4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 35S:VND7-VP16-GR+CHX
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List of experiments correlated with "35S:VND7-VP16-GR+CHX"  Help Download transcriptome of top 30
Score Experiment Correlation from
35S:VND7-VP16-GR+CHX		 Correlation to
35S:VND7-VP16-GR+CHX		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 35S:VND7-VP16-GR+CHX 1.00 >More info 1.00 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
2 WT Col-0 Bgh inoculated 0.81 >More info 0.64 >More info WT Col-0 Un-inoculated Original data GEO bulk
3 rao2 H2O2 3h -0.80 >More info -0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
4 rosette Dark Wounded 0.77 >More info 0.55 >More info rosette Dark Control Original data GEO bulk
5 Col0-PsmES4326-24hpi 0.70 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
6 Imidazolinone EC50 0.63 >More info 0.67 >More info Carrier (Imidazolinone) Original data GEO bulk
7 phr1 phl1 Root-Pi 0.69 >More info 0.61 >More info WT Shoot+Pi roots Original data GEO bulk
8 HopZ1a treated 0.73 >More info 0.57 >More info col Original data GEO bulk
9 short 14-degree- 0.71 >More info 0.58 >More info control short Original data GEO bulk
10 col-5 hrpA 12h 0.60 >More info 0.67 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
11 WT flg22 2h 0.60 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
12 short 10-degree- 0.73 >More info 0.53 >More info control short Original data GEO bulk
13 ataf1-1 mutant Col-0 Bgh inoculated 0.63 >More info 0.61 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
14 VND6 12h 0.80 >More info 0.43 >More info wt 12h Original data GEO bulk
15 AvrRpt2 Col-0 6hpi 0.66 >More info 0.57 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
16 hrcC 0.70 >More info 0.53 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
17 WT 24H Cold 0.80 >More info 0.43 >More info WT control Original data GEO bulk
18 Col-Luc WT 3h antimycin A 0.66 >More info 0.56 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
19 DC3000 7h 0.63 >More info 0.59 >More info Mock 7h DC3000 Original data GEO bulk
20 short 8-degree- 0.69 >More info 0.52 >More info control short Original data GEO bulk
21 hrpA 7h 0.58 >More info 0.63 >More info Mock 7h hrpA Original data GEO bulk
22 col-5 DC3000 12h 0.58 >More info 0.63 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
23 anac017-2 AntimycinA 3h -0.58 >More info -0.62 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
24 HopZ1a treated ulp1c ulp1d 0.75 >More info 0.45 >More info col Original data GEO bulk
25 erf104-ko Flg22 4h 0.63 >More info 0.57 >More info erf104-ko H2O 4h Original data GEO bulk
26 35S:RPS4 eds1-2 8h -0.60 >More info -0.60 >More info 35S:RPS4 8h leaves Original data
27 Cold Stress 24 h (shoot) 0.72 >More info 0.47 >More info Stress mock 24 h (shoot) Original data Stress treatments
28 col-5 DC3000-avrRpm 4h 0.63 >More info 0.56 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
29 WT light -0.72 >More info -0.47 >More info WT dark Original data GEO bulk
30 ws 24h4c q8ws 0.75 >More info 0.43 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
31 Wounding Stress3 h (shoot) 0.74 >More info 0.44 >More info Stress mock 3 h (shoot) Original data Stress treatments
32 col-5 hrpA 2h 0.63 >More info 0.54 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
33 col 24h4c set4 0.66 >More info 0.51 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
34 35S::ERF104 Flg22 4h 0.59 >More info 0.58 >More info 35S::ERF104 H2O 4h Original data GEO bulk
35 Cor 10h 0.61 >More info 0.55 >More info Mock 10h Cor Original data GEO bulk
36 DFPM 0.59 >More info 0.57 >More info control Original data GEO bulk
37 Shoot -K 0.71 >More info 0.45 >More info Control-shoot Original data GEO bulk
38 K starvation (shoot) 0.71 >More info 0.45 >More info Ws (shoot) Original data GEO bulk
39 short 12-degree- 0.58 >More info 0.57 >More info control short Original data GEO bulk
40 Shoot -Cs 0.56 >More info 0.59 >More info Control-shoot Original data GEO bulk
41 E.coli 0157 H7 7h 0.54 >More info 0.61 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
42 GST NPP1 4 h (leaf) 0.61 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
43 WT Seedling BL -0.58 >More info -0.57 >More info WT Seedling Dark Original data GEO bulk
44 Sulfometuron EC50 0.54 >More info 0.61 >More info Carrier Original data GEO bulk
45 flu 0.65 >More info 0.49 >More info WT Col Original data GEO bulk
46 Leafminer damaged seedlings 0.58 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
47 ulp1c ulp1d +Pto 0.55 >More info 0.59 >More info ulp1c ulp1d mock Original data GEO bulk
48 efr-1 +elf18 10h -0.54 >More info -0.60 >More info WT +elf18 10h elf18 Original data GEO bulk
49 Laer pretreat GA Flg22 1h 0.43 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
50 Laer pretreat JA Flg22 1h 0.72 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
51 irradiated leaf (WT 1d) 0.69 >More info 0.44 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
52 Col-0-avrB-6h 0.64 >More info 0.49 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
53 Salt Stress 24 h (shoot) 0.74 >More info 0.38 >More info Stress mock 24 h (shoot) Original data Stress treatments
54 Osmotic Stress 24 h (shoot) 0.68 >More info 0.43 >More info Stress mock 24 h (shoot) Original data Stress treatments
55 ABA DFPM 0.66 >More info 0.45 >More info control Original data GEO bulk
56 Fenclorim 4hr 0.71 >More info 0.40 >More info Acetone 4hr root Original data GEO bulk
57 Laer pretreat JA Flg22 2h 0.65 >More info 0.45 >More info Laer pretreat water control leaf discs Original data GEO bulk
58 Col-0 low oxygen 0.48 >More info 0.62 >More info Col-0 Original data GEO bulk
59 WT 24h cold 0.65 >More info 0.44 >More info WT warm 24h cold entire aerial part Original data GEO bulk
60 phr1 Shoot-Pi -0.55 >More info -0.54 >More info WT Root-Pi shoots Original data GEO bulk
61 WT cold 0.64 >More info 0.45 >More info WT control All aerial tissue Original data GEO bulk
62 WT resupplied Pi 4h 0.63 >More info 0.46 >More info WT complete seedlings Original data
63 Laer Flg22 2h 0.54 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
64 Laer pretreat GA+JA Flg22 2h 0.63 >More info 0.46 >More info Laer pretreat water control leaf discs Original data GEO bulk
65 Laer pretreat GA+JA Flg22 0h 0.69 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
66 35S:VND7-VP16-GR+DEX +CHX 0.49 >More info 0.60 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
67 Phaseolicola 2 h (leaf) 0.53 >More info 0.55 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
68 seedlings protease IV 0.59 >More info 0.49 >More info seedlings nontreated control whole seedling Original data
69 WT no Pi 0.64 >More info 0.44 >More info WT complete seedlings Original data
70 Seedling KUA1-IOX est 0.34 >More info 0.74 >More info Seedling KUA1-IOX mock Original data
71 wrky33 Bc inoculation 14h 0.70 >More info 0.37 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
72 flu over-tAPX 0.58 >More info 0.49 >More info WT Col Original data GEO bulk
73 Laer Flg22 1h 0.62 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
74 cop1 Seedling Dark -0.50 >More info -0.56 >More info WT Seedling Dark Original data GEO bulk
75 low water potential 0.76 >More info 0.30 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
76 short 17-degree- 0.52 >More info 0.54 >More info control short Original data GEO bulk
77 Col-0 drought 0.73 >More info 0.33 >More info Col-0 control Original data GEO bulk
78 PAHs stress 0.62 >More info 0.44 >More info exp control phenanthrene whole plants Original data GEO bulk
79 Mutant arf19-1 0.48 >More info 0.58 >More info Col Original data GEO bulk
80 DC3000 2 h (leaf) 0.64 >More info 0.41 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
81 Glyphosate EC50 0.63 >More info 0.42 >More info Carrier (Glyphosate) Original data GEO bulk
82 mpk6-ko Flg22 4h 0.51 >More info 0.54 >More info mpk6-ko H2O 4h Original data GEO bulk
83 E.coli TUV86 2 fliC 7h 0.43 >More info 0.62 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
84 Leafminer locally damaged thaliana seedlings 0.58 >More info 0.47 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
85 Primisulfuron EC50 0.47 >More info 0.58 >More info Carrier (primisulfuron) Original data GEO bulk
86 Fenclorim 24hr 0.75 >More info 0.29 >More info Acetone 24hr root Original data GEO bulk
87 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.69 >More info 0.35 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
88 WT-SA 0.59 >More info 0.45 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
89 Laer pretreat GA+JA Flg22 1h 0.64 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
90 ein2-1 9 hpi A. brassicicola 0.57 >More info 0.46 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
91 Laer Flg22+GA 2h 0.52 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
92 camta1/2 warm -0.68 >More info -0.35 >More info WT 24h cold entire aerial part Original data GEO bulk
93 Col-0 ozone 0.69 >More info 0.34 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
94 leaf13 0.63 >More info 0.40 >More info unwounded leaves none Original data GEO bulk
95 pif4pif5 mut dark -0.29 >More info -0.74 >More info WT dark Original data GEO bulk
96 35S:RPS4 eds1-2 24h -0.50 >More info -0.52 >More info 35S:RPS4 24h leaves Original data
97 fls1-3 0.51 >More info 0.51 >More info Col-0 Rosette leaves Original data
98 Laer Flg22+GA 1h 0.54 >More info 0.48 >More info Laer Control leaf discs Original data GEO bulk
99 WT Rc50 -0.66 >More info -0.36 >More info WT Dark red light whole seedling Original data GEO bulk
100 D2O 0.68 >More info 0.34 >More info H2O seedling Original data GEO bulk
101 VND7XVE 0.64 >More info 0.38 >More info VND7XVE Control cycloheximide+estradiol Original data GEO bulk
102 WT(Ler) Rc50 -0.64 >More info -0.38 >More info WT(Ler) Dark Original data GEO bulk
103 atmyc2 cop1 Seedling Dark -0.59 >More info -0.42 >More info WT Seedling Dark Original data GEO bulk
104 dor drought 0.60 >More info 0.41 >More info WT drought Original data GEO bulk
105 Norflurazon 0.33 >More info 0.68 >More info Col-0 Original data GEO bulk
106 IAA7mII over-expressor IAA Treated 0.32 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
107 Norflurazon 0.33 >More info 0.68 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
108 penta Pst DC3000 12hpi 0.61 >More info 0.39 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
109 Botrytis cinerea 48h 0.56 >More info 0.44 >More info control 48h Original data GEO bulk
110 ape2 high light -0.58 >More info -0.42 >More info Ws-2 high light Original data GEO bulk
111 Col-0 9 hpi A. brassicicola 0.53 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
112 low R/FR SA 0.51 >More info 0.49 >More info low R/FR low R/FR SA spray Original data GEO bulk
113 AFB1 flg22 1h 0.54 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
114 Leaf GLU1-KO 0.50 >More info 0.49 >More info Leaf Col(0) rosette leaves Original data GEO bulk
115 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.63 >More info 0.36 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
116 WT in -N 0.52 >More info 0.47 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
117 hrpA fliC 7h 0.53 >More info 0.46 >More info Mock 7h hrpA fliC Original data GEO bulk
118 Differentiation 48h 0.68 >More info 0.31 >More info Differentiation 0h leaves Original data
119 CMP 24hr 0.60 >More info 0.39 >More info Acetone 24hr root Original data GEO bulk
120 elf3-7-23ºC 0.58 >More info 0.41 >More info WT-23ºC Original data GEO bulk
121 albino Ds13-2198-1 -0.45 >More info -0.54 >More info control Original data GEO bulk
122 seedling 24h after HZE WT 0.62 >More info 0.36 >More info seedling day 2 unirradiated WT 24h Original data
123 root hypoxia pGL2 -0.74 >More info -0.24 >More info root hypoxia total hypoxia root Original data GEO bulk
124 Pto inoculated 0.68 >More info 0.30 >More info col Original data GEO bulk
125 Heat no recovery 0.67 >More info 0.31 >More info Mock no recovery seedling Original data GEO bulk
126 WT NAA 2h -0.70 >More info -0.28 >More info WT 0h Leaf tissue Original data GEO bulk
127 Differentiation 12h 0.43 >More info 0.55 >More info Differentiation 0h leaves Original data
128 WT 90-105 min Xanthomonas 0.68 >More info 0.29 >More info WT T0 Original data GEO bulk
129 coi1-16 ein2 sid2 ctrl -0.63 >More info -0.34 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
130 +1.6 mM Tween 20 1 h. 0.46 >More info 0.51 >More info +distilled water 1 h. Original data GEO bulk
131 SND1XVE 0.68 >More info 0.28 >More info SND1XVE Control cycloheximide+estradiol Original data GEO bulk
132 Col ozone 2d 0.52 >More info 0.44 >More info Col clean-air 2d ozone Original data GEO bulk
133 miR393 0h -0.58 >More info -0.38 >More info WT 0h Leaf tissue Original data GEO bulk
134 Cd 24h root -0.54 >More info -0.42 >More info WT-Untreated Shoot Original data GEO bulk
135 nia1nia2 0.55 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
136 penta Alternaria 3dpi 0.52 >More info 0.44 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
137 Flagellin 4 h (leaf) 0.44 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
138 sid2-1 cold -0.45 >More info -0.51 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
139 Col-7 Sucrose 0.55 >More info 0.40 >More info col-7 Original data GEO bulk
140 col-5 hrpA 4h 0.53 >More info 0.42 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
141 seedling 3h after Gamma WT 0.50 >More info 0.45 >More info seedling day 1 unirradiated WT 3h Original data
142 rosette Light Wounded 0.60 >More info 0.35 >More info rosette Light Control Original data GEO bulk
143 35:SUB1A 0.60 >More info 0.35 >More info WT whole seedling Original data GEO bulk
144 WT cold 12 h 0.54 >More info 0.41 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
145 gai Flg22 2h -0.75 >More info -0.20 >More info Laer Flg22 2h leaf discs Original data GEO bulk
146 phyB Dark -0.60 >More info -0.35 >More info WT(Ler) Dark Original data GEO bulk
147 Differentiation 36h 0.66 >More info 0.28 >More info Differentiation 0h leaves Original data
148 C58 35dpi 0.66 >More info 0.28 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
149 Cor hrpS 10h 0.40 >More info 0.54 >More info Mock 10h Cor hrpS Original data GEO bulk
150 CT101 ozone 0.64 >More info 0.30 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
151 B.cinerea 18 h infection 0.61 >More info 0.33 >More info Mock 18 h Original data Botrytis cinerea infection
152 Botrytis cinerea 18h 0.61 >More info 0.33 >More info control 18h Original data GEO bulk
153 Dex-rga(delta17) 4h GA4+DEX -0.41 >More info -0.53 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
154 35S::PI ap3-3 35S::AP-GR +DEX 0.43 >More info 0.51 >More info 0hr DEX Original data GEO bulk
155 WT-elf18 0.53 >More info 0.40 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
156 ein3 eil1 0.67 >More info 0.26 >More info Col-0 mock Whole seedling Original data GEO bulk
157 WT mitomycin C 0.55 >More info 0.38 >More info WT mock shoot apical meristem Original data
158 Triazolopyrimidine EC50 0.39 >More info 0.54 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
159 sicy-192 cotyledons 0.40 >More info 0.53 >More info WT cotyledons cotyledons Original data
160 max3GR24 (1 uM) 0.51 >More info 0.42 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
161 rrd1 IBA 0.72 >More info 0.21 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
162 Root dark control 24h -0.71 >More info -0.22 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
163 root - 04% oxygen - 2h -0.62 >More info -0.31 >More info root - 21% oxygen - 2h Original data GEO bulk
164 Emwa1 inoculated psk 3 dpi -0.62 >More info -0.31 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
165 WT 2-4h Xanthomonas 0.52 >More info 0.40 >More info WT T0 Original data GEO bulk
166 Rosette leaf No12 -0.64 >More info -0.28 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
167 root control pSultr2:2 -0.68 >More info -0.24 >More info root control total control root Original data GEO bulk
168 Differentiation 24h 0.53 >More info 0.39 >More info Differentiation 0h leaves Original data
169 35:SUB1C 0.69 >More info 0.23 >More info WT whole seedling Original data GEO bulk
170 ML (Mature leaves) 35DAS -0.62 >More info -0.30 >More info Control for tissue data Original data GEO bulk
171 Methyl Violet 0.5 uM -0.59 >More info -0.33 >More info Control MV and IC Methyl Violet Original data
172 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.51 >More info -0.40 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
173 gai MeJA 1h -0.64 >More info -0.27 >More info Laer MeJA 1h leaf discs Original data GEO bulk
174 Root dark control 7h -0.66 >More info -0.25 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
175 WT(Ler) Rc15 -0.56 >More info -0.35 >More info WT(Ler) Dark Original data GEO bulk
176 EL (leaves 1-2) 14DAS -0.63 >More info -0.28 >More info Control for tissue data Original data GEO bulk
177 Root submergence 24h -0.76 >More info -0.15 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
178 lht1 PstDC3000 48h 0.52 >More info 0.39 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
179 phyAphyB Dark 0.55 >More info 0.36 >More info phyB Dark Original data GEO bulk
180 Ambient CO2 expanding leaf -0.63 >More info -0.28 >More info Control for tissue data expanding leaf Original data
181 Laer treat paclobutrazol (PAC) 0.35 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
182 rosettes WT drought 0.59 >More info 0.32 >More info rosettes WT watered Original data GEO bulk
183 Expanding leaf -0.59 >More info -0.32 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
184 elf3-7-16ºC 0.60 >More info 0.31 >More info WT-16ºC Original data GEO bulk
185 AtMYB30-ox 2-4h Xanthomonas 0.50 >More info 0.40 >More info WT 2-4h Xanthomonas Original data GEO bulk
186 HSP90 Reduced RNAi-A3 0.66 >More info 0.24 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
187 Te ozone 0.55 >More info 0.35 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
188 3d old, both 10mM sucrose and 0.2µM SMX 0.53 >More info 0.37 >More info control Whole seedling Original data GEO bulk
189 Whole root - S 3H 0.53 >More info 0.37 >More info Whole root - S 0H Original data GEO bulk
190 nia1nia2noa1-2 0.52 >More info 0.38 >More info Col-0 whole seedlings Original data GEO bulk
191 Ambient CO2 fully expanded leaf -0.62 >More info -0.28 >More info Control for tissue data fully expanded leaf Original data
192 4C 24h 0.38 >More info 0.52 >More info 4C 0h Original data GEO bulk
193 Leaf -0.60 >More info -0.30 >More info Control for tissue data leaf Original data GEO bulk
194 WT Bc inoculation 14h 0.57 >More info 0.33 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
195 Stigma 0.75 >More info 0.14 >More info Seedling Original data GEO bulk
196 sid2-2 9 hpi A. brassicicola 0.54 >More info 0.35 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
197 ANOXIA -0.66 >More info -0.23 >More info ANOXIA+SUCROSE Original data GEO bulk
198 Cotyledons -0.60 >More info -0.29 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
199 leaf -0.59 >More info -0.30 >More info Control for tissue data leaf Original data GEO bulk
200 Rsch 1d 0.59 >More info 0.30 >More info Rsch CA Leaves Original data
201 pskr1-5 -0.58 >More info -0.31 >More info wild type Cotyledons Original data GEO bulk
202 root cells cortex 140mM NaCl 1 hour -0.56 >More info -0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
203 TAMM27 roots 2hr KCl control -0.56 >More info -0.32 >More info Col0 roots 2hr KCl control root Original data GEO bulk
204 amiR-tor induced 6d 0.56 >More info 0.32 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
205 Atss3 Light4 -0.53 >More info -0.35 >More info Atss3 Dark0.5 Original data GEO bulk
206 Distal half (leaf7) -0.61 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
207 Proximalhalf (leaf7) -0.61 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
208 C2 leaf-drought 0.66 >More info 0.22 >More info C2 leaf-well watered Original data GEO bulk
209 seedling 24h after Gamma WT 0.61 >More info 0.27 >More info seedling day 2 unirradiated WT 24h Original data
210 safener treated 0.53 >More info 0.35 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
211 Root submergence 7h -0.72 >More info -0.16 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
212 Cauline leaves -0.61 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
213 CMP 4hr 0.57 >More info 0.31 >More info Acetone 4hr root Original data GEO bulk
214 tumour 0.57 >More info 0.31 >More info non-tumor tumour Original data GEO bulk
215 gun1gun5 far-red pretreated -0.56 >More info -0.31 >More info WT far-red pretreated Original data GEO bulk
216 Laer pretreat JA Flg22 0h 0.66 >More info 0.21 >More info Laer pretreat water control leaf discs Original data GEO bulk
217 Rosette leaf No2 -0.61 >More info -0.26 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
218 Apex 14DAS -0.60 >More info -0.27 >More info Control for tissue data Original data GEO bulk
219 miR393 flg22 2h 0.22 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
220 Col whole leaf 7dpi 0.34 >More info 0.52 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
221 coi1-16 ein2 sid2 ozone 0.58 >More info 0.28 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
222 12h-DC3000 avrRpm1 0.28 >More info 0.58 >More info 12h-DC3000 leaves Original data GEO bulk
223 tor mutant 0.56 >More info 0.29 >More info WT (Col) none seedlings Original data GEO bulk
224 roots bhlh100/101 100uM Fe 0.51 >More info 0.34 >More info roots WT 100uM Fe 100uM Fe roots Original data GEO bulk
225 WT leaf-drought 0.58 >More info 0.27 >More info WT leaf-well watered Original data GEO bulk
226 Pedicels stage15 -0.58 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
227 Col-0-3h IAA 0.64 >More info 0.21 >More info Col-0-0h IAA whole plant Original data GEO bulk
228 MYB46-GR DEX 0.27 >More info 0.58 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
229 Apex 5DAS -0.55 >More info -0.29 >More info Control for tissue data Original data GEO bulk
230 WT Shoot-Pi 0.66 >More info 0.18 >More info WT Shoot+Pi shoots Original data GEO bulk
231 10mM sucrose 0.51 >More info 0.33 >More info control Whole seedling Original data GEO bulk
232 Ambient CO2 leaf primordia -0.63 >More info -0.21 >More info Control for tissue data leaf primordia Original data
233 T8 leaf-drought 0.58 >More info 0.26 >More info T8 leaf-well watered Original data GEO bulk
234 WT cotyledons -0.57 >More info -0.27 >More info Control for tissue data cotyledons Original data
235 PNO8 12 h -0.21 >More info -0.63 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
236 ice1 control 0.24 >More info 0.60 >More info WT control Original data GEO bulk
237 aerial organ callus inducing medium 96 h 0.27 >More info 0.56 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
238 rosettes drought 0.60 >More info 0.23 >More info rosettes watered Original data GEO bulk
239 Shoot apex vegetative &Young leaves -0.60 >More info -0.23 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
240 seedling -0.58 >More info -0.25 >More info Control for tissue data seedling Original data GEO bulk
241 WT salt 12 h 0.69 >More info 0.14 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
242 root control pGL2 -0.59 >More info -0.24 >More info root control total control root Original data GEO bulk
243 AFB1 flg22 2h 0.23 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
244 root longitudinal zone-3 -Fe 0.67 >More info 0.15 >More info root longitudinal zone-3 standard Original data GEO bulk
245 35S:RPS4 rrs1-11 24h -0.63 >More info -0.19 >More info 35S:RPS4 24h leaves Original data
246 IRP1-OE-Ctrl--shoot 0.61 >More info 0.20 >More info COL-0-Ctrl--shoot shoot Original data
247 B5 +AA 0.58 >More info 0.23 >More info B5 -AA B5 media and treated with AA Original data
248 Col 0 2h KNO3 0.57 >More info 0.24 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
249 lec1-1 12 DAF Seed -0.55 >More info -0.25 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
250 Petiol (leaf7) -0.56 >More info -0.24 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
251 plant (tga2-5-6) 4h OPDA 0.52 >More info 0.28 >More info plant (tga2-5-6) 4h control Original data GEO bulk
252 light -0.62 >More info -0.18 >More info dark light seedling Original data GEO bulk
253 Salicylic Acid 3 h 0.62 >More info 0.18 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
254 Shoot apex transition (before bolting) -0.60 >More info -0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
255 Col-0 +ABA LF 0.65 >More info 0.14 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
256 essp4/sdg8-5 mutant 0.56 >More info 0.23 >More info wild type leaf Original data GEO bulk
257 aln-1 0.68 >More info 0.11 >More info Col-0 Aerial part of seedlings Original data
258 Col 1d 0.54 >More info 0.25 >More info Col CA Leaves Original data
259 siliques -0.55 >More info -0.24 >More info Control for tissue data Original data GEO bulk
260 SLWF infested 0.28 >More info 0.51 >More info SLWF uninfested rosette tissue Original data GEO bulk
261 cdm1 mutant floral young floral buds 0.61 >More info 0.17 >More info WT floral yound floral buds Unopen flower buds Original data
262 unpollinated pistil -0.54 >More info -0.24 >More info Control for tissue data pistil Original data GEO bulk
263 SCR-GR Time 6H Dex 0.63 >More info 0.15 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
264 abi3-6 16 DAF Seed -0.53 >More info -0.25 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
265 root longitudinal zone-3 low sulfur -0.68 >More info -0.09 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
266 lec1-1 24h post-fertilization Seed -0.59 >More info -0.18 >More info Control for tissue data Original data GEO bulk
267 Flowers stage15 -0.52 >More info -0.25 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
268 root protoplasts 40 mM NaCl 0.67 >More info 0.10 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
269 Col-0-1h IAA 0.53 >More info 0.24 >More info Col-0-0h IAA whole plant Original data GEO bulk
270 Seeds stage3 with siliques -0.53 >More info -0.24 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
271 Bay-0-1h IAA -0.63 >More info -0.14 >More info Bay-0-0h IAA whole plant Original data GEO bulk
272 fis1X2x fis1 mutant cross -0.62 >More info -0.15 >More info 2xX2x cross Original data GEO bulk
273 root callus inducing medium 96 h -0.61 >More info -0.16 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
274 SAB 0.55 >More info 0.22 >More info COL seedling Original data
275 Mutant axr3-1 (IAA) -0.54 >More info -0.22 >More info Col (IAA) Original data GEO bulk
276 Night Time Treatment 0.66 >More info 0.10 >More info Night Time Control 1hr white light pulse aerial rosette Original data
277 fri-flc 0.56 >More info 0.20 >More info WT Original data GEO bulk
278 cop1 Seedling BL+ABA 0.52 >More info 0.24 >More info WT Seedling BL+ABA Original data GEO bulk
279 Heat shock optimum 0.11 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
280 sta1 0.26 >More info 0.50 >More info WT Original data GEO bulk
281 lec1-1 Cotyledon Stage Seed -0.56 >More info -0.19 >More info Control for tissue data Original data GEO bulk
282 Flower (stage12) -0.52 >More info -0.23 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
283 cngc4 -0.53 >More info -0.22 >More info Ws-2 Seedlings Original data GEO bulk
284 Col-0 root drought 0.53 >More info 0.21 >More info Col-0 root water root Original data GEO bulk
285 upb1-1 elongation zone 0.55 >More info 0.19 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
286 lateral nectary stage 11-12 -0.57 >More info -0.17 >More info Control for tissue data lateral nectaries Original data GEO bulk
287 GR-REV 30min -0.60 >More info -0.14 >More info Col 30min Original data GEO bulk
288 Col leaf scrape 5 dpi 0.54 >More info 0.20 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
289 rsa1 salt 12 h -0.58 >More info -0.16 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
290 GR:KAN1 DEX WL 0.55 >More info 0.19 >More info GR:KAN1 Mock WL seedlings Original data
291 lec1-1 Post-Mature Green Seed -0.58 >More info -0.16 >More info Control for tissue data Original data GEO bulk
292 tt4 UV 0.68 >More info 0.06 >More info UV aerial region Original data GEO bulk
293 Shoot apex vegetative -0.55 >More info -0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
294 embryo proper -0.60 >More info -0.14 >More info Control for tissue data Original data GEO bulk
295 leaf chr11-1chr17-1 0.64 >More info 0.10 >More info leaf Col-0 leaves Original data GEO bulk
296 ckh2 CK0 -0.61 >More info -0.12 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
297 Nuclei suspensor -0.59 >More info -0.14 >More info Control for tissue data suspensor Original data
298 SIZ 0.55 >More info 0.18 >More info COL seedling Original data
299 ein2-1 +elf18 2h 0.50 >More info 0.23 >More info WT +elf18 2h elf18 Original data GEO bulk
300 HRE1-RNAi20 hypoxia 6 hrs 0.54 >More info 0.19 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
301 whole seeds mature green -0.53 >More info -0.20 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
302 pad4-PsmES4326-24hpi -0.20 >More info -0.53 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
303 apum23 0.23 >More info 0.50 >More info WT (Col-3) aerial parts Original data GEO bulk
304 Col-0-30min IAA 0.56 >More info 0.16 >More info Col-0-0h IAA whole plant Original data GEO bulk
305 torpedo-meristem -0.53 >More info -0.19 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
306 SCR-GR Time 12H Dex 0.62 >More info 0.10 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
307 AZC 0.50 >More info 0.22 >More info noneHS Original data GEO bulk
308 seed germinating in countinuous light 48 h SL -0.52 >More info -0.20 >More info Control for tissue data seed Original data GEO bulk
309 lec1-1 Mature Green Seed -0.57 >More info -0.15 >More info Control for tissue data Original data GEO bulk
310 ago4-1 0.61 >More info 0.11 >More info WT La-er whole plants Original data GEO bulk
311 toc1-1-89hr -0.50 >More info -0.22 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
312 naxillin 3h 0.53 >More info 0.19 >More info before treatment naxillin root Original data GEO bulk
313 SA 4mM 0.63 >More info 0.09 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
314 eds16 whole leaf 5dpi -0.21 >More info -0.51 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
315 embryo proper mature green -0.55 >More info -0.16 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
316 ein2-1 +elf18 10h 0.55 >More info 0.16 >More info WT +elf18 10h elf18 Original data GEO bulk
317 SND1 12h 0.71 >More info 0.00 >More info wt 12h Original data GEO bulk
318 Nuclei proembryo -0.59 >More info -0.12 >More info Control for tissue data proembryo Original data
319 frb1 mutant 0.21 >More info 0.50 >More info WT whole seedling Original data GEO bulk
320 npr1 sni1 ssn2 0.55 >More info 0.15 >More info npr1 sni1 water water seedling Original data GEO bulk
321 ein3 eil1 JA 0.67 >More info 0.03 >More info JA Whole seedling Original data GEO bulk
322 seedling 1.5h after Gamma atm-1 0.55 >More info 0.15 >More info seedling day 1 unirradiated atm-1 1.5h Original data
323 S17 -0.55 >More info -0.15 >More info Control for tissue data shoot apical meristem Original data GEO bulk
324 SHR-GR Time 1H Dex 0.63 >More info 0.07 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
325 35S::RSL4 0.50 >More info 0.20 >More info Col-0 Control root Original data GEO bulk
326 WT 6H Cold 0.58 >More info 0.12 >More info WT control Original data GEO bulk
327 GR-REV 60min -0.50 >More info -0.20 >More info Col 60min Original data GEO bulk
328 Col-0 low R/FR 0.55 >More info 0.14 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
329 AtLysM RLK1 mutant chitooctaose -0.56 >More info -0.13 >More info WT chitooctaose Original data GEO bulk
330 seed germinating in countinuous light 12 h SL -0.55 >More info -0.14 >More info Control for tissue data seed Original data GEO bulk
331 0.5h pollen tube 0.16 >More info 0.53 >More info drypollen in vitro-grown pollen tubes Original data GEO bulk
332 pif5 low R/FR -0.51 >More info -0.18 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
333 aox1a:rpoTmp MLD stressed -0.74 >More info 0.05 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
334 KAN1-GR 60min 0.50 >More info 0.19 >More info KAN1-GR 0min Original data GEO bulk
335 WT (Ler) TSA 0.60 >More info 0.09 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
336 Red/FR Light45min 0.50 >More info 0.19 >More info FarRed Light 45min Original data Light treatments
337 ein2 mutant roots IAA 0.61 >More info 0.08 >More info roots ethylene Original data GEO bulk
338 OsSAP11 expressing -0.58 >More info -0.11 >More info WT seedlings Original data GEO bulk
339 Sha-30min IAA -0.58 >More info -0.11 >More info Sha-0h IAA whole plant Original data GEO bulk
340 gh3.5D uninoculated -0.51 >More info -0.18 >More info Col-0 48 hpi Original data GEO bulk
341 bZIP1ko mutant N+Light+ 0.55 >More info 0.13 >More info WT-sib N+Light+ whole plant Original data GEO bulk
342 gai Flg22 1h -0.53 >More info -0.15 >More info Laer Flg22 1h leaf discs Original data GEO bulk
343 eif3h 0.50 >More info 0.18 >More info WT Original data GEO bulk
344 root stele 40 mM NaCls 0.61 >More info 0.07 >More info root stele Original data GEO bulk
345 heart-stage-cotyledon -0.50 >More info -0.18 >More info Control for tissue data Original data GEO bulk
346 35SAvr 0.18 >More info 0.50 >More info Ecotype Col Original data GEO bulk
347 Inflorescence ngaquad 0.55 >More info 0.12 >More info Inflorescence wt Original data GEO bulk
348 opr3 OPDA 2 h -0.52 >More info -0.15 >More info opr3 0 h Original data GEO bulk
349 chalazal endosperm pre-globular 0.63 >More info 0.04 >More info whole seed sections pre-globular Original data GEO bulk
350 NAA +AA 0.51 >More info 0.16 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
351 torpedo-basal -0.53 >More info -0.14 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
352 ice1 6H Cold 0.13 >More info 0.54 >More info WT 6H Cold Original data GEO bulk
353 ovule -0.51 >More info -0.15 >More info Control for tissue data ovule Original data GEO bulk
354 rdr1-1 0.55 >More info 0.11 >More info Col-0 Original data GEO bulk
355 penta MeJA 1h 0.50 >More info 0.16 >More info Laer MeJA 1h leaf discs Original data GEO bulk
356 ddm1-2 rdr6-15 -0.53 >More info -0.13 >More info Col-0 plant inflorescence Original data
357 WT zebularine 0.51 >More info 0.15 >More info WT mock shoot apical meristem Original data
358 globular-apical -0.52 >More info -0.14 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
359 ein2 1% sucrose 14-day-old 0.53 >More info 0.13 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
360 expressing C2 MeJA -0.50 >More info -0.16 >More info LUC2T Original data GEO bulk
361 rcf1-1 cold 0h 0.16 >More info 0.50 >More info WT cold 0h Control seedlings Original data GEO bulk
362 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 -0.60 >More info -0.06 >More info Control for tissue data Original data GEO bulk
363 wnk8-2 untreated -0.58 >More info -0.08 >More info Col-0 untreated seedlings Original data GEO bulk
364 dcl2-1 0.51 >More info 0.14 >More info Col-0 Original data GEO bulk
365 GRX-overexpression seedlings control 0.51 >More info 0.14 >More info WT seedlings control Seedlings Original data GEO bulk
366 Indigo Carmine 0.5 uM -0.51 >More info -0.14 >More info Control MV and IC Indigo Carmine Original data
367 root control pSUC2 -0.56 >More info -0.09 >More info root control total control root Original data GEO bulk
368 Chitosan 3h Treatment 0.63 >More info 0.02 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
369 Col leaves 48h LT 0.15 >More info 0.50 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
370 WT (Col-0) inflorescence moderate drought day 10 0.50 >More info 0.14 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
371 lec1-1 Globular Stage Seed -0.50 >More info -0.14 >More info Control for tissue data Original data GEO bulk
372 root columella root cap 40 mM NaCl 0.59 >More info 0.05 >More info root columella root cap Original data GEO bulk
373 CDB1-Knockout -0.63 >More info -0.01 >More info WT Original data GEO bulk
374 seed coat heart stage -0.53 >More info -0.11 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
375 Cells whole embryo -0.52 >More info -0.12 >More info Control for tissue data whole embryo Original data
376 sdg8-2 mutant 0.52 >More info 0.12 >More info wild type leaf Original data GEO bulk
377 wnk8-1 untreated -0.52 >More info -0.12 >More info Col-0 untreated seedlings Original data GEO bulk
378 embryo proper heart stage -0.63 >More info -0.01 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
379 C58 3hpi -0.57 >More info -0.07 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
380 AtLysM RLK1 mutant water -0.51 >More info -0.12 >More info WT water Original data GEO bulk
381 whole seeds -0.54 >More info -0.09 >More info Control for tissue data Original data GEO bulk
382 hen1 0.50 >More info 0.13 >More info Ler Original data GEO bulk
383 root cells columella root cap -Fe 0.55 >More info 0.08 >More info whole roots standard Original data GEO bulk
384 Starch sheath 2 days NAA -0.61 >More info -0.02 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
385 R. sylvestris submerged -0.52 >More info -0.11 >More info R. sylvestris air Original data GEO bulk
386 oxt6:AtCPSF30 line -0.56 >More info -0.06 >More info oxt6 mutant Original data GEO bulk
387 Col light-light EtOH 0.55 >More info 0.07 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
388 4C 2h(SOIL) 0.51 >More info 0.11 >More info 4C 0h(SOIL) Original data GEO bulk
389 whole seeds heart stage -0.50 >More info -0.12 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
390 pollinated pop2-1 flowers -0.50 >More info -0.12 >More info pollinated WT flowers flowers Original data GEO bulk
391 Section Root from70 mm to 340 mm harvested
immediately		 -0.53 >More info -0.09 >More info Control for tissue data Original data GEO bulk
392 stele auxin -0.52 >More info -0.10 >More info stele control 5 uM indole-3-acetic acid stele Original data GEO bulk
393 tga1 tga4 2h KCl 0.54 >More info 0.07 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
394 WT polysome 0.54 >More info 0.07 >More info WT non-polysome Original data GEO bulk
395 lec2-1 12 DAF Seed -0.65 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
396 anac017-2 H2O2 3h -0.51 >More info -0.10 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
397 root longitudinal zone-4 low sulfur -0.63 >More info 0.02 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
398 chalazal seed coat mature green -0.53 >More info -0.07 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
399 ABA 3 h 0.53 >More info 0.07 >More info Mock 3 h Original data Basic hormone treatment of seedlings
400 chalazal seed coat -0.54 >More info -0.06 >More info Control for tissue data Original data GEO bulk
401 LAS -0.51 >More info -0.09 >More info Control for tissue data shoot apical meristem Original data GEO bulk
402 phr1 phl1 Shoot-Pi -0.61 >More info 0.01 >More info WT Shoot-Pi shoots Original data GEO bulk
403 brm-1 0.59 >More info 0.01 >More info wt shoots Original data GEO bulk
404 phyABDE 4-day dark- 2 hours Rc50 0.57 >More info 0.03 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
405 HMG -0.50 >More info -0.10 >More info Control for tissue data shoot apical meristem Original data GEO bulk
406 bbx24 in With Light 0.01 >More info 0.59 >More info WT in With Light light seedling Original data
407 Van 0.54 >More info 0.05 >More info Col-0 Original data GEO bulk
408 QC pSCR 0h BL -0.53 >More info -0.06 >More info WR 35S 0h BL brassinosteroid root Original data
409 erf115ko roottip5days 0.64 >More info -0.05 >More info Col-0 roottip5days root tips Original data
410 Cold Stress 24 h (root) 0.59 >More info 0.00 >More info Stress mock 24 h (root) Original data Stress treatments
411 Starch sheath 5 days MS incubation -0.53 >More info -0.05 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
412 15m.KNO3 -0.66 >More info 0.08 >More info To. KNO3 14 day old Roots Original data GEO bulk
413 HDG4 -0.51 >More info -0.07 >More info Control for tissue data shoot apical meristem Original data GEO bulk
414 AGL24 induced 0.57 >More info 0.01 >More info WT-ESTRADIOL Original data GEO bulk
415 Dark 6h hml -0.60 >More info 0.02 >More info 0h hml Original data
416 Atss3 Dark4 -0.50 >More info -0.08 >More info Atss3 Dark0.5 Original data GEO bulk
417 agb1 -ABA GC -0.03 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
418 root BA 12h 0.54 >More info 0.02 >More info root control 12h boron (5mM) root Original data GEO bulk
419 rosettes atx drought 0.51 >More info 0.05 >More info rosettes atx watered Original data GEO bulk
420 gpa1-4/agb1-2 ozone 2d -0.54 >More info -0.02 >More info Col ozone 2d ozone Original data GEO bulk
421 oas-a1.1 root 0.50 >More info 0.06 >More info WT-Untreated Root Original data GEO bulk
422 Callus -0.52 >More info -0.03 >More info Control for tissue data callus Original data GEO bulk
423 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 -0.51 >More info -0.04 >More info Control for tissue data Original data GEO bulk
424 Root from tip to 130 mm proximal to tip (cut
4dpg)		 -0.52 >More info -0.03 >More info Control for tissue data Original data GEO bulk
425 GV3101 6dpi -0.54 >More info -0.01 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
426 GR-REV 120min -0.55 >More info 0.00 >More info Col 120min Original data GEO bulk
427 root stele -S -0.62 >More info 0.07 >More info root stele pH5.7 Original data GEO bulk
428 Homozygous-AtcesA4 0.52 >More info 0.03 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
429 etiolated cop1 -0.59 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
430 tcp13 -0.55 >More info 0.01 >More info WT inflorescences Original data GEO bulk
431 vte2 leaves 120h LT 0.50 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
432 wrky33 mock 0.54 >More info -0.00 >More info WT mock 14 hour mock control leaves Original data
433 2hr transitory KNO3 ECR cell -0.10 >More info 0.64 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
434 ERF115OE roottip5days 0.57 >More info -0.03 >More info Col-0 roottip5days root tips Original data
435 35S::HRE2 Hypoxic -0.52 >More info -0.01 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
436 ahg2-1abi1-1 -0.52 >More info -0.01 >More info WT (Col) control Original data GEO bulk
437 Root from tip to 130 mm proximal to tip (cut
8dpg)		 -0.50 >More info -0.03 >More info Control for tissue data Original data GEO bulk
438 TNT-seedlings 0.50 >More info 0.03 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
439 rsl4 0.60 >More info -0.08 >More info Col-0 Control root Original data GEO bulk
440 mil4 sid2 -0.51 >More info 0.00 >More info Col rosettes Original data GEO bulk
441 myb triple mutant 8h-pollinated ms1 -0.55 >More info 0.04 >More info WT 8h-pollinated pistil Original data GEO bulk
442 WT (Ler) CK200 0.62 >More info -0.11 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
443 Starch sheath 2 days MS incubation -0.51 >More info 0.01 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
444 2hr continuous KNO3 ECR cell -0.00 >More info 0.50 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
445 hira-protoplast -0.62 >More info 0.13 >More info WT-protoplast protoplast Original data
446 Dark 1day wt -0.55 >More info 0.07 >More info 0h wt Original data
447 Nuclei whole embryo -0.58 >More info 0.10 >More info Control for tissue data whole embryo Original data
448 whole roots 140 mM NaCl 16 hour 0.58 >More info -0.10 >More info whole roots standard Original data GEO bulk
449 arp6-10 12 ºC -0.56 >More info 0.09 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
450 cngc19 0.52 >More info -0.05 >More info Col-0 root Original data GEO bulk
451 Dark 6h wt -0.51 >More info 0.04 >More info 0h wt Original data
452 WT Atum 2h -0.75 >More info 0.28 >More info WT 0h Leaf tissue Original data GEO bulk
453 bri1-5 mutant -0.57 >More info 0.10 >More info WT 7 day-old whole seedlings Original data
454 seedling -S Exp 0.57 >More info -0.10 >More info seedling FN Exp seedling Original data
455 RGA-GR-DEX -0.55 >More info 0.10 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
456 Mutant ufo-1(flower) -0.56 >More info 0.12 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
457 amiR-ETP1/2 0.55 >More info -0.11 >More info Col-0 air Original data GEO bulk
458 ALC Toc1 light-dark EtOH 0.58 >More info -0.14 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
459 root cortex 40 mM NaCl 0.57 >More info -0.13 >More info root cortex Original data GEO bulk
460 hai1-2 0.51 >More info -0.08 >More info control control whole seedlings Original data GEO bulk
461 rdr6-11 ein5-1 ski2-3 -0.58 >More info 0.16 >More info Col-0 aerial tissue Original data
462 P. infestans 6 h (leaf) 0.56 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
463 46T-CK -0.54 >More info 0.13 >More info WT-CK none Original data
464 ckh1 CK25 0.50 >More info -0.09 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
465 torpedo-apical -0.51 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
466 slr-1 0h NAA -0.50 >More info 0.10 >More info Col-0 0h NAA Original data GEO bulk
467 Col PSTDC3000 24h 0.52 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
468 NaCl cpctry 0.50 >More info -0.11 >More info NaCl Col Original data GEO bulk
469 Col BTH -0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
470 mutant acs2C (single mutant) -0.52 >More info 0.14 >More info col control (single mutant) Original data GEO bulk
471 ABA 0.60 >More info -0.22 >More info control Original data GEO bulk
472 sfr2 control 0.65 >More info -0.27 >More info WT control All aerial tissue Original data GEO bulk
473 root cells stele 140mM NaCl 8 hours 0.52 >More info -0.15 >More info root cells stele standard 1 hour root cells stele Original data
474 BAM7-N Ox untreated 0.50 >More info -0.14 >More info WT untreated none shoot Original data
475 root cells stele 140mM NaCl 3 hours 0.53 >More info -0.17 >More info root cells stele standard 1 hour root cells stele Original data
476 CCA1-ox 6am non-polysomal -0.15 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
477 root endodermis and quiescent center pH4.6 -0.66 >More info 0.32 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
478 WT Atum 1h -0.52 >More info 0.20 >More info WT 0h Leaf tissue Original data GEO bulk
479 Mutant gh3.5-1D -0.51 >More info 0.21 >More info Col-0 Original data GEO bulk
480 CAX1/CAX3 mutant -0.51 >More info 0.21 >More info Col whole plant Original data GEO bulk
481 gpa1-4/agb1-2 ozone 3h -0.55 >More info 0.28 >More info Col ozone 3h ozone Original data GEO bulk
482 ptpks2 -0.26 >More info 0.53 >More info Col-WT leaves Original data GEO bulk
483 Cor hrpS 24h -0.50 >More info 0.28 >More info Mock 24h Cor hrpS Original data GEO bulk
484 OH1 -0.50 >More info 0.38 >More info Col-0 leaves Original data GEO bulk
485 seed germinating in countinuous light 24h SL -0.56 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
486 bri1-116 -0.62 >More info 0.73 >More info Col seedling Original data GEO bulk
487 siliques AtHb1 control -0.42 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
488 Shoot apex inflorescence (after bolting) -0.58 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages