4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 6m.KNO3
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List of experiments correlated with "6m.KNO3"  Help Download transcriptome of top 30
Score Experiment Correlation from
6m.KNO3		 Correlation to
6m.KNO3		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 6m.KNO3 1.00 >More info 1.00 >More info To. KNO3 14 day old Roots Original data GEO bulk
2 6m.KCl 0.94 >More info 0.93 >More info To. KCl 14 day old Roots Original data GEO bulk
3 3m.KNO3 0.91 >More info 0.92 >More info To. KNO3 14 day old Roots Original data GEO bulk
4 3m.KCl 0.91 >More info 0.91 >More info To. KCl 14 day old Roots Original data GEO bulk
5 cngc19 -0.77 >More info -0.67 >More info Col-0 root Original data GEO bulk
6 15m.KNO3 0.61 >More info 0.80 >More info To. KNO3 14 day old Roots Original data GEO bulk
7 2hr transitory KNO3 PeR cell 0.65 >More info 0.67 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
8 20m.KCl 0.55 >More info 0.74 >More info To. KCl 14 day old Roots Original data GEO bulk
9 sfr3 cold 0.64 >More info 0.61 >More info WT-cold aerial tissues Original data GEO bulk
10 12m.KCl 0.64 >More info 0.61 >More info To. KCl 14 day old Roots Original data GEO bulk
11 12m.KNO3 0.55 >More info 0.68 >More info To. KNO3 14 day old Roots Original data GEO bulk
12 triplod male excess -0.56 >More info -0.62 >More info tetraploid Original data GEO bulk
13 2hr transitory KNO3 SR cell 0.60 >More info 0.57 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
14 OXUPB1-2 meristematic zone 0.64 >More info 0.52 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
15 Prohexadione 3 h 0.47 >More info 0.68 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
16 NaCl scm -0.51 >More info -0.62 >More info NaCl Col Original data GEO bulk
17 Red/FR Light45min -0.34 >More info -0.78 >More info FarRed Light 45min Original data Light treatments
18 phr1 Shoot-Pi 0.51 >More info 0.59 >More info WT Root-Pi shoots Original data GEO bulk
19 rrd2 IBA 0.55 >More info 0.55 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
20 cngc1-3 -0.69 >More info -0.40 >More info Col-0 root Original data GEO bulk
21 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.57 >More info 0.51 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
22 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.56 >More info 0.51 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
23 phr1 phl1 Root-Pi -0.40 >More info -0.67 >More info WT Shoot+Pi roots Original data GEO bulk
24 Indigo Carmine 0.5 uM 0.45 >More info 0.62 >More info Control MV and IC Indigo Carmine Original data
25 root - 01% oxygen - 48h -0.48 >More info -0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
26 NFA8 roots 2hr KNO3 nitrogen 0.64 >More info 0.42 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
27 Norflurazon -0.51 >More info -0.54 >More info Col-0 Original data GEO bulk
28 Norflurazon -0.51 >More info -0.54 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
29 vtc2 day 7 induction -0.48 >More info -0.57 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
30 ara1/2mut -0.54 >More info -0.50 >More info Col-3 Original data GEO bulk
31 Ts5 roots 2hr KNO3 nitrogen 0.54 >More info 0.50 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
32 tbf1-mock spray 0.53 >More info 0.51 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
33 Dex-rga(delta17) 2h GA4 0.49 >More info 0.55 >More info Vector 4h GA4 shoots Original data GEO bulk
34 SAM SE agl15 agl18 double mutant 0.47 >More info 0.56 >More info SAM SE Col Original data GEO bulk
35 2hr KCl control SR cell 0.54 >More info 0.48 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
36 GA 120min 0.55 >More info 0.47 >More info CON120 GA 120 min. root tips Original data GEO bulk
37 iron minus 0 h 0.46 >More info 0.56 >More info iron +0 h root Original data GEO bulk
38 bam7 untreated -0.35 >More info -0.67 >More info WT untreated none shoot Original data
39 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 0.54 >More info 0.47 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
40 Control KNO3 roots - 8hours 0.52 >More info 0.49 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
41 arp6-10 12 ºC -0.50 >More info -0.51 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
42 bri1-116 0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
43 Dex-rga(delta17) 4h GA4 0.47 >More info 0.53 >More info Vector 4h GA4 shoots Original data GEO bulk
44 ga1-3 1h GA4 0.55 >More info 0.44 >More info ga1-3 1h water shoots Original data GEO bulk
45 ptpks2 -0.44 >More info -0.55 >More info Col-WT leaves Original data GEO bulk
46 intact root control -0.38 >More info -0.61 >More info Control for tissue data mock whole root Original data GEO bulk
47 nNOS-drought 0.51 >More info 0.47 >More info WT-drought leaf Original data
48 K starvation (root) 0.48 >More info 0.50 >More info Ws (root) Original data GEO bulk
49 IAA7mII over-expressor IAA Treated 0.29 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
50 2hr continuous KNO3 PeR cell 0.33 >More info 0.65 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
51 root cells endodermis and quiescent center -Fe 0.56 >More info 0.40 >More info whole roots standard Original data GEO bulk
52 epidermis control -0.37 >More info -0.59 >More info Control for tissue data mock epidermis Original data GEO bulk
53 QC -0.37 >More info -0.58 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
54 Col-0 low oxygen -0.42 >More info -0.52 >More info Col-0 Original data GEO bulk
55 HSP90 Reduced RNAi-B1 -0.51 >More info -0.42 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
56 fri-flc -0.58 >More info -0.34 >More info WT Original data GEO bulk
57 root - 08% oxygen - 30min -0.20 >More info -0.71 >More info root - 21% oxygen - 30min Original data GEO bulk
58 Callus -0.33 >More info -0.58 >More info Control for tissue data callus Original data GEO bulk
59 gapcp1gapcp2 ABA 0.37 >More info 0.53 >More info WT ABA ABA seedling Original data GEO bulk
60 PNO8 12 h 0.39 >More info 0.50 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
61 pericycle control -0.35 >More info -0.54 >More info Control for tissue data mock pericycle Original data GEO bulk
62 root cortex 40 mM NaCl 0.57 >More info 0.32 >More info root cortex Original data GEO bulk
63 sng1 -0.33 >More info -0.54 >More info WT aerial region Original data GEO bulk
64 2hr continuous KNO3 and MSX and Gln PeR cell 0.54 >More info 0.31 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
65 Hydrogen Peroxide 500 uM -0.54 >More info -0.31 >More info Control RB and PER Hydrogen Peroxide Original data
66 WT Shoot Hypoxia -0.17 >More info -0.68 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
67 root - 04% oxygen - 2h -0.11 >More info -0.74 >More info root - 21% oxygen - 2h Original data GEO bulk
68 mutant-line409 0.35 >More info 0.50 >More info WT-control whole plant Original data GEO bulk
69 SQ8 roots 2hr KNO3 nitrogen 0.56 >More info 0.28 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
70 2h KNO3 Whole root -0.69 >More info -0.15 >More info 2h KCl control Whole root Whole root Original data GEO bulk
71 OE-HRA1 2HS  0.51 >More info 0.31 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
72 Mature roots -0.27 >More info -0.55 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
73 non-polysome mRNA eif3k -0.27 >More info -0.55 >More info non-polysome mRNA WT aerial part Original data GEO bulk
74 Mutant arf19-1 -0.25 >More info -0.57 >More info Col Original data GEO bulk
75 WT Atum 1h -0.28 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
76 SQ8 roots 2hr KCl control 0.54 >More info 0.26 >More info Col0 roots 2hr KCl control root Original data GEO bulk
77 Uniconazole 3 h -0.19 >More info -0.61 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
78 G3P -0.12 >More info -0.66 >More info Mock distal leaves Original data GEO bulk
79 cat2-2; 8h switch to ambient CO2 concentrations; -0.26 >More info -0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
80 MPK6 ox Shoot Hypoxia -0.09 >More info -0.67 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
81 -Sulfate 24 h 0.68 >More info 0.06 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
82 phosphate-starved 0.24 >More info 0.50 >More info control shoot tissue Original data GEO bulk
83 NAA +AA 0.17 >More info 0.57 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
84 P.syringae AvrRpt2 4 h (leaf) -0.23 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
85 seed germinating in countinuous light 48 h SL -0.21 >More info -0.52 >More info Control for tissue data seed Original data GEO bulk
86 sfr6 drought -0.19 >More info -0.54 >More info WT drought All aerial tissue Original data GEO bulk
87 GRX-overexpression seedlings MV -0.19 >More info -0.54 >More info WT seedlings MV Seedlings Original data GEO bulk
88 Seedling KUA1-IOX est -0.04 >More info -0.69 >More info Seedling KUA1-IOX mock Original data
89 Imbibed 1 h (seed) -0.20 >More info -0.52 >More info Dry seed Original data Time course of early seed germination
90 AGL24 induced 0.21 >More info 0.51 >More info WT-ESTRADIOL Original data GEO bulk
91 BAM8-N Ox untreated -0.53 >More info -0.18 >More info WT untreated none shoot Original data
92 IPT8 mutant tZ 24h -0.58 >More info -0.13 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
93 root - 08% oxygen - 48h -0.06 >More info -0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
94 Aerobic prt6 -0.11 >More info -0.60 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
95 Laer pretreat GA Flg22 1h -0.02 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
96 Light 0.5h steady-state -0.14 >More info -0.54 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
97 Section Root from70 mm to 340 mm harvested
immediately		 -0.11 >More info -0.54 >More info Control for tissue data Original data GEO bulk
98 35S:PCO1 hypoxia 0.06 >More info 0.58 >More info WT hypoxia whole rosette Original data
99 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 -0.07 >More info -0.55 >More info Control for tissue data Original data GEO bulk
100 Paclobutrazol 3 h -0.08 >More info -0.54 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
101 pif4pif5 mut dark 0.11 >More info 0.51 >More info WT dark Original data GEO bulk
102 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 -0.08 >More info -0.54 >More info Control for tissue data Original data GEO bulk
103 vtc1-1 0.01 >More info 0.60 >More info Col-0 whole plant Original data GEO bulk
104 irradiated leaf (WT 5d) 0.11 >More info 0.50 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
105 Root from tip to 130 mm proximal to tip (cut
8dpg)		 -0.07 >More info -0.53 >More info Control for tissue data Original data GEO bulk
106 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 -0.07 >More info -0.53 >More info Control for tissue data Original data GEO bulk
107 root - 04% oxygen - 30min -0.02 >More info -0.58 >More info root - 21% oxygen - 30min Original data GEO bulk
108 Shoot apex inflorescence (after bolting) -0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
109 Root from tip to 130 mm proximal to tip (cut
4dpg)		 -0.03 >More info -0.52 >More info Control for tissue data Original data GEO bulk
110 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 -0.01 >More info -0.53 >More info Control for tissue data Original data GEO bulk
111 Leafminer damaged seedlings -0.02 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
112 HSP90 Reduced Salk hsp90.3 0.53 >More info -0.01 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
113 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
114 FarRed Light 45min -0.19 >More info 0.70 >More info White Light 45min Original data Light treatments
115 Light 0.5h polysome-bound 0.08 >More info -0.59 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
116 root - 04% oxygen - 48h 0.16 >More info -0.66 >More info root - 21% oxygen - 48h Original data GEO bulk
117 Aerobic e1 ate2 0.01 >More info -0.51 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
118 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.04 >More info -0.53 >More info Control for tissue data Original data GEO bulk
119 shoot hypoxia p35S 0.10 >More info -0.59 >More info shoot hypoxia total Original data GEO bulk
120 Col0-PsmES4326-24hpi -0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
121 root longitudinal zone-3 -Fe -0.51 >More info 0.05 >More info root longitudinal zone-3 standard Original data GEO bulk
122 seed germinating in countinuous light 24h SL -0.24 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
123 Col BTH -0.24 >More info 0.67 >More info Col rosettes Original data GEO bulk
124 Heat shock optimum -0.33 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
125 MPK6 ox Root Hypoxia 0.22 >More info -0.53 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
126 siliques AtHb1 control -0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
127 20m.KNO3 -0.35 >More info 0.56 >More info To. KNO3 14 day old Roots Original data GEO bulk