4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on shoot control pRBCS
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "shoot control pRBCS"  Help Download transcriptome of top 30
Score Experiment Correlation from
shoot control pRBCS		 Correlation to
shoot control pRBCS		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 shoot control pRBCS 1.00 >More info 1.00 >More info shoot control total Original data GEO bulk
2 shoot control pGL2 0.90 >More info 0.89 >More info shoot control total Original data GEO bulk
3 shoot hypoxia pRBCS 0.89 >More info 0.85 >More info shoot hypoxia total Original data GEO bulk
4 shoot hypoxia pGL2 0.87 >More info 0.87 >More info shoot hypoxia total Original data GEO bulk
5 shoot control pSultr2:2 0.87 >More info 0.84 >More info shoot control total Original data GEO bulk
6 shoot control p35S 0.72 >More info 0.92 >More info shoot control total Original data GEO bulk
7 shoot hypoxia p35S 0.67 >More info 0.88 >More info shoot hypoxia total Original data GEO bulk
8 shoot control pSUC2 0.80 >More info 0.50 >More info shoot control total Original data GEO bulk
9 shoot control pKAT1 0.64 >More info 0.57 >More info shoot control total Original data GEO bulk
10 Seedling-control POLYSOMESmRNA 0.51 >More info 0.62 >More info Seedling-control TOTALmRNA seedling Original data
11 shoot hypoxia pSUC2 0.70 >More info 0.38 >More info shoot hypoxia total Original data GEO bulk
12 MPK6 ox Shoot Hypoxia 0.31 >More info 0.76 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
13 pab polysome -0.26 >More info -0.79 >More info WT polysome seedling shoot/aerial seedling Original data
14 rsa3-1 Na 24h 0.51 >More info 0.49 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
15 Rose Bengal 0.5 uM 0.41 >More info 0.58 >More info Control RB and PER Rose Bengal Original data
16 mkk1 control rep -0.37 >More info -0.61 >More info Col-0 Time 0 rep Original data GEO bulk
17 35S:ATR1 like miR -0.32 >More info -0.66 >More info WT for miR Original data GEO bulk
18 phyB Rc50 0.55 >More info 0.42 >More info WT(Ler) Rc50 Original data GEO bulk
19 fri-flc -0.51 >More info -0.46 >More info WT Original data GEO bulk
20 rrd1 IBA -0.28 >More info -0.68 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
21 bri1-116 0.23 >More info 0.73 >More info Col seedling Original data GEO bulk
22 35S::Zat12 -0.50 >More info -0.45 >More info WT Original data GEO bulk
23 Aerobic prt6 0.44 >More info 0.50 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
24 root hypoxia p35S 0.39 >More info 0.53 >More info root hypoxia total hypoxia root Original data GEO bulk
25 sav1-1 shade 0.41 >More info 0.51 >More info Col-0 shade seedlings Original data GEO bulk
26 root control pSUC2 0.52 >More info 0.39 >More info root control total control root Original data GEO bulk
27 shoot hypoxia total 0.39 >More info 0.52 >More info shoot control total Original data GEO bulk
28 ACN1-2 Sucrose 0.23 >More info 0.67 >More info Col-7 Sucrose Original data GEO bulk
29 piffq 2d WL -0.28 >More info -0.61 >More info WT 2d WL whole seedling Original data GEO bulk
30 shoot hypoxia pKAT1 0.60 >More info 0.28 >More info shoot hypoxia total Original data GEO bulk
31 xyl-grown cell culture- 1h 1mM Suc 0.22 >More info 0.66 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
32 shoot control pCER5 0.68 >More info 0.19 >More info shoot control total Original data GEO bulk
33 Mutant arf19-1 -0.31 >More info -0.56 >More info Col Original data GEO bulk
34 root control pSultr2:2 0.54 >More info 0.32 >More info root control total control root Original data GEO bulk
35 6h volatiles Sp. HRO-C48 0.30 >More info 0.56 >More info 6h untreated whole seedling Original data GEO bulk
36 root - 04% oxygen - 30min 0.26 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
37 WT Root Hypoxia 0.24 >More info 0.61 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
38 Aerobic e1 ate2 0.33 >More info 0.51 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
39 SHR-GR Time 3H Dex -0.24 >More info -0.58 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
40 MPK6 ox Root Hypoxia 0.16 >More info 0.65 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
41 shoot-10 μM DEX- 24hr 0.25 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
42 shoot hypoxia pCER5 0.58 >More info 0.21 >More info shoot hypoxia total Original data GEO bulk
43 IAA7mII over-expressor IAA Treated 0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
44 Laer pretreat GA Flg22 1h 0.08 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
45 ABA control -0.09 >More info -0.70 >More info No ABA control Original data GEO bulk
46 root control pRPL11C 0.54 >More info 0.23 >More info root control total control root Original data GEO bulk
47 Mutant ga1-5 -0.26 >More info -0.51 >More info Ler-1 Original data Comparison of plant hormone related mutant
48 piffq FR 1h -0.26 >More info -0.51 >More info WT FR 1h whole seedling Original data GEO bulk
49 Col BTH 0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
50 Mutant sav3-2 (WL) 0.21 >More info 0.55 >More info Col-0 (WL) Original data GEO bulk
51 Octopus overexpressor 35SDYG25 0.25 >More info 0.51 >More info WS Original data GEO bulk
52 oligomycin 1 h 0.18 >More info 0.58 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
53 sav3-2 light 0.21 >More info 0.55 >More info Col-0 light seedlings Original data GEO bulk
54 GO5; 0h switch to ambient CO2 concentrations; -0.17 >More info -0.59 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
55 root control pPEP 0.50 >More info 0.25 >More info root control total control root Original data GEO bulk
56 2hr continuous KNO3 EPR cell 0.07 >More info 0.68 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
57 S14-150 0.23 >More info 0.52 >More info wt Original data GEO bulk
58 AtMYB30-as 90-105 min Xanthomonas 0.25 >More info 0.50 >More info WT 90-105 min Xanthomonas Original data GEO bulk
59 12h volatiles Sp. HRO-C48 -0.50 >More info -0.24 >More info 12h untreated whole seedling Original data GEO bulk
60 ANOXIA -0.14 >More info -0.59 >More info ANOXIA+SUCROSE Original data GEO bulk
61 shoots bhlh100/101 100uM Fe 0.19 >More info 0.54 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
62 ckh1 CK200 0.14 >More info 0.57 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
63 rcf1-1 cold 24h 0.10 >More info 0.61 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
64 Shoot apex inflorescence (after bolting) 0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
65 Col-0 2HS 0.18 >More info 0.51 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
66 dense canopy 0.18 >More info 0.50 >More info single (control) petiole Original data GEO bulk
67 sav1-1 light 0.15 >More info 0.52 >More info Col-0 light seedlings Original data GEO bulk
68 Col0-PsmES4326-24hpi 0.06 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
69 10min Reillumination IP RNA 0.55 >More info 0.11 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
70 ACN1-2 0.10 >More info 0.56 >More info col-7 Original data GEO bulk
71 aba3-1 0.11 >More info 0.54 >More info wt Original data GEO bulk
72 ckh2 CK25 0.07 >More info 0.58 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
73 root control pWOL 0.52 >More info 0.11 >More info root control total control root Original data GEO bulk
74 seed germinating in countinuous light 24h SL -0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
75 Heat shock optimum -0.08 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
76 Leafminer damaged seedlings -0.03 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
77 ckh2 CK200 -0.03 >More info 0.54 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
78 4C 1h -0.10 >More info 0.58 >More info 4C 0h Original data GEO bulk
79 3x(m) -0.16 >More info 0.64 >More info 2x two week old seedlings Original data
80 Col whole leaf 3dpi -0.10 >More info 0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
81 root control pSHR 0.51 >More info -0.05 >More info root control total control root Original data GEO bulk
82 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
83 WT 3h -P -0.12 >More info 0.51 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
84 siliques AtHb1 control -0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
85 Polysomal RNA 35S:AtCSP1-FH1 cold 0.22 >More info -0.54 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
86 2hr transitory KNO3 PrR cell -0.21 >More info 0.53 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk