4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on 2hr continuous KCl and MSX control PeR cell
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "2hr continuous KCl and MSX control PeR cell"  Help Download transcriptome of top 30
Score Experiment Correlation from
2hr continuous KCl and MSX control PeR cell		 Correlation to
2hr continuous KCl and MSX control PeR cell		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 2hr continuous KCl and MSX control PeR cell 1.00 >More info 1.00 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
2 2hr continuous KNO3 and MSX and Gln PeR cell -0.88 >More info -0.82 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
3 2hr continuous KNO3 and MSX PeR cell -0.64 >More info -0.71 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
4 seedling h S Exp -0.64 >More info -0.51 >More info seedling -S Exp seedling Original data
5 red illumination +lincomycin -0.50 >More info -0.61 >More info red illumination -lincomycin Original data GEO bulk
6 IAA7mII over-expressor IAA Treated 0.37 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
7 Cycloheximide 3 h 0.54 >More info 0.51 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
8 pif1-2 dark 0.57 >More info 0.48 >More info Wt dark Original data GEO bulk
9 Mutant pif1-2 (Dark etiol) 0.57 >More info 0.48 >More info Col-0 (Dark etiol) Original data GEO bulk
10 ISOXABEN -0.61 >More info -0.42 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
11 root epidermis and lateral root cap -S -0.41 >More info -0.62 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
12 Prohexadione 3 h 0.39 >More info 0.63 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
13 Full C2 T2 0.40 >More info 0.62 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
14 Shoot apex vegetative -0.60 >More info -0.41 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
15 AtLysM RLK1 mutant chitooctaose -0.54 >More info -0.46 >More info WT chitooctaose Original data GEO bulk
16 root cells epidermis 140mM NaCl 32 hours -0.48 >More info -0.52 >More info root cells epidermis standard 1 hour root cells epidermis Original data
17 WT drought 0.64 >More info 0.35 >More info WT control All aerial tissue Original data GEO bulk
18 sex4-3 -0.53 >More info -0.46 >More info Col-WT leaves Original data GEO bulk
19 stn7-1 -0.47 >More info -0.52 >More info Col-0 rosette leaves Original data GEO bulk
20 Elevated CO2 LIMITING N DAY 0.48 >More info 0.51 >More info Elevated CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
21 Starch sheath 2 days NAA -0.56 >More info -0.42 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
22 embryo proper heart stage -0.53 >More info -0.45 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
23 Laer pretreat GA Flg22 1h 0.27 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
24 Ws 2h KNO3 -0.40 >More info -0.58 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
25 seed germinating in countinuous light 6 h SL -0.50 >More info -0.47 >More info Control for tissue data seed Original data GEO bulk
26 Norflurazon -0.55 >More info -0.42 >More info Col-0 Original data GEO bulk
27 P35S:rGRF1 -0.55 >More info -0.42 >More info Col-0 Original data GEO bulk
28 Norflurazon -0.55 >More info -0.42 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
29 Ambient CO2 leaf primordia -0.53 >More info -0.43 >More info Control for tissue data leaf primordia Original data
30 Shoot apex vegetative &Young leaves -0.57 >More info -0.39 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
31 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.60 >More info 0.36 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
32 seed germinating in countinuous light 12 h SL -0.50 >More info -0.46 >More info Control for tissue data seed Original data GEO bulk
33 WT chitooctaose 0.46 >More info 0.50 >More info WT water Original data GEO bulk
34 SCR-GR Time 1H Dex 0.51 >More info 0.44 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
35 whole seeds -0.56 >More info -0.38 >More info Control for tissue data Original data GEO bulk
36 seed germinating in countinuous light 1 h SL -0.50 >More info -0.44 >More info Control for tissue data seed Original data GEO bulk
37 peripheral endosperm heart stage -0.51 >More info -0.43 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
38 WT 30μM phosphate 8 hours. -0.50 >More info -0.44 >More info WT control (not supplemented). Original data
39 embryo proper -0.53 >More info -0.41 >More info Control for tissue data Original data GEO bulk
40 root cells epidermis 140mM NaCl 3 hours -0.44 >More info -0.50 >More info root cells epidermis standard 1 hour root cells epidermis Original data
41 grf1/grf2/grf3 0.54 >More info 0.39 >More info WS Original data GEO bulk
42 Apex 14DAS -0.56 >More info -0.37 >More info Control for tissue data Original data GEO bulk
43 micropylar endosperm heart stage -0.52 >More info -0.41 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
44 HARAP aerobic -0.41 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
45 2hr transitory KNO3 PeR cell 0.42 >More info 0.51 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
46 hira-protoplast -0.53 >More info -0.39 >More info WT-protoplast protoplast Original data
47 root cells cortex -Fe 0.66 >More info 0.26 >More info whole roots standard Original data GEO bulk
48 WT in -N 0.55 >More info 0.37 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
49 Shoot apex transition (before bolting) -0.54 >More info -0.38 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
50 seed germinating in countinuous light 48 h SL -0.50 >More info -0.42 >More info Control for tissue data seed Original data GEO bulk
51 seedling -0.57 >More info -0.35 >More info Control for tissue data seedling Original data GEO bulk
52 21h-DC3000 hrpA -0.50 >More info -0.42 >More info 21h-DC3000 leaves Original data GEO bulk
53 WT cotyledons -0.52 >More info -0.39 >More info Control for tissue data cotyledons Original data
54 whole seeds mature green -0.55 >More info -0.36 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
55 Col0-PsmES4326-24hpi 0.30 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
56 B5 +AA 0.56 >More info 0.34 >More info B5 -AA B5 media and treated with AA Original data
57 root cells stele 140mM NaCl 48 hours -0.53 >More info -0.37 >More info root cells stele standard 1 hour root cells stele Original data
58 siliques -0.54 >More info -0.36 >More info Control for tissue data Original data GEO bulk
59 Col-0 (t-zeatin 3 h) -0.39 >More info -0.51 >More info Col-0 Original data Cytokinin treatment of seedlings
60 WT+chitooctaose 0.35 >More info 0.55 >More info WT+water chitooctaose seedlings Original data GEO bulk
61 Hypocotyl -0.57 >More info -0.33 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
62 Flower (stage12) -0.55 >More info -0.34 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
63 Callus -0.52 >More info -0.37 >More info Control for tissue data callus Original data GEO bulk
64 chalazal endosperm -0.53 >More info -0.36 >More info Control for tissue data Original data GEO bulk
65 whole seeds heart stage -0.52 >More info -0.37 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
66 Cs root 0.55 >More info 0.33 >More info control root Original data GEO bulk
67 Inflorescences ler -0.53 >More info -0.35 >More info Control for tissue data inflorescences Original data GEO bulk
68 chalazal seed coat -0.58 >More info -0.30 >More info Control for tissue data Original data GEO bulk
69 Carpels stage15 -0.52 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
70 Bud -0.51 >More info -0.35 >More info Control for tissue data pollen grains and tubes Original data
71 root cells stele 140mM NaCl 32 hours -0.50 >More info -0.36 >More info root cells stele standard 1 hour root cells stele Original data
72 unpollinated pistil -0.56 >More info -0.29 >More info Control for tissue data pistil Original data GEO bulk
73 NAA +AA 0.52 >More info 0.33 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
74 Rosette leaf No12 -0.50 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
75 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.58 >More info 0.27 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
76 ga1-3 1h GA4 0.57 >More info 0.28 >More info ga1-3 1h water shoots Original data GEO bulk
77 Apex 5DAS -0.50 >More info -0.34 >More info Control for tissue data Original data GEO bulk
78 chalazal endosperm mature green -0.56 >More info -0.28 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
79 flower-buds -0.52 >More info -0.32 >More info Control for tissue data Original data GEO bulk
80 flowers -0.52 >More info -0.32 >More info Control for tissue data Original data GEO bulk
81 root callus inducing medium 12 h -0.53 >More info -0.30 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
82 axr2 -0.52 >More info -0.31 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
83 Pedicels stage15 -0.51 >More info -0.32 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
84 Seeds stage3 with siliques -0.52 >More info -0.31 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
85 peripherial endosperm -0.52 >More info -0.31 >More info Control for tissue data Original data GEO bulk
86 root control pRPL11C -0.55 >More info -0.28 >More info root control total control root Original data GEO bulk
87 short 14-degree- -0.31 >More info -0.52 >More info control short Original data GEO bulk
88 ANOXIA -0.33 >More info -0.50 >More info ANOXIA+SUCROSE Original data GEO bulk
89 Mature roots -0.58 >More info -0.25 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
90 35S:RPS4 eds1-2 2h -0.21 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
91 Petiol (leaf7) -0.50 >More info -0.32 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
92 LAS -0.50 >More info -0.32 >More info Control for tissue data shoot apical meristem Original data GEO bulk
93 ML (Mature leaves) 35DAS -0.51 >More info -0.31 >More info Control for tissue data Original data GEO bulk
94 cngc1-3 -0.55 >More info -0.27 >More info Col-0 root Original data GEO bulk
95 seed coat heart stage -0.50 >More info -0.32 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
96 axr2-BR -0.53 >More info -0.29 >More info BR BR dark-grown seedlings Original data GEO bulk
97 root callus inducing medium 24h -0.56 >More info -0.26 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
98 Ambient CO2 fully expanded leaf -0.51 >More info -0.31 >More info Control for tissue data fully expanded leaf Original data
99 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.55 >More info 0.26 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
100 peripheral endosperm mature green -0.51 >More info -0.30 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
101 Stem tissue 2 days NAA -0.59 >More info -0.22 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
102 lec1-1 24h post-fertilization Seed -0.50 >More info -0.30 >More info Control for tissue data Original data GEO bulk
103 HDG4 -0.50 >More info -0.30 >More info Control for tissue data shoot apical meristem Original data GEO bulk
104 root callus inducing medium 48 h -0.55 >More info -0.25 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
105 phosphate-starved 0.25 >More info 0.55 >More info control shoot tissue Original data GEO bulk
106 chalazal seed coat mature green -0.53 >More info -0.26 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
107 micropylar endosperm mature green -0.50 >More info -0.29 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
108 Split KNO3 roots - 8hours -0.21 >More info -0.58 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
109 KAN1 -0.51 >More info -0.27 >More info Control for tissue data shoot apical meristem Original data GEO bulk
110 ovule -0.51 >More info -0.27 >More info Control for tissue data ovule Original data GEO bulk
111 Atape2 low light -0.50 >More info -0.28 >More info Control for tissue data shoot apical meristem Original data GEO bulk
112 gai MeJA 1h -0.51 >More info -0.26 >More info Laer MeJA 1h leaf discs Original data GEO bulk
113 lec1-1 Cotyledon Stage Seed -0.50 >More info -0.27 >More info Control for tissue data Original data GEO bulk
114 S17 -0.57 >More info -0.20 >More info Control for tissue data shoot apical meristem Original data GEO bulk
115 Stem 1st node -0.50 >More info -0.26 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
116 cngc19 -0.57 >More info -0.19 >More info Col-0 root Original data GEO bulk
117 silique -0.50 >More info -0.25 >More info Control for tissue data silique Original data GEO bulk
118 root longitudinal zone-3 pH 4.6 -0.60 >More info -0.15 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
119 essp4/sdg8-5 mutant -0.58 >More info -0.16 >More info wild type leaf Original data GEO bulk
120 flower -0.50 >More info -0.24 >More info Control for tissue data flower Original data GEO bulk
121 intact root control -0.51 >More info -0.23 >More info Control for tissue data mock whole root Original data GEO bulk
122 root - 08% oxygen - 30min -0.13 >More info -0.61 >More info root - 21% oxygen - 30min Original data GEO bulk
123 rdr1-1 0.53 >More info 0.20 >More info Col-0 Original data GEO bulk
124 HMG -0.50 >More info -0.22 >More info Control for tissue data shoot apical meristem Original data GEO bulk
125 CCA1-ox 6am non-polysomal 0.21 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
126 sdg8-2 mutant -0.53 >More info -0.18 >More info wild type leaf Original data GEO bulk
127 axr1 hypocotyl 0.53 >More info 0.17 >More info wt hypocotyl hypocotyl Original data GEO bulk
128 AtHB8 -0.53 >More info -0.17 >More info Control for tissue data shoot apical meristem Original data GEO bulk
129 250uM K-nitrate 20min roots -0.14 >More info -0.56 >More info 250uM KCl 20min roots Roots Original data GEO bulk
130 24h light (+Lincomycin) -0.52 >More info -0.18 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
131 FLIGHT TAGESB plate6 ROOTS 0.16 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
132 root cells -Fe 0.51 >More info 0.18 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
133 root - 04% oxygen - 48h -0.18 >More info -0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
134 Dry pre-dawn 0.19 >More info 0.50 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
135 bri1-116 -0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
136 Ler hypocotyl 0.51 >More info 0.17 >More info wt hypocotyl hypocotyl Original data GEO bulk
137 Control KNO3 roots - 8hours -0.14 >More info -0.53 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
138 Root wt CLE10 0.10 >More info 0.54 >More info Root wt CLE25 root tip Original data GEO bulk
139 sfr3 cold 0.52 >More info 0.11 >More info WT-cold aerial tissues Original data GEO bulk
140 elevated CO2 high Mg shoot -0.58 >More info -0.05 >More info atmospheric CO2 high Mg shoot Shoot Original data
141 rhd2 -0.50 >More info -0.11 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
142 Split KNO3 roots - 2hours -0.10 >More info -0.50 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
143 tunicamycin -0.09 >More info -0.50 >More info DMF Original data GEO bulk
144 Col BTH -0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
145 Leafminer damaged seedlings -0.00 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
146 WT 3h -P -0.05 >More info 0.58 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
147 root - 08% oxygen - 48h 0.10 >More info -0.60 >More info root - 21% oxygen - 48h Original data GEO bulk
148 GST 4 h (leaf) -0.04 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
149 FarRed Light 45min -0.04 >More info 0.51 >More info White Light 45min Original data Light treatments
150 ckh1 CK200 -0.06 >More info 0.53 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
151 WT Atum 1h -0.53 >More info 0.07 >More info WT 0h Leaf tissue Original data GEO bulk
152 siliques AtHb1 control -0.14 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
153 Heat shock optimum -0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
154 seed germinating in countinuous light 24h SL -0.48 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
155 chalazal seed coat heart stage -0.53 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
156 Shoot apex inflorescence (after bolting) -0.50 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages