 0.57 >More info 0.49 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
82 WT Col-0 Bgh inoculated 0.67 >More info 0.39 >More info WT Col-0 Un-inoculated Original data GEO bulk
83 wnk8-1 untreated -0.46 >More info -0.60 >More info Col-0 untreated seedlings Original data GEO bulk
84 Selenate (root) 0.52 >More info 0.53 >More info Ws (root) Original data GEO bulk
85 Root Selenate 0.52 >More info 0.53 >More info Root control 40 micromolar selenate Root Original data GEO bulk
86 chito-octamer 0.49 >More info 0.56 >More info Col Mock Original data GEO bulk
87 gpa1-4/agb1-2 ozone 2d -0.46 >More info -0.59 >More info Col ozone 2d ozone Original data GEO bulk
88 A6 mutant 0.58 >More info 0.46 >More info WT rosette leaves Rosette leaves Original data GEO bulk
89 Elevated CO2 fully expanded leaf 0.53 >More info 0.51 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
90 shoots bhlh100/101 0uM Fe 0.59 >More info 0.45 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
91 CHLD reduction 0.51 >More info 0.53 >More info Col-0 dex green tissue Original data GEO bulk
92 WT powdery mildew 0.60 >More info 0.44 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
93 9 hr Hypoxia 1 hr recovery IP RNA 0.56 >More info 0.48 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
94 AFB1 flg22 1h 0.60 >More info 0.44 >More info WT 0h Leaf tissue Original data GEO bulk
95 mutant acs6E (single mutant) 0.52 >More info 0.52 >More info col control (single mutant) Original data GEO bulk
96 Col0-PsmES4326-24hpi 0.43 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
97 E.coli 0157 H7 7h 0.56 >More info 0.47 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
98 P.p 2.5hai 0.62 >More info 0.41 >More info At-Control roots Original data GEO bulk
99 col-5 hrpA 12h 0.55 >More info 0.48 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
100 col-5 DC3000 4h 0.53 >More info 0.50 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
101 erf104-ko Flg22 4h 0.46 >More info 0.57 >More info erf104-ko H2O 4h Original data GEO bulk
102 gun5 control 0.35 >More info 0.68 >More info Col-0 control Original data GEO bulk
103 pepr1-1 Pepr2-3 +Pep2 2h -0.58 >More info -0.44 >More info WT +Pep2 2h Pep2 Original data GEO bulk
104 DC3000 hrcC 2 h (leaf) 0.59 >More info 0.43 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
105 sid2-2 9 hpi A. brassicicola 0.58 >More info 0.44 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
106 npr1 sni1 ssn2 SA -0.47 >More info -0.55 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
107 ice1 6H Cold 0.44 >More info 0.58 >More info WT 6H Cold Original data GEO bulk
108 nia1nia2noa1-2 0.59 >More info 0.42 >More info Col-0 whole seedlings Original data GEO bulk
109 Dark 40min pls UV-AB 5min 0.45 >More info 0.56 >More info Dark 45 min Original data Light treatments
110 FarRed Light 4 h 0.36 >More info 0.65 >More info White Light 4 h Original data Light treatments
111 Day Time Treatment 0.45 >More info 0.56 >More info Day Time Control 1hr white light pulse aerial rosette Original data
112 NJ15 0.30 >More info 0.71 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
113 col-5 hrpA 4h 0.59 >More info 0.41 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
114 ein2-1 9 hpi A. brassicicola 0.63 >More info 0.37 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
115 ppi2 0.52 >More info 0.48 >More info WT whole plant Original data GEO bulk
116 WT chitooctaose 0.50 >More info 0.50 >More info WT water Original data GEO bulk
117 Nicotinamide-57hr 0.65 >More info 0.35 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
118 max3GR24 (1 uM) 0.40 >More info 0.60 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
119 cat2-hCO2 -0.43 >More info -0.57 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
120 9 hr Hypoxia 1 hr recovery Total RNA 0.52 >More info 0.47 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
121 anac017-2 AntimycinA 3h -0.58 >More info -0.41 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
122 UV 0.54 >More info 0.45 >More info WT aerial region Original data GEO bulk
123 Cor hrpS 10h 0.65 >More info 0.34 >More info Mock 10h Cor hrpS Original data GEO bulk
124 35S:RPS4 eds1-2 8h -0.59 >More info -0.40 >More info 35S:RPS4 8h leaves Original data
125 WT+chitooctaose 0.41 >More info 0.58 >More info WT+water chitooctaose seedlings Original data GEO bulk
126 Leaf systemic 0.40 >More info 0.59 >More info Leaf control vegetative leaf Original data GEO bulk
127 WT seedlings NaCl -0.47 >More info -0.52 >More info WT seedlings control Seedlings Original data GEO bulk
128 toc1-1-65hr 0.54 >More info 0.44 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
129 Nicotinamide-89hr 0.54 >More info 0.44 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
130 rao2 H2O2 3h -0.63 >More info -0.35 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
131 Col whole leaf 6hpi 0.51 >More info 0.47 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
132 Laer Flg22 1h 0.59 >More info 0.38 >More info Laer Control leaf discs Original data GEO bulk
133 ice1 3H Cold 0.54 >More info 0.43 >More info WT 3H Cold Original data GEO bulk
134 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.63 >More info 0.34 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
135 bio4-1 mutant watered00µM biotin leaves -0.53 >More info -0.44 >More info bio4-1 mutant leaves leaves Original data GEO bulk
136 WT-SA 0.55 >More info 0.42 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
137 coi1-16 ein2 sid2 ozone 0.61 >More info 0.36 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
138 35S:VND7-VP16-GR+CHX 0.29 >More info 0.68 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
139 bio4-1 mutant leaves 0.42 >More info 0.55 >More info WT leaves leaves Original data GEO bulk
140 Leaf wounded 0.39 >More info 0.58 >More info Leaf control vegetative leaf Original data GEO bulk
141 seedling 1.5h after HZE atm-1 -0.41 >More info -0.56 >More info seedling day 1 unirradiated atm-1 1.5h Original data
142 efr-1 +elf18 10h -0.56 >More info -0.40 >More info WT +elf18 10h elf18 Original data GEO bulk
143 gai MeJA 1h -0.50 >More info -0.46 >More info Laer MeJA 1h leaf discs Original data GEO bulk
144 Nicotinamide-81hr 0.62 >More info 0.34 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
145 essp4/sdg8-5 mutant 0.59 >More info 0.37 >More info wild type leaf Original data GEO bulk
146 sdg8-2 mutant 0.57 >More info 0.39 >More info wild type leaf Original data GEO bulk
147 del1-1 mutant 5d uninfected 0.60 >More info 0.35 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
148 Col-0 9 hpi A. brassicicola 0.60 >More info 0.35 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
149 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.33 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
150 IMI 4mM 0.66 >More info 0.29 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
151 Col-0 37C 0.41 >More info 0.54 >More info Col-0 22C Original data GEO bulk
152 msh1 albino 0.60 >More info 0.34 >More info WT aerial part Original data GEO bulk
153 CMP 4hr 0.57 >More info 0.37 >More info Acetone 4hr root Original data GEO bulk
154 WT-NOCO2 INFECTED 0.52 >More info 0.42 >More info WT-MOCK Original data GEO bulk
155 DFPM 0.59 >More info 0.35 >More info control Original data GEO bulk
156 Red/FR Light 4 h -0.32 >More info -0.62 >More info FarRed Light 4 h Original data Light treatments
157 toc1-1-89hr 0.33 >More info 0.61 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
158 pip3 At2g19270 RNAi 24 0.35 >More info 0.59 >More info Nd-1 whole plant Original data GEO bulk
159 ref6-1 0.43 >More info 0.51 >More info Col whole seedling Original data GEO bulk
160 Mutant cry1 (High Light) -0.55 >More info -0.38 >More info Col-0 (High Light) Original data GEO bulk
161 LTN008-2 aza-dc 0.55 >More info 0.38 >More info LTN012-2 Mock Original data
162 cry1 high light -0.55 >More info -0.38 >More info Col-O high light Original data GEO bulk
163 Heat and anoxia 0.39 >More info 0.54 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
164 Col-0 ozone 0.63 >More info 0.30 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
165 WT resupplied Pi 4h 0.52 >More info 0.41 >More info WT complete seedlings Original data
166 Light 4h steady-state 0.43 >More info 0.50 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
167 Light 0.5h polysome-bound 0.34 >More info 0.59 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
168 Shoot -Cs 0.41 >More info 0.52 >More info Control-shoot Original data GEO bulk
169 MIL4 ox -0.34 >More info -0.59 >More info Col Original data GEO bulk
170 ein2-1 24hpi A. brassicicola 0.29 >More info 0.64 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
171 seedling 12h after Gamma WT -0.33 >More info -0.60 >More info seedling day 1 unirradiated WT 12h Original data
172 Col BTH 0.25 >More info 0.67 >More info Col rosettes Original data GEO bulk
173 Te ozone 0.62 >More info 0.30 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
174 cop1 Seedling BL 0.50 >More info 0.42 >More info WT Seedling BL Original data GEO bulk
175 seedling 12h after Gamma atm-1 -0.29 >More info -0.63 >More info seedling day 1 unirradiated atm-1 12h Original data
176 miR393 flg22 2h 0.52 >More info 0.39 >More info WT 0h Leaf tissue Original data GEO bulk
177 MYB51 OE -0.56 >More info -0.35 >More info WT for ATR1/MYB51 Original data GEO bulk
178 WT leaves - Fe 0.54 >More info 0.37 >More info WT leaves + Fe Leaves Original data GEO bulk
179 cs26 long day 0.54 >More info 0.37 >More info Leaves-WT-LD leaf Original data GEO bulk
180 Cor 10h 0.56 >More info 0.35 >More info Mock 10h Cor Original data GEO bulk
181 ASL9-ox -0.55 >More info -0.36 >More info WT aerial parts of seedlings Original data GEO bulk
182 Heat shock optimum 0.26 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
183 20h Col-0 -0.26 >More info -0.65 >More info 00h Col-0 Original data GEO bulk
184 Night Time Treatment 0.37 >More info 0.54 >More info Night Time Control 1hr white light pulse aerial rosette Original data
185 dde2-2 24hpi A. brassicicola 0.28 >More info 0.63 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
186 Col upon hypoxia 6 hrs 0.59 >More info 0.32 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
187 coi1-16 ein2 sid2 ctrl -0.62 >More info -0.29 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
188 Cd 18h root 0.34 >More info 0.56 >More info WT-Untreated Root Original data GEO bulk
189 pnp1-1 1wk -P 0.51 >More info 0.39 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
190 Roots Cd -0.53 >More info -0.37 >More info Roots control Cd Root Original data GEO bulk
191 safener treated 0.51 >More info 0.39 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
192 chito-tetramer 0.40 >More info 0.50 >More info Col Mock Original data GEO bulk
193 Atwrky63 -0.57 >More info -0.33 >More info Col0 none leaf Original data GEO bulk
194 Laer Flg22+GA 1h 0.56 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
195 1h +Pi -0.34 >More info -0.55 >More info 1h -Pi root Original data GEO bulk
196 Elevated CO2 leaf primordia 0.33 >More info 0.56 >More info Ambient CO2 leaf primordia leaf primordia Original data
197 Whole root - S 3H 0.38 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
198 08h Col-0 -0.25 >More info -0.64 >More info 00h Col-0 Original data GEO bulk
199 FarRed Light 45min -0.18 >More info -0.71 >More info White Light 45min Original data Light treatments
200 AgNO3 3 h 0.55 >More info 0.33 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
201 Col ozone 2d 0.51 >More info 0.37 >More info Col clean-air 2d ozone Original data GEO bulk
202 Dark 6h hml -0.53 >More info -0.35 >More info 0h hml Original data
203 WT +Pep2 2h 0.53 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
204 Laer pretreat GA Flg22 1h 0.17 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
205 Col whole leaf 7dpi 0.52 >More info 0.35 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
206 Seedling-HeatStressed TOTALmRNA 0.27 >More info 0.60 >More info Seedling-control TOTALmRNA seedling Original data
207 dark-hs 0.30 >More info 0.57 >More info dark-control seedling Original data
208 Dark 40 min pls UV-A 5 min 0.31 >More info 0.55 >More info Dark 45 min Original data Light treatments
209 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.61 >More info 0.25 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
210 5-Triiodobenzoic acid3 h 0.50 >More info 0.36 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
211 Dark 6h wt -0.50 >More info -0.36 >More info 0h wt Original data
212 Seedling-HeatStressed POLYSOMESmRNA 0.27 >More info 0.59 >More info Seedling-control POLYSOMESmRNA seedling Original data
213 Light 0.5h steady-state 0.29 >More info 0.57 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
214 anac017-2 H2O2 3h -0.56 >More info -0.29 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
215 pip3 At2g19270 RNAi 32 0.32 >More info 0.53 >More info Nd-1 whole plant Original data GEO bulk
216 naxillin 3h 0.50 >More info 0.35 >More info before treatment naxillin root Original data GEO bulk
217 penta Control 0.56 >More info 0.28 >More info Laer Control leaf discs Original data GEO bulk
218 cca1-lhy 30m light -0.28 >More info -0.56 >More info 30m light whole seedlings Original data GEO bulk
219 IAA7mII over-expressor IAA Treated 0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
220 AFB1 flg22 2h 0.56 >More info 0.27 >More info WT 0h Leaf tissue Original data GEO bulk
221 flu dark 8hours/30 minute light 0.19 >More info 0.64 >More info col dark 8hours/30 minute light Original data GEO bulk
222 CT101 ozone 0.60 >More info 0.23 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
223 Cor 24h 0.56 >More info 0.26 >More info Mock 24h Cor Original data GEO bulk
224 dor control 0.53 >More info 0.29 >More info WT control Original data GEO bulk
225 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.51 >More info -0.31 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
226 csn5 (csn5a-2 csn5b) light 0.51 >More info 0.31 >More info WT light Original data GEO bulk
227 Leafminer damaged seedlings 0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
228 C24 ozone 0.58 >More info 0.24 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
229 Laer Flg22 2h 0.59 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
230 sim smr1 -0.25 >More info -0.57 >More info WT seedling Original data GEO bulk
231 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.31 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
232 Col-0 SA 0.56 >More info 0.25 >More info Col-0 Original data GEO bulk
233 dcl1-7 0.54 >More info 0.27 >More info Ler Original data GEO bulk
234 arf2 brz -0.50 >More info -0.31 >More info arf2 mock Original data GEO bulk
235 Red Light 4 h -0.18 >More info -0.63 >More info White Light 4 h Original data Light treatments
236 WT NAA/flg 2h 0.51 >More info 0.29 >More info WT 0h Leaf tissue Original data GEO bulk
237 AtGATA2ox 0.56 >More info 0.24 >More info Col seedling Original data GEO bulk
238 NAA 3h 0.58 >More info 0.22 >More info before treatment NAA root Original data GEO bulk
239 Dark 1day hml -0.51 >More info -0.28 >More info 0h hml Original data
240 Sulfometuron EC50 0.50 >More info 0.29 >More info Carrier Original data GEO bulk
241 Prohexadione 3 h -0.20 >More info -0.59 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
242 16h Col-0 -0.13 >More info -0.66 >More info 00h Col-0 Original data GEO bulk
243 Protoplast Induced 0.27 >More info 0.51 >More info Uninduced Original data GEO bulk
244 Laer Flg22+GA 2h 0.57 >More info 0.20 >More info Laer Control leaf discs Original data GEO bulk
245 ex2 flu dark 8hours/30 minute light 0.21 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
246 Heat 0.24 >More info 0.53 >More info Control 90 minutes at 38°C. Original data GEO bulk
247 IXB induced 0.27 >More info 0.50 >More info Methanol IXB Suspension cells Original data GEO bulk
248 seedling 6h after HZE atm-1 -0.20 >More info -0.57 >More info seedling day 1 unirradiated atm-1 6h Original data
249 psae1-3 stn7-1 0.53 >More info 0.23 >More info WS rosette leaves Original data GEO bulk
250 WT 1wk -P 0.54 >More info 0.22 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
251 Ws HS 0.18 >More info 0.58 >More info Ws control heat shocked seedling Original data GEO bulk
252 seedling 12h after HZE atm-1 -0.19 >More info -0.57 >More info seedling day 1 unirradiated atm-1 12h Original data
253 Mutant siz1-3 (Drought) 0.51 >More info 0.24 >More info Col-0 (Drought) Original data GEO bulk
254 CBF3 100mM NaCl -0.50 >More info -0.25 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
255 siz1-3 drought 0.51 >More info 0.24 >More info Col-0 drought Original data GEO bulk
256 WT Bc inoculation 14h 0.54 >More info 0.20 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
257 DUO1 induced 12h -0.54 >More info -0.19 >More info 12hr-not-induced whole plant Original data GEO bulk
258 Dark 44min pls RedLigh 1min 0.22 >More info 0.51 >More info Dark 45 min Original data Light treatments
259 Octopus mutant DYG25 0.23 >More info 0.50 >More info WS Original data GEO bulk
260 Col-0 HS 0.14 >More info 0.59 >More info Col-0 control heat shocked seedling Original data GEO bulk
261 WT (Col-0) heat shock 0.14 >More info 0.59 >More info WT (Col-0) whole seedling Original data GEO bulk
262 oas-a1.1 Cd 24h 0.54 >More info 0.18 >More info Cd 24h root Shoot Original data GEO bulk
263 wrky33 mock 0.60 >More info 0.12 >More info WT mock 14 hour mock control leaves Original data
264 sid2-avrB-6h 0.18 >More info 0.54 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
265 penta MeJA 1h 0.61 >More info 0.10 >More info Laer MeJA 1h leaf discs Original data GEO bulk
266 gpa1-4/agb1-2 clean-air 3h -0.51 >More info -0.20 >More info Col clean-air 3h clean-air Original data GEO bulk
267 dde2-2 9 hpi A. brassicicola 0.51 >More info 0.19 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
268 swn-7 -0.58 >More info -0.12 >More info Col whole plant Original data GEO bulk
269 Atss3 Light1 0.13 >More info 0.57 >More info Atss3 Dark0.5 Original data GEO bulk
270 opr3 OPDA 0.5 h 0.08 >More info 0.62 >More info opr3 0 h Original data GEO bulk
271 wrky33 Bc inoculation 14h 0.56 >More info 0.13 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
272 Nicotinamide-53hr 0.56 >More info 0.13 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
273 npr1-1 SA -0.51 >More info -0.18 >More info Col-0 SA complete seedling Original data
274 30m light 0.13 >More info 0.54 >More info before light whole seedlings Original data GEO bulk
275 JA 3h 0.15 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
276 AtMYB30-as 90-105 min Xanthomonas 0.56 >More info 0.10 >More info WT 90-105 min Xanthomonas Original data GEO bulk
277 Red/FR Light45min -0.12 >More info 0.78 >More info FarRed Light 45min Original data Light treatments
278 seedling -S Exp 0.14 >More info 0.52 >More info seedling FN Exp seedling Original data
279 -Sulfate 24 h 0.08 >More info 0.58 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
280 penta Alternaria 3dpi 0.50 >More info 0.15 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
281 sng1 0.12 >More info 0.53 >More info WT aerial region Original data GEO bulk
282 Col whole leaf 3dpi 0.12 >More info 0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
283 sta1 0.52 >More info 0.11 >More info WT Original data GEO bulk
284 Truncated AC2 T2 -0.55 >More info -0.08 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
285 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.55 >More info 0.08 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
286 ATR1 OE -0.53 >More info -0.08 >More info WT for ATR1/MYB51 Original data GEO bulk
287 siliques AtHb1 control 0.09 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
288 HairpinZ 4 h (leaf) 0.63 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
289 4C 1h 0.03 >More info 0.57 >More info 4C 0h Original data GEO bulk
290 Shoot -P -0.51 >More info -0.06 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
291 pvip1 pvip2 seedling 0.59 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
292 ex1 flu dark 8hours/30 minute light -0.00 >More info 0.57 >More info col dark 8hours/30 minute light Original data GEO bulk
293 QC pSCR 3h BL 0.04 >More info 0.51 >More info QC pSCR 0h BL brassinosteroid root Original data
294 WT roots - Fe 0.50 >More info 0.04 >More info WT roots + Fe Roots Original data GEO bulk
295 Mutant lwd1_lwd2 0.07 >More info -0.59 >More info Wildtype for phy mutants Original data GEO bulk
296 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.07 >More info -0.59 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
297 seed germinating in countinuous light 24h SL -0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
298 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
299 Col in Pi deficiency medium -0.01 >More info 0.50 >More info Col in control medium root Original data GEO bulk
300 ORS1 induced 0.51 >More info -0.03 >More info mock-induced rosette leaves Original data GEO bulk
301 ptpks2 -0.05 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
302 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
303 P. infestans 6 h (leaf) 0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
304 Full AC2 T2 0.51 >More info -0.12 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
305 Shoot apex inflorescence (after bolting) -0.35 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
306 WT NAA 1h 0.58 >More info -0.28 >More info WT 0h Leaf tissue Original data GEO bulk