WT Atum 2h

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on WT Atum 2h

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List of experiments correlated with "WT Atum 2h"

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Score	Experiment	Correlation from WT Atum 2h	Correlation to WT Atum 2h	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	WT Atum 2h	1.00 >More info	1.00 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
2	WT Atum 1h	0.64 >More info	0.69 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
3	WT NAA 2h	0.90 >More info	0.32 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
4	pip3 At2g19270 RNAi 24	-0.63 >More info	-0.58 >More info	Nd-1		whole plant	Original data	GEO bulk
5	WT Na2S	-0.53 >More info	-0.64 >More info	WT water	Na2S	leaf	Original data	GEO bulk
6	dde2-2 24hpi A. brassicicola	-0.57 >More info	-0.57 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
7	ein2-1 24hpi A. brassicicola	-0.49 >More info	-0.63 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
8	abi4-102 (I)	0.55 >More info	0.54 >More info	Col (I)		rosette	Original data	GEO bulk
9	Atss3 Light1	-0.53 >More info	-0.55 >More info	Atss3 Dark0.5			Original data	GEO bulk
10	sid2-2 24hpi A. brassicicola	-0.56 >More info	-0.51 >More info	Col-0 9 hpi A. brassicicola		3rd-5th true leaves	Original data
11	seedling 6h after Gamma atm-1	0.58 >More info	0.49 >More info	seedling day 1 unirradiated atm-1	6h		Original data
12	vtc2 (I)	0.62 >More info	0.44 >More info	Col (I)		rosette	Original data	GEO bulk
13	pip3 At2g19270 RNAi 32	-0.57 >More info	-0.48 >More info	Nd-1		whole plant	Original data	GEO bulk
14	seedling 12h after Gamma atm-1	0.58 >More info	0.46 >More info	seedling day 1 unirradiated atm-1	12h		Original data
15	seedling 6h after HZE atm-1	0.53 >More info	0.50 >More info	seedling day 1 unirradiated atm-1	6h		Original data
16	seedling 12h after HZE atm-1	0.56 >More info	0.47 >More info	seedling day 1 unirradiated atm-1	12h		Original data
17	Laer pretreat JA Flg22 0h	-0.38 >More info	-0.65 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
18	Laer Flg22(Agrobacterium) 2h	0.45 >More info	0.57 >More info	Laer Control		leaf discs	Original data	GEO bulk
19	Col BTH	0.34 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
20	toc1-1-73hr	0.53 >More info	0.47 >More info	WT-untreated-73hr	none	seedlings aerial tissue	Original data	GEO bulk
21	Laer pretreat GA Flg22 1h	0.29 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
22	08h Col-0	0.54 >More info	0.45 >More info	00h Col-0			Original data	GEO bulk
23	seedling 12h after Gamma WT	0.54 >More info	0.43 >More info	seedling day 1 unirradiated WT	12h		Original data
24	WT +elf18 10h	0.55 >More info	0.42 >More info	WT untreated	elf18		Original data	GEO bulk
25	WT +Pep2 10h	0.52 >More info	0.45 >More info	WT untreated	Pep2		Original data	GEO bulk
26	abi4 vtc2 (I)	0.58 >More info	0.39 >More info	Col (I)		rosette	Original data	GEO bulk
27	max3GR24 (1 uM)	-0.42 >More info	-0.55 >More info	max3 seedlings DMSO (mock)		whole seedlings	Original data	GEO bulk
28	16h Col-0	0.45 >More info	0.51 >More info	00h Col-0			Original data	GEO bulk
29	AmGSTF1 expressor	0.42 >More info	0.54 >More info	WT		leaf tissue	Original data	GEO bulk
30	Night Time Treatment	-0.43 >More info	-0.53 >More info	Night Time Control	1hr white light pulse	aerial rosette	Original data
31	seedling 12h after HZE WT	0.57 >More info	0.38 >More info	seedling day 1 unirradiated WT	12h		Original data
32	AFB1 0h	0.33 >More info	0.61 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
33	Cor hrpS 10h	0.23 >More info	0.70 >More info	Mock 10h	Cor hrpS		Original data	GEO bulk
34	Starch sheath 2 days NAA	0.34 >More info	0.57 >More info	Starch sheath T0	Stem starch sheath under NAA in vitro treatment before cell divission	laser capture microdissection	Original data	GEO bulk
35	20h Col-0	0.39 >More info	0.51 >More info	00h Col-0			Original data	GEO bulk
36	Leafminer damaged seedlings	0.33 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
37	Heat shock optimum	0.24 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
38	Leafminer systemically damaged thaliana seedlings	0.52 >More info	0.33 >More info	Undamaged thaliana seedlings	systemically damaged by leafminer	leaves	Original data	GEO bulk
39	seedling -S Exp	-0.22 >More info	-0.63 >More info	seedling FN Exp		seedling	Original data
40	Col-0 48 hpi	0.51 >More info	0.33 >More info	Col-0 uninoculated			Original data	GEO bulk
41	miR393 0h	0.55 >More info	0.29 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
42	NJ15	-0.26 >More info	-0.58 >More info	mock	sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates	Seedlings	Original data
43	SOS1 0mM NaCl	0.33 >More info	0.50 >More info	Ws 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
44	xyl-grown cell culture- 1h 1mM Suc	-0.19 >More info	-0.63 >More info	xyl-grown cell culture- 1h 1mM Xyl		cell culture	Original data
45	abh1 +ABA	-0.52 >More info	-0.28 >More info	Col-0 +ABA			Original data	GEO bulk
46	M6PR transgenic 0mM NaCl	0.30 >More info	0.50 >More info	Ws 0mM NaCl	0mM NaCl	leaf	Original data	GEO bulk
47	cpr5scv1	0.50 >More info	0.29 >More info	WT(COL)			Original data	GEO bulk
48	sdg8-2 mutant	-0.27 >More info	-0.51 >More info	wild type		leaf	Original data	GEO bulk
49	WT NAA/flg 2h	0.51 >More info	0.26 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
50	rGRF3x35S:GIF	0.50 >More info	0.27 >More info	Col-0		Apices from 20 day-old plants growth in shortdays	Original data
51	HARAP aerobic	-0.26 >More info	-0.51 >More info	WT aerobic	aerobic		Original data	GEO bulk
52	A. halleri control-leaf	0.21 >More info	0.56 >More info	A. petraea control-leaf			Original data	GEO bulk
53	seedling 6h after Gamma WT	0.51 >More info	0.25 >More info	seedling day 1 unirradiated WT	6h		Original data
54	60m light	-0.24 >More info	-0.50 >More info	before light		whole seedlings	Original data	GEO bulk
55	nhx5-1/nhx6	0.51 >More info	0.22 >More info	WT		Rosette leaf	Original data	GEO bulk
56	wrky72-1-NOCO2 INFECTED	0.51 >More info	0.21 >More info	WT-NOCO2 INFECTED			Original data	GEO bulk
57	rGRF	0.52 >More info	0.20 >More info	Col-0		Apices from 20 day-old plants growth in shortdays	Original data
58	bri1-116	-0.01 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
59	MIL4 ox BTH	0.51 >More info	0.20 >More info	Col BTH			Original data	GEO bulk
60	Red/FR Light45min	0.05 >More info	-0.75 >More info	FarRed Light 45min			Original data	Light treatments
61	Callus	0.15 >More info	0.53 >More info	Control for tissue data		callus	Original data	GEO bulk
62	nhx5	0.54 >More info	0.13 >More info	WT		Rosette leaf	Original data	GEO bulk
63	Rosette leaf No2	0.08 >More info	0.58 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
64	1 h Light Total RNA	-0.12 >More info	-0.53 >More info	1h Dark Total RNA	1 h light control	whole seedlings	Original data	GEO bulk
65	Blue Light 45 min	0.06 >More info	0.59 >More info	White Light 45min			Original data	Light treatments
66	Leaf	0.06 >More info	0.59 >More info	Control for tissue data		leaf	Original data	GEO bulk
67	Stem 1st node	0.08 >More info	0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
68	AAF-OX	0.11 >More info	0.53 >More info	Col-0		Rosette leaf	Original data	GEO bulk
69	Col0-PsmES4326-24hpi	0.03 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
70	Petiol (leaf7)	0.06 >More info	0.58 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
71	nhx5-2/nhx6	0.50 >More info	0.13 >More info	WT		Rosette leaf	Original data	GEO bulk
72	Mature roots	0.10 >More info	0.52 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
73	Distal half (leaf7)	0.03 >More info	0.59 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
74	agb1 +ABA GC	0.09 >More info	0.53 >More info	Col-0 +ABA GC		Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
75	seed germinating in countinuous light 24h SL	-0.05 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
76	Hypocotyl	0.05 >More info	0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
77	Senescing leaf	0.05 >More info	0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
78	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (8 dpg)	0.06 >More info	0.55 >More info	Control for tissue data			Original data	GEO bulk
79	WT NAA 1h	0.54 >More info	0.06 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
80	Root from tip to 130 mm proximal to tip (cut 8dpg)	0.06 >More info	0.54 >More info	Control for tissue data			Original data	GEO bulk
81	Proximalhalf (leaf7)	0.01 >More info	0.59 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
82	Stem 2ndinternode	0.04 >More info	0.54 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
83	GST 4 h (leaf)	0.06 >More info	0.52 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
84	cat2-2; 8h switch to ambient CO2 concentrations;	-0.04 >More info	-0.54 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
85	Cs shoot	0.11 >More info	-0.68 >More info	control shoot			Original data	GEO bulk
86	Cotyledons	-0.01 >More info	0.58 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
87	Shoot apex inflorescence (after bolting)	-0.09 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
88	ms35 silique stage 7	0.04 >More info	0.52 >More info	Ler 6.7		anther and filament	Original data	GEO bulk
89	Cauline leaves	-0.01 >More info	0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
90	cortex	0.02 >More info	0.53 >More info	Control for tissue data		cortex	Original data	GEO bulk
91	seed germinating in countinuous light 12 h SL	0.02 >More info	0.53 >More info	Control for tissue data		seed	Original data	GEO bulk
92	Ambient CO2 fully expanded leaf	-0.01 >More info	0.56 >More info	Control for tissue data		fully expanded leaf	Original data
93	Expanding leaf	-0.03 >More info	0.58 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
94	B5 +AA	0.04 >More info	-0.59 >More info	B5 -AA	B5 media and treated with AA		Original data
95	RPL18 TuMV inoculated total RNA	0.51 >More info	0.03 >More info	mock inoculated total RNA		PO	Original data	GEO bulk
96	seed germinating in countinuous light 6 h SL	0.02 >More info	0.52 >More info	Control for tissue data		seed	Original data	GEO bulk
97	Root from tip to 130 mm proximal to tip (cut 4dpg)	0.01 >More info	0.53 >More info	Control for tissue data			Original data	GEO bulk
98	Shoot apex vegetative	-0.03 >More info	0.57 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
99	Pedicels stage15	-0.03 >More info	0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
100	eds16 whole leaf 7d UI	-0.02 >More info	-0.51 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
101	lateral nectary stage 11-12	-0.03 >More info	0.56 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
102	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg)	-0.02 >More info	0.55 >More info	Control for tissue data			Original data	GEO bulk
103	unpollinated pistil	-0.03 >More info	0.56 >More info	Control for tissue data		pistil	Original data	GEO bulk
104	Shoot apex transition (before bolting)	-0.02 >More info	0.54 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
105	Section Root from70 mm to 340 mm harvested immediately	-0.03 >More info	0.55 >More info	Control for tissue data			Original data	GEO bulk
106	ovule	-0.00 >More info	0.52 >More info	Control for tissue data		ovule	Original data	GEO bulk
107	NAA +AA	0.02 >More info	-0.54 >More info	NAA -AA	B5 media supplemented with 4.5 µM NAA and treated with AA		Original data
108	Shoot apex vegetative &Young leaves	-0.08 >More info	0.59 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
109	lec1-1 Mature Green Seed	-0.03 >More info	0.54 >More info	Control for tissue data			Original data	GEO bulk
110	lec1-1 24h post-fertilization Seed	-0.02 >More info	0.53 >More info	Control for tissue data			Original data	GEO bulk
111	Root wt CLE10	-0.05 >More info	0.56 >More info	Root wt CLE25		root tip	Original data	GEO bulk
112	torpedo-basal	-0.05 >More info	0.56 >More info	Control for tissue data		torpedo embryo basal tissue	Original data	GEO bulk
113	Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)	-0.05 >More info	0.56 >More info	Control for tissue data			Original data	GEO bulk
114	HDG4	0.01 >More info	0.50 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
115	lec1-1 Post-Mature Green Seed	-0.02 >More info	0.52 >More info	Control for tissue data			Original data	GEO bulk
116	IAA7mII over-expressor IAA Treated	-0.19 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
117	globular-apical	-0.05 >More info	0.54 >More info	Control for tissue data		globular embryo apical tissue	Original data	GEO bulk
118	Rosette leaf No12	-0.08 >More info	0.57 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
119	Carpels stage15	-0.06 >More info	0.54 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
120	Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)	-0.06 >More info	0.54 >More info	Control for tissue data			Original data	GEO bulk
121	Ambient CO2 expanding leaf	-0.08 >More info	0.55 >More info	Control for tissue data		expanding leaf	Original data
122	35S:VND7-VP16-GR+CHX	0.28 >More info	-0.75 >More info	harboring empty vector+CHX	10mM cycloheximide (CHX) 6hrs	whole seedlings	Original data	GEO bulk
123	Regenerating Stump Root Tip Cut 130 mm andn Recut 5 hrs Taking 70 mm of Stump (4dpg)	-0.07 >More info	0.52 >More info	Control for tissue data			Original data	GEO bulk
124	Petals stage15	-0.09 >More info	0.53 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
125	siliques AtHb1 control	-0.09 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
126	seed germinating in countinuous light 48 h SL	-0.11 >More info	0.54 >More info	Control for tissue data		seed	Original data	GEO bulk
127	WT cotyledons	-0.11 >More info	0.54 >More info	Control for tissue data		cotyledons	Original data
128	lec1-1 Cotyledon Stage Seed	-0.08 >More info	0.51 >More info	Control for tissue data			Original data	GEO bulk
129	Atape2 low light	-0.07 >More info	0.50 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
130	Flowers stage15	-0.10 >More info	0.52 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
131	heart-stage-cotyledon	-0.10 >More info	0.52 >More info	Control for tissue data			Original data	GEO bulk
132	Ambient CO2 leaf primordia	-0.13 >More info	0.55 >More info	Control for tissue data		leaf primordia	Original data
133	Cells whole embryo	-0.13 >More info	0.55 >More info	Control for tissue data		whole embryo	Original data
134	Apex 14DAS	-0.11 >More info	0.52 >More info	Control for tissue data			Original data	GEO bulk
135	torpedo-meristem	-0.10 >More info	0.51 >More info	Control for tissue data		torpedo embryo meristem tissue	Original data	GEO bulk
136	Nuclei suspensor	-0.13 >More info	0.54 >More info	Control for tissue data		suspensor	Original data
137	heart-stage-root	-0.13 >More info	0.53 >More info	Control for tissue data			Original data	GEO bulk
138	globular-basal	-0.11 >More info	0.50 >More info	Control for tissue data		globular embryo basal tissue	Original data	GEO bulk
139	Sepals stage15	-0.13 >More info	0.51 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
140	Flower (stage12)	-0.13 >More info	0.51 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
141	Emwa1 inoculated psk 3 dpi	-0.16 >More info	0.54 >More info	Emwa1 inoculated WT 3 dpi		Cotyledons	Original data	GEO bulk
142	Nuclei proembryo	-0.15 >More info	0.53 >More info	Control for tissue data		proembryo	Original data
143	Apex 5DAS	-0.17 >More info	0.54 >More info	Control for tissue data			Original data	GEO bulk
144	lateral nectary stage 14-15	-0.14 >More info	0.51 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
145	pskr1-5	-0.15 >More info	0.51 >More info	wild type		Cotyledons	Original data	GEO bulk
146	siliques	-0.16 >More info	0.52 >More info	Control for tissue data			Original data	GEO bulk
147	seedling	-0.19 >More info	0.53 >More info	Control for tissue data		seedling	Original data	GEO bulk
148	median nectary stage 14-15	-0.17 >More info	0.51 >More info	Control for tissue data		median nectaries	Original data	GEO bulk
149	Seeds stage3 with siliques	-0.18 >More info	0.50 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
150	EL (leaves 1-2) 14DAS	-0.22 >More info	0.53 >More info	Control for tissue data			Original data	GEO bulk
151	Inflorescences ler	-0.19 >More info	0.50 >More info	Control for tissue data		inflorescences	Original data	GEO bulk
152	Bud	-0.19 >More info	0.50 >More info	Control for tissue data		pollen grains and tubes	Original data
153	flowers	-0.22 >More info	0.50 >More info	Control for tissue data			Original data	GEO bulk
154	CCA1-ox 6am non-polysomal	-0.23 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data