4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on shoot hypoxia pRBCS
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List of experiments correlated with "shoot hypoxia pRBCS"  Help Download transcriptome of top 30
Score Experiment Correlation from
shoot hypoxia pRBCS		 Correlation to
shoot hypoxia pRBCS		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 shoot hypoxia pRBCS 1.00 >More info 1.00 >More info shoot hypoxia total Original data GEO bulk
2 shoot control pRBCS 0.85 >More info 0.89 >More info shoot control total Original data GEO bulk
3 shoot control p35S 0.80 >More info 0.92 >More info shoot control total Original data GEO bulk
4 shoot hypoxia pGL2 0.83 >More info 0.89 >More info shoot hypoxia total Original data GEO bulk
5 shoot hypoxia p35S 0.81 >More info 0.90 >More info shoot hypoxia total Original data GEO bulk
6 shoot control pGL2 0.81 >More info 0.86 >More info shoot control total Original data GEO bulk
7 shoot control pSultr2:2 0.83 >More info 0.83 >More info shoot control total Original data GEO bulk
8 shoot control pSUC2 0.81 >More info 0.49 >More info shoot control total Original data GEO bulk
9 Seedling-control POLYSOMESmRNA 0.62 >More info 0.63 >More info Seedling-control TOTALmRNA seedling Original data
10 shoot hypoxia pKAT1 0.73 >More info 0.47 >More info shoot hypoxia total Original data GEO bulk
11 shoot hypoxia pSUC2 0.78 >More info 0.41 >More info shoot hypoxia total Original data GEO bulk
12 35S:ATR1 like miR -0.50 >More info -0.65 >More info WT for miR Original data GEO bulk
13 Ba1 UV 0.54 >More info 0.61 >More info Ba1 mock UV seedling Original data
14 xyl-grown cell culture- 1h 1mM Suc 0.42 >More info 0.72 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
15 Mutant gh3.5-1D -0.58 >More info -0.53 >More info Col-0 Original data GEO bulk
16 35S::Zat12 -0.58 >More info -0.53 >More info WT Original data GEO bulk
17 root hypoxia p35S 0.52 >More info 0.58 >More info root hypoxia total hypoxia root Original data GEO bulk
18 Imbibed 1 h (seed) 0.61 >More info 0.49 >More info Dry seed Original data Time course of early seed germination
19 gpa1 +ABA LF -0.54 >More info -0.52 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
20 mkk1 control rep -0.46 >More info -0.54 >More info Col-0 Time 0 rep Original data GEO bulk
21 shoot control pKAT1 0.51 >More info 0.48 >More info shoot control total Original data GEO bulk
22 SHR-GR Time 3H Dex -0.46 >More info -0.51 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
23 bZIP1ko mutant N+Light- 0.38 >More info 0.59 >More info WT-sib N+Light- whole plant Original data GEO bulk
24 agb1 gpa1 +ABA LF -0.45 >More info -0.51 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
25 12h volatiles Sp. HRO-C48 -0.63 >More info -0.32 >More info 12h untreated whole seedling Original data GEO bulk
26 des1.1 0.53 >More info 0.40 >More info Leaves-WT leaf Original data GEO bulk
27 gun1-1 +lincomycin 0.51 >More info 0.42 >More info Col-0 +lincomycin Original data GEO bulk
28 mutant acs2C (single mutant) -0.54 >More info -0.38 >More info col control (single mutant) Original data GEO bulk
29 root control p35S 0.51 >More info 0.40 >More info root control total control root Original data GEO bulk
30 wrky72-1-NOCO2 INFECTED -0.56 >More info -0.34 >More info WT-NOCO2 INFECTED Original data GEO bulk
31 gun1-9 norflurazon 0.56 >More info 0.34 >More info gun1-9 control Original data GEO bulk
32 shoot hypoxia pCER5 0.65 >More info 0.25 >More info shoot hypoxia total Original data GEO bulk
33 ANOXIA -0.36 >More info -0.54 >More info ANOXIA+SUCROSE Original data GEO bulk
34 pab polysome -0.13 >More info -0.77 >More info WT polysome seedling shoot/aerial seedling Original data
35 root hypoxia pPEP 0.55 >More info 0.33 >More info root hypoxia total hypoxia root Original data GEO bulk
36 Aerobic prt6 0.50 >More info 0.38 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
37 mbd11 mutant thaliana 10-day-old seedling 0.37 >More info 0.51 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
38 mutant acs4A (single mutant) -0.52 >More info -0.35 >More info col control (single mutant) Original data GEO bulk
39 1 h Light IP RNA 0.69 >More info 0.17 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
40 pab total -0.54 >More info -0.31 >More info WT total seedling shoot/aerial seedling Original data
41 35S:RPS4 rrs1-11 2h -0.51 >More info -0.34 >More info 35S:RPS4 2h leaves Original data
42 15m.KNO3 -0.53 >More info -0.32 >More info To. KNO3 14 day old Roots Original data GEO bulk
43 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
44 root control pSUC2 0.57 >More info 0.27 >More info root control total control root Original data GEO bulk
45 Laer pretreat GA Flg22 1h 0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
46 MPK6 ox Shoot Hypoxia 0.08 >More info 0.74 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
47 bri1-116 0.08 >More info 0.73 >More info Col seedling Original data GEO bulk
48 6h volatiles Sm. R3089 -0.52 >More info -0.27 >More info 6h untreated whole seedling Original data GEO bulk
49 10min Reillumination IP RNA 0.63 >More info 0.16 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
50 mutant acs5D (single mutant) -0.54 >More info -0.25 >More info col control (single mutant) Original data GEO bulk
51 root epidermis and lateral root cap 40 mM NaCl -0.60 >More info -0.18 >More info root epidermis and lateral root cap Original data GEO bulk
52 seed germinating in countinuous light 24h SL 0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
53 over-tAPX 0.50 >More info 0.27 >More info WT Col Original data GEO bulk
54 root control pRPL11C 0.57 >More info 0.20 >More info root control total control root Original data GEO bulk
55 mutant acs9B (single mutant) -0.54 >More info -0.22 >More info col control (single mutant) Original data GEO bulk
56 MYB29 OE 0.50 >More info 0.26 >More info WT for MYB29/76 Original data GEO bulk
57 Rsch 8h -0.53 >More info -0.23 >More info Rsch CA Leaves Original data
58 GA 120min 0.24 >More info 0.52 >More info CON120 GA 120 min. root tips Original data GEO bulk
59 Col0-PsmES4326-24hpi 0.14 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
60 shoot control pCER5 0.68 >More info 0.06 >More info shoot control total Original data GEO bulk
61 root control pSultr2:2 0.56 >More info 0.18 >More info root control total control root Original data GEO bulk
62 IAA 0h 0.53 >More info 0.20 >More info control 0h root Original data GEO bulk
63 root control pWOL 0.62 >More info 0.09 >More info root control total control root Original data GEO bulk
64 ACN1-2 Sucrose 0.07 >More info 0.63 >More info Col-7 Sucrose Original data GEO bulk
65 Night Time Treatment 0.52 >More info 0.17 >More info Night Time Control 1hr white light pulse aerial rosette Original data
66 mil4 BTH -0.53 >More info -0.16 >More info Col BTH rosettes Original data GEO bulk
67 root control pPEP 0.59 >More info 0.10 >More info root control total control root Original data GEO bulk
68 FLIGHT TAGESB plate6 ROOTS -0.51 >More info -0.17 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
69 Leafminer damaged seedlings 0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
70 sex1-3 0.50 >More info 0.18 >More info Col-WT leaves Original data GEO bulk
71 phyB Rc50 0.50 >More info 0.18 >More info WT(Ler) Rc50 Original data GEO bulk
72 IAA7mII over-expressor IAA Treated -0.02 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
73 phyB mutant 16C 10hrs -0.07 >More info -0.60 >More info 16C 10h whole plant excluding roots Original data GEO bulk
74 root control pGL2 0.57 >More info 0.07 >More info root control total control root Original data GEO bulk
75 Control KNO3 roots - 2hours 0.53 >More info 0.10 >More info Control KCl roots - 2hours 5mM KNO3 on both sides for 2 hours roots Original data GEO bulk
76 Col-0 DEX Shade -0.51 >More info -0.11 >More info Col-0 DEX WL seedlings Original data
77 Mutant iaa17-6 (IAA) 0.50 >More info 0.11 >More info Col (IAA) Original data GEO bulk
78 Heat shock optimum -0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
79 ckh1 CK200 0.07 >More info 0.52 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
80 root cortex -S -0.51 >More info -0.08 >More info root cortex pH5.7 Original data GEO bulk
81 piffq 2d WL -0.02 >More info -0.57 >More info WT 2d WL whole seedling Original data GEO bulk
82 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
83 piffq FR 1h -0.05 >More info -0.52 >More info WT FR 1h whole seedling Original data GEO bulk
84 Imbibed 24 h ABA 30uM (seed) -0.50 >More info -0.06 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
85 root control pSHR 0.54 >More info 0.02 >More info root control total control root Original data GEO bulk
86 ABA control 0.09 >More info -0.65 >More info No ABA control Original data GEO bulk
87 ML (Mature leaves) 35DAS 0.56 >More info -0.02 >More info Control for tissue data Original data GEO bulk
88 swn-7 0.51 >More info 0.01 >More info Col whole plant Original data GEO bulk
89 root cells endodermis and quiescent center -Fe -0.53 >More info 0.02 >More info whole roots standard Original data GEO bulk
90 siliques AtHb1 control -0.01 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
91 sfr3 warm 0.51 >More info -0.05 >More info WT-warm aerial tissues Original data GEO bulk
92 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.55 >More info 0.10 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
93 Apex 14DAS 0.52 >More info -0.08 >More info Control for tissue data Original data GEO bulk
94 35S:PCO1 hypoxia -0.52 >More info 0.08 >More info WT hypoxia whole rosette Original data
95 root cells -Fe -0.52 >More info 0.10 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
96 inhibitor B Treated -0.50 >More info 0.15 >More info Negative Control Original data GEO bulk
97 ACN1-2 -0.16 >More info 0.51 >More info col-7 Original data GEO bulk
98 WT NAA 1h -0.16 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
99 ckh2 CK25 -0.16 >More info 0.50 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
100 CCA1-ox 6am non-polysomal -0.17 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
101 root cells cortex -Fe -0.56 >More info 0.26 >More info whole roots standard Original data GEO bulk
102 ckh2 CK200 -0.25 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
103 vtc2 mature somatic embryo -0.30 >More info 0.50 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk