4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on piffq 2d WL
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List of experiments correlated with "piffq 2d WL"  Help Download transcriptome of top 30
Score Experiment Correlation from
piffq 2d WL		 Correlation to
piffq 2d WL		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 piffq 2d WL 1.00 >More info 1.00 >More info WT 2d WL whole seedling Original data GEO bulk
2 piffq FR 1h 0.88 >More info 0.84 >More info WT FR 1h whole seedling Original data GEO bulk
3 piffq 3d WL 0.80 >More info 0.81 >More info WT 3d WL whole seedling Original data GEO bulk
4 ABA control 0.77 >More info 0.79 >More info No ABA control Original data GEO bulk
5 pab polysome 0.67 >More info 0.82 >More info WT polysome seedling shoot/aerial seedling Original data
6 piffq FR 24h 0.82 >More info 0.63 >More info WT FR 24h whole seedling Original data GEO bulk
7 GA4 3 h (ga1 seed) 0.80 >More info 0.64 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
8 Ws seedlings 0.77 >More info 0.66 >More info ged1 seedlings Original data GEO bulk
9 ged1 seedlings -0.77 >More info -0.66 >More info Ws seedlings Original data GEO bulk
10 ACN1-2 Sucrose -0.73 >More info -0.68 >More info Col-7 Sucrose Original data GEO bulk
11 phyABCDE Dark 0.71 >More info 0.67 >More info WT Dark Dark whole seedling Original data GEO bulk
12 35S-MIF1 dark grown 0.72 >More info 0.66 >More info Dark-grown WT control Original data GEO bulk
13 clf-28 swn-7 0.78 >More info 0.59 >More info Col whole plant Original data GEO bulk
14 mdh 0.74 >More info 0.56 >More info Col Original data GEO bulk
15 piffq FR 3h 0.85 >More info 0.45 >More info WT FR 3h whole seedling Original data GEO bulk
16 ACN1-2 -0.67 >More info -0.63 >More info col-7 Original data GEO bulk
17 pab nonpolysome 0.57 >More info 0.72 >More info WT nonpolysome seedling shoot/aerial seedling Original data
18 phyABDE Dark 0.67 >More info 0.60 >More info WT Dark Dark whole seedling Original data GEO bulk
19 gul2-1 mutant 0.71 >More info 0.54 >More info WT 7 day-old whole seedlings Original data
20 Col-7 Sucrose 0.65 >More info 0.59 >More info col-7 Original data GEO bulk
21 shoot control pGL2 -0.72 >More info -0.50 >More info shoot control total Original data GEO bulk
22 MPK6 ox Shoot Hypoxia -0.63 >More info -0.58 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
23 hsfa1 quadruple mutant 0.69 >More info 0.50 >More info WT (Col-0) whole seedling Original data GEO bulk
24 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.66 >More info -0.52 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
25 rsa3-1 Na 24h -0.64 >More info -0.53 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
26 gul2-1 bri1-5 mutant 0.70 >More info 0.47 >More info WT 7 day-old whole seedlings Original data
27 rosettes myoox drought 0.62 >More info 0.54 >More info rosettes myoox watered Original data GEO bulk
28 red illumination +lincomycin 0.54 >More info 0.62 >More info red illumination -lincomycin Original data GEO bulk
29 siliques AtHb1 control 0.64 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
30 hsfa1 quadruple mutant heat shock 0.64 >More info 0.51 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
31 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 0.57 >More info 0.56 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
32 shoot control pSultr2:2 -0.75 >More info -0.37 >More info shoot control total Original data GEO bulk
33 rosettes WT drought 0.61 >More info 0.51 >More info rosettes WT watered Original data GEO bulk
34 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.65 >More info -0.47 >More info 2d dark-grown WT seedling Original data GEO bulk
35 eif3h polysome 0.78 >More info 0.33 >More info WT polysome Original data GEO bulk
36 etiolated atbzip16 0.67 >More info 0.44 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
37 35S-MIF1 light grown 0.58 >More info 0.53 >More info Light-grown WT control Original data GEO bulk
38 dsr1 -0.46 >More info -0.64 >More info WT mock Whole seedling Original data GEO bulk
39 eif3h 0.75 >More info 0.34 >More info WT Original data GEO bulk
40 WT Seedling BL+ABA 0.70 >More info 0.39 >More info WT Seedling BL Original data GEO bulk
41 estradiol induced LEC1 0.67 >More info 0.41 >More info control Original data GEO bulk
42 sicy-192 cotyledons 0.61 >More info 0.47 >More info WT cotyledons cotyledons Original data
43 35S::Zat12+H2O2 0.70 >More info 0.38 >More info WT+H2O2 H2O2 Original data GEO bulk
44 Estradiol4 days 0.67 >More info 0.41 >More info Col Original data GEO bulk
45 sicy-192 gun1-101 cotyledons 0.62 >More info 0.45 >More info WT cotyledons cotyledons Original data
46 fri-flc 0.63 >More info 0.43 >More info WT Original data GEO bulk
47 embryo ABA 0.66 >More info 0.40 >More info embryo-control ABA embryo Original data GEO bulk
48 MPK6 ox Root Hypoxia -0.67 >More info -0.39 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
49 Red/FR Light 4 h -0.47 >More info -0.59 >More info FarRed Light 4 h Original data Light treatments
50 Heat no recovery 0.60 >More info 0.43 >More info Mock no recovery seedling Original data GEO bulk
51 ahg1-1 0.62 >More info 0.40 >More info ABA control Original data GEO bulk
52 60m light 0.69 >More info 0.33 >More info before light whole seedlings Original data GEO bulk
53 seed germinating in countinuous light 24h SL 0.35 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
54 embryo paclobutrazol 0.65 >More info 0.36 >More info embryo-control paclobutrazol embryo Original data GEO bulk
55 ARF10 -0.72 >More info -0.28 >More info Col-0 Original data GEO bulk
56 root cap pGL2 8h BL 0.60 >More info 0.40 >More info root cap pGL2 0h BL brassinosteroid root Original data
57 shoot hypoxia pGL2 -0.68 >More info -0.32 >More info shoot hypoxia total Original data GEO bulk
58 ga1-3 1h GA4 -0.65 >More info -0.35 >More info ga1-3 1h water shoots Original data GEO bulk
59 rsa1 salt 12 h 0.62 >More info 0.37 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
60 pkl Mutant Uniconazole 0.63 >More info 0.36 >More info pkl Mutant mock Original data GEO bulk
61 35S::Zat12 0.68 >More info 0.31 >More info WT Original data GEO bulk
62 ARR22-ox 0.50 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
63 gun5 control -0.74 >More info -0.24 >More info Col-0 control Original data GEO bulk
64 Imbibed 24 h ABA 30uM (seed) 0.65 >More info 0.32 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
65 rosettes drought 0.57 >More info 0.40 >More info rosettes watered Original data GEO bulk
66 low water potential 0.54 >More info 0.43 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
67 FarRed Light 4 h 0.33 >More info 0.64 >More info White Light 4 h Original data Light treatments
68 ABI3GR +DEX +CHX 0.56 >More info 0.40 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
69 seed germinating in countinuous light 1 h SL 0.65 >More info 0.30 >More info Control for tissue data seed Original data GEO bulk
70 phyABCDE Rc50 -0.59 >More info -0.36 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
71 csn4-1 dark 0.67 >More info 0.27 >More info WT light Original data GEO bulk
72 35:SUB1A 0.60 >More info 0.34 >More info WT whole seedling Original data GEO bulk
73 phyABDE 4-day dark- 2 hours Rc50 0.72 >More info 0.22 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
74 FHY3p dark+DEX -0.61 >More info -0.33 >More info FHY3p dark+mock Original data GEO bulk
75 Glyphosate EC50 0.31 >More info 0.63 >More info Carrier (Glyphosate) Original data GEO bulk
76 seed during stratification 48 h S 0.65 >More info 0.28 >More info Control for tissue data seed Original data GEO bulk
77 C24-30min IAA -0.65 >More info -0.28 >More info C24-0h IAA whole plant Original data GEO bulk
78 max3GR24 (1 uM) 0.52 >More info 0.41 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
79 WT Uniconazole 0.64 >More info 0.28 >More info WT mock Original data GEO bulk
80 tfl1-1-16ºC -0.51 >More info -0.41 >More info WT-16ºC Original data GEO bulk
81 JMJ24 knockout 0.61 >More info 0.31 >More info WT Original data GEO bulk
82 endosperm paclobutrazol 0.68 >More info 0.23 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
83 Blue Light 4 h 0.29 >More info 0.62 >More info White Light 4 h Original data Light treatments
84 CCA14 dark early 0.54 >More info 0.36 >More info Col dark early Original data GEO bulk
85 eif3h non-polysome 0.73 >More info 0.17 >More info WT non-polysome Original data GEO bulk
86 15m light 0.56 >More info 0.33 >More info before light whole seedlings Original data GEO bulk
87 shoot control pRBCS -0.61 >More info -0.28 >More info shoot control total Original data GEO bulk
88 WT cold 0.36 >More info 0.53 >More info WT control All aerial tissue Original data GEO bulk
89 eto1-4 + AVG -0.52 >More info -0.36 >More info eto1-4 whole seedling Original data GEO bulk
90 msg2 0.57 >More info 0.31 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
91 dry seed 0 h 0.65 >More info 0.22 >More info Control for tissue data seed Original data GEO bulk
92 seed during stratification 1 h S 0.65 >More info 0.22 >More info Control for tissue data seed Original data GEO bulk
93 shoot control pSUC2 -0.65 >More info -0.22 >More info shoot control total Original data GEO bulk
94 seed germinating in countinuous light 6 h SL 0.61 >More info 0.25 >More info Control for tissue data seed Original data GEO bulk
95 seed during stratification 12 h S 0.65 >More info 0.21 >More info Control for tissue data seed Original data GEO bulk
96 seed freshly harvested H 0.65 >More info 0.21 >More info Control for tissue data seed Original data GEO bulk
97 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
98 20h Col-0 0.23 >More info 0.63 >More info 00h Col-0 Original data GEO bulk
99 Dark 40 min pls UV-A 5 min 0.50 >More info 0.35 >More info Dark 45 min Original data Light treatments
100 WT Red light 18h -0.64 >More info -0.20 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
101 ahg3-1 0.64 >More info 0.20 >More info ABA control Original data GEO bulk
102 Stem tissue 2 days NAA 0.74 >More info 0.10 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
103 abi3-6 16 DAF Seed -0.59 >More info -0.25 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
104 long 10-degree- 0.30 >More info 0.53 >More info control long Original data GEO bulk
105 atm3 -0.28 >More info -0.55 >More info Col0 whole plant Original data GEO bulk
106 Col0-PsmES4326-24hpi 0.22 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
107 pif3 Dark 1h -0.62 >More info -0.19 >More info WT Dark 1h etiolated seedling Original data GEO bulk
108 Col dryseed 0.62 >More info 0.19 >More info Control for tissue data dry seeds Original data
109 sfr3 control 0.28 >More info 0.53 >More info WT control All aerial tissue Original data GEO bulk
110 csn5 (csn5a-2 csn5b) light 0.60 >More info 0.20 >More info WT light Original data GEO bulk
111 Col-0 (t-zeatin 3 h) 0.25 >More info 0.55 >More info Col-0 Original data Cytokinin treatment of seedlings
112 Seeds stage8 w/o siliques 0.60 >More info 0.19 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
113 lec1-1 Post-Mature Green Seed 0.56 >More info 0.23 >More info Control for tissue data Original data GEO bulk
114 frb1 mutant 0.51 >More info 0.28 >More info WT whole seedling Original data GEO bulk
115 cdpk6-yfp 0.28 >More info 0.51 >More info Kan seedlings Original data GEO bulk
116 abi3-6 12 DAF Seed -0.54 >More info -0.24 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
117 shoot control pCER5 -0.61 >More info -0.17 >More info shoot control total Original data GEO bulk
118 cngc1-3 0.25 >More info 0.53 >More info Col-0 root Original data GEO bulk
119 shoot control pKAT1 -0.57 >More info -0.21 >More info shoot control total Original data GEO bulk
120 PBZ 0.24 >More info 0.53 >More info none PBZ Rosette Original data GEO bulk
121 WT (Col) glucose 0.18 >More info 0.59 >More info WT (Col) glucose seedlings Original data GEO bulk
122 ASL9-ox -0.58 >More info -0.18 >More info WT aerial parts of seedlings Original data GEO bulk
123 C24-3h IAA -0.65 >More info -0.10 >More info C24-0h IAA whole plant Original data GEO bulk
124 12h Col-0 0.23 >More info 0.52 >More info 00h Col-0 Original data GEO bulk
125 35S::PI ap3-3 35S::AP-GR +DEX 0.12 >More info 0.63 >More info 0hr DEX Original data GEO bulk
126 Col BTH 0.07 >More info 0.67 >More info Col rosettes Original data GEO bulk
127 gabaculin -0.58 >More info -0.15 >More info WT Col-0 seedling Original data GEO bulk
128 vte1-1 1d vernalization 0.51 >More info 0.22 >More info WT 1d vernalization Original data GEO bulk
129 sfr6 drought 0.18 >More info 0.55 >More info WT drought All aerial tissue Original data GEO bulk
130 short 12-degree- 0.16 >More info 0.56 >More info control short Original data GEO bulk
131 lec1-1 Mature Green Seed 0.50 >More info 0.22 >More info Control for tissue data Original data GEO bulk
132 seed germinating in countinuous light 12 h SL 0.51 >More info 0.21 >More info Control for tissue data seed Original data GEO bulk
133 root - 04% oxygen - 2h 0.06 >More info 0.66 >More info root - 21% oxygen - 2h Original data GEO bulk
134 low CO2 + dark -0.13 >More info -0.59 >More info normal CO2 + light Original data GEO bulk
135 cct-1 mutant 9-day-old seedlings above-ground
portions		 0.52 >More info 0.19 >More info WT 7-day-old seedlings above-ground portions seedling Original data
136 oas-a1.1 root 0.18 >More info 0.53 >More info WT-Untreated Root Original data GEO bulk
137 dark +H2O2 0.59 >More info 0.11 >More info dark 5 mM H2O2 seedling Original data GEO bulk
138 eto1-4 +370 -0.68 >More info -0.01 >More info eto1-4 whole seedling Original data GEO bulk
139 16h Col-0 0.17 >More info 0.52 >More info 00h Col-0 Original data GEO bulk
140 shoot hypoxia pCER5 -0.51 >More info -0.18 >More info shoot hypoxia total Original data GEO bulk
141 Heat 0.51 >More info 0.18 >More info Control 90 minutes at 38°C. Original data GEO bulk
142 nia1nia2noa1-2 0.51 >More info 0.18 >More info Col-0 whole seedlings Original data GEO bulk
143 Ba1 UV -0.55 >More info -0.13 >More info Ba1 mock UV seedling Original data
144 Leafminer damaged seedlings 0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
145 12h volatiles Sm. R3089 -0.11 >More info -0.56 >More info 12h untreated whole seedling Original data GEO bulk
146 atmyc2 Seedling BL+ABA 0.52 >More info 0.14 >More info WT Seedling BL+ABA Original data GEO bulk
147 Cs shoot -0.16 >More info -0.50 >More info control shoot Original data GEO bulk
148 Full C2 T2 -0.07 >More info -0.59 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
149 short 17-degree- 0.15 >More info 0.50 >More info control short Original data GEO bulk
150 root - 01% oxygen - 48h 0.15 >More info 0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
151 prors1-2 leaves 0.14 >More info 0.51 >More info Col-0 leaves leaves Original data
152 seedling 12h after Gamma atm-1 0.15 >More info 0.50 >More info seedling day 1 unirradiated atm-1 12h Original data
153 gun1-9 control -0.58 >More info -0.07 >More info Col-0 control Original data GEO bulk
154 short 8-degree- 0.10 >More info 0.54 >More info control short Original data GEO bulk
155 WT(Ler) Rc15 0.66 >More info -0.03 >More info WT(Ler) Dark Original data GEO bulk
156 PNO8 12 h 0.01 >More info -0.64 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
157 eto1-4 +393 -0.69 >More info 0.06 >More info eto1-4 whole seedling Original data GEO bulk
158 Col leaf scrape 5 dpi 0.50 >More info 0.12 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
159 WT(Ler) Rc50 0.61 >More info 0.01 >More info WT(Ler) Dark Original data GEO bulk
160 dicamba 0.52 >More info 0.10 >More info WT mock whole seedling Original data GEO bulk
161 35S::MBF1c -0.09 >More info -0.53 >More info control Original data GEO bulk
162 IAA7mII over-expressor IAA Treated -0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
163 pip3 At2g19270 TDNA 9 -0.08 >More info -0.53 >More info Col-0 whole plant Original data GEO bulk
164 Imbibed 24 h ABA 3uM (seed) 0.54 >More info 0.06 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
165 root - 04% oxygen - 48h 0.00 >More info 0.60 >More info root - 21% oxygen - 48h Original data GEO bulk
166 20d after anthesis 0.58 >More info 0.01 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
167 shoot hypoxia pRBCS -0.57 >More info -0.02 >More info shoot hypoxia total Original data GEO bulk
168 ddm1 mutant seedlings 0.62 >More info -0.03 >More info control seedlings 10-day old whole seedling Original data GEO bulk
169 TiO2 germinant -0.53 >More info -0.05 >More info Millipore Water germinant TiO2 seedling Original data
170 WT Rc50 0.60 >More info -0.02 >More info WT Dark red light whole seedling Original data GEO bulk
171 siliques WT hypoxia 0.56 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
172 Heat shock optimum -0.08 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
173 endosperm ABA 0.70 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
174 root - 08% oxygen - 30min -0.00 >More info 0.57 >More info root - 21% oxygen - 30min Original data GEO bulk
175 Col-0 red light -0.56 >More info 0.00 >More info Col-0 dark Original data GEO bulk
176 ABA DFPM 0.51 >More info 0.05 >More info control Original data GEO bulk
177 A6 mutant -0.58 >More info 0.02 >More info WT rosette leaves Rosette leaves Original data GEO bulk
178 bri1-116 -0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
179 eto1-4 +303 -0.53 >More info -0.02 >More info eto1-4 whole seedling Original data GEO bulk
180 pvip1 pvip2 seedling 0.57 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
181 FarRed Light 45min 0.02 >More info -0.57 >More info White Light 45min Original data Light treatments
182 Mutant iaa5_6_19 0.02 >More info 0.52 >More info Col Original data GEO bulk
183 dorn1-1 Root 100 mM ATP 30 min 0.02 >More info 0.51 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
184 myb5 mutant seed -0.54 >More info 0.03 >More info WT seed Original data GEO bulk
185 Mutant cry1 0.51 >More info 0.00 >More info Col-0 Original data GEO bulk
186 WT light -0.53 >More info 0.02 >More info WT dark Original data GEO bulk
187 cry1 low light 0.51 >More info 0.00 >More info Col-O low light Original data GEO bulk
188 6h +Pi -0.59 >More info 0.09 >More info 6h -Pi root Original data GEO bulk
189 low CO2 + light 0.04 >More info -0.54 >More info normal CO2 + light Original data GEO bulk
190 bZIP1ko mutant N+Light- 0.05 >More info -0.53 >More info WT-sib N+Light- whole plant Original data GEO bulk
191 eto1-4 0.68 >More info -0.22 >More info Col-0 whole seedling Original data GEO bulk
192 seedling 24h after Gamma WT -0.06 >More info 0.52 >More info seedling day 2 unirradiated WT 24h Original data
193 CCA1-ox 6am non-polysomal -0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
194 bbx24 in With Light -0.50 >More info 0.10 >More info WT in With Light light seedling Original data
195 +GA-30mins 0.59 >More info -0.19 >More info -30mins whole plant Original data GEO bulk
196 Shoot apex inflorescence (after bolting) -0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
197 cca1-lhy 60m light -0.56 >More info 0.18 >More info 60m light whole seedlings Original data GEO bulk
198 ga1-3 scl3-1 -0.57 >More info 0.21 >More info ga1-3 whole root Original data
199 Fei-0-30min IAA 0.52 >More info -0.19 >More info Fei-0-0h IAA whole plant Original data GEO bulk
200 bbx24 in Simulated Shade -0.62 >More info 0.31 >More info WT in simulated shade shade seedling Original data
201 ABA 0.50 >More info -0.22 >More info control Original data GEO bulk
202 Inflorescences Trp1 -0.28 >More info 0.52 >More info Inflorescences ler inflorescences Original data GEO bulk
203 Blue Light 45 min 0.52 >More info -0.30 >More info White Light 45min Original data Light treatments