4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on scl3
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "scl3"  Help Download transcriptome of top 30
Score Experiment Correlation from
scl3
Correlation to
scl3
Control Experiment Genotype Treatment Tissue Link to
original data
Experimental
Category
Data set
Details
1 scl3 1.00 >More info 1.00 >More info Col-0 whole root Original data GEO bulk
2 lht1 PstDC3000 48h 0.45 >More info 0.56 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
3 pepr1-1 Pepr2-3 untreated 0.25 >More info 0.76 >More info WT untreated untreated Original data GEO bulk
4 Col-0 overexpressing At1g54160 control 0.55 >More info 0.45 >More info WT no treatement Original data GEO bulk
5 At1g54160 ox 0.55 >More info 0.45 >More info Col-0 Original data GEO bulk
6 WT roots - Fe 0.29 >More info 0.71 >More info WT roots + Fe Roots Original data GEO bulk
7 root - 04% oxygen - 48h 0.35 >More info 0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
8 seedlings by volatiles from leafminer damaged
Lima bean 48h
0.40 >More info 0.58 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
9 B.cinerea 18 h infection 0.19 >More info 0.75 >More info Mock 18 h Original data Botrytis cinerea infection
10 root - 01% oxygen - 48h 0.32 >More info 0.62 >More info root - 21% oxygen - 48h Original data GEO bulk
11 PAHs stress 0.35 >More info 0.59 >More info exp control phenanthrene whole plants Original data GEO bulk
12 Botrytis cinerea 18h 0.19 >More info 0.75 >More info control 18h Original data GEO bulk
13 bak1-3 untreated 0.25 >More info 0.68 >More info WT untreated untreated Original data GEO bulk
14 35S::PI ap3-3 35S::AP-GR +DEX 0.28 >More info 0.64 >More info 0hr DEX Original data GEO bulk
15 lht1 untreated 0.36 >More info 0.55 >More info WT untreated untreated leaf Original data GEO bulk
16 Mutant iaa5_6_19 0.31 >More info 0.60 >More info Col Original data GEO bulk
17 Laer pretreat GA Flg22 1h 0.18 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
18 Aerobic e1 ate2 0.32 >More info 0.55 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
19 apk1 apk2 0.35 >More info 0.52 >More info Col0-control whole rosette Original data GEO bulk
20 Mutant siz1-3 0.32 >More info 0.54 >More info Col-0 Original data GEO bulk
21 siz1-3 control 0.32 >More info 0.54 >More info Col-0 control Original data GEO bulk
22 3x(m) -0.22 >More info -0.64 >More info 2x two week old seedlings Original data
23 P-chlorophenoxy- isobutyric acid 3 h 0.30 >More info 0.53 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
24 WT Shoot Hypoxia 0.16 >More info 0.67 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
25 shoot hypoxia total 0.26 >More info 0.57 >More info shoot control total Original data GEO bulk
26 Heat shock optimum 0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
27 Aerobic prt6 0.20 >More info 0.62 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
28 Col BTH 0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
29 bZIP1ko mutant N+Light- 0.22 >More info 0.60 >More info WT-sib N+Light- whole plant Original data GEO bulk
30 npr1-3 DCA 48h 0.25 >More info 0.56 >More info npr1-3 MOCK 48h Original data GEO bulk
31 seedling 24h after Gamma atm-1 0.26 >More info 0.55 >More info seedling day 2 unirradiated atm-1 24h Original data
32 long 17-degree- 0.06 >More info 0.74 >More info control long Original data GEO bulk
33 Col0-PsmES4326-24hpi 0.19 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
34 MPK6 ox Shoot Hypoxia 0.25 >More info 0.55 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
35 Elevated CO2 AMPLE N NIGHT 0.22 >More info 0.58 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
36 WT powdery mildew 0.23 >More info 0.56 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
37 Imidazolinone EC50 0.28 >More info 0.51 >More info Carrier (Imidazolinone) Original data GEO bulk
38 Whole root - S 3H 0.15 >More info 0.62 >More info Whole root - S 0H Original data GEO bulk
39 aba3-1 0.23 >More info 0.54 >More info wt Original data GEO bulk
40 Shoot -Cs 0.17 >More info 0.59 >More info Control-shoot Original data GEO bulk
41 del1-1 5dpi 0.05 >More info 0.70 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
42 det2 light-dark -0.16 >More info -0.58 >More info det2 light light-dark Original data GEO bulk
43 elf3-7-16ºC 0.21 >More info 0.53 >More info WT-16ºC Original data GEO bulk
44 del1-1 mutant 5d uninfected 0.18 >More info 0.54 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
45 COL-0-Fe--shoot 0.22 >More info 0.50 >More info COL-0-Ctrl--shoot shoot Original data
46 root - 04% oxygen - 2h -0.08 >More info 0.78 >More info root - 21% oxygen - 2h Original data GEO bulk
47 Leafminer damaged seedlings 0.14 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
48 cop1 Seedling BL 0.19 >More info 0.51 >More info WT Seedling BL Original data GEO bulk
49 csn5 (csn5a-2 csn5b) light 0.19 >More info 0.50 >More info WT light Original data GEO bulk
50 Col-0 V. longisporum-inoculated 48 hpi 0.11 >More info 0.58 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
51 Red/FR Light45min 0.03 >More info 0.65 >More info FarRed Light 45min Original data Light treatments
52 gun1gun5 far-red pretreated -0.11 >More info -0.57 >More info WT far-red pretreated Original data GEO bulk
53 JA 3h 0.07 >More info 0.60 >More info EtOH 3h 3hr Original data GEO bulk
54 long 12-degree- 0.13 >More info 0.53 >More info control long Original data GEO bulk
55 ptpks2 0.14 >More info 0.52 >More info Col-WT leaves Original data GEO bulk
56 seed germinating in countinuous light 24h SL -0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
57 CDB1-Knockout 0.14 >More info 0.51 >More info WT Original data GEO bulk
58 chl1-5 Nitrate 0.5h 0.03 >More info 0.62 >More info WT Nitrate 0.5h Original data GEO bulk
59 Methyl Jasmonate 0.5 h 0.11 >More info 0.53 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
60 downy mildew cotyledons late stage 0.12 >More info 0.52 >More info mock inoculated Cotyledons Original data GEO bulk
61 essp4/sdg8-5 mutant 0.14 >More info 0.50 >More info wild type leaf Original data GEO bulk
62 4C 1h -0.13 >More info -0.50 >More info 4C 0h Original data GEO bulk
63 Botrytis cinerea 48h 0.13 >More info 0.50 >More info control 48h Original data GEO bulk
64 tetraploid -0.08 >More info -0.54 >More info diploid Original data GEO bulk
65 Pst-DC3000(hrpA)-4hpi -0.11 >More info -0.51 >More info Pst-DC3000-4hpi Original data GEO bulk
66 Glyphosate EC50 0.10 >More info 0.52 >More info Carrier (Glyphosate) Original data GEO bulk
67 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
68 NJ15 0.10 >More info 0.50 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
69 dense canopy 0.06 >More info 0.53 >More info single (control) petiole Original data GEO bulk
70 ahg1-1 -0.03 >More info -0.56 >More info ABA control Original data GEO bulk
71 bri1-116 -0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
72 ceh1 mutant 0.08 >More info 0.51 >More info Parent line Original data
73 Shoot apex inflorescence (after bolting) -0.07 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
74 Stem tissue 5 days NAA 0.07 >More info 0.50 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
75 atmyc2 cop1 Seedling BL 0.01 >More info 0.56 >More info WT Seedling BL Original data GEO bulk
76 PNO8 3 h 0.01 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
77 9m.KNO3 0.02 >More info 0.50 >More info To. KNO3 14 day old Roots Original data GEO bulk
78 rsa3-1 Na 24h -0.09 >More info 0.60 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
79 vte2-1 3d vernalization -0.06 >More info 0.57 >More info WT 3d vernalization Original data GEO bulk
80 Col-0 DCA 48h -0.02 >More info 0.52 >More info Col-0 MOCK 48h Original data GEO bulk
81 smg7b-1 -0.01 >More info 0.51 >More info WT whole plant Original data GEO bulk
82 tmm1-inflorescence-tips -0.02 >More info 0.51 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
83 root - 08% oxygen - 2h -0.08 >More info 0.56 >More info root - 21% oxygen - 2h Original data GEO bulk
84 Selenate (shoot) -0.08 >More info 0.55 >More info Ws (shoot) Original data GEO bulk
85 Shoot Selenate -0.08 >More info 0.55 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
86 erf104-ko H2O 4h -0.04 >More info 0.50 >More info Col-0 H2O 4h Original data GEO bulk
87 SA 4mM -0.06 >More info 0.52 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
88 root - 08% oxygen - 30min -0.12 >More info 0.58 >More info root - 21% oxygen - 30min Original data GEO bulk
89 seedling 24h after Gamma WT -0.10 >More info 0.55 >More info seedling day 2 unirradiated WT 24h Original data
90 hsfa1 quadruple mutant 0.06 >More info -0.51 >More info WT (Col-0) whole seedling Original data GEO bulk
91 CCA1-ox 6am non-polysomal -0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
92 ex1 flu dark 8hours/30 minute light 0.12 >More info -0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
93 cop1 Seedling BL+ABA -0.11 >More info 0.50 >More info WT Seedling BL+ABA Original data GEO bulk
94 root - 01% oxygen - 30min -0.21 >More info 0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
95 root - 04% oxygen - 30min -0.23 >More info 0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
96 siliques AtHb1 control -0.27 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk