seed during stratification 12 h S

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on seed during stratification 12 h S

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List of experiments correlated with "seed during stratification 12 h S"

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Score	Experiment	Correlation from seed during stratification 12 h S	Correlation to seed during stratification 12 h S	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	seed during stratification 12 h S	1.00 >More info	1.00 >More info	Control for tissue data		seed	Original data	GEO bulk
2	seed during stratification 1 h S	0.95 >More info	0.97 >More info	Control for tissue data		seed	Original data	GEO bulk
3	seed freshly harvested H	0.95 >More info	0.96 >More info	Control for tissue data		seed	Original data	GEO bulk
4	dry seed 0 h	0.94 >More info	0.96 >More info	Control for tissue data		seed	Original data	GEO bulk
5	Col dryseed	0.93 >More info	0.93 >More info	Control for tissue data		dry seeds	Original data
6	seed during stratification 48 h S	0.91 >More info	0.92 >More info	Control for tissue data		seed	Original data	GEO bulk
7	Seeds stage8 w/o siliques	0.91 >More info	0.91 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
8	seed germinating in countinuous light 1 h SL	0.91 >More info	0.91 >More info	Control for tissue data		seed	Original data	GEO bulk
9	seed germinating in countinuous light 6 h SL	0.89 >More info	0.91 >More info	Control for tissue data		seed	Original data	GEO bulk
10	lec1-1 Post-Mature Green Seed	0.89 >More info	0.89 >More info	Control for tissue data			Original data	GEO bulk
11	seed germinating in countinuous light 12 h SL	0.87 >More info	0.90 >More info	Control for tissue data		seed	Original data	GEO bulk
12	lec1-1 Mature Green Seed	0.87 >More info	0.89 >More info	Control for tissue data			Original data	GEO bulk
13	Callus	0.86 >More info	0.88 >More info	Control for tissue data		callus	Original data	GEO bulk
14	Leaf	0.87 >More info	0.86 >More info	Control for tissue data		leaf	Original data	GEO bulk
15	Petals stage15	0.86 >More info	0.87 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
16	Mature roots	0.85 >More info	0.88 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
17	median nectary stage 14-15	0.86 >More info	0.87 >More info	Control for tissue data		median nectaries	Original data	GEO bulk
18	seed germinating in countinuous light 48 h SL	0.85 >More info	0.88 >More info	Control for tissue data		seed	Original data	GEO bulk
19	lateral nectary stage 14-15	0.86 >More info	0.87 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
20	Senescing leaf	0.86 >More info	0.87 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
21	lateral nectary stage 11-12	0.86 >More info	0.86 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
22	Petiol (leaf7)	0.86 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
23	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (8 dpg)	0.84 >More info	0.88 >More info	Control for tissue data			Original data	GEO bulk
24	lec1-1 Cotyledon Stage Seed	0.85 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
25	Root from tip to 130 mm proximal to tip (cut 4dpg)	0.84 >More info	0.88 >More info	Control for tissue data			Original data	GEO bulk
26	Sepals stage15	0.86 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
27	WT cotyledons	0.85 >More info	0.87 >More info	Control for tissue data		cotyledons	Original data
28	Root from tip to 130 mm proximal to tip (cut 8dpg)	0.84 >More info	0.88 >More info	Control for tissue data			Original data	GEO bulk
29	Shoot apex vegetative	0.85 >More info	0.87 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
30	Ambient CO2 fully expanded leaf	0.86 >More info	0.86 >More info	Control for tissue data		fully expanded leaf	Original data
31	Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)	0.84 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
32	Apex 5DAS	0.85 >More info	0.86 >More info	Control for tissue data			Original data	GEO bulk
33	Stem 1st node	0.85 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
34	Cotyledons	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
35	lec1-1 24h post-fertilization Seed	0.85 >More info	0.86 >More info	Control for tissue data			Original data	GEO bulk
36	KAN1	0.85 >More info	0.86 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
37	Flowers stage15	0.85 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
38	Shoot apex vegetative &Young leaves	0.85 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
39	LAS	0.84 >More info	0.87 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
40	Distal half (leaf7)	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
41	Rosette leaf No12	0.85 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
42	Stem 2ndinternode	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
43	ML (Mature leaves) 35DAS	0.86 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
44	Proximalhalf (leaf7)	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
45	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg)	0.84 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
46	Expanding leaf	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
47	silique	0.85 >More info	0.86 >More info	Control for tissue data		silique	Original data	GEO bulk
48	Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)	0.84 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
49	Rosette leaf No2	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
50	unpollinated pistil	0.85 >More info	0.86 >More info	Control for tissue data		pistil	Original data	GEO bulk
51	Atape2 low light	0.84 >More info	0.87 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
52	Section Root from70 mm to 340 mm harvested immediately	0.84 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
53	HDG4	0.84 >More info	0.87 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
54	Shoot apex transition (before bolting)	0.84 >More info	0.87 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
55	S17	0.85 >More info	0.86 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
56	Cauline leaves	0.86 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
57	Regenerating Stump Root Tip Cut 130 mm andn Recut 5 hrs Taking 70 mm of Stump (4dpg)	0.84 >More info	0.87 >More info	Control for tissue data			Original data	GEO bulk
58	torpedo-basal	0.84 >More info	0.87 >More info	Control for tissue data		torpedo embryo basal tissue	Original data	GEO bulk
59	Ambient CO2 leaf primordia	0.84 >More info	0.86 >More info	Control for tissue data		leaf primordia	Original data
60	Inflorescences ler	0.84 >More info	0.86 >More info	Control for tissue data		inflorescences	Original data	GEO bulk
61	root hair	0.85 >More info	0.85 >More info	Control for tissue data		root hairs	Original data	GEO bulk
62	Carpels stage15	0.84 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
63	differentiating xylem	0.85 >More info	0.85 >More info	Control for tissue data		xylem	Original data	GEO bulk
64	in vivo pollen tube	0.84 >More info	0.86 >More info	Control for tissue data		pollen tube	Original data	GEO bulk
65	lec1-1 Globular Stage Seed	0.84 >More info	0.86 >More info	Control for tissue data			Original data	GEO bulk
66	ovule	0.84 >More info	0.86 >More info	Control for tissue data		ovule	Original data	GEO bulk
67	Pedicels stage15	0.85 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
68	Hypocotyl	0.85 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
69	flower	0.85 >More info	0.85 >More info	Control for tissue data		flower	Original data	GEO bulk
70	Flower (stage12)	0.84 >More info	0.86 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
71	seedling	0.84 >More info	0.86 >More info	Control for tissue data		seedling	Original data	GEO bulk
72	AtHB8	0.84 >More info	0.86 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
73	Anther	0.84 >More info	0.86 >More info	Control for tissue data		anther	Original data
74	HMG	0.84 >More info	0.86 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
75	Ambient CO2 expanding leaf	0.85 >More info	0.85 >More info	Control for tissue data		expanding leaf	Original data
76	mature endodermis glcal	0.84 >More info	0.85 >More info	Control for tissue data		endodermis	Original data	GEO bulk
77	Bud	0.84 >More info	0.85 >More info	Control for tissue data		pollen grains and tubes	Original data
78	Nuclei suspensor	0.83 >More info	0.86 >More info	Control for tissue data		suspensor	Original data
79	chalazal endosperm mature green	0.84 >More info	0.85 >More info	Control for tissue data		chalazal endosperm captured by LCM	Original data	GEO bulk
80	torpedo-meristem	0.84 >More info	0.85 >More info	Control for tissue data		torpedo embryo meristem tissue	Original data	GEO bulk
81	embryo proper mature green	0.84 >More info	0.85 >More info	Control for tissue data		embryo proper captured by LCM	Original data	GEO bulk
82	cortex	0.84 >More info	0.85 >More info	Control for tissue data		cortex	Original data	GEO bulk
83	EL (leaves 1-2) 14DAS	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
84	Stamen stage15	0.85 >More info	0.84 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
85	Seeds stage3 with siliques	0.84 >More info	0.85 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
86	leaf	0.85 >More info	0.84 >More info	Control for tissue data		leaf	Original data	GEO bulk
87	phloem sieve cells and companion cells	0.84 >More info	0.85 >More info	Control for tissue data		phloem	Original data	GEO bulk
88	Nuclei proembryo	0.83 >More info	0.86 >More info	Control for tissue data		proembryo	Original data
89	Apex 14DAS	0.85 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
90	Cells whole embryo	0.83 >More info	0.86 >More info	Control for tissue data		whole embryo	Original data
91	heart-stage-root	0.83 >More info	0.86 >More info	Control for tissue data			Original data	GEO bulk
92	micropylar endosperm mature green	0.84 >More info	0.85 >More info	Control for tissue data		micropylar endosperm captured by LCM	Original data	GEO bulk
93	whole seeds mature green	0.84 >More info	0.85 >More info	Control for tissue data		whole seeds captured by LCM	Original data	GEO bulk
94	siliques	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
95	flowers	0.84 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
96	peripheral endosperm mature green	0.83 >More info	0.85 >More info	Control for tissue data		peripherial endosperm captured by LCM	Original data	GEO bulk
97	flower-buds	0.84 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
98	chalazal seed coat mature green	0.84 >More info	0.84 >More info	Control for tissue data		chalazal seed coat captured by LCM	Original data	GEO bulk
99	globular-apical	0.83 >More info	0.85 >More info	Control for tissue data		globular embryo apical tissue	Original data	GEO bulk
100	globular-basal	0.83 >More info	0.85 >More info	Control for tissue data		globular embryo basal tissue	Original data	GEO bulk
101	heart-stage-cotyledon	0.83 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
102	pericycle control	0.82 >More info	0.85 >More info	Control for tissue data	mock	pericycle	Original data	GEO bulk
103	chalazal seed coat	0.83 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
104	embryo proper heart stage	0.81 >More info	0.86 >More info	Control for tissue data		embryo proper captured by LCM	Original data	GEO bulk
105	seed coat mature green	0.84 >More info	0.83 >More info	Control for tissue data		seed coat captured by LCM	Original data	GEO bulk
106	embryo proper	0.82 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
107	chalazal endosperm	0.81 >More info	0.85 >More info	Control for tissue data			Original data	GEO bulk
108	micropylar endosperm heart stage	0.81 >More info	0.85 >More info	Control for tissue data		micropylar endosperm captured by LCM	Original data	GEO bulk
109	torpedo-root	0.83 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
110	whole seeds	0.82 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
111	peripheral endosperm heart stage	0.82 >More info	0.84 >More info	Control for tissue data		peripheral endosperm captured by LCM	Original data	GEO bulk
112	B5 +AA	-0.83 >More info	-0.83 >More info	B5 -AA	B5 media and treated with AA		Original data
113	peripherial endosperm	0.82 >More info	0.84 >More info	Control for tissue data			Original data	GEO bulk
114	whole seeds heart stage	0.82 >More info	0.84 >More info	Control for tissue data		whole seeds captured by LCM	Original data	GEO bulk
115	Mature pollen	0.84 >More info	0.82 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
116	intact root control	0.82 >More info	0.84 >More info	Control for tissue data	mock	whole root	Original data	GEO bulk
117	seed coat	0.83 >More info	0.83 >More info	Control for tissue data			Original data	GEO bulk
118	pollen	0.83 >More info	0.82 >More info	Control for tissue data		pollen grain	Original data	GEO bulk
119	QC	0.81 >More info	0.84 >More info	Control for tissue data		FACS-sorted protoplasts from roots	Original data
120	epidermis control	0.81 >More info	0.84 >More info	Control for tissue data	mock	epidermis	Original data	GEO bulk
121	seed coat heart stage	0.82 >More info	0.83 >More info	Control for tissue data		seed coat captured by LCM	Original data	GEO bulk
122	NAA +AA	-0.83 >More info	-0.82 >More info	NAA -AA	B5 media supplemented with 4.5 µM NAA and treated with AA		Original data
123	in vitro pollen tube	0.83 >More info	0.81 >More info	Control for tissue data		pollen tube	Original data
124	chalazal endosperm heart stage	0.81 >More info	0.82 >More info	Control for tissue data		chalazal endosperm captured by LCM	Original data	GEO bulk
125	Emwa1 inoculated psk 3 dpi	0.83 >More info	0.80 >More info	Emwa1 inoculated WT 3 dpi		Cotyledons	Original data	GEO bulk
126	pskr1-5	0.82 >More info	0.79 >More info	wild type		Cotyledons	Original data	GEO bulk
127	L17 phyA line	-0.83 >More info	-0.76 >More info	WT		seedling	Original data	GEO bulk
128	seed germinating in countinuous light 24h SL	0.85 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
129	Shoot apex inflorescence (after bolting)	0.84 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
130	Salicylic Acid 3 h	-0.83 >More info	-0.54 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
131	chalazal seed coat heart stage	0.82 >More info	0.35 >More info	Control for tissue data		chalazal seed coat captured by LCM	Original data	GEO bulk
132	embryo ABA	0.47 >More info	0.67 >More info	embryo-control	ABA	embryo	Original data	GEO bulk
133	ahg1-1	0.40 >More info	0.72 >More info	ABA control			Original data	GEO bulk
134	embryo paclobutrazol	0.47 >More info	0.64 >More info	embryo-control	paclobutrazol	embryo	Original data	GEO bulk
135	ABA control	0.32 >More info	0.78 >More info	No ABA control			Original data	GEO bulk
136	clf-28 swn-7	0.43 >More info	0.58 >More info	Col		whole plant	Original data	GEO bulk
137	phyABCDE Dark	0.29 >More info	0.71 >More info	WT Dark	Dark	whole seedling	Original data	GEO bulk
138	GA4 3 h (ga1 seed)	0.38 >More info	0.60 >More info	Mock 3 h			Original data	Effect of gibberellin during seed imbibition
139	Imbibed 24 h ABA 30uM (seed)	0.36 >More info	0.61 >More info	Imbibed 24 h (seed)			Original data	Effect of ABA during seed imbibition
140	fri-flc	0.31 >More info	0.65 >More info	WT			Original data	GEO bulk
141	Col BTH	0.27 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
142	torpedo-apical	0.83 >More info	0.11 >More info	Control for tissue data		torpedo embryo apical tissue	Original data	GEO bulk
143	Nuclei whole embryo	0.83 >More info	0.10 >More info	Control for tissue data		whole embryo	Original data
144	gul2-1 bri1-5 mutant	0.36 >More info	0.57 >More info	WT		7 day-old whole seedlings	Original data
145	gul2-1 mutant	0.34 >More info	0.59 >More info	WT		7 day-old whole seedlings	Original data
146	ACN1-2	-0.32 >More info	-0.54 >More info	col-7			Original data	GEO bulk
147	piffq 2d WL	0.21 >More info	0.65 >More info	WT 2d WL		whole seedling	Original data	GEO bulk
148	columella control	0.81 >More info	0.04 >More info	Control for tissue data	mock	columella	Original data	GEO bulk
149	erf104-ko Flg22 4h	-0.56 >More info	-0.28 >More info	erf104-ko H2O 4h			Original data	GEO bulk
150	Cs root	-0.31 >More info	-0.53 >More info	control root			Original data	GEO bulk
151	24h SL WT	-0.26 >More info	-0.58 >More info	0 h WT		seed	Original data
152	red illumination +lincomycin	0.29 >More info	0.54 >More info	red illumination -lincomycin			Original data	GEO bulk
153	phyABDE Dark	0.20 >More info	0.62 >More info	WT Dark	Dark	whole seedling	Original data	GEO bulk
154	24h SL Attim 17-1 1	-0.23 >More info	-0.59 >More info	0 h Attim 17-1 1		seed	Original data
155	Starch sheath 2 days NAA	0.53 >More info	0.27 >More info	Starch sheath T0	Stem starch sheath under NAA in vitro treatment before cell divission	laser capture microdissection	Original data	GEO bulk
156	ACN1-2 Sucrose	-0.22 >More info	-0.58 >More info	Col-7 Sucrose			Original data	GEO bulk
157	abi3-6 16 DAF Seed	-0.20 >More info	-0.59 >More info	WT (Col-0) 16 DAF Seed		developing seeds dissected from sliques	Original data
158	Heat shock optimum	0.13 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
159	TNT-seedlings	0.24 >More info	0.52 >More info	DMF-control-seedlings	TNT-treated-seedlings	whole plant	Original data	GEO bulk
160	siliques AtHb1 control	0.23 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
161	torpedo-cotyledon	0.83 >More info	-0.09 >More info	Control for tissue data			Original data	GEO bulk
162	met1-3 fourth-selfed generation	-0.19 >More info	-0.54 >More info	Col WT		leaf	Original data	GEO bulk
163	ged1 seedlings	-0.20 >More info	-0.52 >More info	Ws seedlings			Original data	GEO bulk
164	Ws seedlings	0.20 >More info	0.52 >More info	ged1 seedlings			Original data	GEO bulk
165	24h light (+Lincomycin)	0.50 >More info	0.21 >More info	24h light (-Lincomycin)		seedlings	Original data	GEO bulk
166	Cocultivation 8 hrs leaf	0.54 >More info	0.16 >More info	Mock cocultivation 8 hrs leaf		Leaf	Original data
167	Leafminer damaged seedlings	0.13 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
168	ANAC102 knock-out low oxygen	-0.15 >More info	-0.53 >More info	Col-0 low oxygen			Original data	GEO bulk
169	4xX2x interploidy cross	0.13 >More info	0.55 >More info	2xX2x cross			Original data	GEO bulk
170	bri1-116	-0.05 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
171	Col0-PsmES4326-24hpi	0.06 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
172	dsr1	-0.10 >More info	-0.57 >More info	WT mock		Whole seedling	Original data	GEO bulk
173	Stem tissue 2 days NAA	0.52 >More info	0.14 >More info	Stem tissue T0	Stem tissue with NAA treatment	Stem tissue with NAA treatment	Original data	GEO bulk
174	3 hour 5929745	-0.50 >More info	-0.15 >More info	3 hour control (no chemical )			Original data	GEO bulk
175	FarRed Light 45min	-0.06 >More info	-0.55 >More info	White Light 45min			Original data	Light treatments
176	Laer pretreat GA Flg22 1h	-0.11 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
177	4C 1h	0.04 >More info	0.50 >More info	4C 0h			Original data	GEO bulk
178	pab polysome	-0.01 >More info	0.55 >More info	WT polysome		seedling shoot/aerial seedling	Original data
179	Ibuprofen 3 h	0.00 >More info	0.51 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
180	Imbibed 1 h (seed)	0.00 >More info	0.50 >More info	Dry seed			Original data	Time course of early seed germination
181	NJ15	0.00 >More info	0.50 >More info	mock	sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates	Seedlings	Original data
182	CCA1-ox 6am non-polysomal	-0.01 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
183	ABI3GR +DEX +CHX	-0.04 >More info	0.53 >More info	ABI3GR -DEX +CHX	DEX CHX	root/protoplasts	Original data	GEO bulk
184	IAA7mII over-expressor IAA Treated	-0.25 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk