4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 08h Col-0
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List of experiments correlated with "08h Col-0"  Help Download transcriptome of top 30
Score Experiment Correlation from
08h Col-0		 Correlation to
08h Col-0		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 08h Col-0 1.00 >More info 1.00 >More info 00h Col-0 Original data GEO bulk
2 12h Col-0 0.92 >More info 0.90 >More info 00h Col-0 Original data GEO bulk
3 16h Col-0 0.86 >More info 0.87 >More info 00h Col-0 Original data GEO bulk
4 04h Col-0 0.81 >More info 0.86 >More info 00h Col-0 Original data GEO bulk
5 20h Col-0 0.83 >More info 0.79 >More info 00h Col-0 Original data GEO bulk
6 seedling 12h after Gamma atm-1 0.80 >More info 0.80 >More info seedling day 1 unirradiated atm-1 12h Original data
7 seedling 6h after HZE atm-1 0.82 >More info 0.71 >More info seedling day 1 unirradiated atm-1 6h Original data
8 seedling 12h after Gamma WT 0.79 >More info 0.73 >More info seedling day 1 unirradiated WT 12h Original data
9 psad1 -0.78 >More info -0.69 >More info WS rosette leaves Original data GEO bulk
10 dde2-2 24hpi A. brassicicola -0.74 >More info -0.73 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
11 pip3 At2g19270 RNAi 24 -0.78 >More info -0.68 >More info Nd-1 whole plant Original data GEO bulk
12 seedling 12h after HZE atm-1 0.74 >More info 0.72 >More info seedling day 1 unirradiated atm-1 12h Original data
13 ein2-1 24hpi A. brassicicola -0.75 >More info -0.66 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
14 Atss3 Dark8 -0.70 >More info -0.71 >More info Atss3 Dark0.5 Original data GEO bulk
15 WT Na2S -0.73 >More info -0.67 >More info WT water Na2S leaf Original data GEO bulk
16 seedling 6h after Gamma atm-1 0.75 >More info 0.64 >More info seedling day 1 unirradiated atm-1 6h Original data
17 sid2-2 24hpi A. brassicicola -0.73 >More info -0.66 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
18 WT cold 12 h 0.70 >More info 0.69 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
19 pip3 At2g19270 RNAi 32 -0.79 >More info -0.59 >More info Nd-1 whole plant Original data GEO bulk
20 hsfa2 KO 0.76 >More info 0.60 >More info WT (Col-0) whole seedling Original data GEO bulk
21 psad1-1 stn7-1 -0.69 >More info -0.65 >More info Col-0 rosette leaves Original data GEO bulk
22 WT +Pep2 10h 0.74 >More info 0.58 >More info WT untreated Pep2 Original data GEO bulk
23 abi4-102 (I) 0.70 >More info 0.61 >More info Col (I) rosette Original data GEO bulk
24 Atss3 Light1 -0.66 >More info -0.64 >More info Atss3 Dark0.5 Original data GEO bulk
25 abi4 vtc2 (I) 0.71 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
26 aerial organ callus inducing medium 12 h 0.69 >More info 0.58 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
27 D2O 0.70 >More info 0.56 >More info H2O seedling Original data GEO bulk
28 toc1-1-77hr 0.62 >More info 0.63 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
29 spx1 spx2 complete 0.72 >More info 0.52 >More info WT complete seedlings Original data
30 low CO2 + dark -0.51 >More info -0.72 >More info normal CO2 + light Original data GEO bulk
31 cca1-lhy 60m light 0.58 >More info 0.64 >More info 60m light whole seedlings Original data GEO bulk
32 Nicotinamide-61hr -0.70 >More info -0.49 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
33 vtc2 (I) 0.65 >More info 0.53 >More info Col (I) rosette Original data GEO bulk
34 Laer Flg22(Agrobacterium) 2h 0.59 >More info 0.59 >More info Laer Control leaf discs Original data GEO bulk
35 dor control -0.74 >More info -0.44 >More info WT control Original data GEO bulk
36 35S::KLU 0.57 >More info 0.60 >More info WT Shoot Original data
37 Col-7 Sucrose 0.59 >More info 0.58 >More info col-7 Original data GEO bulk
38 Leafminer damaged seedlings 0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
39 WT +elf18 10h 0.62 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
40 toc1-1-89hr -0.57 >More info -0.56 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
41 Heat shock optimum 0.48 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
42 Nicotinamide-85hr -0.66 >More info -0.46 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
43 Nicotinamide-57hr -0.69 >More info -0.43 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
44 A2hsfa1-ox in quadruple mutant 0.64 >More info 0.47 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
45 hsfa2 KO heat shock 0.71 >More info 0.40 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
46 seedling 6h after HZE WT 0.74 >More info 0.36 >More info seedling day 1 unirradiated WT 6h Original data
47 FAMA induced 4h 0.62 >More info 0.47 >More info control 4h Whole seedling Original data GEO bulk
48 Cold Stress 24 h (shoot) 0.53 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
49 Glyphosate EC50 0.52 >More info 0.56 >More info Carrier (Glyphosate) Original data GEO bulk
50 WT cold 0.48 >More info 0.60 >More info WT control All aerial tissue Original data GEO bulk
51 oas-a1.1 Cd 24h 0.56 >More info 0.51 >More info Cd 24h root Shoot Original data GEO bulk
52 35S::PI ap3-3 35S::AP-GR +DEX 0.63 >More info 0.44 >More info 0hr DEX Original data GEO bulk
53 des1 water -0.66 >More info -0.41 >More info WT water water leaf Original data GEO bulk
54 nhx5-1/nhx6 0.58 >More info 0.48 >More info WT Rosette leaf Original data GEO bulk
55 MIL4 ox BTH 0.57 >More info 0.49 >More info Col BTH Original data GEO bulk
56 WT cold 24h 0.45 >More info 0.61 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
57 npr1-3 MOCK 48h -0.55 >More info -0.50 >More info Col-0 MOCK 48h Original data GEO bulk
58 seedling 12h after HZE WT 0.65 >More info 0.40 >More info seedling day 1 unirradiated WT 12h Original data
59 Wt-BA-sample 0.56 >More info 0.49 >More info Wt-dmso-sample seedling Original data
60 npr1 sni1 ssn2 SA 0.57 >More info 0.48 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
61 Nicotinamide-89hr -0.57 >More info -0.48 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
62 SOS1 100mM NaCl 0.70 >More info 0.34 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
63 Leafminer locally damaged thaliana seedlings 0.58 >More info 0.45 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
64 ms1 unpollinated -0.64 >More info -0.39 >More info WT 8h-pollinated pistil Original data GEO bulk
65 sdg2 0.64 >More info 0.39 >More info wt seedling Original data GEO bulk
66 toc1-1-73hr 0.61 >More info 0.42 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
67 Atss3 Dark4 -0.55 >More info -0.48 >More info Atss3 Dark0.5 Original data GEO bulk
68 toc1-1-53hr 0.62 >More info 0.41 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
69 Leafminer systemically damaged thaliana seedlings 0.53 >More info 0.49 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
70 Laer pretreat GA Flg22 1h 0.31 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
71 WT (Col) glucose 0.41 >More info 0.61 >More info WT (Col) glucose seedlings Original data GEO bulk
72 IAA/inhibitor A Treated -0.66 >More info -0.35 >More info IAA Treated Original data GEO bulk
73 35S::MBF1c -0.46 >More info -0.55 >More info control Original data GEO bulk
74 aerial organ callus inducing medium 24h 0.59 >More info 0.41 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
75 Mutant lwd1_lwd2 0.45 >More info 0.55 >More info Wildtype for phy mutants Original data GEO bulk
76 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.45 >More info 0.55 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
77 elf3-7-23ºC 0.47 >More info 0.53 >More info WT-23ºC Original data GEO bulk
78 camta1 leaf drought -0.49 >More info -0.51 >More info Col-0 leaf drought leaf Original data GEO bulk
79 WT (Col-0) inflorescence moderate drought day 3 0.51 >More info 0.48 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
80 toc1-1-85hr -0.56 >More info -0.43 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
81 WT Atum 2h 0.45 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
82 4C 24h 0.41 >More info 0.58 >More info 4C 0h Original data GEO bulk
83 col 24h4c set4 0.42 >More info 0.57 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
84 Inflorescence miR-NGA 0.51 >More info 0.47 >More info Inflorescence wt Original data GEO bulk
85 irradiated leaf (cmt 5d) -0.64 >More info -0.34 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
86 cpr5npr1svi1 0.52 >More info 0.46 >More info WT(COL) Original data GEO bulk
87 WT resupplied Pi 4h 0.50 >More info 0.48 >More info WT complete seedlings Original data
88 Col ozone 3h -0.39 >More info -0.59 >More info Col clean-air 3h ozone Original data GEO bulk
89 cca1-lhy 30m light 0.50 >More info 0.47 >More info 30m light whole seedlings Original data GEO bulk
90 Col whole leaf 6hpi -0.55 >More info -0.42 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
91 spch -0.58 >More info -0.39 >More info Col-0 WT whole seedling Original data GEO bulk
92 Laer GA 2h 0.33 >More info 0.64 >More info Laer Control leaf discs Original data GEO bulk
93 detached inflorescences 24h -0.44 >More info -0.53 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
94 Nicotinamide-81hr -0.61 >More info -0.35 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
95 OH1 0.53 >More info 0.43 >More info Col-0 leaves Original data GEO bulk
96 dor drought 0.46 >More info 0.50 >More info WT drought Original data GEO bulk
97 nhx5-2/nhx6 0.52 >More info 0.43 >More info WT Rosette leaf Original data GEO bulk
98 wrky72-2-NOCO2 INFECTED 0.55 >More info 0.39 >More info WT-NOCO2 INFECTED Original data GEO bulk
99 phyB Dark -0.54 >More info -0.40 >More info WT(Ler) Dark Original data GEO bulk
100 dcl3-1 -0.53 >More info -0.41 >More info Col-0 Original data GEO bulk
101 low CO2 + light -0.38 >More info -0.54 >More info normal CO2 + light Original data GEO bulk
102 gh3.5-1D 48 hpi 0.55 >More info 0.36 >More info Col-0 uninoculated Original data GEO bulk
103 flu dark 8hours/30 minute light -0.54 >More info -0.37 >More info col dark 8hours/30 minute light Original data GEO bulk
104 phyAphyB Dark 0.52 >More info 0.39 >More info phyB Dark Original data GEO bulk
105 leaf blade in FRD -0.52 >More info -0.39 >More info leaf blade in WL leaf blades Original data GEO bulk
106 shoots WT 0uM Fe -0.61 >More info -0.30 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
107 Dark 6h ivd 0.61 >More info 0.30 >More info 0h ivd Original data
108 ARR21C-ox 0.58 >More info 0.33 >More info Col-0 Original data ARR21C overexpression
109 aerial organ callus inducing medium 48 h 0.58 >More info 0.33 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
110 wrky72-1-NOCO2 INFECTED 0.52 >More info 0.38 >More info WT-NOCO2 INFECTED Original data GEO bulk
111 gun5 control -0.57 >More info -0.33 >More info Col-0 control Original data GEO bulk
112 apum23 0.50 >More info 0.39 >More info WT (Col-3) aerial parts Original data GEO bulk
113 WT 90-105 min Xanthomonas -0.64 >More info -0.25 >More info WT T0 Original data GEO bulk
114 Botrytis cinerea 48h 0.22 >More info 0.67 >More info control 48h Original data GEO bulk
115 WT leaves - Fe -0.70 >More info -0.19 >More info WT leaves + Fe Leaves Original data GEO bulk
116 Col-0-3h IAA 0.56 >More info 0.32 >More info Col-0-0h IAA whole plant Original data GEO bulk
117 toc1-1-65hr -0.61 >More info -0.27 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
118 hyl1 0.54 >More info 0.33 >More info Col-0 Original data GEO bulk
119 SOS1 0mM NaCl 0.56 >More info 0.31 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
120 vip3 -0.57 >More info -0.30 >More info WT Original data GEO bulk
121 BI-1-3h IAA 0.58 >More info 0.29 >More info BI-1-0h IAA whole plant Original data GEO bulk
122 Elevated CO2 AMPLE N DAY 0.31 >More info 0.55 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
123 rdr1-1 -0.50 >More info -0.36 >More info Col-0 Original data GEO bulk
124 WT no Pi 0.51 >More info 0.34 >More info WT complete seedlings Original data
125 vtc2-1 0.35 >More info 0.50 >More info Col-0 whole plant Original data GEO bulk
126 seedling 6h after Gamma WT 0.62 >More info 0.22 >More info seedling day 1 unirradiated WT 6h Original data
127 pad4-est1b-1-doublemutant 0.60 >More info 0.24 >More info pad4-mutant developed rosette leaves Original data GEO bulk
128 Dark 6h wt 0.58 >More info 0.26 >More info 0h wt Original data
129 WT (Col-0) inflorescence well-watered day 3 -0.65 >More info -0.18 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
130 Bur-0-3h IAA 0.51 >More info 0.32 >More info Bur-0h IAA whole plant Original data GEO bulk
131 4C 7d(SOIL) 0.32 >More info 0.50 >More info 4C 0h(SOIL) Original data GEO bulk
132 sfr6 drought 0.31 >More info 0.51 >More info WT drought All aerial tissue Original data GEO bulk
133 Octopus mutant DYG25 -0.59 >More info -0.23 >More info WS Original data GEO bulk
134 eif3h 0.55 >More info 0.26 >More info WT Original data GEO bulk
135 lht1 untreated -0.56 >More info -0.24 >More info WT untreated untreated leaf Original data GEO bulk
136 aerial organ callus inducing medium 96 h 0.54 >More info 0.26 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
137 PNO8 12 h -0.25 >More info -0.55 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
138 npr1 0.27 >More info 0.53 >More info WT(COL) Original data GEO bulk
139 Dark 6h hml 0.57 >More info 0.23 >More info 0h hml Original data
140 35S::CBF2 0.25 >More info 0.54 >More info Ws2 Original data GEO bulk
141 Inflorescence ngaquad 0.52 >More info 0.26 >More info Inflorescence wt Original data GEO bulk
142 root stele -S 0.27 >More info 0.51 >More info root stele pH5.7 Original data GEO bulk
143 root epidermis and lateral root cap -S 0.19 >More info 0.59 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
144 dTLEc control 0.51 >More info 0.26 >More info wt control leaves Original data GEO bulk
145 pkl-1 0.52 >More info 0.25 >More info WT whole seedling Original data GEO bulk
146 Laer MeJA 1h 0.53 >More info 0.24 >More info Laer Control leaf discs Original data GEO bulk
147 Ws seedlings 0.52 >More info 0.24 >More info ged1 seedlings Original data GEO bulk
148 ged1 seedlings -0.52 >More info -0.24 >More info Ws seedlings Original data GEO bulk
149 A2hsfa1-ox in quadruple mutant heat shock 0.56 >More info 0.19 >More info hsfa1 quadruple mutant heat shock whole seedling Original data GEO bulk
150 seedling h S Exp -0.00 >More info 0.75 >More info seedling -S Exp seedling Original data
151 hst5 0.53 >More info 0.21 >More info Col-0 Original data GEO bulk
152 an3-4 leaf primordia 0.52 >More info 0.22 >More info WT leaf primordia Original data GEO bulk
153 Laer Alternaria 3dpi 0.56 >More info 0.17 >More info Laer Control leaf discs Original data GEO bulk
154 ask1 mutant flower buds -0.53 >More info -0.20 >More info Ler WT flower buds unopened flower buds Original data GEO bulk
155 Shoot apex inflorescence (after bolting) 0.08 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
156 Mutant ag-12(flower) 0.51 >More info 0.21 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
157 msh1 stunt -0.53 >More info -0.16 >More info WT Col-0 above ground part of plant Original data GEO bulk
158 Dark 0.16 >More info 0.53 >More info Control Original data GEO bulk
159 Col leaves 120h LT 0.17 >More info 0.52 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
160 CBF3 100mM NaCl 0.58 >More info 0.11 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
161 FarRed Light 45min -0.08 >More info -0.61 >More info White Light 45min Original data Light treatments
162 Fei-0-3h IAA 0.50 >More info 0.17 >More info Fei-0-0h IAA whole plant Original data GEO bulk
163 Col-0 (t-zeatin 3 h) 0.15 >More info 0.52 >More info Col-0 Original data Cytokinin treatment of seedlings
164 Col0-PsmES4326-24hpi 0.06 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
165 bri1-116 -0.06 >More info 0.73 >More info Col seedling Original data GEO bulk
166 seed germinating in countinuous light 24h SL -0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
167 inhibitor A Treated -0.58 >More info -0.06 >More info Negative Control Original data GEO bulk
168 ex1 flu dark 8hours/30 minute light -0.53 >More info -0.10 >More info col dark 8hours/30 minute light Original data GEO bulk
169 4C 1h -0.08 >More info -0.55 >More info 4C 0h Original data GEO bulk
170 lht1 PstDC3000 48h -0.51 >More info -0.11 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
171 Col whole leaf 3dpi -0.05 >More info -0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
172 Roots Cd 0.08 >More info 0.53 >More info Roots control Cd Root Original data GEO bulk
173 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
174 xyl-grown cell culture- 1h 1mM Suc 0.06 >More info 0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
175 IAA/inhibitor B Treated -0.52 >More info -0.06 >More info IAA Treated Original data GEO bulk
176 21h-DC3000 avrRpm1 0.03 >More info 0.53 >More info 21h-DC3000 leaves Original data GEO bulk
177 vtc1-1 0.52 >More info 0.01 >More info Col-0 whole plant Original data GEO bulk
178 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
179 siliques AtHb1 control -0.01 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
180 Col BTH -0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
181 xrn4-5 flower 0.58 >More info -0.08 >More info Col-0 flower inflorescence Original data GEO bulk
182 2xX4x interploidy cross 0.50 >More info -0.09 >More info 2xX2x cross Original data GEO bulk
183 -Sulfate 24 h 0.19 >More info -0.60 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
184 ahg1-1 0.22 >More info -0.51 >More info ABA control Original data GEO bulk
185 NahG 0.30 >More info -0.56 >More info Col-0 Leaves Original data GEO bulk