4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rrd1 IBA
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List of experiments correlated with "rrd1 IBA"  Help Download transcriptome of top 30
Score Experiment Correlation from
rrd1 IBA		 Correlation to
rrd1 IBA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rrd1 IBA 1.00 >More info 1.00 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
2 rrd2 IBA 0.75 >More info 0.76 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
3 rid4 IBA 0.70 >More info 0.75 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
4 Cs shoot 0.29 >More info 0.81 >More info control shoot Original data GEO bulk
5 Hydrogen Peroxide 500 uM -0.56 >More info -0.52 >More info Control RB and PER Hydrogen Peroxide Original data
6 bri1-116 0.35 >More info 0.73 >More info Col seedling Original data GEO bulk
7 shoot control pSultr2:2 -0.72 >More info -0.35 >More info shoot control total Original data GEO bulk
8 ein2 mutant roots mock 0.39 >More info 0.64 >More info roots mock Original data GEO bulk
9 Heat no recovery 0.73 >More info 0.28 >More info Mock no recovery seedling Original data GEO bulk
10 ein2 mutant roots IAA 0.52 >More info 0.49 >More info roots ethylene Original data GEO bulk
11 shoot control pGL2 -0.71 >More info -0.30 >More info shoot control total Original data GEO bulk
12 KCl germinant 0.43 >More info 0.57 >More info Millipore Water germinant KCl seedling Original data
13 seed germinating in countinuous light 24h SL 0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
14 shoot control pRBCS -0.68 >More info -0.28 >More info shoot control total Original data GEO bulk
15 root hypoxia pPEP -0.45 >More info -0.50 >More info root hypoxia total hypoxia root Original data GEO bulk
16 safener treated -0.55 >More info -0.39 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
17 piffq FR 1h 0.58 >More info 0.36 >More info WT FR 1h whole seedling Original data GEO bulk
18 35S:VND7-VP16-GR+CHX 0.21 >More info 0.72 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
19 WT +elf18 10h -0.61 >More info -0.31 >More info WT untreated elf18 Original data GEO bulk
20 aba2 1% sucrose 12-day-old -0.60 >More info -0.32 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
21 abi1 hypocotyl -0.58 >More info -0.33 >More info Ler hypocotyl hypocotyl Original data GEO bulk
22 cpr5npr1svi1 -0.53 >More info -0.37 >More info WT(COL) Original data GEO bulk
23 Day Time Treatment 0.50 >More info 0.39 >More info Day Time Control 1hr white light pulse aerial rosette Original data
24 vtc2 (I) -0.53 >More info -0.36 >More info Col (I) rosette Original data GEO bulk
25 Shoot apex inflorescence (after bolting) 0.24 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
26 PNO8 3 h -0.34 >More info -0.54 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
27 pmr4-1 powdery mildew -0.54 >More info -0.33 >More info WT powdery mildew uninoculated Original data GEO bulk
28 ga1-3 SCL3OE 0.54 >More info 0.33 >More info ga1-3 whole root Original data
29 AgNO3 3 h -0.31 >More info -0.56 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
30 nas4x roots - Fe 0.58 >More info 0.27 >More info WT roots - Fe Roots Original data GEO bulk
31 chalazal seed coat heart stage 0.50 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
32 efr-1 +elf18 10h 0.57 >More info 0.27 >More info WT +elf18 10h elf18 Original data GEO bulk
33 seedling 1.5h after Gamma atm-1 -0.58 >More info -0.26 >More info seedling day 1 unirradiated atm-1 1.5h Original data
34 MPK6 ox Shoot Hypoxia -0.15 >More info -0.69 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
35 ARR22-ox (t-zeatin 3 h) -0.55 >More info -0.28 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
36 arr-BA-sample 0.50 >More info 0.32 >More info Wt-BA-sample seedling Original data
37 C24 24h cold 0.56 >More info 0.26 >More info Col 24h cold leaf Original data GEO bulk
38 tor mutant glucose -0.52 >More info -0.30 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
39 TNT-seedlings -0.18 >More info -0.63 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
40 toc1-1-53hr -0.29 >More info -0.51 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
41 hrpA 7h -0.30 >More info -0.50 >More info Mock 7h hrpA Original data GEO bulk
42 shoot hypoxia pCER5 -0.70 >More info -0.10 >More info shoot hypoxia total Original data GEO bulk
43 piffq FR 3h 0.53 >More info 0.26 >More info WT FR 3h whole seedling Original data GEO bulk
44 WT roots - Fe -0.59 >More info -0.20 >More info WT roots + Fe Roots Original data GEO bulk
45 amiRAP aerobic 0.29 >More info 0.50 >More info WT aerobic aerobic Original data GEO bulk
46 seedling 12h after HZE atm-1 -0.60 >More info -0.18 >More info seedling day 1 unirradiated atm-1 12h Original data
47 WUSp cells -0.59 >More info -0.19 >More info Protoplast Induced Original data GEO bulk
48 CeO2 germinant 0.21 >More info 0.57 >More info Millipore Water germinant CeO2 seedling Original data
49 Col-0 root drought 0.67 >More info 0.10 >More info Col-0 root water root Original data GEO bulk
50 shoot control pCER5 -0.74 >More info -0.03 >More info shoot control total Original data GEO bulk
51 sav1-1 shade -0.54 >More info -0.23 >More info Col-0 shade seedlings Original data GEO bulk
52 6-trichlorophenoxyacetic acid 3 h -0.23 >More info -0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
53 WT +elf18 2h -0.55 >More info -0.21 >More info WT untreated elf18 Original data GEO bulk
54 4C 24h 0.53 >More info 0.23 >More info 4C 0h Original data GEO bulk
55 Col-0 C2H4 24h -0.26 >More info -0.50 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
56 Stigma 0.56 >More info 0.19 >More info Seedling Original data GEO bulk
57 5-Triiodobenzoic acid3 h -0.21 >More info -0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
58 root cells endodermis and quiescent center -Fe 0.56 >More info 0.18 >More info whole roots standard Original data GEO bulk
59 ABA control 0.20 >More info 0.54 >More info No ABA control Original data GEO bulk
60 arp6-10 12 ºC -0.17 >More info -0.56 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
61 Total RNA 35S:HF-RPL18 -0.18 >More info -0.54 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
62 seedling 6h after HZE atm-1 -0.66 >More info -0.05 >More info seedling day 1 unirradiated atm-1 6h Original data
63 piffq 3d WL 0.54 >More info 0.16 >More info WT 3d WL whole seedling Original data GEO bulk
64 Col BTH 0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
65 pistil 3.5HAP -0.51 >More info -0.19 >More info unpollinated pistil pistil Original data GEO bulk
66 rgs1+no sugars 0.20 >More info 0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
67 stele pSHR 0h BL 0.55 >More info 0.13 >More info WR 35S 0h BL brassinosteroid root Original data
68 cngc4 -0.12 >More info -0.56 >More info Ws-2 Seedlings Original data GEO bulk
69 root columella root cap -S 0.51 >More info 0.16 >More info root columella root cap pH5.7 Original data GEO bulk
70 seedling 12h after Gamma atm-1 -0.51 >More info -0.16 >More info seedling day 1 unirradiated atm-1 12h Original data
71 vte2-1 3d vernalization -0.50 >More info -0.17 >More info WT 3d vernalization Original data GEO bulk
72 Heat 6h-recover 48h -0.61 >More info -0.06 >More info Heat 6h rosettes - 5 leaves stage Original data
73 oas-a1.1 root 0.58 >More info 0.07 >More info WT-Untreated Root Original data GEO bulk
74 whole seeds 0.53 >More info 0.11 >More info Control for tissue data Original data GEO bulk
75 Heat 6h 0.63 >More info 0.01 >More info At mock rosettes - 5 leaves stage Original data
76 Te CA 0.56 >More info 0.07 >More info Col CA Leaves Original data
77 E.orontii Infection 6 h -0.07 >More info -0.56 >More info Uninfection 6 h Original data Elicitor treatments
78 RRE2 0.53 >More info 0.10 >More info Col C Original data GEO bulk
79 whole roots 140 mM NaCl 4 hour 0.05 >More info 0.57 >More info whole roots standard Original data GEO bulk
80 pab polysome -0.07 >More info 0.68 >More info WT polysome seedling shoot/aerial seedling Original data
81 whole seeds mature green 0.50 >More info 0.11 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
82 FILp cells -0.54 >More info -0.05 >More info Protoplast Induced Original data GEO bulk
83 root cells -Fe 0.50 >More info 0.09 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
84 Laer pretreat GA Flg22 1h -0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
85 P35S:rGRF3 -0.50 >More info -0.08 >More info WS Original data GEO bulk
86 short 17-degree- -0.01 >More info 0.58 >More info control short Original data GEO bulk
87 embryo proper mature green 0.50 >More info 0.06 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
88 GST-overexpression seedlings control -0.55 >More info 0.00 >More info WT seedlings control Seedlings Original data
89 pistil 8.0HAP -0.51 >More info -0.04 >More info unpollinated pistil pistil Original data GEO bulk
90 seed coat 0.51 >More info 0.04 >More info Control for tissue data Original data GEO bulk
91 RGA-GR-DEX 0.06 >More info -0.60 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
92 Mh0 UV 0.55 >More info -0.02 >More info Mh0 mock UV seedling Original data
93 ms35 silique stage 7 -0.02 >More info -0.51 >More info Ler 6.7 anther and filament Original data GEO bulk
94 Heat shock optimum -0.12 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
95 Shoot -Cs 0.04 >More info -0.57 >More info Control-shoot Original data GEO bulk
96 nhx5-2/nhx6 0.51 >More info 0.01 >More info WT Rosette leaf Original data GEO bulk
97 Col leaf scrape 5 dpi 0.56 >More info -0.05 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
98 an3-4 leaf primordia 0.54 >More info -0.03 >More info WT leaf primordia Original data GEO bulk
99 chalazal seed coat 0.51 >More info -0.01 >More info Control for tissue data Original data GEO bulk
100 Heat shock 30%Inhibition 0.55 >More info -0.05 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
101 light-hs 0.53 >More info -0.03 >More info light-control seedling Original data
102 ptpks2 -0.14 >More info 0.64 >More info Col-WT leaves Original data GEO bulk
103 seedling -S Exp 0.05 >More info -0.55 >More info seedling FN Exp seedling Original data
104 Heat 0.56 >More info -0.07 >More info Control 90 minutes at 38°C. Original data GEO bulk
105 seedling 3h after HZE WT -0.51 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
106 glk1 glk2 GLK1-GR +DEX 24h 0.52 >More info -0.04 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
107 short 14-degree- -0.02 >More info 0.50 >More info control short Original data GEO bulk
108 ACN1-2 0.16 >More info -0.64 >More info col-7 Original data GEO bulk
109 Heat shock 20%Inhibition 0.53 >More info -0.06 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
110 small flower buds J10B -0.55 >More info 0.09 >More info small flower buds J03B small flower buds Original data GEO bulk
111 roottip hypoxia pSCR 0.06 >More info -0.52 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
112 IAA7mII over-expressor IAA Treated -0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
113 sfr6 cold 0.11 >More info -0.55 >More info WT cold All aerial tissue Original data GEO bulk
114 -Sulfate 24 h 0.07 >More info -0.51 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
115 tga1 tga4 2h KCl -0.13 >More info 0.57 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
116 pkl-1 0.55 >More info -0.12 >More info WT whole seedling Original data GEO bulk
117 Leafminer damaged seedlings -0.13 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
118 siliques AtHb1 control -0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
119 6xX2x interploidy cross -0.57 >More info 0.16 >More info 2xX2x cross Original data GEO bulk
120 chalazal endosperm heart stage 0.51 >More info -0.13 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
121 CCA1-ox 6am non-polysomal -0.25 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
122 Col0-PsmES4326-24hpi -0.36 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk