4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on silique
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List of experiments correlated with "silique"  Help Download transcriptome of top 30
Score Experiment Correlation from
silique		 Correlation to
silique		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 silique 1.00 >More info 1.00 >More info Control for tissue data silique Original data GEO bulk
2 unpollinated pistil 0.93 >More info 0.93 >More info Control for tissue data pistil Original data GEO bulk
3 Stem 1st node 0.93 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
4 Pedicels stage15 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
5 flower 0.93 >More info 0.92 >More info Control for tissue data flower Original data GEO bulk
6 Seeds stage3 with siliques 0.92 >More info 0.93 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
7 lec1-1 Globular Stage Seed 0.91 >More info 0.93 >More info Control for tissue data Original data GEO bulk
8 Stem 2ndinternode 0.92 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
9 leaf 0.92 >More info 0.92 >More info Control for tissue data leaf Original data GEO bulk
10 seedling 0.92 >More info 0.92 >More info Control for tissue data seedling Original data GEO bulk
11 siliques 0.92 >More info 0.92 >More info Control for tissue data Original data GEO bulk
12 Carpels stage15 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
13 Shoot apex vegetative &Young leaves 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
14 ovule 0.91 >More info 0.92 >More info Control for tissue data ovule Original data GEO bulk
15 Rosette leaf No12 0.91 >More info 0.92 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
16 lec1-1 Cotyledon Stage Seed 0.91 >More info 0.92 >More info Control for tissue data Original data GEO bulk
17 Expanding leaf 0.92 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
18 Apex 5DAS 0.91 >More info 0.91 >More info Control for tissue data Original data GEO bulk
19 Inflorescences ler 0.91 >More info 0.91 >More info Control for tissue data inflorescences Original data GEO bulk
20 Flowers stage15 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
21 Petiol (leaf7) 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
22 Proximalhalf (leaf7) 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 Flower (stage12) 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
24 Apex 14DAS 0.91 >More info 0.91 >More info Control for tissue data Original data GEO bulk
25 Shoot apex vegetative 0.91 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
26 Ambient CO2 fully expanded leaf 0.91 >More info 0.91 >More info Control for tissue data fully expanded leaf Original data
27 flowers 0.91 >More info 0.91 >More info Control for tissue data Original data GEO bulk
28 Cotyledons 0.91 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
29 flower-buds 0.91 >More info 0.90 >More info Control for tissue data Original data GEO bulk
30 Distal half (leaf7) 0.91 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
31 Hypocotyl 0.91 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
32 WT cotyledons 0.91 >More info 0.90 >More info Control for tissue data cotyledons Original data
33 Rosette leaf No2 0.91 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
34 Shoot apex transition (before bolting) 0.90 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
35 Cauline leaves 0.90 >More info 0.91 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
36 Ambient CO2 leaf primordia 0.90 >More info 0.90 >More info Control for tissue data leaf primordia Original data
37 Bud 0.89 >More info 0.91 >More info Control for tissue data pollen grains and tubes Original data
38 Petals stage15 0.90 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
39 lateral nectary stage 11-12 0.90 >More info 0.90 >More info Control for tissue data lateral nectaries Original data GEO bulk
40 ML (Mature leaves) 35DAS 0.90 >More info 0.90 >More info Control for tissue data Original data GEO bulk
41 EL (leaves 1-2) 14DAS 0.90 >More info 0.90 >More info Control for tissue data Original data GEO bulk
42 Sepals stage15 0.90 >More info 0.90 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
43 Cells whole embryo 0.89 >More info 0.91 >More info Control for tissue data whole embryo Original data
44 Ambient CO2 expanding leaf 0.90 >More info 0.90 >More info Control for tissue data expanding leaf Original data
45 lec1-1 24h post-fertilization Seed 0.89 >More info 0.90 >More info Control for tissue data Original data GEO bulk
46 Leaf 0.90 >More info 0.89 >More info Control for tissue data leaf Original data GEO bulk
47 in vivo pollen tube 0.90 >More info 0.89 >More info Control for tissue data pollen tube Original data GEO bulk
48 median nectary stage 14-15 0.89 >More info 0.90 >More info Control for tissue data median nectaries Original data GEO bulk
49 seed germinating in countinuous light 48 h SL 0.89 >More info 0.90 >More info Control for tissue data seed Original data GEO bulk
50 lec1-1 Mature Green Seed 0.90 >More info 0.89 >More info Control for tissue data Original data GEO bulk
51 Nuclei proembryo 0.88 >More info 0.91 >More info Control for tissue data proembryo Original data
52 Senescing leaf 0.90 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
53 Nuclei suspensor 0.88 >More info 0.90 >More info Control for tissue data suspensor Original data
54 lateral nectary stage 14-15 0.89 >More info 0.89 >More info Control for tissue data lateral nectaries Original data GEO bulk
55 KAN1 0.88 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
56 lec1-1 Post-Mature Green Seed 0.89 >More info 0.88 >More info Control for tissue data Original data GEO bulk
57 Anther 0.88 >More info 0.89 >More info Control for tissue data anther Original data
58 S17 0.88 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
59 Seeds stage8 w/o siliques 0.89 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
60 cortex 0.87 >More info 0.89 >More info Control for tissue data cortex Original data GEO bulk
61 Mature roots 0.87 >More info 0.89 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.90 >More info Control for tissue data Original data GEO bulk
63 heart-stage-root 0.87 >More info 0.89 >More info Control for tissue data Original data GEO bulk
64 Atape2 low light 0.87 >More info 0.89 >More info Control for tissue data shoot apical meristem Original data GEO bulk
65 torpedo-basal 0.88 >More info 0.88 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
66 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.89 >More info Control for tissue data Original data GEO bulk
67 seed germinating in countinuous light 6 h SL 0.87 >More info 0.88 >More info Control for tissue data seed Original data GEO bulk
68 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.89 >More info Control for tissue data Original data GEO bulk
69 Stamen stage15 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
70 Section Root from70 mm to 340 mm harvested
immediately		 0.86 >More info 0.89 >More info Control for tissue data Original data GEO bulk
71 AtHB8 0.88 >More info 0.87 >More info Control for tissue data shoot apical meristem Original data GEO bulk
72 HMG 0.87 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
73 seed germinating in countinuous light 12 h SL 0.87 >More info 0.88 >More info Control for tissue data seed Original data GEO bulk
74 heart-stage-cotyledon 0.87 >More info 0.88 >More info Control for tissue data Original data GEO bulk
75 mature endodermis glcal 0.87 >More info 0.87 >More info Control for tissue data endodermis Original data GEO bulk
76 Callus 0.86 >More info 0.88 >More info Control for tissue data callus Original data GEO bulk
77 differentiating xylem 0.86 >More info 0.88 >More info Control for tissue data xylem Original data GEO bulk
78 LAS 0.86 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
79 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.85 >More info 0.89 >More info Control for tissue data Original data GEO bulk
80 B5 +AA -0.88 >More info -0.86 >More info B5 -AA B5 media and treated with AA Original data
81 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.86 >More info 0.88 >More info Control for tissue data Original data GEO bulk
82 globular-apical 0.86 >More info 0.88 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
83 HDG4 0.86 >More info 0.88 >More info Control for tissue data shoot apical meristem Original data GEO bulk
84 seed germinating in countinuous light 1 h SL 0.86 >More info 0.87 >More info Control for tissue data seed Original data GEO bulk
85 torpedo-meristem 0.86 >More info 0.87 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
86 seed during stratification 48 h S 0.86 >More info 0.87 >More info Control for tissue data seed Original data GEO bulk
87 phloem sieve cells and companion cells 0.86 >More info 0.87 >More info Control for tissue data phloem Original data GEO bulk
88 Col dryseed 0.87 >More info 0.86 >More info Control for tissue data dry seeds Original data
89 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
90 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.85 >More info 0.88 >More info Control for tissue data Original data GEO bulk
91 root hair 0.85 >More info 0.87 >More info Control for tissue data root hairs Original data GEO bulk
92 whole seeds heart stage 0.86 >More info 0.86 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
93 seed coat heart stage 0.85 >More info 0.87 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
94 NAA +AA -0.87 >More info -0.85 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
95 globular-basal 0.86 >More info 0.86 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
96 whole seeds 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
97 peripheral endosperm heart stage 0.85 >More info 0.86 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
98 seed during stratification 12 h S 0.86 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
99 Emwa1 inoculated psk 3 dpi 0.87 >More info 0.84 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
100 whole seeds mature green 0.85 >More info 0.86 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
101 torpedo-root 0.85 >More info 0.85 >More info Control for tissue data Original data GEO bulk
102 dry seed 0 h 0.85 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
103 seed freshly harvested H 0.85 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
104 seed during stratification 1 h S 0.85 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
105 micropylar endosperm heart stage 0.84 >More info 0.85 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
106 chalazal seed coat mature green 0.84 >More info 0.85 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
107 peripherial endosperm 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
108 chalazal seed coat 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
109 pskr1-5 0.86 >More info 0.83 >More info wild type Cotyledons Original data GEO bulk
110 seed coat 0.85 >More info 0.84 >More info Control for tissue data Original data GEO bulk
111 embryo proper 0.84 >More info 0.85 >More info Control for tissue data Original data GEO bulk
112 peripheral endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
113 chalazal endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
114 embryo proper mature green 0.84 >More info 0.84 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
115 pollen 0.84 >More info 0.84 >More info Control for tissue data pollen grain Original data GEO bulk
116 Mature pollen 0.84 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
117 micropylar endosperm mature green 0.84 >More info 0.84 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
118 embryo proper heart stage 0.84 >More info 0.84 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
119 chalazal endosperm 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
120 QC 0.82 >More info 0.84 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
121 intact root control 0.84 >More info 0.82 >More info Control for tissue data mock whole root Original data GEO bulk
122 seed coat mature green 0.84 >More info 0.82 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
123 pericycle control 0.82 >More info 0.83 >More info Control for tissue data mock pericycle Original data GEO bulk
124 chalazal endosperm heart stage 0.81 >More info 0.83 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
125 epidermis control 0.81 >More info 0.82 >More info Control for tissue data mock epidermis Original data GEO bulk
126 in vitro pollen tube 0.82 >More info 0.81 >More info Control for tissue data pollen tube Original data
127 seed germinating in countinuous light 24h SL 0.88 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
128 Shoot apex inflorescence (after bolting) 0.90 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 Salicylic Acid 3 h -0.87 >More info -0.64 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
130 L17 phyA line -0.83 >More info -0.62 >More info WT seedling Original data GEO bulk
131 erf104-ko Flg22 4h -0.66 >More info -0.53 >More info erf104-ko H2O 4h Original data GEO bulk
132 chalazal seed coat heart stage 0.83 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
133 miR393 0h 0.57 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
134 C2H2 ZF TDNA mutant -0.62 >More info -0.45 >More info Col-WT mature pollen Original data GEO bulk
135 chalazal endosperm linear-cotyledon -0.41 >More info -0.61 >More info whole seeds linear-cotyledon Original data GEO bulk
136 chalazal endosperm pre-globular -0.43 >More info -0.56 >More info whole seed sections pre-globular Original data GEO bulk
137 Nuclei whole embryo 0.88 >More info 0.10 >More info Control for tissue data whole embryo Original data
138 torpedo-apical 0.87 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
139 bZIP TDNA mutant -0.55 >More info -0.42 >More info Col-WT mature pollen Original data GEO bulk
140 sex4-3 0.54 >More info 0.41 >More info Col-WT leaves Original data GEO bulk
141 tcp13/+ tcp14/+ 0.34 >More info 0.61 >More info WT inflorescences Original data GEO bulk
142 20d after anthesis -0.28 >More info -0.63 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
143 2hr continuous KNO3 ECR cell -0.35 >More info -0.56 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
144 WT Atum 1h 0.58 >More info 0.33 >More info WT 0h Leaf tissue Original data GEO bulk
145 2h KNO3 Whole root 0.58 >More info 0.32 >More info 2h KCl control Whole root Whole root Original data GEO bulk
146 col-5 DC3000-avrRpm 4h -0.39 >More info -0.50 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
147 mpk6-ko H2O 4h 0.64 >More info 0.24 >More info Col-0 H2O 4h Original data GEO bulk
148 columella control 0.82 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
149 ptpks2 0.57 >More info 0.25 >More info Col-WT leaves Original data GEO bulk
150 Col leaf scrape 5 dpi -0.56 >More info -0.24 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
151 Starch sheath 2 days NAA 0.57 >More info 0.23 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
152 E.coli TUV86 2 fliC 7h -0.22 >More info -0.57 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
153 sfr3 cold -0.64 >More info -0.14 >More info WT-cold aerial tissues Original data GEO bulk
154 Heat shock optimum 0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
155 met1-3 fourth-selfed generation -0.24 >More info -0.54 >More info Col WT leaf Original data GEO bulk
156 torpedo-cotyledon 0.86 >More info -0.09 >More info Control for tissue data Original data GEO bulk
157 HSP90 Reduced RNAi-A3 -0.61 >More info -0.15 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
158 cellularized endosperm linear-cotyledon -0.24 >More info -0.52 >More info whole seeds linear-cotyledon Original data GEO bulk
159 embryo proper linear-cotyledon -0.19 >More info -0.56 >More info whole seeds linear-cotyledon Original data GEO bulk
160 2hr continuous KCl and MSX control PeR cell -0.25 >More info -0.50 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
161 atr zebularine -0.53 >More info -0.21 >More info WT zebularine shoot apical meristem Original data
162 E.coli 0157 H7 7h -0.20 >More info -0.52 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
163 hrpA 7h -0.15 >More info -0.56 >More info Mock 7h hrpA Original data GEO bulk
164 erf104-ko H2O 4h 0.60 >More info 0.11 >More info Col-0 H2O 4h Original data GEO bulk
165 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
166 Dex-rga(delta17) 4h GA4+DEX 0.21 >More info 0.50 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
167 atr mock -0.51 >More info -0.19 >More info WT mock shoot apical meristem Original data
168 Col BTH -0.00 >More info 0.67 >More info Col rosettes Original data GEO bulk
169 2hr continuous KNO3 PeR cell -0.50 >More info -0.16 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
170 ani1 T0.5 0.11 >More info 0.55 >More info WT T0.5 root tissue Original data GEO bulk
171 polysome mRNA eif3k 0.53 >More info 0.12 >More info polysome mRNA WT aerial part Original data GEO bulk
172 T101D 10mM NH4NO3 -0.15 >More info -0.50 >More info col 10mM NH4NO3 Root Original data
173 35S::ERF104 H2O 4h 0.58 >More info 0.01 >More info Col-0 H2O 4h Original data GEO bulk
174 Root GLU1-KO 0.50 >More info 0.09 >More info Root Col(0) roots Original data GEO bulk
175 2hr transitory KNO3 EPR cell -0.53 >More info -0.05 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
176 Col-0 low oxygen -0.03 >More info -0.54 >More info Col-0 Original data GEO bulk
177 CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold -0.50 >More info -0.06 >More info CSP1 immonoprecipitated RNA 35S:HF-RPL18 12h cold (4C) rosettes Original data GEO bulk
178 AFB1 0h 0.51 >More info 0.01 >More info WT 0h Leaf tissue Original data GEO bulk
179 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
180 root longitudinal zone-3 -Fe 0.07 >More info -0.56 >More info root longitudinal zone-3 standard Original data GEO bulk
181 Laer pretreat GA Flg22 1h -0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
182 Cocultivation 8 hrs leaf 0.54 >More info -0.09 >More info Mock cocultivation 8 hrs leaf Leaf Original data
183 IAA7mII over-expressor IAA Treated -0.24 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
184 Leafminer damaged seedlings -0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
185 Col0-PsmES4326-24hpi -0.21 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
186 siliques AtHb1 control -0.14 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk