4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on npr1-3 DCA 48h
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List of experiments correlated with "npr1-3 DCA 48h"  Help Download transcriptome of top 30
Score Experiment Correlation from
npr1-3 DCA 48h		 Correlation to
npr1-3 DCA 48h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 npr1-3 DCA 48h 1.00 >More info 1.00 >More info npr1-3 MOCK 48h Original data GEO bulk
2 Col-0 INA 48h 0.80 >More info 0.76 >More info Col-0 MOCK 48h Original data GEO bulk
3 INA 0.70 >More info 0.84 >More info CK INA seedling Original data
4 Col-0 DCA 48h 0.75 >More info 0.78 >More info Col-0 MOCK 48h Original data GEO bulk
5 cpr5npr1 0.78 >More info 0.72 >More info WT(COL) Original data GEO bulk
6 Shoot -Cs 0.72 >More info 0.77 >More info Control-shoot Original data GEO bulk
7 cpr5npr1svi1 0.76 >More info 0.69 >More info WT(COL) Original data GEO bulk
8 UV Stress 24 h (shoot) 0.74 >More info 0.70 >More info Stress mock 24 h (shoot) Original data Stress treatments
9 WT-SA 0.75 >More info 0.68 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
10 cpr5scv1 0.72 >More info 0.69 >More info WT(COL) Original data GEO bulk
11 gh3.5-1D 48 hpi 0.73 >More info 0.65 >More info Col-0 uninoculated Original data GEO bulk
12 WT-NOCO2 INFECTED 0.74 >More info 0.64 >More info WT-MOCK Original data GEO bulk
13 cpr5 0.66 >More info 0.70 >More info WT(COL) Original data GEO bulk
14 cat2-2; 8h switch to ambient CO2 concentrations; 0.80 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
15 aba3-1 0.61 >More info 0.73 >More info wt Original data GEO bulk
16 downy mildew cotyledons late stage 0.69 >More info 0.65 >More info mock inoculated Cotyledons Original data GEO bulk
17 sni1 0.68 >More info 0.64 >More info WT Original data GEO bulk
18 +1.6 mM Tween 20 1 h. 0.63 >More info 0.69 >More info +distilled water 1 h. Original data GEO bulk
19 tbf1-SA -0.71 >More info -0.60 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
20 cpr5 0.61 >More info 0.70 >More info WT seedling Original data GEO bulk
21 PAHs stress 0.71 >More info 0.60 >More info exp control phenanthrene whole plants Original data GEO bulk
22 Cor 24h 0.67 >More info 0.63 >More info Mock 24h Cor Original data GEO bulk
23 Elevated CO2 AMPLE N DAY 0.68 >More info 0.62 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
24 IMI 4mM 0.62 >More info 0.68 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
25 Col whole leaf 5dpi 0.73 >More info 0.57 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
26 WT powdery mildew 0.62 >More info 0.67 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
27 AFB1 0h 0.65 >More info 0.63 >More info Col 0h Leaf Original data GEO bulk
28 pepr1-1 Pepr2-3 +Pep2 10h -0.74 >More info -0.54 >More info WT +Pep2 10h Pep2 Original data GEO bulk
29 S15-118 0.60 >More info 0.68 >More info wt Original data GEO bulk
30 SA 0.68 >More info 0.59 >More info WT mock Whole seedling Original data GEO bulk
31 Mutant gh3.5-1D (AvrRpt2) 0.70 >More info 0.57 >More info Col-0 (AvrRpt2) Original data GEO bulk
32 Mutant siz1-3 0.60 >More info 0.66 >More info Col-0 Original data GEO bulk
33 35S:RPS4 eds1-2 24h -0.66 >More info -0.60 >More info 35S:RPS4 24h leaves Original data
34 siz1-3 control 0.60 >More info 0.66 >More info Col-0 control Original data GEO bulk
35 Elevated CO2 AMPLE N NIGHT 0.59 >More info 0.66 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
36 S58-2 0.64 >More info 0.61 >More info wt Original data GEO bulk
37 smg7b-1 0.58 >More info 0.67 >More info WT whole plant Original data GEO bulk
38 OH1 0.61 >More info 0.64 >More info Col-0 leaves Original data GEO bulk
39 seedlings-week-old RECA1-overexpressing
transgenic		 0.61 >More info 0.64 >More info seedlings-week-old Col-0 seedlings Original data
40 Mutant NahG(leaf) -0.59 >More info -0.66 >More info Col-0 (leaf) Original data GEO bulk
41 Col BTH 0.57 >More info 0.67 >More info Col rosettes Original data GEO bulk
42 BLM+INA 0.72 >More info 0.52 >More info CK BLM and INA seedling Original data
43 mkk1/mkk2 control rep 0.63 >More info 0.61 >More info Col-0 Time 0 rep Original data GEO bulk
44 ceh1 mutant 0.66 >More info 0.57 >More info Parent line Original data
45 CMP 4hr 0.66 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
46 35S:RPS4 eds1-2 8h -0.68 >More info -0.53 >More info 35S:RPS4 8h leaves Original data
47 SLWF infested 0.67 >More info 0.54 >More info SLWF uninfested rosette tissue Original data GEO bulk
48 camta1/2/3 24h cold 0.62 >More info 0.58 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
49 Constans-mutant 0.59 >More info 0.60 >More info Col control above-ground whole plant Original data GEO bulk
50 eds16 whole leaf 5dpi -0.57 >More info -0.62 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
51 oxt6:AtCPSF30 line 0.62 >More info 0.57 >More info oxt6 mutant Original data GEO bulk
52 Mutant siz1-3 (Drought) 0.60 >More info 0.59 >More info Col-0 (Drought) Original data GEO bulk
53 sid2-1 cold -0.54 >More info -0.65 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
54 siz1-3 drought 0.60 >More info 0.59 >More info Col-0 drought Original data GEO bulk
55 abi4 vtc2 (I) 0.66 >More info 0.52 >More info Col (I) rosette Original data GEO bulk
56 camta1/3 warm 0.55 >More info 0.62 >More info WT warm entire aerial part Original data GEO bulk
57 Col-0 INA 6d 0.52 >More info 0.65 >More info Col-0 MOCK 6d Original data GEO bulk
58 B.cinerea 18 h infection 0.62 >More info 0.55 >More info Mock 18 h Original data Botrytis cinerea infection
59 Botrytis cinerea 18h 0.62 >More info 0.55 >More info control 18h Original data GEO bulk
60 eds16 whole leaf 0h UI -0.43 >More info -0.74 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
61 sav3-2 shade 0.53 >More info 0.63 >More info Col-0 shade seedlings Original data GEO bulk
62 Col ozone 2d 0.63 >More info 0.53 >More info Col clean-air 2d ozone Original data GEO bulk
63 Mutant sav3-2 (SH) 0.53 >More info 0.63 >More info Col-0 (SH) Original data GEO bulk
64 camta1/2/3 warm 0.59 >More info 0.57 >More info WT warm entire aerial part Original data GEO bulk
65 Col-0 under 4 days salt 0.61 >More info 0.54 >More info Col-0 under control 4 days salt treatment rosette Original data
66 vte2-1 3d vernalization 0.61 >More info 0.54 >More info WT 3d vernalization Original data GEO bulk
67 Fenclorim 4hr 0.63 >More info 0.52 >More info Acetone 4hr root Original data GEO bulk
68 CMV-WT 0.55 >More info 0.59 >More info Mock-At Aerial tissues Original data GEO bulk
69 RPL18 TuMV inoculated total RNA 0.59 >More info 0.55 >More info mock inoculated total RNA PO Original data GEO bulk
70 pvip1 pvip2 0.60 >More info 0.54 >More info Col-0 whole rosettes Original data GEO bulk
71 R. solani AG8 0.64 >More info 0.50 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
72 camta3-2 0.58 >More info 0.55 >More info WT Original data GEO bulk
73 camta2/3 warm 0.53 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
74 20d after anthesis 0.62 >More info 0.51 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
75 WT 1wk -P 0.70 >More info 0.43 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
76 OE WRKY40.4 -0.58 >More info -0.55 >More info OE WRKY40.4 none leaf Original data GEO bulk
77 Col whole leaf 5 dpi 0.55 >More info 0.58 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
78 atmyc2 Seedling Dark -0.63 >More info -0.50 >More info WT Seedling Dark Original data GEO bulk
79 Col0-PsmES4326-24hpi 0.52 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
80 toc1-1-57hr 0.58 >More info 0.55 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
81 ex1 flu dark 8hours/30 minute light -0.49 >More info -0.64 >More info col dark 8hours/30 minute light Original data GEO bulk
82 edr1 18 h powdery mildew 0.48 >More info 0.65 >More info Col-0 18 h powdery mildew Original data GEO bulk
83 35S::PI ap3-3 35S::AP-GR +DEX 0.52 >More info 0.60 >More info 0hr DEX Original data GEO bulk
84 pmr4-1 control 0.50 >More info 0.62 >More info WT control uninoculated Original data GEO bulk
85 eds16 whole leaf 7d UI -0.46 >More info -0.65 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
86 lht1 PstDC3000 48h 0.54 >More info 0.57 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
87 Lipopolysaccaride4 h (leaf) 0.60 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
88 pho1 0.73 >More info 0.37 >More info Col2WT Original data GEO bulk
89 Col whole leaf 7dpi 0.50 >More info 0.60 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
90 CMP 24hr 0.61 >More info 0.49 >More info Acetone 24hr root Original data GEO bulk
91 atmospheric CO2 low Mg shoot 0.73 >More info 0.37 >More info atmospheric CO2 normal Mg shoot Shoot Original data
92 dicamba 0.65 >More info 0.45 >More info WT mock whole seedling Original data GEO bulk
93 Col-0 48 hpi 0.42 >More info 0.68 >More info Col-0 uninoculated Original data GEO bulk
94 SA 3h 0.55 >More info 0.54 >More info EtOH 3h 3hr Original data GEO bulk
95 AgNO3 3 h 0.64 >More info 0.45 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
96 upf3 0.57 >More info 0.52 >More info WT whole plant Original data GEO bulk
97 coi1-16 ein2 sid2 ctrl -0.73 >More info -0.36 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
98 mkk1/mkk2 24h BTH rep 0.52 >More info 0.57 >More info Col-0 24h BTH rep Original data GEO bulk
99 toc1-1-81hr 0.60 >More info 0.49 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
100 sfr3 cold 0.57 >More info 0.51 >More info WT cold All aerial tissue Original data GEO bulk
101 pmr5 pmr6 0.50 >More info 0.58 >More info Col-0 Original data GEO bulk
102 Tsu -Fe 48h Shoots 0.60 >More info 0.48 >More info Tsu +Fe 24h Shoots Original data GEO bulk
103 P.syringae AvrRpt2 4 h (leaf) 0.49 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
104 sid2 -0.37 >More info -0.71 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
105 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.67 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
106 bio4-1 mutant watered00µM biotin leaves -0.53 >More info -0.54 >More info bio4-1 mutant leaves leaves Original data GEO bulk
107 Phytoprostane A1 4 h 0.58 >More info 0.49 >More info Col-0 Original data GEO bulk
108 CLO 4mM 0.69 >More info 0.37 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
109 Atwrky63 -0.66 >More info -0.40 >More info Col0 none leaf Original data GEO bulk
110 wrky33 Bc inoculation 14h 0.70 >More info 0.36 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
111 RPL18 TuMV inoculated polysomal RNA 0.50 >More info 0.56 >More info mock inoculated polysomal RNA PO Original data GEO bulk
112 GST NPP1 4 h (leaf) 0.65 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
113 Te ozone 0.70 >More info 0.36 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
114 D2O 0.66 >More info 0.40 >More info H2O seedling Original data GEO bulk
115 Cocultivation 8 hrs root 0.64 >More info 0.42 >More info Mock cocultivation 8 hrs root Root Original data
116 pmr4-1 powdery mildew 0.47 >More info 0.59 >More info WT powdery mildew uninoculated Original data GEO bulk
117 del1-1 mutant 5d uninfected 0.39 >More info 0.67 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
118 8hr-pH4.5 0.60 >More info 0.45 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
119 KCl germinant -0.53 >More info -0.52 >More info Millipore Water germinant KCl seedling Original data
120 Light 3day wt -0.53 >More info -0.52 >More info 0h wt Original data
121 Heat shock optimum 0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
122 Col ozone 3h 0.58 >More info 0.47 >More info Col clean-air 3h ozone Original data GEO bulk
123 WT 1mM phosphate 8 hours. -0.66 >More info -0.38 >More info WT control (not supplemented). Original data
124 Col whole leaf amplified 5 dpi 0.45 >More info 0.59 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
125 TiO2 germinant -0.59 >More info -0.44 >More info Millipore Water germinant TiO2 seedling Original data
126 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.70 >More info 0.33 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
127 arf2 mock 0.55 >More info 0.48 >More info Col mock Original data GEO bulk
128 Mutant ufo-1(flower) 0.54 >More info 0.49 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
129 smg5-2 0.58 >More info 0.45 >More info WT whole plant Original data GEO bulk
130 Mutant arf2 (etiol) 0.55 >More info 0.48 >More info Col (etiol) Original data GEO bulk
131 WT +Pep2 10h 0.65 >More info 0.38 >More info WT untreated Pep2 Original data GEO bulk
132 myb50 cork -0.65 >More info -0.38 >More info wt cork cork Original data GEO bulk
133 glk1 glk2 GLK1-GR +DEX 24h -0.72 >More info -0.31 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
134 SA 4mM 0.68 >More info 0.35 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
135 eds16 whole leaf 3dpi -0.41 >More info -0.62 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
136 coi1-2 0.43 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
137 bio4-1 mutant leaves 0.46 >More info 0.57 >More info WT leaves leaves Original data GEO bulk
138 atmyc2 cop1 Seedling BL 0.47 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
139 Selenate (shoot) 0.63 >More info 0.39 >More info Ws (shoot) Original data GEO bulk
140 tga2 tga5 tga6 ctrl -0.73 >More info -0.29 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) control Original data
141 QC pSCR 8h BL -0.68 >More info -0.34 >More info QC pSCR 0h BL brassinosteroid root Original data
142 DFPM 0.63 >More info 0.39 >More info control Original data GEO bulk
143 Shoot Selenate 0.63 >More info 0.39 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
144 GST 4 h (leaf) 0.69 >More info 0.33 >More info Mock 4 h (leaf) Original data Elicitor treatments
145 5-Triiodobenzoic acid3 h 0.55 >More info 0.46 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
146 csn5 (csn5a-2 csn5b) light 0.57 >More info 0.44 >More info WT light Original data GEO bulk
147 gpa1 +ABA LF 0.41 >More info 0.60 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
148 46T-CK 0.40 >More info 0.61 >More info WT-CK none Original data
149 brm-101 0.58 >More info 0.42 >More info Ler Original data GEO bulk
150 rosette leaves fdh 0.61 >More info 0.39 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
151 aox1a:rpoTmp untreated 0.57 >More info 0.43 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
152 SCR-GR Time 1H Dex 0.58 >More info 0.42 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
153 PNO8 3 h 0.60 >More info 0.40 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
154 efr-1 +elf18 10h -0.53 >More info -0.47 >More info WT +elf18 10h elf18 Original data GEO bulk
155 ataf1-1 mutant Col-0 Bgh inoculated 0.56 >More info 0.44 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
156 Mutant ga1-5 -0.53 >More info -0.47 >More info Ler-1 Original data Comparison of plant hormone related mutant
157 -Sulfate 24 h 0.39 >More info 0.61 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
158 Octopus overexpressor 35SDYG25 0.48 >More info 0.52 >More info WS Original data GEO bulk
159 npr1-1 SA -0.60 >More info -0.39 >More info Col-0 SA complete seedling Original data
160 Osmotic Stress 24 h (shoot) 0.64 >More info 0.35 >More info Stress mock 24 h (shoot) Original data Stress treatments
161 Elevated CO2 fully expanded leaf 0.62 >More info 0.37 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
162 CT101 ozone 0.67 >More info 0.32 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
163 R. solani AG2-1 0.56 >More info 0.43 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
164 root Dosed gold 0.58 >More info 0.41 >More info root No gold .125 mM gold 24 h roots Original data
165 tor mutant glucose 0.67 >More info 0.32 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
166 0.125 mM gold 24 h 0.58 >More info 0.41 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
167 phyB mutant 22C 10hrs -0.38 >More info -0.61 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
168 vtc2 (I) 0.48 >More info 0.51 >More info Col (I) rosette Original data GEO bulk
169 wavy 0.49 >More info 0.50 >More info WT Original data GEO bulk
170 16C 4hs -0.56 >More info -0.42 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
171 bak1-3 +Pep2 10h 0.55 >More info 0.43 >More info WT +Pep2 10h Pep2 Original data GEO bulk
172 ani1 T16 -0.63 >More info -0.35 >More info WT T16 root tissue Original data GEO bulk
173 Col-0 ozone 0.70 >More info 0.28 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
174 35:SUB1A 0.60 >More info 0.38 >More info WT whole seedling Original data GEO bulk
175 coi1-16 ein2 sid2 ozone 0.70 >More info 0.28 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
176 SA 24h 0.46 >More info 0.52 >More info EtOH 24h 24hr Original data GEO bulk
177 Col-0 low oxygen 0.62 >More info 0.35 >More info Col-0 control low oxygen root Original data GEO bulk
178 npr1 sni1 ssn2 -0.70 >More info -0.27 >More info npr1 sni1 water water seedling Original data GEO bulk
179 sdg2 0.54 >More info 0.43 >More info wt seedling Original data GEO bulk
180 2hr continuous KNO3 and MSX and Gln PeR cell -0.73 >More info -0.24 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
181 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark -0.52 >More info -0.45 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
182 A. thaliana-A. lyrata hybrid -0.59 >More info -0.38 >More info A. thaliana mature leaves before flowering Original data GEO bulk
183 Col laser microdissected 5 dpi 0.52 >More info 0.45 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
184 dense canopy 0.57 >More info 0.40 >More info single (control) petiole Original data GEO bulk
185 arp6-10 12 ºC 0.60 >More info 0.37 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
186 Mutant sav3-2 (WL) 0.36 >More info 0.61 >More info Col-0 (WL) Original data GEO bulk
187 siliques AtHb1 control 0.45 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
188 amiR-tor induced 3d 0.46 >More info 0.51 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
189 sav3-2 light 0.36 >More info 0.61 >More info Col-0 light seedlings Original data GEO bulk
190 UV 0.51 >More info 0.45 >More info WT aerial region Original data GEO bulk
191 Chitosan 3h Treatment 0.58 >More info 0.38 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
192 ex1ex2flu dark 8hours/30 minute light -0.45 >More info -0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
193 Whole root - low pH 12H 0.43 >More info 0.53 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
194 cat2-hCO2 -0.52 >More info -0.43 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
195 albino Ds13-2198-1 -0.52 >More info -0.43 >More info control Original data GEO bulk
196 WT 3h -P 0.58 >More info 0.37 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
197 P-chlorophenoxy- isobutyric acid 3 h 0.54 >More info 0.41 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
198 IRP1-OE-Ctrl--shoot 0.70 >More info 0.25 >More info COL-0-Ctrl--shoot shoot Original data
199 Salicylic Acid 3 h 0.29 >More info 0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
200 msh1 albino 0.44 >More info 0.51 >More info WT aerial part Original data GEO bulk
201 eds16 whole leaf 6hpi -0.38 >More info -0.56 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
202 GO5; 0h switch to ambient CO2 concentrations; -0.65 >More info -0.29 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
203 WT-drought 0.63 >More info 0.31 >More info WT-control leaf Original data
204 Mutant ufo-1(shoot apex) 0.60 >More info 0.34 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
205 oas-a1.1 Cd 18h 0.34 >More info 0.60 >More info Cd 18h root Root Original data GEO bulk
206 Botrytis cinerea 48h 0.36 >More info 0.58 >More info control 48h Original data GEO bulk
207 WT +elf18 10h 0.54 >More info 0.39 >More info WT untreated elf18 Original data GEO bulk
208 nNOS-drought -0.55 >More info -0.38 >More info WT-drought leaf Original data
209 NahG -0.26 >More info -0.67 >More info Col-0 Leaves Original data GEO bulk
210 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.52 >More info -0.41 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
211 apl 0.59 >More info 0.34 >More info WT phloem Original data
212 upf1 0.52 >More info 0.40 >More info WT whole plant Original data GEO bulk
213 Stem tissue 2 days NAA 0.53 >More info 0.39 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
214 toc1-1-77hr 0.55 >More info 0.37 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
215 GA 0.54 >More info 0.38 >More info none GA Rosette Original data GEO bulk
216 iae1 -0.55 >More info -0.37 >More info B179 Original data GEO bulk
217 6h +Pi -0.53 >More info -0.39 >More info 6h -Pi root Original data GEO bulk
218 lht1 untreated 0.36 >More info 0.56 >More info WT untreated untreated leaf Original data GEO bulk
219 Infected Col-0 leaf 0.60 >More info 0.32 >More info Mock Col-0 leaf F. oxysporum leaf Original data GEO bulk
220 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.50 >More info -0.42 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
221 WT 30μM arsenate 8 hours. 0.61 >More info 0.31 >More info WT control (not supplemented). Original data
222 Primisulfuron EC50 0.51 >More info 0.40 >More info Carrier (primisulfuron) Original data GEO bulk
223 tga2 tga5 tga6 ozone -0.53 >More info -0.38 >More info Col-0 ozone- (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
224 C24 ozone 0.63 >More info 0.28 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
225 Sulfometuron EC50 0.51 >More info 0.40 >More info Carrier Original data GEO bulk
226 toc1-1-53hr 0.61 >More info 0.30 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
227 xyl-grown cell culture- 1h 1mM Suc -0.33 >More info -0.58 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
228 plant (tga2-5-6) 4h phytoprostane A1 0.58 >More info 0.32 >More info plant (tga2-5-6) 4h control Original data GEO bulk
229 des1 water 0.56 >More info 0.33 >More info WT water water leaf Original data GEO bulk
230 GO5; 8h switch to ambient CO2 concentrations; 0.56 >More info 0.33 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
231 Imidazolinone EC50 0.52 >More info 0.37 >More info Carrier (Imidazolinone) Original data GEO bulk
232 over-tAPX -0.66 >More info -0.23 >More info WT Col Original data GEO bulk
233 seedlings +5AC 0.61 >More info 0.28 >More info control seedlings 10-day old whole seedling Original data GEO bulk
234 Stem tissue 5 days NAA 0.50 >More info 0.39 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
235 4h decapitation -0.50 >More info -0.39 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
236 coi1-2 JA 0.37 >More info 0.52 >More info JA Whole seedling Original data GEO bulk
237 CAX1/CAX3 mutant 0.37 >More info 0.52 >More info Col whole plant Original data GEO bulk
238 abh1 -ABA 0.58 >More info 0.31 >More info Col-0 -ABA Original data GEO bulk
239 phyB Rc50 0.29 >More info 0.60 >More info WT(Ler) Rc50 Original data GEO bulk
240 sid2-1 warm -0.54 >More info -0.34 >More info WT warm entire aerial part Original data GEO bulk
241 4tga mock -0.55 >More info -0.33 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
242 ataf1-1 mutant Col-0 Un-inoculated -0.53 >More info -0.35 >More info WT Col-0 Un-inoculated Original data GEO bulk
243 6-trichlorophenoxyacetic acid 3 h 0.53 >More info 0.35 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
244 root endodermis and quiescent center 40 mM NaCl 0.50 >More info 0.38 >More info root endodermis and quiescent center Original data GEO bulk
245 rsa3-1 Na 24h 0.25 >More info 0.63 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
246 npr1-3 MOCK 48h -0.29 >More info -0.59 >More info Col-0 MOCK 48h Original data GEO bulk
247 cngc4 0.55 >More info 0.32 >More info Ws-2 Seedlings Original data GEO bulk
248 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.56 >More info 0.31 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
249 roottip control pSCR 0.33 >More info 0.54 >More info roottip control total control roottip Original data GEO bulk
250 npr1-1 water 0.52 >More info 0.34 >More info Col-0 water complete seedling Original data
251 csn3-1 light 0.50 >More info 0.36 >More info WT light Original data GEO bulk
252 npr1 sni1 SA 0.50 >More info 0.36 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
253 (Ws-2)+100 uM As 0.56 >More info 0.29 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
254 TNT-seedlings 0.63 >More info 0.22 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
255 S14-150 0.50 >More info 0.34 >More info wt Original data GEO bulk
256 Elevated CO2 expanding leaf 0.54 >More info 0.30 >More info Ambient CO2 expanding leaf expanding leaf Original data
257 Mutant bri1 -0.55 >More info -0.29 >More info Ws-2 Original data Comparison of plant hormone related mutant
258 leaf rlt1-1rlt2-1 -0.50 >More info -0.32 >More info leaf Col-0 leaf Original data GEO bulk
259 anac017-2 AntimycinA 3h -0.52 >More info -0.30 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
260 10min Reillumination IP RNA -0.56 >More info -0.26 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
261 Leafminer damaged seedlings 0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
262 hypoxic 0.57 >More info 0.25 >More info WT aerobic hypoxia Original data GEO bulk
263 Col-0 SA 0.51 >More info 0.30 >More info Col-0 water complete seedling Original data
264 9 hr Hypoxia IP RNA 0.52 >More info 0.29 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
265 COL-0-Fe--shoot 0.63 >More info 0.18 >More info COL-0-Ctrl--shoot shoot Original data
266 scl3 0.56 >More info 0.25 >More info Col-0 whole root Original data GEO bulk
267 2 hr Hypoxia IP RNA 0.61 >More info 0.19 >More info 2 hr Non-Stress IP RNA seedlings Original data GEO bulk
268 shoots bhlh100/101 0uM Fe 0.51 >More info 0.29 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
269 9 hr Hypoxia 1 hr recovery Total RNA 0.54 >More info 0.26 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
270 Sepals stage15 0.53 >More info 0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
271 A. thaliana-A. halleri hybrid -0.51 >More info -0.29 >More info A. thaliana mature leaves before flowering Original data GEO bulk
272 E.orontii Infection 6 h 0.17 >More info 0.63 >More info Uninfection 6 h Original data Elicitor treatments
273 RGA-GR-DEX 0.28 >More info 0.52 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
274 shoot hypoxia p35S -0.30 >More info -0.50 >More info shoot hypoxia total Original data GEO bulk
275 Col in Pi deficiency medium 0.28 >More info 0.52 >More info Col in control medium root Original data GEO bulk
276 E2Fa-Dpa 0.64 >More info 0.15 >More info WT Original data GEO bulk
277 vte2 leaves 120h LT 0.75 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
278 Hydrogen Peroxide 500 uM 0.29 >More info 0.50 >More info Control RB and PER Hydrogen Peroxide Original data
279 SA Treated 0.71 >More info 0.08 >More info Water Original data GEO bulk
280 low CO2 + light 0.50 >More info 0.28 >More info normal CO2 + light Original data GEO bulk
281 gpa1-4/agb1-2 clean-air 2d 0.52 >More info 0.25 >More info Col clean-air 2d clean-air Original data GEO bulk
282 penta Alternaria 3dpi 0.60 >More info 0.17 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
283 Dry midday -0.26 >More info -0.51 >More info Wet midday water-limited whole rosette Original data GEO bulk
284 Dark 40min pls UV-AB 5min 0.51 >More info 0.25 >More info Dark 45 min Original data Light treatments
285 ex2 flu dark 8hours/30 minute light -0.21 >More info -0.55 >More info col dark 8hours/30 minute light Original data GEO bulk
286 gun1gun5 far-red pretreated -0.53 >More info -0.22 >More info WT far-red pretreated Original data GEO bulk
287 Stem wox4 -0.57 >More info -0.18 >More info Stem Col first internode of stem Original data GEO bulk
288 FarRed Light 45min -0.12 >More info -0.63 >More info White Light 45min Original data Light treatments
289 bri1-116 0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
290 IAA/inhibitor A Treated 0.52 >More info 0.22 >More info IAA Treated Original data GEO bulk
291 AAF-OX 0.57 >More info 0.17 >More info Col-0 Rosette leaf Original data GEO bulk
292 PstDC3000 48h 0.07 >More info 0.67 >More info WT untreated 48hr leaf Original data GEO bulk
293 Ibuprofen 3 h 0.50 >More info 0.23 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
294 eds16 whole leaf 1dpi -0.23 >More info -0.50 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
295 irradiated leaf (WT 5d) -0.22 >More info -0.51 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
296 WT seedlings MV 0.50 >More info 0.22 >More info WT seedlings control Seedlings Original data GEO bulk
297 apum23 0.54 >More info 0.17 >More info WT (Col-3) aerial parts Original data GEO bulk
298 Ambient CO2 LIMITING N DAY 0.56 >More info 0.15 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
299 P.p 6hai 0.50 >More info 0.21 >More info At-Control roots Original data GEO bulk
300 low R/FR mock spray -0.61 >More info -0.10 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
301 tor mutant 0.50 >More info 0.21 >More info WT (Col) none seedlings Original data GEO bulk
302 Mutant lfy-12(shoot apex) 0.51 >More info 0.20 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
303 35S:LOB-GR mock 0.56 >More info 0.14 >More info Col mock mock seedling Original data GEO bulk
304 ddm1 F6 inflorescence 0.55 >More info 0.13 >More info wt Col inflorescence unopened flower buds Original data
305 CCA1-ox 6am non-polysomal 0.17 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
306 Total RNA csp1 cold -0.53 >More info -0.14 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
307 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
308 gul2-1 mutant 0.57 >More info 0.10 >More info WT 7 day-old whole seedlings Original data
309 Ws seedlings 0.58 >More info 0.09 >More info ged1 seedlings Original data GEO bulk
310 ged1 seedlings -0.58 >More info -0.09 >More info Ws seedlings Original data GEO bulk
311 ein5-1 ski2-3 0.55 >More info 0.11 >More info Col-0 aerial tissue Original data
312 embryo paclobutrazol 0.50 >More info 0.16 >More info embryo-control paclobutrazol embryo Original data GEO bulk
313 edr1 96 h powdery mildew -0.51 >More info -0.15 >More info Col-0 96 h powdery mildew Original data GEO bulk
314 FOX line K16331 0.58 >More info 0.08 >More info empty vector control (T3) FOX lines Original data GEO bulk
315 E.orontii Infection 3 day 0.07 >More info 0.58 >More info Uninfection 3 day Original data Elicitor treatments
316 2hr transitory KNO3 ECR cell -0.51 >More info -0.13 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
317 DC3000 24h 0.54 >More info 0.10 >More info Mock 24h DC3000 Original data GEO bulk
318 6h volatiles Sm. R3089 0.53 >More info 0.10 >More info 6h untreated whole seedling Original data GEO bulk
319 WT-16ºC -0.53 >More info -0.10 >More info WT-23ºC Original data GEO bulk
320 Col-0 DCA 6d 0.12 >More info 0.51 >More info Col-0 MOCK 6d Original data GEO bulk
321 seedling 3h after Gamma WT 0.60 >More info 0.01 >More info seedling day 1 unirradiated WT 3h Original data
322 seedling 24h after HZE atm-1 0.58 >More info 0.02 >More info seedling day 2 unirradiated atm-1 24h Original data
323 glk1 glk2 GLK1-GR +DEX 4h 0.51 >More info 0.09 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
324 abi4-102 +lincomycin -0.52 >More info -0.08 >More info Col-0 +lincomycin Original data GEO bulk
325 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
326 phyB mutant 16C 4hrs 0.63 >More info -0.04 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
327 seedling 12h after Gamma atm-1 0.51 >More info 0.06 >More info seedling day 1 unirradiated atm-1 12h Original data
328 LEAFY-GR DEX +CHX -0.05 >More info -0.52 >More info LEAFY-GR CHX Dexamethasone plus cycloheximide seedlings Original data GEO bulk
329 Col-0 24hpi A. brassicicola 0.54 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
330 HairpinZ 4 h (leaf) 0.58 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
331 total mRNA eif3k 0.50 >More info 0.04 >More info total mRNA WT aerial part Original data GEO bulk
332 Total RNA 35S:AtCSP1-FH1 cold 0.57 >More info -0.03 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
333 Col PSTDC3000 24h 0.66 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
334 seedling 6h after Gamma WT 0.50 >More info 0.01 >More info seedling day 1 unirradiated WT 6h Original data
335 Laer pretreat GA Flg22 1h -0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
336 IAA7mII over-expressor IAA Treated -0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
337 GST-overexpression seedlings control 0.53 >More info -0.10 >More info WT seedlings control Seedlings Original data
338 long 17-degree- -0.17 >More info 0.54 >More info control long Original data GEO bulk
339 Full AC2 T1 -0.50 >More info 0.14 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
340 elf3-7-23ºC -0.54 >More info 0.20 >More info WT-23ºC Original data GEO bulk
341 Light 3day hml -0.38 >More info 0.69 >More info 0h hml Original data
342 2hr transitory KNO3 PrR cell 0.50 >More info -0.34 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk