4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on embryo ABA
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "embryo ABA"  Help Download transcriptome of top 30
Score Experiment Correlation from
embryo ABA		 Correlation to
embryo ABA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 embryo ABA 1.00 >More info 1.00 >More info embryo-control ABA embryo Original data GEO bulk
2 embryo paclobutrazol 0.94 >More info 0.90 >More info embryo-control paclobutrazol embryo Original data GEO bulk
3 ahg1-1 0.78 >More info 0.82 >More info ABA control Original data GEO bulk
4 Imbibed 24 h ABA 30uM (seed) 0.76 >More info 0.81 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
5 ABA control 0.72 >More info 0.84 >More info No ABA control Original data GEO bulk
6 GA4 3 h (ga1 seed) 0.81 >More info 0.75 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
7 24h SL WT -0.74 >More info -0.75 >More info 0 h WT seed Original data
8 24h SL Attim 17-1 1 -0.72 >More info -0.73 >More info 0 h Attim 17-1 1 seed Original data
9 clf-28 swn-7 0.73 >More info 0.68 >More info Col whole plant Original data GEO bulk
10 abi3-6 16 DAF Seed -0.69 >More info -0.72 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
11 phyABCDE Dark 0.68 >More info 0.72 >More info WT Dark Dark whole seedling Original data GEO bulk
12 endosperm paclobutrazol 0.74 >More info 0.60 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
13 vte1-1 1d vernalization 0.62 >More info 0.69 >More info WT 1d vernalization Original data GEO bulk
14 fus3-3 12 DAF Seed -0.64 >More info -0.60 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
15 gul2-1 mutant 0.67 >More info 0.57 >More info WT 7 day-old whole seedlings Original data
16 etiolated atbzip16 0.59 >More info 0.64 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
17 rosettes myoox drought 0.55 >More info 0.67 >More info rosettes myoox watered Original data GEO bulk
18 estradiol induced LEC1 0.53 >More info 0.69 >More info control Original data GEO bulk
19 Estradiol4 days 0.53 >More info 0.69 >More info Col Original data GEO bulk
20 phyABDE Dark 0.57 >More info 0.64 >More info WT Dark Dark whole seedling Original data GEO bulk
21 Phytoprostane A1 4 h 0.56 >More info 0.64 >More info Col-0 Original data GEO bulk
22 Col-0 red light -0.63 >More info -0.56 >More info Col-0 dark Original data GEO bulk
23 rosettes WT drought 0.56 >More info 0.63 >More info rosettes WT watered Original data GEO bulk
24 Fenclorim 24hr 0.60 >More info 0.58 >More info Acetone 24hr root Original data GEO bulk
25 root endodermis and quiescent center 40 mM NaCl 0.45 >More info 0.72 >More info root endodermis and quiescent center Original data GEO bulk
26 6h +Pi -0.64 >More info -0.52 >More info 6h -Pi root Original data GEO bulk
27 seed during stratification 1 h S 0.67 >More info 0.49 >More info Control for tissue data seed Original data GEO bulk
28 Fenclorim 4hr 0.58 >More info 0.58 >More info Acetone 4hr root Original data GEO bulk
29 Ws seedlings 0.52 >More info 0.63 >More info ged1 seedlings Original data GEO bulk
30 ged1 seedlings -0.52 >More info -0.63 >More info Ws seedlings Original data GEO bulk
31 seed during stratification 12 h S 0.67 >More info 0.47 >More info Control for tissue data seed Original data GEO bulk
32 Heat 0.57 >More info 0.57 >More info Control 90 minutes at 38°C. Original data GEO bulk
33 AgNO3 3 h 0.43 >More info 0.71 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
34 5-Triiodobenzoic acid3 h 0.46 >More info 0.67 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
35 6 h SL WT -0.55 >More info -0.58 >More info 0 h WT seed Original data
36 ABA DFPM 0.58 >More info 0.55 >More info control Original data GEO bulk
37 6 h SL Attim 17-1 1 -0.55 >More info -0.58 >More info 0 h Attim 17-1 1 seed Original data
38 toc1-1-53hr 0.43 >More info 0.69 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
39 seed freshly harvested H 0.67 >More info 0.44 >More info Control for tissue data seed Original data GEO bulk
40 bak1-3 +Pep2 10h 0.50 >More info 0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
41 phyABCDE Rc50 -0.54 >More info -0.56 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
42 dry seed 0 h 0.66 >More info 0.44 >More info Control for tissue data seed Original data GEO bulk
43 mdh 0.49 >More info 0.61 >More info Col Original data GEO bulk
44 Imbibed 24 h ABA 3uM (seed) 0.65 >More info 0.43 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
45 Heat and anoxia 0.52 >More info 0.56 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
46 dicamba 0.54 >More info 0.54 >More info WT mock whole seedling Original data GEO bulk
47 CMP 24hr 0.49 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
48 Osmotic Stress 24 h (shoot) 0.52 >More info 0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
49 TNT-seedlings 0.39 >More info 0.67 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
50 piffq 2d WL 0.40 >More info 0.66 >More info WT 2d WL whole seedling Original data GEO bulk
51 bbx24 in Simulated Shade -0.49 >More info -0.57 >More info WT in simulated shade shade seedling Original data
52 csn5 (csn5a-2 csn5b) light 0.63 >More info 0.42 >More info WT light Original data GEO bulk
53 csn4-1 dark 0.64 >More info 0.41 >More info WT light Original data GEO bulk
54 hai1-2 low water potential 0.46 >More info 0.58 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
55 Sulfometuron EC50 0.47 >More info 0.56 >More info Carrier Original data GEO bulk
56 rosettes drought 0.50 >More info 0.52 >More info rosettes watered Original data GEO bulk
57 abi3-6 12 DAF Seed -0.41 >More info -0.61 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
58 48 h S Attim 17-1 1 -0.50 >More info -0.51 >More info 0 h Attim 17-1 1 seed Original data
59 lec1-1 12 DAF Seed -0.52 >More info -0.49 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
60 35S::Zat12+H2O2 0.50 >More info 0.51 >More info WT+H2O2 H2O2 Original data GEO bulk
61 toc1-1-77hr 0.46 >More info 0.55 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
62 siliques AtHb1 control 0.49 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
63 Col-0 under 4 days salt 0.49 >More info 0.52 >More info Col-0 under control 4 days salt treatment rosette Original data
64 4d red light grown hmr-5 seedlings 0.53 >More info 0.47 >More info 4d red light grown WT(Col-0) seedlings Original data
65 9 hr Hypoxia Total RNA 0.49 >More info 0.51 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
66 hira-root -0.43 >More info -0.57 >More info WT-root root Original data
67 WT (Col-0) inflorescence drought day 10 0.50 >More info 0.49 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
68 ARF10 -0.62 >More info -0.37 >More info Col-0 Original data GEO bulk
69 vtc2 day 7 induction -0.58 >More info -0.41 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
70 35S-MIF1 light grown 0.45 >More info 0.54 >More info Light-grown WT control Original data GEO bulk
71 toc1-1-73hr 0.30 >More info 0.69 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
72 CMP 4hr 0.45 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
73 Whole root - low pH 12H 0.40 >More info 0.59 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
74 Col dryseed 0.61 >More info 0.37 >More info Control for tissue data dry seeds Original data
75 plant (tga2-5-6) 4h phytoprostane A1 0.35 >More info 0.63 >More info plant (tga2-5-6) 4h control Original data GEO bulk
76 plant (Col-0) 4h phytoprostane A1 0.46 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
77 rosettes atx drought 0.44 >More info 0.54 >More info rosettes atx watered Original data GEO bulk
78 2h KNO3 Whole root -0.48 >More info -0.50 >More info 2h KCl control Whole root Whole root Original data GEO bulk
79 gul2-1 bri1-5 mutant 0.48 >More info 0.50 >More info WT 7 day-old whole seedlings Original data
80 Cocultivation 8 hrs root 0.45 >More info 0.53 >More info Mock cocultivation 8 hrs root Root Original data
81 DFPM 0.50 >More info 0.47 >More info control Original data GEO bulk
82 9 hr Hypoxia 1 hr recovery Total RNA 0.43 >More info 0.54 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
83 Seedling-HeatStressed TOTALmRNA 0.43 >More info 0.54 >More info Seedling-control TOTALmRNA seedling Original data
84 Chitosan 3h Treatment 0.51 >More info 0.45 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
85 Col-0 37C 0.46 >More info 0.50 >More info Col-0 22C Original data GEO bulk
86 root longitudinal zone-4 NaCl 0.42 >More info 0.53 >More info root longitudinal zone-4 Original data GEO bulk
87 Ws HS 0.43 >More info 0.51 >More info Ws control heat shocked seedling Original data GEO bulk
88 root columella root cap 40 mM NaCl 0.44 >More info 0.50 >More info root columella root cap Original data GEO bulk
89 dark-hs 0.44 >More info 0.50 >More info dark-control seedling Original data
90 Laer treat paclobutrazol (PAC) 0.39 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
91 Col0-PsmES4326-24hpi 0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
92 Col-0 leaf drought 0.42 >More info 0.51 >More info Col-0 leaf water leaf Original data GEO bulk
93 csn3-1 light 0.54 >More info 0.38 >More info WT light Original data GEO bulk
94 ACN1-2 Sucrose -0.38 >More info -0.54 >More info Col-7 Sucrose Original data GEO bulk
95 aox1a(line) MLD stressed 0.39 >More info 0.53 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
96 toc1-1-85hr 0.31 >More info 0.61 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
97 Col-0 HS 0.41 >More info 0.51 >More info Col-0 control heat shocked seedling Original data GEO bulk
98 WT (Col-0) heat shock 0.41 >More info 0.51 >More info WT (Col-0) whole seedling Original data GEO bulk
99 whole roots 140 mM NaCl 1 hour 0.41 >More info 0.51 >More info whole roots standard Original data GEO bulk
100 Imidazolinone EC50 0.42 >More info 0.50 >More info Carrier (Imidazolinone) Original data GEO bulk
101 pab polysome 0.31 >More info 0.61 >More info WT polysome seedling shoot/aerial seedling Original data
102 9m.KCl 0.41 >More info 0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
103 Fe starvation 72 h 0.39 >More info 0.51 >More info Control Original data GEO bulk
104 whole roots -Fe 72 hour 0.39 >More info 0.51 >More info whole roots standard Original data GEO bulk
105 bri1-116 0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
106 Seedling-HeatStressed POLYSOMESmRNA 0.39 >More info 0.51 >More info Seedling-control POLYSOMESmRNA seedling Original data
107 pil5 red light 0.55 >More info 0.34 >More info Col-0 red light Original data GEO bulk
108 Chemically 0.24 >More info 0.65 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
109 Mutant axr3-1 0.26 >More info 0.62 >More info Col Original data GEO bulk
110 whole roots -Fe 48 hour 0.36 >More info 0.52 >More info whole roots standard Original data GEO bulk
111 seed during stratification 48 h S 0.57 >More info 0.31 >More info Control for tissue data seed Original data GEO bulk
112 pif3 Dark 1h -0.50 >More info -0.37 >More info WT Dark 1h etiolated seedling Original data GEO bulk
113 Root -K 0.37 >More info 0.50 >More info Control-root Original data GEO bulk
114 seed germinating in countinuous light 1 h SL 0.58 >More info 0.29 >More info Control for tissue data seed Original data GEO bulk
115 DUO1 induced 12h 0.31 >More info 0.55 >More info 12hr-not-induced whole plant Original data GEO bulk
116 SA 4mM 0.32 >More info 0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
117 Cor 10h 0.34 >More info 0.52 >More info Mock 10h Cor Original data GEO bulk
118 inhibitor A Treated 0.35 >More info 0.51 >More info Negative Control Original data GEO bulk
119 Laer pretreat GA Flg22 1h 0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
120 rpoTmp(line) MLD stressed 0.35 >More info 0.51 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
121 atmyc2 cop1 Seedling BL 0.34 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
122 35S:RPS4 eds1-2 24h -0.34 >More info -0.51 >More info 35S:RPS4 24h leaves Original data
123 cop1 Seedling BL+ABA 0.52 >More info 0.32 >More info WT Seedling BL+ABA Original data GEO bulk
124 WT H2O2 3h 0.30 >More info 0.54 >More info WT water 3h 3h_H2O2 Original data GEO bulk
125 Col BTH 0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
126 35S::Zat12 0.31 >More info 0.52 >More info WT Original data GEO bulk
127 seed germinating in countinuous light 48 h SL -0.57 >More info -0.26 >More info Control for tissue data seed Original data GEO bulk
128 Seeds stage8 w/o siliques 0.53 >More info 0.29 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 glk1 glk2 GLK1-GR +DEX 24h -0.29 >More info -0.53 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
130 whole roots -Fe 6 hour 0.28 >More info 0.53 >More info whole roots standard Original data GEO bulk
131 Shoot -Cs 0.28 >More info 0.53 >More info Control-shoot Original data GEO bulk
132 IAA/inhibitor B Treated 0.29 >More info 0.51 >More info IAA Treated Original data GEO bulk
133 DUO1 induced 24h 0.29 >More info 0.51 >More info 24hr-not-induced whole plant Original data GEO bulk
134 ABI3GR +DEX +CHX 0.24 >More info 0.56 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
135 Primisulfuron EC50 0.29 >More info 0.51 >More info Carrier (primisulfuron) Original data GEO bulk
136 Dark 4 h pls RedLight 1min -0.25 >More info -0.54 >More info Dark 4 h Original data Light treatments
137 Mutant axr3-1 (IAA) 0.20 >More info 0.59 >More info Col (IAA) Original data GEO bulk
138 ahg3-1 0.58 >More info 0.21 >More info ABA control Original data GEO bulk
139 Leafminer damaged seedlings 0.22 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
140 Dark 4 h pls UV-A 5 min -0.21 >More info -0.56 >More info Dark 4 h Original data Light treatments
141 Hypoxic e1 ate -0.25 >More info -0.51 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
142 MPK6 ox Shoot Hypoxia -0.22 >More info -0.53 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
143 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
144 bZIP1ko mutant N+Light- 0.20 >More info 0.53 >More info WT-sib N+Light- whole plant Original data GEO bulk
145 roottip hypoxia total 0.19 >More info 0.50 >More info roottip control total Original data GEO bulk
146 dsr1 -0.18 >More info -0.51 >More info WT mock Whole seedling Original data GEO bulk
147 DUO1 induced 6h 0.09 >More info 0.59 >More info 6hr-not-induced whole plant Original data GEO bulk
148 Heat shock optimum 0.02 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
149 long 17-degree- 0.10 >More info 0.53 >More info control long Original data GEO bulk
150 CeO2 germinant -0.13 >More info -0.50 >More info Millipore Water germinant CeO2 seedling Original data
151 endosperm ABA 0.75 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
152 Red/FR Light45min 0.12 >More info 0.50 >More info FarRed Light 45min Original data Light treatments
153 FarRed Light 45min -0.07 >More info -0.51 >More info White Light 45min Original data Light treatments
154 shoots bhlh100/101 100uM Fe 0.04 >More info -0.61 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
155 A. halleri highZn-leaf -0.03 >More info 0.60 >More info A. petraea highZn-leaf Original data GEO bulk
156 akt1-1 0.04 >More info 0.50 >More info Ws-2 Seedlings Original data GEO bulk
157 2hr continuous KNO3 ECR cell -0.03 >More info 0.54 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
158 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
159 Shoot apex inflorescence (after bolting) -0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
160 miR PSTDC3000 24h -0.16 >More info 0.51 >More info Col PSTDC3000 24h Leaf Original data GEO bulk
161 4d red light grown hmr-22 seedlings 0.55 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
162 seed germinating in countinuous light 24h SL -0.34 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk