4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight
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List of experiments correlated with "ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight"  Help Download transcriptome of top 30
Score Experiment Correlation from
ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight		 Correlation to
ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 1.00 >More info 1.00 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
2 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.90 >More info 0.91 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
3 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.87 >More info 0.85 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
4 rrd2 IBA 0.72 >More info 0.68 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
5 SAM SE agl15 agl18 double mutant 0.71 >More info 0.66 >More info SAM SE Col Original data GEO bulk
6 arp6-10 12 ºC -0.69 >More info -0.65 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
7 tbf1-mock spray 0.73 >More info 0.60 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
8 dark +H2O2 -0.66 >More info -0.58 >More info dark 5 mM H2O2 seedling Original data GEO bulk
9 KCl germinant 0.67 >More info 0.52 >More info Millipore Water germinant KCl seedling Original data
10 atmyc2 Seedling Dark 0.63 >More info 0.55 >More info WT Seedling Dark Original data GEO bulk
11 gpa1 -ABA LF 0.50 >More info 0.67 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
12 nNOS-drought 0.63 >More info 0.54 >More info WT-drought leaf Original data
13 polysome mRNA eif3k -0.59 >More info -0.56 >More info polysome mRNA WT aerial part Original data GEO bulk
14 3m.KNO3 0.54 >More info 0.61 >More info To. KNO3 14 day old Roots Original data GEO bulk
15 sfr3 cold 0.67 >More info 0.46 >More info WT-cold aerial tissues Original data GEO bulk
16 3m.KCl 0.53 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
17 WT-elf18 0.65 >More info 0.46 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
18 nNOS-control 0.64 >More info 0.47 >More info WT-control leaf Original data
19 tbf1-SA 0.62 >More info 0.48 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
20 6m.KCl 0.51 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
21 bHLH122 ox -0.53 >More info -0.57 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
22 Laer pretreat GA Flg22 1h 0.39 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
23 miR 0h -0.49 >More info -0.61 >More info Col 0h Leaf Original data GEO bulk
24 WT cotyledons -0.54 >More info -0.55 >More info Control for tissue data cotyledons Original data
25 Ambient CO2 expanding leaf -0.54 >More info -0.55 >More info Control for tissue data expanding leaf Original data
26 agb1 gpa1 -ABA LF 0.50 >More info 0.59 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
27 oxt6:AtCPSF30 line -0.61 >More info -0.47 >More info oxt6 mutant Original data GEO bulk
28 6m.KNO3 0.51 >More info 0.56 >More info To. KNO3 14 day old Roots Original data GEO bulk
29 Ambient CO2 fully expanded leaf -0.54 >More info -0.53 >More info Control for tissue data fully expanded leaf Original data
30 TiO2 germinant 0.61 >More info 0.45 >More info Millipore Water germinant TiO2 seedling Original data
31 arp6-10 2h 27 -degree-C -0.54 >More info -0.52 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
32 WT light -0.57 >More info -0.49 >More info WT dark Original data GEO bulk
33 Ambient CO2 leaf primordia -0.50 >More info -0.55 >More info Control for tissue data leaf primordia Original data
34 seedling -0.51 >More info -0.54 >More info Control for tissue data seedling Original data GEO bulk
35 agb1 -ABA LF 0.52 >More info 0.52 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
36 Inflorescences Trp1 -0.39 >More info -0.65 >More info Inflorescences ler inflorescences Original data GEO bulk
37 Col-0 +ABA LF 0.55 >More info 0.48 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
38 IAA7mII over-expressor IAA Treated 0.33 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
39 ML (Mature leaves) 35DAS -0.52 >More info -0.47 >More info Control for tissue data Original data GEO bulk
40 35S::ERF104 H2O 4h -0.61 >More info -0.38 >More info Col-0 H2O 4h Original data GEO bulk
41 Starch sheath 2 days NAA -0.61 >More info -0.38 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
42 Rosette leaf No12 -0.48 >More info -0.51 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
43 seed germinating in countinuous light 48 h SL -0.45 >More info -0.54 >More info Control for tissue data seed Original data GEO bulk
44 col-5 hrpA 2h 0.43 >More info 0.56 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
45 leaf -0.48 >More info -0.51 >More info Control for tissue data leaf Original data GEO bulk
46 Nicotinamide-77hr 0.55 >More info 0.43 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
47 root - 08% oxygen - 2h 0.46 >More info 0.52 >More info root - 21% oxygen - 2h Original data GEO bulk
48 B5 +AA 0.43 >More info 0.55 >More info B5 -AA B5 media and treated with AA Original data
49 WT polysome -0.60 >More info -0.37 >More info WT non-polysome Original data GEO bulk
50 Col leaf scrape 5 dpi 0.62 >More info 0.34 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
51 Emwa1 inoculated psk 3 dpi -0.42 >More info -0.54 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
52 2hr continuous KCl and MSX control PeR cell 0.36 >More info 0.60 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
53 Apex 14DAS -0.45 >More info -0.50 >More info Control for tissue data Original data GEO bulk
54 ACC 0.5 h 0.41 >More info 0.53 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
55 cngc1-3 -0.38 >More info -0.55 >More info Col-0 root Original data GEO bulk
56 Shoot apex vegetative &Young leaves -0.43 >More info -0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
57 pskr1-5 -0.41 >More info -0.52 >More info wild type Cotyledons Original data GEO bulk
58 Dex-rga(delta17) 2h GA4 0.43 >More info 0.50 >More info Vector 4h GA4 shoots Original data GEO bulk
59 peripheral endosperm heart stage -0.39 >More info -0.53 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
60 NAA +AA 0.38 >More info 0.54 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
61 erf104-ko H2O 4h -0.57 >More info -0.35 >More info Col-0 H2O 4h Original data GEO bulk
62 EL (leaves 1-2) 14DAS -0.42 >More info -0.50 >More info Control for tissue data Original data GEO bulk
63 npr1-3 DCA 48h -0.42 >More info -0.50 >More info npr1-3 MOCK 48h Original data GEO bulk
64 embryo proper -0.40 >More info -0.51 >More info Control for tissue data Original data GEO bulk
65 2hr transitory KNO3 PeR cell 0.37 >More info 0.54 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
66 seed germinating in countinuous light 12 h SL -0.41 >More info -0.50 >More info Control for tissue data seed Original data GEO bulk
67 DC3000 7h 0.41 >More info 0.50 >More info Mock 7h DC3000 Original data GEO bulk
68 WT Shoot-Pi 0.40 >More info 0.50 >More info WT Shoot+Pi shoots Original data GEO bulk
69 Mutant ga1-5 0.57 >More info 0.33 >More info Ler-1 Original data Comparison of plant hormone related mutant
70 csn4-1 dark 0.52 >More info 0.36 >More info WT light Original data GEO bulk
71 msh1 recA3 untreated -0.50 >More info -0.38 >More info WT untreated above-ground parts Original data GEO bulk
72 WT 30μM phosphate 8 hours. -0.32 >More info -0.55 >More info WT control (not supplemented). Original data
73 Van SA 0.57 >More info 0.30 >More info Col-0 SA Original data GEO bulk
74 SAM SE 35S:AGL15 0.52 >More info 0.34 >More info SAM SE Col Original data GEO bulk
75 Full C2 T2 0.31 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
76 atmyc2 Seedling BL -0.58 >More info -0.28 >More info WT Seedling BL Original data GEO bulk
77 WT Seedling BL -0.50 >More info -0.35 >More info WT Seedling Dark Original data GEO bulk
78 sex4-3 -0.58 >More info -0.26 >More info Col-WT leaves Original data GEO bulk
79 erf104-ko Flg22 4h 0.58 >More info 0.26 >More info erf104-ko H2O 4h Original data GEO bulk
80 Dark 4 h pls RedLight 1min -0.30 >More info -0.53 >More info Dark 4 h Original data Light treatments
81 Col0-PsmES4326-24hpi 0.22 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
82 Propiconazole 3 h -0.31 >More info -0.51 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
83 Red/FR Light45min -0.25 >More info -0.57 >More info FarRed Light 45min Original data Light treatments
84 atmyc2 cop1 Seedling Dark -0.53 >More info -0.28 >More info WT Seedling Dark Original data GEO bulk
85 mpk6-ko H2O 4h -0.52 >More info -0.29 >More info Col-0 H2O 4h Original data GEO bulk
86 QC -0.28 >More info -0.53 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
87 light -0.62 >More info -0.18 >More info dark light seedling Original data GEO bulk
88 atmyc2 cop1 Seedling BL -0.52 >More info -0.28 >More info WT Seedling BL Original data GEO bulk
89 WT Red light 18h -0.29 >More info -0.51 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
90 det2 light-dark 0.52 >More info 0.27 >More info det2 light light-dark Original data GEO bulk
91 spx1 spx2 resupplied Pi 4h 0.55 >More info 0.24 >More info WT resupplied Pi 4h seedlings Original data
92 Van 0.52 >More info 0.26 >More info Col-0 Original data GEO bulk
93 tbf1-elf18 -0.51 >More info -0.27 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
94 BAM7 Ox untreated -0.24 >More info -0.54 >More info WT untreated none shoot Original data
95 QC pSCR 3h BL -0.06 >More info -0.71 >More info QC pSCR 0h BL brassinosteroid root Original data
96 col-5 DC3000 12h 0.23 >More info 0.52 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
97 Leafminer damaged seedlings 0.18 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
98 Seedling KUA1-IOX est 0.18 >More info 0.51 >More info Seedling KUA1-IOX mock Original data
99 bri1-116 -0.06 >More info 0.73 >More info Col seedling Original data GEO bulk
100 cop1 Seedling BL -0.57 >More info -0.08 >More info WT Seedling BL Original data GEO bulk
101 ptpks2 -0.59 >More info -0.04 >More info Col-WT leaves Original data GEO bulk
102 NJ15 -0.11 >More info -0.52 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
103 Col BTH -0.07 >More info 0.67 >More info Col rosettes Original data GEO bulk
104 6xX2x interploidy cross -0.01 >More info -0.53 >More info 2xX2x cross Original data GEO bulk
105 Paclobutrazol 3 h -0.03 >More info -0.50 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
106 2hr transitory KNO3 PrR cell 0.05 >More info -0.55 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
107 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
108 dsr1 -0.50 >More info 0.03 >More info WT mock Whole seedling Original data GEO bulk
109 Heat shock optimum -0.20 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
110 siliques AtHb1 control -0.08 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
111 Shoot apex inflorescence (after bolting) -0.34 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
112 seed germinating in countinuous light 24h SL -0.43 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk