4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Shoot -Cs
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Shoot -Cs"  Help Download transcriptome of top 30
Score Experiment Correlation from
Shoot -Cs		 Correlation to
Shoot -Cs		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Shoot -Cs 1.00 >More info 1.00 >More info Control-shoot Original data GEO bulk
2 B.cinerea 18 h infection 0.90 >More info 0.88 >More info Mock 18 h Original data Botrytis cinerea infection
3 Botrytis cinerea 18h 0.90 >More info 0.88 >More info control 18h Original data GEO bulk
4 Botrytis cinerea 48h 0.87 >More info 0.80 >More info control 48h Original data GEO bulk
5 IMI 4mM 0.90 >More info 0.76 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
6 ataf1-1 mutant Col-0 Bgh inoculated 0.87 >More info 0.77 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
7 gh3.5-1D 48 hpi 0.89 >More info 0.74 >More info Col-0 uninoculated Original data GEO bulk
8 WT Col-0 Bgh inoculated 0.86 >More info 0.77 >More info WT Col-0 Un-inoculated Original data GEO bulk
9 del1-1 mutant 5d uninfected 0.83 >More info 0.79 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
10 Cor 10h 0.86 >More info 0.76 >More info Mock 10h Cor Original data GEO bulk
11 cpr5npr1 0.81 >More info 0.77 >More info WT(COL) Original data GEO bulk
12 35S::PI ap3-3 35S::AP-GR +DEX 0.82 >More info 0.76 >More info 0hr DEX Original data GEO bulk
13 PAHs stress 0.82 >More info 0.75 >More info exp control phenanthrene whole plants Original data GEO bulk
14 AvrRpt2 Col-0 6hpi 0.88 >More info 0.68 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
15 Cor 24h 0.80 >More info 0.76 >More info Mock 24h Cor Original data GEO bulk
16 Col-0 9 hpi A. brassicicola 0.87 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
17 Fenclorim 4hr 0.89 >More info 0.67 >More info Acetone 4hr root Original data GEO bulk
18 WT powdery mildew 0.80 >More info 0.76 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
19 P.syringae AvrRpt2 4 h (leaf) 0.83 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
20 mkk1/mkk2 24h BTH rep 0.82 >More info 0.74 >More info Col-0 24h BTH rep Original data GEO bulk
21 Elevated CO2 AMPLE N NIGHT 0.78 >More info 0.77 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
22 ein2-1 9 hpi A. brassicicola 0.87 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
23 S15-118 0.80 >More info 0.75 >More info wt Original data GEO bulk
24 Mutant gh3.5-1D (AvrRpt2) 0.84 >More info 0.71 >More info Col-0 (AvrRpt2) Original data GEO bulk
25 WT-SA 0.83 >More info 0.72 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
26 DC3000 24h 0.83 >More info 0.72 >More info Mock 24h DC3000 Original data GEO bulk
27 eds16 whole leaf 5dpi -0.79 >More info -0.75 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
28 Col whole leaf 7dpi 0.78 >More info 0.76 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
29 lht1 PstDC3000 48h 0.83 >More info 0.71 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
30 GO5; 8h switch to ambient CO2 concentrations; 0.84 >More info 0.70 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
31 mkk1/mkk2 control rep 0.79 >More info 0.75 >More info Col-0 Time 0 rep Original data GEO bulk
32 35S:RPS4 eds1-2 24h -0.85 >More info -0.68 >More info 35S:RPS4 24h leaves Original data
33 ceh1 mutant 0.85 >More info 0.68 >More info Parent line Original data
34 cpr5npr1svi1 0.73 >More info 0.80 >More info WT(COL) Original data GEO bulk
35 Glyphosate EC50 0.85 >More info 0.68 >More info Carrier (Glyphosate) Original data GEO bulk
36 Col whole leaf 5dpi 0.79 >More info 0.74 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
37 CMP 24hr 0.88 >More info 0.65 >More info Acetone 24hr root Original data GEO bulk
38 35S:RPS4 eds1-2 8h -0.85 >More info -0.68 >More info 35S:RPS4 8h leaves Original data
39 HopZ1a treated 0.83 >More info 0.69 >More info col Original data GEO bulk
40 SLWF infested 0.83 >More info 0.69 >More info SLWF uninfested rosette tissue Original data GEO bulk
41 cpr5scv1 0.80 >More info 0.71 >More info WT(COL) Original data GEO bulk
42 S58-2 0.84 >More info 0.67 >More info wt Original data GEO bulk
43 Sulfometuron EC50 0.89 >More info 0.62 >More info Carrier Original data GEO bulk
44 ice1 control 0.83 >More info 0.67 >More info WT control Original data GEO bulk
45 Imidazolinone EC50 0.79 >More info 0.71 >More info Carrier (Imidazolinone) Original data GEO bulk
46 E.coli TUV86 2 fliC 7h 0.84 >More info 0.66 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
47 Col ozone 2d 0.79 >More info 0.71 >More info Col clean-air 2d ozone Original data GEO bulk
48 efr-1 +elf18 10h -0.79 >More info -0.71 >More info WT +elf18 10h elf18 Original data GEO bulk
49 edr1 18 h powdery mildew 0.82 >More info 0.68 >More info Col-0 18 h powdery mildew Original data GEO bulk
50 flu over-tAPX 0.81 >More info 0.68 >More info WT Col Original data GEO bulk
51 sid2 -0.71 >More info -0.78 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
52 aba3-1 0.78 >More info 0.71 >More info wt Original data GEO bulk
53 RPL18 TuMV inoculated total RNA 0.78 >More info 0.71 >More info mock inoculated total RNA PO Original data GEO bulk
54 npr1-3 DCA 48h 0.77 >More info 0.72 >More info npr1-3 MOCK 48h Original data GEO bulk
55 col-5 hrpA 12h 0.80 >More info 0.69 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
56 Laer treat paclobutrazol (PAC) 0.85 >More info 0.64 >More info Laer Control leaf discs Original data GEO bulk
57 hrpA 7h 0.84 >More info 0.65 >More info Mock 7h hrpA Original data GEO bulk
58 penta Alternaria 3dpi 0.90 >More info 0.59 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
59 CMP 4hr 0.87 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
60 Mature callus 0.86 >More info 0.62 >More info Young callus hypocotyls Original data GEO bulk
61 Col0-PsmES4326-24hpi 0.87 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
62 Shoot -K 0.77 >More info 0.71 >More info Control-shoot Original data GEO bulk
63 K starvation (shoot) 0.77 >More info 0.71 >More info Ws (shoot) Original data GEO bulk
64 pmr5 pmr6 0.79 >More info 0.68 >More info Col-0 Original data GEO bulk
65 CLO 4mM 0.86 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
66 Col-0 INA 48h 0.72 >More info 0.75 >More info Col-0 MOCK 48h Original data GEO bulk
67 Col-0 under 4 days salt 0.86 >More info 0.61 >More info Col-0 under control 4 days salt treatment rosette Original data
68 lht1 untreated 0.77 >More info 0.70 >More info WT untreated untreated leaf Original data GEO bulk
69 flu 0.83 >More info 0.63 >More info WT Col Original data GEO bulk
70 cat2-2; 8h switch to ambient CO2 concentrations; 0.89 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
71 hrcC 0.81 >More info 0.65 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
72 UV 0.85 >More info 0.61 >More info WT aerial region Original data GEO bulk
73 cpr5 0.80 >More info 0.66 >More info WT seedling Original data GEO bulk
74 pmr5 0.77 >More info 0.69 >More info Col-0 Original data GEO bulk
75 seedlings-week-old RECA1-overexpressing
transgenic		 0.80 >More info 0.66 >More info seedlings-week-old Col-0 seedlings Original data
76 Mutant siz1-3 0.79 >More info 0.66 >More info Col-0 Original data GEO bulk
77 cpr5 0.77 >More info 0.68 >More info WT(COL) Original data GEO bulk
78 HopZ1a treated ulp1c ulp1d 0.81 >More info 0.64 >More info col Original data GEO bulk
79 siz1-3 control 0.79 >More info 0.66 >More info Col-0 control Original data GEO bulk
80 camta1/2/3 warm 0.80 >More info 0.65 >More info WT warm entire aerial part Original data GEO bulk
81 nia1nia2 0.81 >More info 0.64 >More info Col-0 whole seedlings Original data GEO bulk
82 DFPM 0.85 >More info 0.60 >More info control Original data GEO bulk
83 RPL18 TuMV inoculated polysomal RNA 0.78 >More info 0.66 >More info mock inoculated polysomal RNA PO Original data GEO bulk
84 msh1 albino 0.84 >More info 0.60 >More info WT aerial part Original data GEO bulk
85 anac017-2 AntimycinA 3h -0.82 >More info -0.62 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
86 vte2-1 3d vernalization 0.81 >More info 0.63 >More info WT 3d vernalization Original data GEO bulk
87 Col ozone 3h 0.81 >More info 0.63 >More info Col clean-air 3h ozone Original data GEO bulk
88 SA 4mM 0.85 >More info 0.59 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
89 Osmotic Stress 24 h (shoot) 0.80 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
90 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.79 >More info 0.64 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
91 pvip1 pvip2 0.75 >More info 0.68 >More info Col-0 whole rosettes Original data GEO bulk
92 Primisulfuron EC50 0.83 >More info 0.60 >More info Carrier (primisulfuron) Original data GEO bulk
93 Mutant siz1-3 (Drought) 0.85 >More info 0.58 >More info Col-0 (Drought) Original data GEO bulk
94 UV Stress 24 h (shoot) 0.74 >More info 0.69 >More info Stress mock 24 h (shoot) Original data Stress treatments
95 AgNO3 3 h 0.83 >More info 0.60 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
96 siz1-3 drought 0.85 >More info 0.58 >More info Col-0 drought Original data GEO bulk
97 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.87 >More info 0.55 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
98 CMV-WT 0.77 >More info 0.65 >More info Mock-At Aerial tissues Original data GEO bulk
99 downy mildew cotyledons late stage 0.73 >More info 0.69 >More info mock inoculated Cotyledons Original data GEO bulk
100 WT in -N 0.79 >More info 0.63 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
101 Elevated CO2 AMPLE N DAY 0.74 >More info 0.68 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
102 Col leaves 48h LT 0.85 >More info 0.56 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
103 DC3000 2 h (leaf) 0.76 >More info 0.65 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
104 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.87 >More info 0.54 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
105 Te ozone 0.85 >More info 0.56 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
106 Triazolopyrimidine EC50 0.85 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
107 IRP1-OE-Ctrl--shoot 0.85 >More info 0.56 >More info COL-0-Ctrl--shoot shoot Original data
108 npr1-1 SA -0.82 >More info -0.59 >More info Col-0 SA complete seedling Original data
109 pnp1-1 3h +P 0.82 >More info 0.59 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
110 WT-NOCO2 INFECTED 0.79 >More info 0.61 >More info WT-MOCK Original data GEO bulk
111 OH1 0.73 >More info 0.67 >More info Col-0 leaves Original data GEO bulk
112 24h volatiles Sm. R3089 -0.75 >More info -0.65 >More info 24h untreated whole seedling Original data GEO bulk
113 Col-0-avrB-6h 0.84 >More info 0.56 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
114 PBZ 0.75 >More info 0.64 >More info none PBZ Rosette Original data GEO bulk
115 GST NPP1 4 h (leaf) 0.80 >More info 0.59 >More info Mock 4 h (leaf) Original data Elicitor treatments
116 Pto inoculated 0.79 >More info 0.60 >More info col Original data GEO bulk
117 Col-0 48 hpi 0.71 >More info 0.68 >More info Col-0 uninoculated Original data GEO bulk
118 apk1 apk2 0.76 >More info 0.63 >More info Col0-control whole rosette Original data GEO bulk
119 Cor hrpS 10h 0.86 >More info 0.53 >More info Mock 10h Cor hrpS Original data GEO bulk
120 gun1gun5 far-red pretreated -0.79 >More info -0.60 >More info WT far-red pretreated Original data GEO bulk
121 Blue Light 4 h 0.78 >More info 0.61 >More info White Light 4 h Original data Light treatments
122 bZIP1ko mutant N+Light- 0.63 >More info 0.76 >More info WT-sib N+Light- whole plant Original data GEO bulk
123 coi1-16 ein2 sid2 ctrl -0.84 >More info -0.55 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
124 treated group 0.70 >More info 0.69 >More info Control group Original data
125 WT H2O2 3h 0.85 >More info 0.53 >More info WT water 3h 3h_H2O2 Original data GEO bulk
126 5-Triiodobenzoic acid3 h 0.85 >More info 0.53 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
127 pmr4-1 control 0.72 >More info 0.66 >More info WT control uninoculated Original data GEO bulk
128 col-5 DC3000 12h 0.77 >More info 0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
129 E.coli 0157 H7 7h 0.75 >More info 0.62 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
130 bak1-3 +Pep2 10h 0.85 >More info 0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
131 Col-O high light 0.73 >More info 0.64 >More info Col-O bule light Original data GEO bulk
132 Col-0 ozone 0.87 >More info 0.50 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
133 low water potential 0.79 >More info 0.58 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
134 Col whole leaf amplified 5 dpi 0.68 >More info 0.69 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
135 Phytoprostane A1 4 h 0.81 >More info 0.55 >More info Col-0 Original data GEO bulk
136 Col-0 flu HL 3h 0.80 >More info 0.56 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
137 wrky33 Bc inoculation 14h 0.85 >More info 0.51 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
138 Seedling KUA1-IOX est 0.76 >More info 0.60 >More info Seedling KUA1-IOX mock Original data
139 eds16 whole leaf 7d UI -0.61 >More info -0.75 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
140 M6PR transgenic leaf 100mM NaCl -0.59 >More info -0.77 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
141 IRP1-OE-Fe--shoot 0.76 >More info 0.60 >More info COL-0-Fe--shoot shoot Original data
142 WT flg22 2h 0.74 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
143 ASL9-ox -0.84 >More info -0.52 >More info WT aerial parts of seedlings Original data GEO bulk
144 Tsu -Fe 48h Shoots 0.74 >More info 0.62 >More info Tsu +Fe 24h Shoots Original data GEO bulk
145 WT 2-4h Xanthomonas 0.80 >More info 0.55 >More info WT T0 Original data GEO bulk
146 shoots bhlh100/101 0uM Fe 0.86 >More info 0.49 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
147 ice1 6H Cold 0.83 >More info 0.52 >More info WT 6H Cold Original data GEO bulk
148 camta1/3 warm 0.66 >More info 0.69 >More info WT warm entire aerial part Original data GEO bulk
149 smg5-2 0.81 >More info 0.54 >More info WT whole plant Original data GEO bulk
150 rpoTmp(line) MLD stressed 0.77 >More info 0.58 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
151 upf3 0.79 >More info 0.56 >More info WT whole plant Original data GEO bulk
152 ABA DFPM 0.82 >More info 0.53 >More info control Original data GEO bulk
153 R. solani AG8 0.79 >More info 0.56 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
154 oligomycin 4 h 0.81 >More info 0.53 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
155 sni1 0.79 >More info 0.55 >More info WT Original data GEO bulk
156 Phaseolicola 2 h (leaf) 0.72 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
157 Fenclorim 24hr 0.83 >More info 0.51 >More info Acetone 24hr root Original data GEO bulk
158 WT Bc inoculation 14h 0.82 >More info 0.52 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
159 dor drought 0.73 >More info 0.61 >More info WT drought Original data GEO bulk
160 Col-0 DCA 48h 0.73 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
161 ice1 3H Cold 0.81 >More info 0.52 >More info WT 3H Cold Original data GEO bulk
162 smg7b-1 0.72 >More info 0.61 >More info WT whole plant Original data GEO bulk
163 csn5 (csn5a-2 csn5b) light 0.81 >More info 0.52 >More info WT light Original data GEO bulk
164 Col-Luc WT 3h antimycin A 0.78 >More info 0.55 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
165 Col BTH 0.65 >More info 0.67 >More info Col rosettes Original data GEO bulk
166 essp4/sdg8-5 mutant 0.78 >More info 0.54 >More info wild type leaf Original data GEO bulk
167 dde2-2 9 hpi A. brassicicola 0.82 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
168 mil4 BTH 0.69 >More info 0.63 >More info Col BTH rosettes Original data GEO bulk
169 C24 ozone 0.85 >More info 0.47 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
170 plant (tga2-5-6) 4h phytoprostane A1 0.83 >More info 0.49 >More info plant (tga2-5-6) 4h control Original data GEO bulk
171 rosette Dark Wounded 0.73 >More info 0.58 >More info rosette Dark Control Original data GEO bulk
172 CT101 ozone 0.83 >More info 0.48 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
173 AvrRpm1 2 h (leaf) 0.72 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
174 camta2/3 warm 0.72 >More info 0.59 >More info WT warm entire aerial part Original data GEO bulk
175 SA 0.82 >More info 0.49 >More info WT mock Whole seedling Original data GEO bulk
176 Light 3day wt -0.77 >More info -0.54 >More info 0h wt Original data
177 WT AntimycinA 3h 0.80 >More info 0.51 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
178 Leafminer damaged seedlings 0.74 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
179 Leaf GLU1-KO 0.78 >More info 0.52 >More info Leaf Col(0) rosette leaves Original data GEO bulk
180 camta1/2/3 24h cold 0.68 >More info 0.62 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
181 WT 3h -P 0.78 >More info 0.52 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
182 Laer Flg22 2h 0.78 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
183 Chitosan 3h Treatment 0.75 >More info 0.55 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
184 sfr3 cold 0.73 >More info 0.57 >More info WT cold All aerial tissue Original data GEO bulk
185 sid2-1 cold -0.72 >More info -0.58 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
186 upf1 0.78 >More info 0.51 >More info WT whole plant Original data GEO bulk
187 pepr1-1 Pepr2-3 +Pep2 10h -0.78 >More info -0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
188 root Dosed gold 0.76 >More info 0.53 >More info root No gold .125 mM gold 24 h roots Original data
189 pnp1-1 1wk +P 0.79 >More info 0.50 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
190 pepr1-1 Pepr2-3 +Pep2 2h -0.77 >More info -0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
191 ERF96OE 0.68 >More info 0.61 >More info WT leaf Original data
192 safener treated 0.86 >More info 0.43 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
193 phr1 phl1 Root-Pi 0.75 >More info 0.54 >More info WT Shoot+Pi roots Original data GEO bulk
194 0.125 mM gold 24 h 0.76 >More info 0.53 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
195 sid2-2 9 hpi A. brassicicola 0.83 >More info 0.46 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
196 brm-101 0.73 >More info 0.55 >More info Ler Original data GEO bulk
197 S14-150 0.67 >More info 0.61 >More info wt Original data GEO bulk
198 anac017-1 H2O2 3h -0.79 >More info -0.49 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
199 Salt Stress 24 h (shoot) 0.69 >More info 0.59 >More info Stress mock 24 h (shoot) Original data Stress treatments
200 Elevated CO2 fully expanded leaf 0.82 >More info 0.45 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
201 R. solani AG2-1 0.77 >More info 0.50 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
202 Laer Flg22+GA 2h 0.77 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
203 col-5 DC3000-avrRpm 4h 0.75 >More info 0.52 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
204 aox1a(line) MLD stressed 0.73 >More info 0.54 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
205 6h +Pi -0.77 >More info -0.50 >More info 6h -Pi root Original data GEO bulk
206 ARR22-ox (t-zeatin 3 h) 0.87 >More info 0.40 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
207 RRE2 Chitin 0.75 >More info 0.51 >More info Chitin Original data GEO bulk
208 8hr-pH4.5 0.72 >More info 0.54 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
209 atgsnor1-1 -0.66 >More info -0.60 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
210 rosettes WT drought 0.79 >More info 0.47 >More info rosettes WT watered Original data GEO bulk
211 Differentiation 12h 0.60 >More info 0.66 >More info Differentiation 0h leaves Original data
212 LTN008-2 aza-dc 0.80 >More info 0.46 >More info LTN012-2 Mock Original data
213 Flagellin 4 h (leaf) 0.74 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
214 seedling 1.5h after Gamma atm-1 0.72 >More info 0.54 >More info seedling day 1 unirradiated atm-1 1.5h Original data
215 sicy-192 gun1-101 cotyledons 0.70 >More info 0.56 >More info WT cotyledons cotyledons Original data
216 Laer pretreat GA Flg22 1h 0.54 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
217 Leafminer locally damaged thaliana seedlings 0.74 >More info 0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
218 pad4-PsmES4326-24hpi -0.71 >More info -0.54 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
219 WT 1wk -P 0.83 >More info 0.42 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
220 pho1 0.81 >More info 0.43 >More info Col2WT Original data GEO bulk
221 ulp1c ulp1d +Pto 0.70 >More info 0.54 >More info ulp1c ulp1d mock Original data GEO bulk
222 vtc1 (II) 0.71 >More info 0.53 >More info Col (II) rosette Original data GEO bulk
223 coi1-16 ein2 sid2 ozone 0.83 >More info 0.41 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
224 rcf1-1 cold 12h 0.69 >More info 0.55 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
225 Pst-DC3000(avrRpm1)-4hpi 0.76 >More info 0.47 >More info Pst-DC3000-4hpi Original data GEO bulk
226 Dex-rga(delta17) 2h GA4+DEX -0.75 >More info -0.48 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
227 nia1nia2noa1-2 0.74 >More info 0.49 >More info Col-0 whole seedlings Original data GEO bulk
228 ice1 24H Cold 0.68 >More info 0.54 >More info WT 24H Cold Original data GEO bulk
229 35S::ERF104 Flg22 4h 0.67 >More info 0.55 >More info 35S::ERF104 H2O 4h Original data GEO bulk
230 Laer Flg22 1h 0.73 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
231 sta1 0.70 >More info 0.52 >More info WT Original data GEO bulk
232 aox1a:rpoTmp untreated 0.75 >More info 0.47 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
233 Col whole leaf 5 dpi 0.59 >More info 0.63 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
234 Col-0 SA 0.74 >More info 0.48 >More info Col-0 Original data GEO bulk
235 +1.6 mM Tween 20 1 h. 0.59 >More info 0.63 >More info +distilled water 1 h. Original data GEO bulk
236 amiR-tor induced 6d 0.65 >More info 0.57 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
237 NJ15 0.58 >More info 0.63 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
238 hypoxic 0.68 >More info 0.53 >More info WT aerobic hypoxia Original data GEO bulk
239 Laer Flg22+GA 1h 0.72 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
240 edr1 36 h powdery mildew 0.70 >More info 0.51 >More info Col-0 36 h powdery mildew Original data GEO bulk
241 GST 4 h (leaf) 0.70 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
242 aerial organ callus inducing medium 96 h 0.67 >More info 0.54 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
243 rosettes drought 0.64 >More info 0.56 >More info rosettes watered Original data GEO bulk
244 Cocultivation 8 hrs root 0.80 >More info 0.40 >More info Mock cocultivation 8 hrs root Root Original data
245 camta3-2 0.62 >More info 0.58 >More info WT Original data GEO bulk
246 ARR22-ox 0.72 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
247 aerial organ callus inducing medium 48 h 0.71 >More info 0.49 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
248 Lipopolysaccaride4 h (leaf) 0.76 >More info 0.44 >More info Mock 4 h (leaf) Original data Elicitor treatments
249 erf104-ko Flg22 4h 0.52 >More info 0.67 >More info erf104-ko H2O 4h Original data GEO bulk
250 cell culture 4 h phytoprostane A1 0.66 >More info 0.53 >More info cell culture 4 h control Original data GEO bulk
251 hrpA fliC 7h 0.80 >More info 0.38 >More info Mock 7h hrpA fliC Original data GEO bulk
252 35S-MIF1 light grown 0.67 >More info 0.51 >More info Light-grown WT control Original data GEO bulk
253 Whole root - low pH 12H 0.68 >More info 0.50 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
254 cat2-hCO2 -0.74 >More info -0.44 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
255 DC3000 7h 0.59 >More info 0.58 >More info Mock 7h DC3000 Original data GEO bulk
256 coi1-2 0.71 >More info 0.46 >More info Col-0 mock Whole seedling Original data GEO bulk
257 Mutant cry1 (High Light) -0.70 >More info -0.47 >More info Col-0 (High Light) Original data GEO bulk
258 20d after anthesis 0.71 >More info 0.46 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
259 abh1 -ABA 0.67 >More info 0.50 >More info Col-0 -ABA Original data GEO bulk
260 D2O 0.74 >More info 0.43 >More info H2O seedling Original data GEO bulk
261 TNT-seedlings 0.80 >More info 0.37 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
262 Col-0 drought 0.66 >More info 0.51 >More info Col-0 control Original data GEO bulk
263 cry1 high light -0.70 >More info -0.47 >More info Col-O high light Original data GEO bulk
264 Col whole leaf 3dpi 0.65 >More info 0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
265 vtc2 (I) 0.65 >More info 0.51 >More info Col (I) rosette Original data GEO bulk
266 bio4-1 mutant leaves 0.56 >More info 0.60 >More info WT leaves leaves Original data GEO bulk
267 des1 water 0.67 >More info 0.49 >More info WT water water leaf Original data GEO bulk
268 long 14-degree- 0.63 >More info 0.53 >More info control long Original data GEO bulk
269 cs26 long day 0.65 >More info 0.51 >More info Leaves-WT-LD leaf Original data GEO bulk
270 Hydrogen Peroxide 500 uM 0.67 >More info 0.49 >More info Control RB and PER Hydrogen Peroxide Original data
271 FarRed Light 45min -0.40 >More info -0.76 >More info White Light 45min Original data Light treatments
272 Dex-rga(delta17) 4h GA4+DEX -0.72 >More info -0.44 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
273 inhibitor A Treated 0.73 >More info 0.43 >More info Negative Control Original data GEO bulk
274 WT NAA 2h -0.47 >More info -0.69 >More info WT 0h Leaf tissue Original data GEO bulk
275 WT+H2O2 0.66 >More info 0.49 >More info WT H2O2 Original data GEO bulk
276 rosettes myoox drought 0.77 >More info 0.38 >More info rosettes myoox watered Original data GEO bulk
277 long 12-degree- 0.53 >More info 0.62 >More info control long Original data GEO bulk
278 JA 0.63 >More info 0.52 >More info Col-0 mock Whole seedling Original data GEO bulk
279 WT flg22 1h 0.64 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
280 35S:VND7-VP16-GR+CHX 0.59 >More info 0.56 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
281 cop1 Seedling BL 0.78 >More info 0.37 >More info WT Seedling BL Original data GEO bulk
282 Col laser microdissected 5 dpi 0.56 >More info 0.59 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
283 P.p 30hai 0.64 >More info 0.51 >More info At-Control roots Original data GEO bulk
284 Col-0 C2H4 24h 0.75 >More info 0.40 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
285 Time-0 chr11-1chr17-1 -0.63 >More info -0.51 >More info Time-0 Col-0 leaf explants Original data
286 WT roots - Fe 0.77 >More info 0.37 >More info WT roots + Fe Roots Original data GEO bulk
287 mpk6-ko Flg22 4h 0.60 >More info 0.54 >More info mpk6-ko H2O 4h Original data GEO bulk
288 WT-drought 0.73 >More info 0.41 >More info WT-control leaf Original data
289 8h-DC3000 avrRpm1 0.73 >More info 0.41 >More info 8h-DC3000 leaves Original data GEO bulk
290 csn3-1 light 0.70 >More info 0.43 >More info WT light Original data GEO bulk
291 WT +elf18 10h 0.65 >More info 0.48 >More info WT untreated elf18 Original data GEO bulk
292 col-5 hrpA 2h 0.66 >More info 0.47 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
293 abi4 vtc2 (I) 0.63 >More info 0.50 >More info Col (I) rosette Original data GEO bulk
294 Heat shock optimum 0.48 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
295 miR393 flg22 2h 0.57 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
296 rao2 H2O2 3h -0.63 >More info -0.49 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
297 root epidermis and lateral root cap pH4.6 0.62 >More info 0.50 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
298 edr1 0 h powdery mildew 0.65 >More info 0.46 >More info Col-0 0 h powdery mildew Original data GEO bulk
299 Tsu -Fe 24h Shoots 0.67 >More info 0.44 >More info Tsu +Fe 24h Shoots Original data GEO bulk
300 plant (Col-0) 4h phytoprostane A1 0.67 >More info 0.44 >More info plant (tga2-5-6) 4h control Original data GEO bulk
301 cngc1-3 0.63 >More info 0.48 >More info Col-0 root Original data GEO bulk
302 sdg2 0.74 >More info 0.37 >More info wt seedling Original data GEO bulk
303 cdpk6-yfp 0.70 >More info 0.41 >More info Kan seedlings Original data GEO bulk
304 arf2 mock 0.63 >More info 0.47 >More info Col mock Original data GEO bulk
305 apum23 0.68 >More info 0.42 >More info WT (Col-3) aerial parts Original data GEO bulk
306 CHS-silenced type -0.84 >More info -0.26 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
307 aox1a(line) untreated -0.71 >More info -0.39 >More info WT(Col0) untreated (control aox1a) leaf Original data
308 Mutant arf2 (etiol) 0.63 >More info 0.47 >More info Col (etiol) Original data GEO bulk
309 toc1-1-57hr 0.65 >More info 0.45 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
310 pmr4-1 powdery mildew 0.39 >More info 0.71 >More info WT powdery mildew uninoculated Original data GEO bulk
311 WT 1mM phosphate 8 hours. -0.69 >More info -0.41 >More info WT control (not supplemented). Original data
312 Whole root - low pH 24H 0.63 >More info 0.46 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
313 del1-1 5dpi 0.76 >More info 0.33 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
314 seedlings protease IV 0.54 >More info 0.55 >More info seedlings nontreated control whole seedling Original data
315 6-trichlorophenoxyacetic acid 3 h 0.63 >More info 0.46 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
316 det2 light-dark -0.75 >More info -0.34 >More info det2 light light-dark Original data GEO bulk
317 gai Control 0.76 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
318 Compost 0.65 >More info 0.44 >More info Perlite Compost Original data GEO bulk
319 sdg8-2 mutant 0.63 >More info 0.46 >More info wild type leaf Original data GEO bulk
320 Norflurazon 0.52 >More info 0.57 >More info Col-0 Original data GEO bulk
321 (Ws-2)+100 uM As 0.73 >More info 0.36 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
322 Ba1 UV 0.62 >More info 0.47 >More info Ba1 mock UV seedling Original data
323 bio4-1 mutant watered00µM biotin leaves -0.62 >More info -0.47 >More info bio4-1 mutant leaves leaves Original data GEO bulk
324 Norflurazon 0.52 >More info 0.57 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
325 wavy 0.54 >More info 0.54 >More info WT Original data GEO bulk
326 Nicotinamide-81hr 0.76 >More info 0.32 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
327 pnp1-1 1wk -P 0.76 >More info 0.32 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
328 siliques AtHb1 control 0.56 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
329 rosettes atx drought 0.54 >More info 0.54 >More info rosettes atx watered Original data GEO bulk
330 SPT4-R3 seedlings0 DAS 0.64 >More info 0.44 >More info Col-0 seedlings0 DAS seedlings Original data
331 rcf1-1 cold 0h 0.63 >More info 0.45 >More info WT cold 0h Control seedlings Original data GEO bulk
332 P.p 6hai 0.62 >More info 0.45 >More info At-Control roots Original data GEO bulk
333 cov1 cov2 stem Base 0.68 >More info 0.39 >More info WT stem Base stem Base Original data GEO bulk
334 cdkf:1-2 0.65 >More info 0.42 >More info wt seedling young seedlings Original data GEO bulk
335 msh1 recA3 heat shock 0.65 >More info 0.42 >More info WT heat shock above-ground parts Original data GEO bulk
336 leaf13 0.52 >More info 0.55 >More info unwounded leaves none Original data GEO bulk
337 Dark 40min pls UV-AB 5min 0.67 >More info 0.40 >More info Dark 45 min Original data Light treatments
338 Nicotinamide-57hr 0.75 >More info 0.32 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
339 aerial organ callus inducing medium 24h 0.69 >More info 0.38 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
340 Col-0 SA 0.59 >More info 0.47 >More info Col-0 water complete seedling Original data
341 cop1 Seedling Dark -0.58 >More info -0.48 >More info WT Seedling Dark Original data GEO bulk
342 toc1-1-49hr 0.67 >More info 0.39 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
343 miR393 flg22 1h 0.57 >More info 0.49 >More info WT 0h Leaf tissue Original data GEO bulk
344 ataf1-1 mutant Col-0 Un-inoculated -0.75 >More info -0.31 >More info WT Col-0 Un-inoculated Original data GEO bulk
345 Nicotinamide-53hr 0.76 >More info 0.30 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
346 FarRed Light 4 h 0.55 >More info 0.51 >More info White Light 4 h Original data Light treatments
347 penta MeJA 1h 0.61 >More info 0.45 >More info Laer MeJA 1h leaf discs Original data GEO bulk
348 total mRNA eif3k 0.68 >More info 0.38 >More info total mRNA WT aerial part Original data GEO bulk
349 C2 leaf-drought 0.64 >More info 0.42 >More info C2 leaf-well watered Original data GEO bulk
350 miR 0h 0.56 >More info 0.50 >More info Col 0h Leaf Original data GEO bulk
351 cop1 Seedling BL+ABA 0.63 >More info 0.43 >More info WT Seedling BL+ABA Original data GEO bulk
352 ced1 -0.61 >More info -0.45 >More info WT PEG 6hr seedlings Original data GEO bulk
353 P.p 10.5hai 0.56 >More info 0.49 >More info At-Control roots Original data GEO bulk
354 24h +Pi -0.74 >More info -0.31 >More info 24h -Pi root Original data GEO bulk
355 Dark 3day ivd 0.71 >More info 0.34 >More info 0h ivd Original data
356 A. thaliana-A. lyrata hybrid -0.61 >More info -0.44 >More info A. thaliana mature leaves before flowering Original data GEO bulk
357 miR393 0h -0.52 >More info -0.53 >More info WT 0h Leaf tissue Original data GEO bulk
358 ARR21C-ox 0.75 >More info 0.30 >More info Col-0 Original data ARR21C overexpression
359 long 17-degree- 0.42 >More info 0.63 >More info control long Original data GEO bulk
360 oas-a1.1 Cd 18h 0.48 >More info 0.57 >More info Cd 18h root Root Original data GEO bulk
361 chito-octamer 0.58 >More info 0.46 >More info Col Mock Original data GEO bulk
362 FOX line K16331 0.57 >More info 0.47 >More info empty vector control (T3) FOX lines Original data GEO bulk
363 AFB1 flg22 2h 0.59 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
364 rosette Light Wounded 0.53 >More info 0.51 >More info rosette Light Control Original data GEO bulk
365 A6 mutant 0.50 >More info 0.53 >More info WT rosette leaves Rosette leaves Original data GEO bulk
366 WT seedlings MV 0.70 >More info 0.33 >More info WT seedlings control Seedlings Original data GEO bulk
367 mkk2 24h BTH rep 0.53 >More info 0.50 >More info Col-0 24h BTH rep Original data GEO bulk
368 WT leaf-drought 0.61 >More info 0.42 >More info WT leaf-well watered Original data GEO bulk
369 toc1-1-65hr 0.69 >More info 0.34 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
370 HSP90 Reduced RNAi-A3 0.59 >More info 0.44 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
371 WT-Dry 0.55 >More info 0.48 >More info WT-CK dehydration treatment 1h Original data
372 35S::HRE2 Hypoxic -0.59 >More info -0.44 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
373 WT light -0.61 >More info -0.42 >More info WT dark Original data GEO bulk
374 amiR-tor induced 3d 0.53 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
375 root endodermis and quiescent center 40 mM NaCl 0.57 >More info 0.46 >More info root endodermis and quiescent center Original data GEO bulk
376 AFB1 flg22 1h 0.56 >More info 0.47 >More info WT 0h Leaf tissue Original data GEO bulk
377 IAA/inhibitor A Treated 0.60 >More info 0.42 >More info IAA Treated Original data GEO bulk
378 OE-HRA1 2HS  0.65 >More info 0.37 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
379 mbd6 mutant thaliana 10-day-old seedling 0.65 >More info 0.37 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
380 scrm-D 0.70 >More info 0.32 >More info Col-0 WT whole seedling Original data GEO bulk
381 Dark 40 min pls UV-A 5 min 0.66 >More info 0.36 >More info Dark 45 min Original data Light treatments
382 tmm1-inflorescence-tips 0.55 >More info 0.47 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
383 Col-0 V. longisporum-inoculated 48 hpi 0.54 >More info 0.48 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
384 GRX-overexpression seedlings control 0.73 >More info 0.29 >More info WT seedlings control Seedlings Original data GEO bulk
385 Col-0 mbs1-1 HL 0h 0.65 >More info 0.37 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
386 Mutant NahG(leaf) -0.64 >More info -0.38 >More info Col-0 (leaf) Original data GEO bulk
387 Whole root - S 3H 0.60 >More info 0.42 >More info Whole root - S 0H Original data GEO bulk
388 arf2 brz -0.55 >More info -0.47 >More info arf2 mock Original data GEO bulk
389 Mutant coi1(leaf) -0.48 >More info -0.54 >More info Col-0 (leaf) Original data GEO bulk
390 eds16 whole leaf 7dpi -0.48 >More info -0.54 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
391 Laer pretreat GA+JA Flg22 0h 0.67 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
392 WT +elf18 2h 0.50 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
393 ein2-PsmES4326-24hpi -0.67 >More info -0.34 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
394 35S-MIF1 dark grown 0.62 >More info 0.39 >More info Dark-grown WT control Original data GEO bulk
395 ppi2 0.63 >More info 0.38 >More info WT whole plant Original data GEO bulk
396 Mutant bri1 -0.61 >More info -0.40 >More info Ws-2 Original data Comparison of plant hormone related mutant
397 GSH 0.61 >More info 0.40 >More info control GSH treated seedlings Original data GEO bulk
398 WT+chitooctaose 0.55 >More info 0.46 >More info WT+water chitooctaose seedlings Original data GEO bulk
399 gpa1 -ABA GC -0.47 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
400 9 hr Hypoxia IP RNA 0.63 >More info 0.37 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
401 rcf1-1 cold 24h 0.62 >More info 0.38 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
402 plant (Col-0) 4h OPDA 0.60 >More info 0.40 >More info plant (Col-0) 4h control Original data GEO bulk
403 seedlings +5AC 0.63 >More info 0.37 >More info control seedlings 10-day old whole seedling Original data GEO bulk
404 P.p 2.5hai 0.55 >More info 0.45 >More info At-Control roots Original data GEO bulk
405 eds16 whole leaf 6hpi -0.50 >More info -0.50 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
406 plant (tga2-5-6) 4h OPDA 0.65 >More info 0.35 >More info plant (tga2-5-6) 4h control Original data GEO bulk
407 35S:LOB-GR mock 0.60 >More info 0.40 >More info Col mock mock seedling Original data GEO bulk
408 penta Pst DC3000 12hpi 0.77 >More info 0.23 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
409 clf-28 swn-7 0.62 >More info 0.38 >More info Col whole plant Original data GEO bulk
410 OPDA 4 h 0.60 >More info 0.40 >More info Col-0 Original data GEO bulk
411 WT +Pep2 2h 0.65 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
412 WT 30μM arsenate 8 hours. 0.71 >More info 0.29 >More info WT control (not supplemented). Original data
413 cngc19 0.65 >More info 0.35 >More info Col-0 root Original data GEO bulk
414 MIL4 ox BTH 0.53 >More info 0.47 >More info Col BTH Original data GEO bulk
415 OE WRKY40.4 high light 0.41 >More info 0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
416 wrky72-1-NOCO2 INFECTED 0.57 >More info 0.42 >More info WT-NOCO2 INFECTED Original data GEO bulk
417 GO5; 0h switch to ambient CO2 concentrations; -0.68 >More info -0.31 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
418 overexpresser LBD38 in -N -0.64 >More info -0.35 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
419 Stem tissue 5 days NAA 0.60 >More info 0.39 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
420 Col-0 INA 6d 0.51 >More info 0.48 >More info Col-0 MOCK 6d Original data GEO bulk
421 root stele 40 mM NaCls 0.66 >More info 0.33 >More info root stele Original data GEO bulk
422 MPK6 ox Shoot Hypoxia 0.77 >More info 0.22 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
423 Wounding Stress3 h (shoot) 0.50 >More info 0.49 >More info Stress mock 3 h (shoot) Original data Stress treatments
424 T8 leaf-drought 0.48 >More info 0.51 >More info T8 leaf-well watered Original data GEO bulk
425 1h light (+Lincomycin) 0.49 >More info 0.50 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
426 irradiated leaf (WT 1d) 0.72 >More info 0.26 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
427 WT Seedling BL -0.53 >More info -0.45 >More info WT Seedling Dark Original data GEO bulk
428 CAX1/CAX3 mutant 0.50 >More info 0.48 >More info Col whole plant Original data GEO bulk
429 BLM+INA 0.60 >More info 0.38 >More info CK BLM and INA seedling Original data
430 WT resupplied Pi 4h 0.67 >More info 0.31 >More info WT complete seedlings Original data
431 Tsu -Fe 24h Roots 0.57 >More info 0.41 >More info Tsu +Fe 24h Roots Original data GEO bulk
432 HSP90 Reduced RNAi-B1 0.64 >More info 0.34 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
433 Laer pretreat GA+JA Flg22 2h 0.63 >More info 0.35 >More info Laer pretreat water control leaf discs Original data GEO bulk
434 Stem wox4 -0.56 >More info -0.42 >More info Stem Col first internode of stem Original data GEO bulk
435 rdr6-15 -0.59 >More info -0.39 >More info Col-0 Original data GEO bulk
436 Tsu-1 -Fe 24h 0.57 >More info 0.41 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
437 toc1-1-81hr 0.56 >More info 0.42 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
438 short 12-degree- 0.46 >More info 0.52 >More info control short Original data GEO bulk
439 T6 leaf-drought 0.47 >More info 0.51 >More info T6 leaf-well watered Original data GEO bulk
440 JA 3h 0.37 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
441 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.80 >More info -0.17 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
442 35S:LOB-GR DEX 0.54 >More info 0.43 >More info Col DEX dexamethasone seedling Original data GEO bulk
443 chito-tetramer 0.58 >More info 0.39 >More info Col Mock Original data GEO bulk
444 Root -Cs 0.53 >More info 0.44 >More info Control-root Original data GEO bulk
445 Col-0 low oxygen 0.58 >More info 0.39 >More info Col-0 control low oxygen root Original data GEO bulk
446 Laer pretreat GA+JA Flg22 1h 0.65 >More info 0.32 >More info Laer pretreat water control leaf discs Original data GEO bulk
447 root columella root cap 40 mM NaCl 0.66 >More info 0.31 >More info root columella root cap Original data GEO bulk
448 whole roots -Fe 48 hour 0.60 >More info 0.37 >More info whole roots standard Original data GEO bulk
449 eds16 whole leaf 0h UI -0.32 >More info -0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
450 root stele pH4.6 0.44 >More info 0.53 >More info root stele pH5.7 Original data GEO bulk
451 35S::KLU 0.45 >More info 0.52 >More info WT Shoot Original data
452 Got7 UV 0.40 >More info 0.56 >More info Got7 mock UV seedling Original data
453 SCR-GR Time 12H Dex 0.65 >More info 0.31 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
454 eds16 whole leaf 3dpi -0.52 >More info -0.44 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
455 WT NAA/flg 1h 0.51 >More info 0.45 >More info WT 0h Leaf tissue Original data GEO bulk
456 gpa1-4/agb1-2 ozone 2d -0.58 >More info -0.38 >More info Col ozone 2d ozone Original data GEO bulk
457 8-DAC chr11-1chr17-1 0.71 >More info 0.25 >More info 8-DAC Col-0 leaf explants Original data
458 mutant acs6E (single mutant) 0.58 >More info 0.38 >More info col control (single mutant) Original data GEO bulk
459 root longitudinal zone-3 NaCl 0.64 >More info 0.32 >More info root longitudinal zone-3 Original data GEO bulk
460 expressing C2 MeJA -0.55 >More info -0.41 >More info LUC2T Original data GEO bulk
461 atmyc2 cop1 Seedling BL 0.64 >More info 0.32 >More info WT Seedling BL Original data GEO bulk
462 sicy-192 cotyledons 0.41 >More info 0.55 >More info WT cotyledons cotyledons Original data
463 Red/FR Light 4 h -0.54 >More info -0.41 >More info FarRed Light 4 h Original data Light treatments
464 root cells endodermis 140mM NaCl 3 hours 0.63 >More info 0.32 >More info root cells endodermis standard 1 hour root cells endodermis Original data
465 ex1 flu dark 8hours/30 minute light -0.63 >More info -0.32 >More info col dark 8hours/30 minute light Original data GEO bulk
466 tor mutant 0.65 >More info 0.30 >More info WT (Col) none seedlings Original data GEO bulk
467 root cells cortex 140mM NaCl 20 hours 0.58 >More info 0.37 >More info root cells cortex standard 1 hour root cells cortex Original data
468 WT no Pi 0.64 >More info 0.31 >More info WT complete seedlings Original data
469 Uniconazole 3 h 0.59 >More info 0.36 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
470 aerial organ callus inducing medium 12 h 0.56 >More info 0.38 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
471 Mutant nph4-1_arf19-1 0.55 >More info 0.39 >More info Col Original data GEO bulk
472 TiO2 germinant -0.58 >More info -0.36 >More info Millipore Water germinant TiO2 seedling Original data
473 irradiated leaf (cmt 1d) 0.60 >More info 0.34 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
474 WT cold 0.57 >More info 0.37 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
475 10min Reillumination IP RNA -0.51 >More info -0.43 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
476 pnp1-1 3h -P 0.52 >More info 0.42 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
477 Paclobutrazol 3 h 0.61 >More info 0.33 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
478 tor mutant glucose 0.62 >More info 0.32 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
479 CeO2 germinant -0.43 >More info -0.51 >More info Millipore Water germinant CeO2 seedling Original data
480 tbf1-SA -0.65 >More info -0.28 >More info WT-SA 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
481 KAN1-GR 60min 0.55 >More info 0.38 >More info KAN1-GR 0min Original data GEO bulk
482 penta Control 0.76 >More info 0.17 >More info Laer Control leaf discs Original data GEO bulk
483 albino Ds13-2198-1 -0.80 >More info -0.13 >More info control Original data GEO bulk
484 Col-0 low oxygen 0.56 >More info 0.37 >More info Col-0 Original data GEO bulk
485 whole roots -Fe 72 hour 0.60 >More info 0.33 >More info whole roots standard Original data GEO bulk
486 Fe starvation 72 h 0.60 >More info 0.33 >More info Control Original data GEO bulk
487 Elevated CO2 expanding leaf 0.57 >More info 0.36 >More info Ambient CO2 expanding leaf expanding leaf Original data
488 WT 90-105 min Xanthomonas 0.52 >More info 0.41 >More info WT T0 Original data GEO bulk
489 OE WRKY63.3 high light 0.57 >More info 0.36 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
490 root longitudinal zone-4 low sulfur -0.69 >More info -0.24 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
491 atmospheric CO2 low Mg shoot 0.58 >More info 0.35 >More info atmospheric CO2 normal Mg shoot Shoot Original data
492 FAMA induced 48h 0.66 >More info 0.26 >More info control 48h Whole seedling Original data GEO bulk
493 Wounding Stress3 h (root) -0.53 >More info -0.39 >More info Stress mock 3 h (root) Original data Stress treatments
494 AsAKiin11 T1 0.52 >More info 0.40 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
495 rao1-2 3h antimycin A -0.68 >More info -0.24 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
496 Selenate (shoot) 0.61 >More info 0.31 >More info Ws (shoot) Original data GEO bulk
497 leaf rlt1-1rlt2-1 -0.51 >More info -0.41 >More info leaf Col-0 leaf Original data GEO bulk
498 root columella root cap pH4.6 0.58 >More info 0.34 >More info root columella root cap pH5.7 Original data GEO bulk
499 root cells cortex 140mM NaCl 8 hours 0.60 >More info 0.32 >More info root cells cortex standard 1 hour root cells cortex Original data
500 SA Treated 0.84 >More info 0.08 >More info Water Original data GEO bulk
501 myb3 myb3r4d 0.51 >More info 0.41 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
502 Shoot Selenate 0.61 >More info 0.31 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
503 ws 24h4c q8ws 0.67 >More info 0.24 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
504 arp6-10 24h at 27 ºC 0.63 >More info 0.28 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
505 low CO2 + light 0.64 >More info 0.27 >More info normal CO2 + light Original data GEO bulk
506 root protophloem 40 mM NaCl 0.51 >More info 0.40 >More info root protophloem Original data GEO bulk
507 Bay-0-1h IAA -0.51 >More info -0.40 >More info Bay-0-0h IAA whole plant Original data GEO bulk
508 ckh1 CK200 0.63 >More info 0.28 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
509 PNO8 3 h 0.75 >More info 0.16 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
510 9 hr Hypoxia 1 hr recovery IP RNA 0.59 >More info 0.32 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
511 dicamba 0.58 >More info 0.33 >More info WT mock whole seedling Original data GEO bulk
512 amiRAP hypoxic -0.33 >More info -0.58 >More info hypoxic hypoxia Original data GEO bulk
513 gh3.5D uninoculated -0.33 >More info -0.58 >More info Col-0 48 hpi Original data GEO bulk
514 pil5 red light 0.56 >More info 0.34 >More info Col-0 red light Original data GEO bulk
515 KCl germinant -0.54 >More info -0.36 >More info Millipore Water germinant KCl seedling Original data
516 root cortex pH4.6 0.52 >More info 0.38 >More info root cortex pH5.7 Original data GEO bulk
517 cat2-short-day 2d 0.52 >More info 0.38 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
518 anac017-2 H2O2 3h -0.62 >More info -0.28 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
519 Octopus overexpressor 35SDYG25 0.38 >More info 0.52 >More info WS Original data GEO bulk
520 MYB46-GR DEX 0.23 >More info 0.67 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
521 Laer pretreat GA Flg22 0h 0.61 >More info 0.29 >More info Laer pretreat water control leaf discs Original data GEO bulk
522 rosette leaves fdh 0.58 >More info 0.32 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
523 embryo paclobutrazol 0.61 >More info 0.29 >More info embryo-control paclobutrazol embryo Original data GEO bulk
524 L2.5 mutant -0.64 >More info -0.25 >More info Wt Original data GEO bulk
525 whole roots 140 mM NaCl 1 hour 0.54 >More info 0.35 >More info whole roots standard Original data GEO bulk
526 shoot control pSultr2:2 -0.62 >More info -0.27 >More info shoot control total Original data GEO bulk
527 root BA 12h 0.64 >More info 0.25 >More info root control 12h boron (5mM) root Original data GEO bulk
528 ein5-1 ski2-3 0.54 >More info 0.35 >More info Col-0 aerial tissue Original data
529 WT mitomycin C 0.54 >More info 0.35 >More info WT mock shoot apical meristem Original data
530 seedling 24h after Gamma WT 0.50 >More info 0.39 >More info seedling day 2 unirradiated WT 24h Original data
531 gpa1 +ABA GC -0.38 >More info -0.51 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
532 stn7-1 -0.57 >More info -0.32 >More info Col-0 rosette leaves Original data GEO bulk
533 Nicotinamide-93hr 0.70 >More info 0.19 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
534 IRP1-OE-Ctrl--root 0.58 >More info 0.31 >More info COL-0-Ctrl--root root Original data
535 root cells stele 140mM NaCl 3 hours 0.58 >More info 0.31 >More info root cells stele standard 1 hour root cells stele Original data
536 Mutant nph4-1 0.54 >More info 0.34 >More info Col Original data GEO bulk
537 Mutant sav3-2 (SH) 0.34 >More info 0.54 >More info Col-0 (SH) Original data GEO bulk
538 ABA control 0.33 >More info 0.55 >More info No ABA control Original data GEO bulk
539 sav3-2 shade 0.34 >More info 0.54 >More info Col-0 shade seedlings Original data GEO bulk
540 sps1 -0.64 >More info -0.24 >More info WT seedling Original data GEO bulk
541 WT chitooctaose 0.50 >More info 0.38 >More info WT water Original data GEO bulk
542 Cambium 5 days NAA 0.52 >More info 0.36 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
543 Uniconazole 12 h 0.64 >More info 0.24 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
544 Dry pre-dawn 0.27 >More info 0.61 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
545 Col-0 Flg22 4h 0.59 >More info 0.29 >More info Col-0 H2O 4h Original data GEO bulk
546 root cells cortex 140mM NaCl 3 hours 0.58 >More info 0.30 >More info root cells cortex standard 1 hour root cells cortex Original data
547 Mutant arf19-1 0.58 >More info 0.30 >More info Col Original data GEO bulk
548 ani1 T16 -0.59 >More info -0.29 >More info WT T16 root tissue Original data GEO bulk
549 gpa1-4/agb1-2 clean-air 2d 0.59 >More info 0.29 >More info Col clean-air 2d clean-air Original data GEO bulk
550 gul2-1 mutant 0.59 >More info 0.29 >More info WT 7 day-old whole seedlings Original data
551 psae1-3 -0.31 >More info -0.57 >More info WS rosette leaves Original data GEO bulk
552 hst5 0.54 >More info 0.33 >More info Col-0 Original data GEO bulk
553 red illumination +lincomycin 0.33 >More info 0.54 >More info red illumination -lincomycin Original data GEO bulk
554 gun1-9 norflurazon 0.62 >More info 0.25 >More info gun1-9 control Original data GEO bulk
555 shoots WT 0uM Fe 0.82 >More info 0.05 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
556 Mutant cry1 -0.64 >More info -0.23 >More info Col-0 Original data GEO bulk
557 Col-0 24hpi A. brassicicola 0.85 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
558 cry1 low light -0.64 >More info -0.23 >More info Col-O low light Original data GEO bulk
559 Salt Stress 24 h (root) 0.65 >More info 0.22 >More info Stress mock 24 h (root) Original data Stress treatments
560 P-chlorophenoxy- isobutyric acid 3 h 0.36 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
561 35S:RPS4 rrs1-11 T0 0.24 >More info 0.63 >More info 35S:RPS4 T0 leaves Original data
562 9m.KNO3 0.52 >More info 0.34 >More info To. KNO3 14 day old Roots Original data GEO bulk
563 Prohexadione 12 h 0.54 >More info 0.32 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
564 petiole in D 0.52 >More info 0.34 >More info petiole in WL petioles Original data GEO bulk
565 RRE1 Chitin 0.58 >More info 0.28 >More info Chitin Original data GEO bulk
566 arr-BA-sample -0.69 >More info -0.17 >More info Wt-BA-sample seedling Original data
567 Laer pretreat JA Flg22 2h 0.61 >More info 0.25 >More info Laer pretreat water control leaf discs Original data GEO bulk
568 camta3-1 0.51 >More info 0.34 >More info WT Original data GEO bulk
569 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.51 >More info -0.34 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
570 Ibuprofen 3 h 0.53 >More info 0.32 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
571 COL-0-Fe--shoot 0.52 >More info 0.33 >More info COL-0-Ctrl--shoot shoot Original data
572 vte2 leaves 48h LT 0.54 >More info 0.31 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
573 long 10-degree- 0.32 >More info 0.53 >More info control long Original data GEO bulk
574 S82-2 0.30 >More info 0.55 >More info wt Original data GEO bulk
575 toc1-1-77hr 0.76 >More info 0.09 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
576 Col-0 WT HL 3h 0.51 >More info 0.33 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
577 Mutant ein2(leaf) -0.53 >More info -0.31 >More info Col-0 (leaf) Original data GEO bulk
578 col 24h4c set4 0.50 >More info 0.34 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
579 35S::LFY 0.51 >More info 0.33 >More info Landsberg erecta seedlings Original data GEO bulk
580 Propiconazole 3 h 0.55 >More info 0.29 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
581 4d red light grown hmr-5 seedlings 0.59 >More info 0.25 >More info 4d red light grown WT(Col-0) seedlings Original data
582 lug3 leaves -0.51 >More info -0.32 >More info WT-leaves matured rosette leaves Original data GEO bulk
583 Nicotinamide-49hr 0.65 >More info 0.18 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
584 (Col-0)+100 uM As 0.52 >More info 0.31 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
585 pip3 At2g19270 TDNA 6h-1 0.50 >More info 0.33 >More info Col-0 whole plant Original data GEO bulk
586 WT Shoot-Pi 0.65 >More info 0.18 >More info WT Shoot+Pi shoots Original data GEO bulk
587 msh1 recA3 untreated 0.31 >More info 0.52 >More info WT untreated above-ground parts Original data GEO bulk
588 eif3h 0.60 >More info 0.23 >More info WT Original data GEO bulk
589 Shoot -P -0.64 >More info -0.18 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
590 9 hr Hypoxia 1 hr recovery Total RNA 0.55 >More info 0.27 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
591 35:SUB1A 0.56 >More info 0.26 >More info WT whole seedling Original data GEO bulk
592 Cd 24h root -0.50 >More info -0.32 >More info WT-Untreated Shoot Original data GEO bulk
593 sav1-1 shade 0.63 >More info 0.19 >More info Col-0 shade seedlings Original data GEO bulk
594 gtl1 0.52 >More info 0.30 >More info WT trichome Original data GEO bulk
595 gtl1-1 0.52 >More info 0.30 >More info WT trichome Original data GEO bulk
596 C24 UV1 -0.64 >More info -0.18 >More info C24 mock UV seedling Original data
597 21h-DC3000 avrRpm1 -0.74 >More info -0.08 >More info 21h-DC3000 leaves Original data GEO bulk
598 rao1-2 0.59 >More info 0.23 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
599 Whole root - low pH 6H 0.53 >More info 0.28 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
600 mbd4 mutant thaliana 10-day-old seedling 0.66 >More info 0.15 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
601 Col-0-3h IAA 0.51 >More info 0.30 >More info Col-0-0h IAA whole plant Original data GEO bulk
602 vte2-1 1d vernalization 0.54 >More info 0.27 >More info WT 1d vernalization Original data GEO bulk
603 WT Red light 1h 0.65 >More info 0.16 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
604 embryo ABA 0.53 >More info 0.28 >More info embryo-control ABA embryo Original data GEO bulk
605 csn4-1 dark 0.56 >More info 0.25 >More info WT light Original data GEO bulk
606 Nicotinamide-73hr 0.61 >More info 0.20 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
607 ein3 eil1 0.60 >More info 0.21 >More info Col-0 mock Whole seedling Original data GEO bulk
608 Transgenic LEC2GR Seedling 1h Dex 0.54 >More info 0.26 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
609 Laer pretreat GA Flg22 2h 0.53 >More info 0.27 >More info Laer pretreat water control leaf discs Original data GEO bulk
610 S5 0.52 >More info 0.28 >More info WT Original data GEO bulk
611 Col-0 HS 0.51 >More info 0.29 >More info Col-0 control heat shocked seedling Original data GEO bulk
612 WT (Col-0) heat shock 0.51 >More info 0.29 >More info WT (Col-0) whole seedling Original data GEO bulk
613 WT 24H Cold 0.53 >More info 0.27 >More info WT control Original data GEO bulk
614 Nicotinamide-65hr 0.61 >More info 0.19 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
615 scrm-D:mute 0.58 >More info 0.22 >More info Col-0 WT whole seedling Original data GEO bulk
616 toc1-1-53hr 0.69 >More info 0.11 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
617 Brz220 3 h 0.52 >More info 0.27 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
618 SHR-GR Time 1H Dex 0.50 >More info 0.29 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
619 oas-a1.1 Cd 24h 0.63 >More info 0.16 >More info Cd 24h root Shoot Original data GEO bulk
620 Propiconazole 12 h 0.55 >More info 0.24 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
621 Col-0 35S:MBS1 HL 0h -0.53 >More info -0.26 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
622 inhibitor B Treated 0.56 >More info 0.23 >More info Negative Control Original data GEO bulk
623 Laer GA 1h 0.58 >More info 0.21 >More info Laer Control leaf discs Original data GEO bulk
624 Nicotinamide-61hr 0.60 >More info 0.18 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
625 Col upon hypoxia 6 hrs 0.58 >More info 0.20 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
626 HairpinZ 4 h (leaf) 0.81 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
627 sav1-1 light 0.62 >More info 0.16 >More info Col-0 light seedlings Original data GEO bulk
628 (Col-0)+200 uM As 0.51 >More info 0.27 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
629 WT +Pep2 10h 0.51 >More info 0.27 >More info WT untreated Pep2 Original data GEO bulk
630 tZ -0.52 >More info -0.26 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
631 Selenate (root) 0.55 >More info 0.22 >More info Ws (root) Original data GEO bulk
632 Root Selenate 0.55 >More info 0.22 >More info Root control 40 micromolar selenate Root Original data GEO bulk
633 vte2 leaves 120h LT 0.73 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
634 GST-overexpression seedlings control 0.78 >More info -0.01 >More info WT seedlings control Seedlings Original data
635 cov1 cov2 stem Top -0.53 >More info -0.24 >More info WT stem Top stem Top Original data GEO bulk
636 Red/FR Light45min 0.15 >More info 0.62 >More info FarRed Light 45min Original data Light treatments
637 ara1/2mut 0.22 >More info 0.55 >More info Col-3 Original data GEO bulk
638 12h-DC3000 avrRpm1 0.55 >More info 0.21 >More info 12h-DC3000 leaves Original data GEO bulk
639 DUO1 induced 6h -0.64 >More info -0.12 >More info 6hr-not-induced whole plant Original data GEO bulk
640 AsAKiin11 T2 0.59 >More info 0.17 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
641 Col-0 overexpressing At1g54160 control 0.66 >More info 0.10 >More info WT no treatement Original data GEO bulk
642 eto1-4 +370 -0.50 >More info -0.26 >More info eto1-4 whole seedling Original data GEO bulk
643 toc1-1-61hr 0.59 >More info 0.17 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
644 At1g54160 ox 0.66 >More info 0.10 >More info Col-0 Original data GEO bulk
645 scl3 0.59 >More info 0.17 >More info Col-0 whole root Original data GEO bulk
646 ubc13A -Fe -0.61 >More info -0.15 >More info Col -Fe root Original data GEO bulk
647 Mutant arf2-6 -0.51 >More info -0.24 >More info Col Original data GEO bulk
648 phr1 Root-Pi 0.55 >More info 0.20 >More info WT Root+Pi roots Original data GEO bulk
649 pvip1 pvip2 seedling 0.77 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
650 AAF-OX 0.65 >More info 0.10 >More info Col-0 Rosette leaf Original data GEO bulk
651 WT Shoot Hypoxia 0.52 >More info 0.23 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
652 Elevated CO2 LIMITING N NIGHT 0.52 >More info 0.22 >More info Elevated CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
653 Full C2 T1 0.51 >More info 0.23 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
654 auxin and brassinazole seedlings 0.55 >More info 0.19 >More info auxin seedlings Original data GEO bulk
655 ANAC102 knock-out low oxygen -0.56 >More info -0.18 >More info Col-0 low oxygen Original data GEO bulk
656 cngc4 0.55 >More info 0.19 >More info Ws-2 Seedlings Original data GEO bulk
657 AFB1 0h 0.68 >More info 0.05 >More info Col 0h Leaf Original data GEO bulk
658 QC pSCR(QC pSCRBRI1) 8h BL -0.53 >More info -0.20 >More info QC pSCR(QC pSCRBRI1) 0h BL brassinosteroid root Original data
659 Mh0 UV -0.69 >More info -0.03 >More info Mh0 mock UV seedling Original data
660 msh1 stunt 0.54 >More info 0.18 >More info WT Col-0 above ground part of plant Original data GEO bulk
661 eif3h polysome 0.52 >More info 0.20 >More info WT polysome Original data GEO bulk
662 toc1-1-93hr 0.50 >More info 0.22 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
663 Brassinolide 0.5 h (det2) 0.21 >More info 0.51 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
664 IAA 1h -0.54 >More info -0.17 >More info control 1h root Original data GEO bulk
665 Col PSTDC3000 24h 0.84 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
666 penta Flg22 1h 0.62 >More info 0.09 >More info Laer Flg22 1h leaf discs Original data GEO bulk
667 gun1-1 -lincomycin -0.50 >More info -0.21 >More info Col-0 -lincomycin Original data GEO bulk
668 P35S:rGRF3 0.51 >More info 0.20 >More info WS Original data GEO bulk
669 Laer pretreat JA Flg22 1h 0.54 >More info 0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
670 Nicotinamide-69hr 0.55 >More info 0.15 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
671 0h hml 0.76 >More info -0.06 >More info 0h wt Original data
672 Dark 4 h pls UV-AB 5min 0.58 >More info 0.12 >More info Dark 4 h Original data Light treatments
673 HSP90 Reduced Salk hsp90.1 -0.52 >More info -0.17 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
674 Nicotinamide-89hr 0.52 >More info 0.17 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
675 P. infestans 6 h (leaf) 0.84 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
676 ANAC102 knock-out -0.50 >More info -0.19 >More info Col-0 Original data GEO bulk
677 Ws seedlings 0.63 >More info 0.05 >More info ged1 seedlings Original data GEO bulk
678 abi3-6 16 DAF Seed -0.56 >More info -0.12 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
679 ged1 seedlings -0.63 >More info -0.05 >More info Ws seedlings Original data GEO bulk
680 G3P 0.80 >More info -0.12 >More info Mock distal leaves Original data GEO bulk
681 HSP90 Reduced RNAi-C1 0.50 >More info 0.18 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
682 seedling -S Exp 0.70 >More info -0.02 >More info seedling FN Exp seedling Original data
683 KO-nudx19 leaves 0.50 >More info 0.17 >More info WT leaves rosette leaves Original data
684 sng1 UV 0.68 >More info -0.01 >More info UV aerial region Original data GEO bulk
685 nhx5 0.54 >More info 0.13 >More info WT Rosette leaf Original data GEO bulk
686 naxillin 3h 0.50 >More info 0.17 >More info before treatment naxillin root Original data GEO bulk
687 atgsnor1-3-avrB-6h 0.55 >More info 0.12 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
688 HRE1-RNAi20 hypoxia 6 hrs 0.16 >More info 0.51 >More info Col upon hypoxia 6 hrs hypoxia seedling roots Original data GEO bulk
689 nhx6 0.57 >More info 0.10 >More info WT Rosette leaf Original data GEO bulk
690 ubp1c-1/35S:FLAG-UBP1C IP-RNA
2hHypoxia+20&9;Reoxy		 -0.51 >More info -0.15 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA
2hHypoxia+20&9;Reoxy		 2 h hypoxia +2' reoxy seedling Original data
691 35S:ATR1 like miR -0.50 >More info -0.16 >More info WT for miR Original data GEO bulk
692 nas4x roots - Fe -0.56 >More info -0.10 >More info WT roots - Fe Roots Original data GEO bulk
693 Mutant ap1-15(shoot apex) 0.50 >More info 0.16 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
694 Mutant sav3-2 (WL) 0.16 >More info 0.50 >More info Col-0 (WL) Original data GEO bulk
695 sav3-2 light 0.16 >More info 0.50 >More info Col-0 light seedlings Original data GEO bulk
696 gis5 seedlings 0.60 >More info 0.06 >More info WT seedlings Whole seedlings (leaves + roots) Original data
697 spx1 spx2 complete 0.59 >More info 0.07 >More info WT complete seedlings Original data
698 COL-0-Fe--root 0.58 >More info 0.08 >More info COL-0-Ctrl--root root Original data
699 Nicotinamide-85hr 0.51 >More info 0.14 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
700 bak1-3 untreated 0.64 >More info 0.01 >More info WT untreated untreated Original data GEO bulk
701 WT Seedling BL+ABA 0.53 >More info 0.11 >More info WT Seedling BL Original data GEO bulk
702 rpl24 polysome 0.51 >More info 0.13 >More info WT polysome seedling shoot/aerial seedling Original data
703 IAA 1 h -0.07 >More info -0.57 >More info Mock 1 h Original data Basic hormone treatment of seedlings
704 rao1-1 3h antimycin A -0.51 >More info -0.12 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
705 pollinated pop2-1 flowers -0.50 >More info -0.13 >More info pollinated WT flowers flowers Original data GEO bulk
706 glk1 glk2 GLK1-GR +DEX 24h -0.51 >More info -0.12 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
707 Ws-2 high light 0.11 >More info 0.52 >More info Ws-2 low light Original data GEO bulk
708 xyl-grown cell culture- 1h 1mM Fru -0.09 >More info -0.54 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
709 root longitudinal zone-3 low sulfur -0.50 >More info -0.12 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
710 rao2 AntimycinA 3h -0.50 >More info -0.12 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
711 Kin SA -0.54 >More info -0.08 >More info Col-0 SA Original data GEO bulk
712 Dark 6h hml -0.52 >More info -0.10 >More info 0h hml Original data
713 A. thaliana-A. halleri hybrid -0.52 >More info -0.10 >More info A. thaliana mature leaves before flowering Original data GEO bulk
714 sid2-1 warm -0.61 >More info -0.00 >More info WT warm entire aerial part Original data GEO bulk
715 SCR-GR Time 1H Dex 0.52 >More info 0.09 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
716 bZIP1ko mutant N+Light+ 0.56 >More info 0.03 >More info WT-sib N+Light+ whole plant Original data GEO bulk
717 sfr3 cold 0.52 >More info 0.07 >More info WT-cold aerial tissues Original data GEO bulk
718 dor control 0.55 >More info 0.04 >More info WT control Original data GEO bulk
719 Col-0 2h NAA 0.50 >More info 0.08 >More info Col-0 6h MOCK Original data GEO bulk
720 ein2 0.62 >More info -0.04 >More info Col-0 Leaves Original data GEO bulk
721 TaFLS overexpression line (OE1) -0.69 >More info 0.11 >More info Col-0 Rosette leaves Original data
722 Truncated AC2 T1 -0.52 >More info -0.05 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
723 ex1ex2flu dark 8hours/30 minute light -0.61 >More info 0.04 >More info col dark 8hours/30 minute light Original data GEO bulk
724 seedling 3h after Gamma WT 0.53 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
725 FLIGHT TAGESB plate 0.57 >More info -0.02 >More info GROUND CONTROL TAGESB plate Original data
726 Atwrky63 -0.68 >More info 0.14 >More info Col0 none leaf Original data GEO bulk
727 Mt -0.54 >More info -0.00 >More info Col-0 Original data GEO bulk
728 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
729 TaFLS overexpression line (OE2) -0.58 >More info 0.04 >More info Col-0 Rosette leaves Original data
730 rrd1 IBA -0.57 >More info 0.04 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
731 IAA7mII over-expressor IAA Treated -0.16 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
732 AtMYB30-ox 2-4h Xanthomonas 0.71 >More info -0.20 >More info WT 2-4h Xanthomonas Original data GEO bulk
733 bri1-116 -0.22 >More info 0.73 >More info Col seedling Original data GEO bulk
734 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
735 Lip0 UV 0.61 >More info -0.12 >More info Lip0 mock UV seedling Original data
736 35S:RPS4 rrs1-11 2h 0.52 >More info -0.05 >More info 35S:RPS4 2h leaves Original data
737 cat2-2; 0h switch to ambient CO2 concentrations; -0.52 >More info 0.06 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
738 erf5 erf6 +chitooctaose -0.50 >More info 0.04 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
739 E.orontii Infection 3 day -0.06 >More info 0.52 >More info Uninfection 3 day Original data Elicitor treatments
740 12h-DC3000 hrpA -0.52 >More info 0.09 >More info 12h-DC3000 leaves Original data GEO bulk
741 Truncated AC2 T2 -0.51 >More info 0.08 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
742 sid2-2 mock 0.51 >More info -0.14 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
743 Shoot apex inflorescence (after bolting) -0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
744 ABA 0.51 >More info -0.22 >More info control Original data GEO bulk
745 BAM7-Cat Ox untreated 0.53 >More info -0.27 >More info WT untreated none shoot Original data
746 Light 3day hml -0.81 >More info 0.57 >More info 0h hml Original data
747 coi1 0.56 >More info -0.42 >More info Col-0 Leaves Original data GEO bulk