4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on aerial organ callus inducing medium 24h
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List of experiments correlated with "aerial organ callus inducing medium 24h"  Help Download transcriptome of top 30
Score Experiment Correlation from
aerial organ callus inducing medium 24h		 Correlation to
aerial organ callus inducing medium 24h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 aerial organ callus inducing medium 24h 1.00 >More info 1.00 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
2 aerial organ callus inducing medium 48 h 0.92 >More info 0.90 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
3 aerial organ callus inducing medium 12 h 0.90 >More info 0.90 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
4 aerial organ callus inducing medium 96 h 0.88 >More info 0.84 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
5 IAA 3 h 0.74 >More info 0.73 >More info Mock 3 h Original data Basic hormone treatment of seedlings
6 WT Red light 18h -0.70 >More info -0.72 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
7 Chemically 0.65 >More info 0.73 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
8 Shoot submergence 24h 0.67 >More info 0.70 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
9 Col-0 9 hpi A. brassicicola 0.62 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
10 NAA -AA 0.69 >More info 0.67 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
11 cpr5npr1svi1 0.64 >More info 0.72 >More info WT(COL) Original data GEO bulk
12 col-5 hrpA 12h 0.64 >More info 0.72 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
13 Shoot dark control 7h 0.65 >More info 0.70 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
14 Light 4h steady-state -0.64 >More info -0.71 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
15 Col-0 C2H4 24h 0.66 >More info 0.68 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
16 rosette leaves fdh 0.57 >More info 0.77 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
17 C24-3h IAA 0.72 >More info 0.62 >More info C24-0h IAA whole plant Original data GEO bulk
18 D2O 0.65 >More info 0.68 >More info H2O seedling Original data GEO bulk
19 Light 4h polysome-bound -0.62 >More info -0.69 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
20 WT Seedling BL -0.62 >More info -0.69 >More info WT Seedling Dark Original data GEO bulk
21 Sulfometuron EC50 0.63 >More info 0.68 >More info Carrier Original data GEO bulk
22 edr1 36 h powdery mildew 0.63 >More info 0.67 >More info Col-0 36 h powdery mildew Original data GEO bulk
23 hrpA fliC 7h 0.55 >More info 0.73 >More info Mock 7h hrpA fliC Original data GEO bulk
24 phyB Dark -0.63 >More info -0.65 >More info WT(Ler) Dark Original data GEO bulk
25 phyAphyB Dark 0.63 >More info 0.65 >More info phyB Dark Original data GEO bulk
26 cpr5scv1 0.66 >More info 0.61 >More info WT(COL) Original data GEO bulk
27 E.coli 0157 H7 7h 0.53 >More info 0.74 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
28 ataf1-1 mutant Col-0 Bgh inoculated 0.62 >More info 0.65 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
29 cpr5npr1 0.62 >More info 0.64 >More info WT(COL) Original data GEO bulk
30 tt4 0.62 >More info 0.64 >More info Col-0 aerial part Original data
31 mil4 BTH 0.64 >More info 0.61 >More info Col BTH rosettes Original data GEO bulk
32 Shoot dark control 24h 0.58 >More info 0.66 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
33 Botrytis cinerea 48h 0.61 >More info 0.63 >More info control 48h Original data GEO bulk
34 Fei-0-3h IAA 0.65 >More info 0.59 >More info Fei-0-0h IAA whole plant Original data GEO bulk
35 mkk1/mkk2 24h BTH rep 0.61 >More info 0.63 >More info Col-0 24h BTH rep Original data GEO bulk
36 Osmotic Stress 24 h (shoot) 0.60 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
37 E.coli TUV86 2 fliC 7h 0.57 >More info 0.66 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
38 Col-0-3h IAA 0.68 >More info 0.54 >More info Col-0-0h IAA whole plant Original data GEO bulk
39 col-5 DC3000 12h 0.56 >More info 0.66 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
40 Leafminer locally damaged thaliana seedlings 0.63 >More info 0.59 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
41 Col0-PsmES4326-24hpi 0.61 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
42 MIL4 ox BTH 0.62 >More info 0.60 >More info Col BTH Original data GEO bulk
43 dde2-2 9 hpi A. brassicicola 0.53 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
44 Nicotinamide-69hr 0.53 >More info 0.68 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
45 Col-0 low oxygen 0.60 >More info 0.61 >More info Col-0 Original data GEO bulk
46 Cor hrpS 10h 0.58 >More info 0.63 >More info Mock 10h Cor hrpS Original data GEO bulk
47 HopZ1a treated 0.57 >More info 0.64 >More info col Original data GEO bulk
48 eif3h 0.64 >More info 0.56 >More info WT Original data GEO bulk
49 WT +elf18 10h 0.64 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
50 ceh1 mutant 0.61 >More info 0.59 >More info Parent line Original data
51 Dark 4 h pls RedLight 1min -0.50 >More info -0.69 >More info Dark 4 h Original data Light treatments
52 Leafminer damaged seedlings 0.63 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
53 GST NPP1 4 h (leaf) 0.58 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
54 petiole in FRD 0.62 >More info 0.57 >More info petiole in WL petioles Original data GEO bulk
55 Bur-0-3h IAA 0.68 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
56 Flagellin 4 h (leaf) 0.57 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
57 mpk6-ko Flg22 4h 0.54 >More info 0.65 >More info mpk6-ko H2O 4h Original data GEO bulk
58 Laer pretreat GA Flg22 1h 0.48 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
59 eto1-4 +393 -0.48 >More info -0.71 >More info eto1-4 whole seedling Original data GEO bulk
60 Laer treat paclobutrazol (PAC) 0.63 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
61 sfr2 control -0.52 >More info -0.66 >More info WT control All aerial tissue Original data GEO bulk
62 hrcC 0.58 >More info 0.60 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
63 edr1 18 h powdery mildew 0.57 >More info 0.61 >More info Col-0 18 h powdery mildew Original data GEO bulk
64 mkk2 24h BTH rep 0.56 >More info 0.61 >More info Col-0 24h BTH rep Original data GEO bulk
65 low R/FR JA spray 0.56 >More info 0.61 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
66 gh3.5-1D 48 hpi 0.61 >More info 0.56 >More info Col-0 uninoculated Original data GEO bulk
67 HopZ1a treated ulp1c ulp1d 0.53 >More info 0.64 >More info col Original data GEO bulk
68 WT light -0.56 >More info -0.61 >More info WT dark Original data GEO bulk
69 eif3h polysome 0.63 >More info 0.54 >More info WT polysome Original data GEO bulk
70 mkk1/mkk2 control rep 0.62 >More info 0.55 >More info Col-0 Time 0 rep Original data GEO bulk
71 Phaseolicola 2 h (leaf) 0.54 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
72 Differentiation 12h 0.56 >More info 0.60 >More info Differentiation 0h leaves Original data
73 Col whole leaf 7dpi 0.56 >More info 0.60 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
74 hrpA 7h 0.54 >More info 0.62 >More info Mock 7h hrpA Original data GEO bulk
75 Col whole leaf 5dpi 0.55 >More info 0.61 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
76 msh1 albino 0.57 >More info 0.59 >More info WT aerial part Original data GEO bulk
77 AVG 3 h -0.45 >More info -0.71 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
78 BI-1-3h IAA 0.63 >More info 0.52 >More info BI-1-0h IAA whole plant Original data GEO bulk
79 RPL18 TuMV inoculated total RNA 0.60 >More info 0.55 >More info mock inoculated total RNA PO Original data GEO bulk
80 Dark 6h ivd 0.57 >More info 0.58 >More info 0h ivd Original data
81 abi4 vtc2 (I) 0.59 >More info 0.56 >More info Col (I) rosette Original data GEO bulk
82 Red Light 4 h 0.49 >More info 0.66 >More info White Light 4 h Original data Light treatments
83 +1.6 mM Tween 20 1 h. 0.46 >More info 0.69 >More info +distilled water 1 h. Original data GEO bulk
84 Salt Stress 24 h (shoot) 0.56 >More info 0.58 >More info Stress mock 24 h (shoot) Original data Stress treatments
85 Col-0 +lincomycin 0.51 >More info 0.63 >More info Col-0 -lincomycin Original data GEO bulk
86 AvrRpt2 Col-0 6hpi 0.62 >More info 0.52 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
87 Dark 3day ivd 0.62 >More info 0.52 >More info 0h ivd Original data
88 pepr1-1 Pepr2-3 +Pep2 2h -0.55 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
89 Cold Stress 24 h (shoot) 0.53 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
90 rosette leaves lcr 0.50 >More info 0.64 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
91 eto1-4 0.48 >More info 0.66 >More info Col-0 whole seedling Original data GEO bulk
92 Primisulfuron EC50 0.52 >More info 0.61 >More info Carrier (primisulfuron) Original data GEO bulk
93 pnp1-1 3h +P 0.60 >More info 0.53 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
94 Elevated CO2 AMPLE N DAY 0.52 >More info 0.61 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
95 erf104-ko Flg22 4h 0.55 >More info 0.58 >More info erf104-ko H2O 4h Original data GEO bulk
96 efr-1 +elf18 10h -0.51 >More info -0.61 >More info WT +elf18 10h elf18 Original data GEO bulk
97 tumour 0.55 >More info 0.57 >More info non-tumor tumour Original data GEO bulk
98 pvip1 pvip2 0.50 >More info 0.62 >More info Col-0 whole rosettes Original data GEO bulk
99 35S::ERF104 Flg22 4h 0.51 >More info 0.61 >More info 35S::ERF104 H2O 4h Original data GEO bulk
100 flu over-tAPX 0.55 >More info 0.57 >More info WT Col Original data GEO bulk
101 WT Bc inoculation 14h 0.66 >More info 0.45 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
102 seedlings protease IV 0.55 >More info 0.56 >More info seedlings nontreated control whole seedling Original data
103 Elevated CO2 AMPLE N NIGHT 0.45 >More info 0.66 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
104 ice1 24H Cold 0.57 >More info 0.54 >More info WT 24H Cold Original data GEO bulk
105 Col-0 48 hpi 0.58 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
106 seedlings-week-old RECA1-overexpressing
transgenic		 0.53 >More info 0.58 >More info seedlings-week-old Col-0 seedlings Original data
107 Dark 2day wt 0.60 >More info 0.51 >More info 0h wt Original data
108 SA 4mM 0.48 >More info 0.63 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
109 sid2-2 9 hpi A. brassicicola 0.48 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
110 CMV-WT 0.50 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
111 toc1-1-77hr 0.57 >More info 0.53 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
112 Pto inoculated 0.50 >More info 0.60 >More info col Original data GEO bulk
113 WT cold 0.55 >More info 0.55 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
114 Dark 3day wt 0.56 >More info 0.54 >More info 0h wt Original data
115 vtc2 (I) 0.55 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
116 cpr5 0.57 >More info 0.53 >More info WT(COL) Original data GEO bulk
117 vte2-1 3d vernalization 0.55 >More info 0.55 >More info WT 3d vernalization Original data GEO bulk
118 MYB12OX/tt4 0.52 >More info 0.58 >More info Col-0 aerial part Original data
119 ASL9-ox -0.55 >More info -0.55 >More info WT aerial parts of seedlings Original data GEO bulk
120 B.cinerea 18 h infection 0.54 >More info 0.56 >More info Mock 18 h Original data Botrytis cinerea infection
121 Botrytis cinerea 18h 0.54 >More info 0.56 >More info control 18h Original data GEO bulk
122 Nicotinamide-73hr 0.50 >More info 0.60 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
123 gpa1 -ABA LF 0.48 >More info 0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
124 35S::PI ap3-3 35S::AP-GR +DEX 0.45 >More info 0.65 >More info 0hr DEX Original data GEO bulk
125 ein2-1 9 hpi A. brassicicola 0.48 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
126 cat2-2; 8h switch to ambient CO2 concentrations; 0.31 >More info 0.79 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
127 Col-0 under 4 days salt 0.54 >More info 0.55 >More info Col-0 under control 4 days salt treatment rosette Original data
128 ice1 6H Cold 0.56 >More info 0.53 >More info WT 6H Cold Original data GEO bulk
129 Dark 3day hml 0.56 >More info 0.53 >More info 0h hml Original data
130 WT(Ler) Rc50 -0.54 >More info -0.55 >More info WT(Ler) Dark Original data GEO bulk
131 GST 4 h (leaf) 0.41 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
132 WT(Ler) Rc15 -0.52 >More info -0.57 >More info WT(Ler) Dark Original data GEO bulk
133 WT hypoxia 0.50 >More info 0.59 >More info WT normoxia whole rosette Original data
134 Leaf GLU1-KO 0.57 >More info 0.52 >More info Leaf Col(0) rosette leaves Original data GEO bulk
135 DC3000 7h 0.52 >More info 0.56 >More info Mock 7h DC3000 Original data GEO bulk
136 Atss3 Light4 -0.50 >More info -0.58 >More info Atss3 Dark0.5 Original data GEO bulk
137 mbd6 mutant thaliana 10-day-old seedling 0.58 >More info 0.50 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
138 pap1-D/tt4 0.56 >More info 0.52 >More info Col-0 aerial part Original data
139 WT Col-0 Bgh inoculated 0.46 >More info 0.62 >More info WT Col-0 Un-inoculated Original data GEO bulk
140 Nicotinamide-93hr 0.49 >More info 0.59 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
141 Heat shock optimum 0.43 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
142 Seedling KUA1-IOX est 0.40 >More info 0.68 >More info Seedling KUA1-IOX mock Original data
143 treated group 0.44 >More info 0.64 >More info Control group Original data
144 scrm-D 0.54 >More info 0.53 >More info Col-0 WT whole seedling Original data GEO bulk
145 petiole in D 0.54 >More info 0.53 >More info petiole in WL petioles Original data GEO bulk
146 Col-0-avrB-6h 0.44 >More info 0.63 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
147 Stem tissue 5 days NAA 0.50 >More info 0.57 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
148 Dark 2day hml 0.58 >More info 0.49 >More info 0h hml Original data
149 bHLH122 ox -0.58 >More info -0.49 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
150 35SpBVR3 0.49 >More info 0.58 >More info WT Original data GEO bulk
151 Shoot -Cs 0.38 >More info 0.69 >More info Control-shoot Original data GEO bulk
152 IAA 2h 0.49 >More info 0.58 >More info control 2h root Original data GEO bulk
153 wrky33 Bc inoculation 14h 0.63 >More info 0.43 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
154 intact root auxin 0.52 >More info 0.54 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
155 35S:RPS4 eds1-2 24h -0.56 >More info -0.50 >More info 35S:RPS4 24h leaves Original data
156 Aerobic prt6 0.57 >More info 0.49 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
157 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.53 >More info -0.53 >More info 2d dark-grown WT seedling Original data GEO bulk
158 Cor 10h 0.52 >More info 0.54 >More info Mock 10h Cor Original data GEO bulk
159 IMI 4mM 0.55 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
160 DC3000 2 h (leaf) 0.45 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
161 Nicotinamide-53hr 0.45 >More info 0.61 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
162 Triazolopyrimidine EC50 0.46 >More info 0.60 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
163 Col BTH 0.39 >More info 0.67 >More info Col rosettes Original data GEO bulk
164 ERF96OE 0.48 >More info 0.58 >More info WT leaf Original data
165 WT Rc50 -0.53 >More info -0.52 >More info WT Dark red light whole seedling Original data GEO bulk
166 WT +Pep2 10h 0.55 >More info 0.50 >More info WT untreated Pep2 Original data GEO bulk
167 phr1 phl1 Root-Pi 0.50 >More info 0.55 >More info WT Shoot+Pi roots Original data GEO bulk
168 Dark 4 h pls UV-A 5 min -0.46 >More info -0.59 >More info Dark 4 h Original data Light treatments
169 Mutant nph4-1 (IAA) -0.46 >More info -0.59 >More info Col (IAA) Original data GEO bulk
170 Nicotinamide-49hr 0.46 >More info 0.59 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
171 Stem tissue 2 days NAA 0.34 >More info 0.71 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
172 vte2 leaves 48h LT 0.49 >More info 0.56 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
173 PRR5-VP 12h light on -0.57 >More info -0.48 >More info WT 12h light on whole plant Original data GEO bulk
174 Laer Flg22 2h 0.57 >More info 0.48 >More info Laer Control leaf discs Original data GEO bulk
175 ced1 -0.57 >More info -0.48 >More info WT PEG 6hr seedlings Original data GEO bulk
176 etiolated cop1BBX22-GFPox -0.50 >More info -0.54 >More info etiolated Col-0 whole seedlings Original data GEO bulk
177 rpl24 total 0.59 >More info 0.45 >More info WT total seedling shoot/aerial seedling Original data
178 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.64 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
179 CabpBVR2 0.52 >More info 0.52 >More info WT Original data GEO bulk
180 Te ozone 0.64 >More info 0.40 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
181 C58 35dpi 0.55 >More info 0.49 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
182 tunicamycin -0.43 >More info -0.61 >More info DMF Original data GEO bulk
183 NahG 0.45 >More info 0.59 >More info Col-0 Leaves Original data GEO bulk
184 Rsch 3d 0.44 >More info 0.60 >More info Rsch CA Leaves Original data
185 CT101 ozone 0.62 >More info 0.41 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
186 AvrRpm1 2 h (leaf) 0.51 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
187 R. solani AG8 0.59 >More info 0.44 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
188 Aerobic e1 ate2 0.52 >More info 0.51 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
189 Lipopolysaccaride4 h (leaf) 0.43 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
190 flu 0.49 >More info 0.54 >More info WT Col Original data GEO bulk
191 WT +elf18 2h 0.51 >More info 0.51 >More info WT untreated elf18 Original data GEO bulk
192 Dark 1day ivd 0.53 >More info 0.49 >More info 0h ivd Original data
193 NAA 6h 0.51 >More info 0.51 >More info before treatment NAA root Original data GEO bulk
194 clf-28 swn-7 0.57 >More info 0.45 >More info Col whole plant Original data GEO bulk
195 pif4pif5 mut dark -0.41 >More info -0.61 >More info WT dark Original data GEO bulk
196 WT 3h -P 0.42 >More info 0.60 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
197 DFPM 0.47 >More info 0.55 >More info control Original data GEO bulk
198 rcf1-1 cold 24h 0.44 >More info 0.58 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
199 seedling 1.5h after HZE atm-1 0.53 >More info 0.48 >More info seedling day 1 unirradiated atm-1 1.5h Original data
200 Col-0 ozone 0.61 >More info 0.40 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
201 Col-0 norflurazon 0.51 >More info 0.50 >More info Col-0 control Original data GEO bulk
202 35S:RPS4 eds1-2 8h -0.54 >More info -0.47 >More info 35S:RPS4 8h leaves Original data
203 leaf blade in FRD 0.46 >More info 0.55 >More info leaf blade in WL leaf blades Original data GEO bulk
204 16h Col-0 0.39 >More info 0.62 >More info 00h Col-0 Original data GEO bulk
205 sta1 0.47 >More info 0.54 >More info WT Original data GEO bulk
206 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.61 >More info 0.39 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
207 RPL18 TuMV inoculated polysomal RNA 0.57 >More info 0.43 >More info mock inoculated polysomal RNA PO Original data GEO bulk
208 coi1-16 ein2 sid2 ctrl -0.60 >More info -0.40 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
209 4d red light grown hmr-5 seedlings 0.52 >More info 0.48 >More info 4d red light grown WT(Col-0) seedlings Original data
210 ACC 3 h 0.44 >More info 0.56 >More info Mock 3 h Original data Basic hormone treatment of seedlings
211 UV Stress 24 h (shoot) 0.49 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
212 WT NAA/flg 2h 0.47 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
213 piffq FR 3h -0.43 >More info -0.57 >More info WT FR 3h whole seedling Original data GEO bulk
214 Col-0 6h NAA 0.45 >More info 0.55 >More info Col-0 6h MOCK Original data GEO bulk
215 08h Col-0 0.41 >More info 0.59 >More info 00h Col-0 Original data GEO bulk
216 S58-2 0.49 >More info 0.51 >More info wt Original data GEO bulk
217 Bay-0-3h IAA 0.55 >More info 0.44 >More info Bay-0-0h IAA whole plant Original data GEO bulk
218 ice1 control 0.59 >More info 0.40 >More info WT control Original data GEO bulk
219 pif4pif5 mut 24h FR -0.36 >More info -0.63 >More info WT 24h FR Original data GEO bulk
220 miR393 flg22 2h 0.42 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
221 Col-0 2h NAA 0.36 >More info 0.63 >More info Col-0 6h MOCK Original data GEO bulk
222 low R/FR mock spray 0.41 >More info 0.58 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
223 anac017-2 AntimycinA 3h -0.45 >More info -0.54 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
224 SLWF infested 0.43 >More info 0.56 >More info SLWF uninfested rosette tissue Original data GEO bulk
225 Drought Stress 24 h (shoot) 0.54 >More info 0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
226 C24 ozone 0.59 >More info 0.39 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
227 Col-0 INA 6d 0.59 >More info 0.39 >More info Col-0 MOCK 6d Original data GEO bulk
228 MIL4 ox 0.50 >More info 0.48 >More info Col Original data GEO bulk
229 WT in -N 0.47 >More info 0.51 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
230 8h-DC3000 avrRpm1 0.45 >More info 0.53 >More info 8h-DC3000 leaves Original data GEO bulk
231 Col-0 low R/FR 0.29 >More info 0.69 >More info Col-0 high R/FR low R/FR seedlings Original data GEO bulk
232 ein2-1 +Pep2 2h -0.44 >More info -0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
233 cop1 Seedling Dark -0.44 >More info -0.54 >More info WT Seedling Dark Original data GEO bulk
234 L2.5 mutant -0.50 >More info -0.47 >More info Wt Original data GEO bulk
235 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.50 >More info -0.47 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
236 mutant acs9B (single mutant) 0.56 >More info 0.41 >More info col control (single mutant) Original data GEO bulk
237 Col-0-1h IAA 0.55 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
238 aphid saliva treated 0.45 >More info 0.52 >More info control aphid saliva treated leaves Original data GEO bulk
239 Myzus persicae saliva 0.45 >More info 0.52 >More info Control Original data GEO bulk
240 Nicotinamide-77hr 0.45 >More info 0.52 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
241 gun1gun5 far-red pretreated -0.45 >More info -0.52 >More info WT far-red pretreated Original data GEO bulk
242 seedling 6h after HZE atm-1 0.38 >More info 0.59 >More info seedling day 1 unirradiated atm-1 6h Original data
243 seedling 6h after HZE WT 0.46 >More info 0.51 >More info seedling day 1 unirradiated WT 6h Original data
244 Sha-3h IAA 0.56 >More info 0.40 >More info Sha-0h IAA whole plant Original data GEO bulk
245 Dark 1day hml 0.50 >More info 0.46 >More info 0h hml Original data
246 Mutant arf2-6 -0.64 >More info -0.32 >More info Col Original data GEO bulk
247 sfr3 cold 0.50 >More info 0.46 >More info WT-cold aerial tissues Original data GEO bulk
248 AgNO3 3 h 0.46 >More info 0.50 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
249 Mutant nph4-1_arf19-1 (IAA) -0.43 >More info -0.53 >More info Col (IAA) Original data GEO bulk
250 NAA 3h 0.45 >More info 0.51 >More info before treatment NAA root Original data GEO bulk
251 Te 1d 0.43 >More info 0.53 >More info Te CA Leaves Original data
252 ein3 eil1 JA -0.40 >More info -0.55 >More info JA Whole seedling Original data GEO bulk
253 essp3/brm5 mutant -0.50 >More info -0.45 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
254 Mutant iaa17-6 (IAA) 0.58 >More info 0.37 >More info Col (IAA) Original data GEO bulk
255 Dark 6h wt 0.53 >More info 0.42 >More info 0h wt Original data
256 ARR22-ox (t-zeatin 3 h) 0.52 >More info 0.43 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
257 eto1-4 +370 -0.44 >More info -0.51 >More info eto1-4 whole seedling Original data GEO bulk
258 Imidazolinone EC50 0.38 >More info 0.57 >More info Carrier (Imidazolinone) Original data GEO bulk
259 Laer Flg22 1h 0.52 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
260 pad4-PsmES4326-24hpi -0.52 >More info -0.42 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
261 seedling 1.5h after HZE WT 0.50 >More info 0.44 >More info seedling day 1 unirradiated WT 1.5h Original data
262 low water potential 0.53 >More info 0.41 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
263 Mutant gh3.5-1D (AvrRpt2) 0.44 >More info 0.50 >More info Col-0 (AvrRpt2) Original data GEO bulk
264 rosette leaves bdg 0.36 >More info 0.58 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
265 GO5; 0h switch to ambient CO2 concentrations; -0.43 >More info -0.51 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
266 ice1 3H Cold 0.55 >More info 0.38 >More info WT 3H Cold Original data GEO bulk
267 Differentiation 24h 0.55 >More info 0.38 >More info Differentiation 0h leaves Original data
268 light -0.75 >More info -0.18 >More info dark light seedling Original data GEO bulk
269 Heat shock 20%Inhibition 0.51 >More info 0.42 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
270 ataf1-1 mutant Col-0 Un-inoculated -0.43 >More info -0.50 >More info WT Col-0 Un-inoculated Original data GEO bulk
271 2d dark-grown WT(Col-0)/1 hr red light -0.42 >More info -0.51 >More info 2d dark-grown WT seedling Original data GEO bulk
272 1h light (+Lincomycin) 0.41 >More info 0.52 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
273 Mutant iaa5_6_19(IAA) 0.53 >More info 0.39 >More info Col (IAA) Original data GEO bulk
274 eds16 whole leaf 5dpi -0.37 >More info -0.55 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
275 Glyphosate EC50 0.36 >More info 0.56 >More info Carrier (Glyphosate) Original data GEO bulk
276 tt4 -0.42 >More info -0.50 >More info WT aerial region Original data GEO bulk
277 Laer Flg22+GA 2h 0.51 >More info 0.40 >More info Laer Control leaf discs Original data GEO bulk
278 Col whole leaf 5 dpi 0.40 >More info 0.51 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
279 albino Ds13-2198-1 -0.37 >More info -0.54 >More info control Original data GEO bulk
280 cys-c1 leaf -0.50 >More info -0.41 >More info Leaf-WT leaves Original data GEO bulk
281 WT+H2O2 0.41 >More info 0.50 >More info WT H2O2 Original data GEO bulk
282 roots IAA 0.36 >More info 0.54 >More info roots mock Original data GEO bulk
283 24h light (+Lincomycin) 0.32 >More info 0.58 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
284 mutant acs2C (single mutant) 0.50 >More info 0.39 >More info col control (single mutant) Original data GEO bulk
285 atmyc2 Seedling BL -0.18 >More info -0.71 >More info WT Seedling BL Original data GEO bulk
286 12h Col-0 0.32 >More info 0.56 >More info 00h Col-0 Original data GEO bulk
287 pnp1-1 1wk +P 0.50 >More info 0.38 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
288 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.36 >More info 0.52 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
289 ein2-1 24hpi A. brassicicola -0.37 >More info -0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
290 IAA 0.5h 0.29 >More info 0.59 >More info control 0.5h root Original data GEO bulk
291 SCR-GR Time 1H Dex 0.35 >More info 0.52 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
292 Cd 24h root -0.37 >More info -0.50 >More info WT-Untreated Shoot Original data GEO bulk
293 del1-1 mutant 5d uninfected 0.37 >More info 0.50 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
294 Bur-0-1h IAA 0.50 >More info 0.36 >More info Bur-0h IAA whole plant Original data GEO bulk
295 sicy-192 cotyledons 0.29 >More info 0.57 >More info WT cotyledons cotyledons Original data
296 gpa1 -ABA GC -0.32 >More info -0.53 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
297 ulp1c ulp1d +Pto 0.34 >More info 0.51 >More info ulp1c ulp1d mock Original data GEO bulk
298 seedling -S Exp 0.29 >More info 0.56 >More info seedling FN Exp seedling Original data
299 eif3h non-polysome 0.60 >More info 0.25 >More info WT non-polysome Original data GEO bulk
300 npr1 0.35 >More info 0.50 >More info WT(COL) Original data GEO bulk
301 WT 2-4h Xanthomonas 0.23 >More info 0.62 >More info WT T0 Original data GEO bulk
302 seedling 12h after Gamma atm-1 0.27 >More info 0.58 >More info seedling day 1 unirradiated atm-1 12h Original data
303 Atss3 Light1 -0.33 >More info -0.51 >More info Atss3 Dark0.5 Original data GEO bulk
304 toc1-1-85hr -0.32 >More info -0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
305 nNOS-control 0.34 >More info 0.50 >More info WT-control leaf Original data
306 seedling 12h after Gamma WT 0.29 >More info 0.55 >More info seedling day 1 unirradiated WT 12h Original data
307 coi1-16 ein2 sid2 ozone 0.56 >More info 0.27 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
308 des1.1 0.28 >More info 0.55 >More info Leaves-WT leaf Original data GEO bulk
309 cca1-lhy 30m light 0.30 >More info 0.53 >More info 30m light whole seedlings Original data GEO bulk
310 Laer pretreat JA Flg22 2h 0.51 >More info 0.31 >More info Laer pretreat water control leaf discs Original data GEO bulk
311 6h volatiles Sp. HRO-C48 0.31 >More info 0.51 >More info 6h untreated whole seedling Original data GEO bulk
312 shoot control p35S 0.25 >More info 0.57 >More info shoot control total Original data GEO bulk
313 E.orontii Infection 3 day 0.25 >More info 0.56 >More info Uninfection 3 day Original data Elicitor treatments
314 seedling 12h after HZE atm-1 0.25 >More info 0.56 >More info seedling day 1 unirradiated atm-1 12h Original data
315 ein2 1% sucrose 14-day-old -0.24 >More info -0.56 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
316 agb1 gpa1 -ABA LF 0.29 >More info 0.51 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
317 IAA 1h 0.25 >More info 0.55 >More info control 1h root Original data GEO bulk
318 Laer pretreat GA+JA Flg22 0h 0.51 >More info 0.28 >More info Laer pretreat water control leaf discs Original data GEO bulk
319 agb1 -ABA LF 0.21 >More info 0.58 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
320 Light 3day wt -0.52 >More info -0.25 >More info 0h wt Original data
321 ani1 T0.5 -0.25 >More info -0.52 >More info WT T0.5 root tissue Original data GEO bulk
322 PNO8 3 h 0.25 >More info 0.50 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
323 Col-0 DCA 6d 0.54 >More info 0.20 >More info Col-0 MOCK 6d Original data GEO bulk
324 12h-DC3000 avrRpm1 0.23 >More info 0.50 >More info 12h-DC3000 leaves Original data GEO bulk
325 WT Red light 1h -0.23 >More info -0.50 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
326 Selenate (shoot) 0.17 >More info 0.55 >More info Ws (shoot) Original data GEO bulk
327 Shoot Selenate 0.17 >More info 0.55 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
328 Differentiation 36h 0.54 >More info 0.18 >More info Differentiation 0h leaves Original data
329 Differentiation 48h 0.52 >More info 0.20 >More info Differentiation 0h leaves Original data
330 20h Col-0 0.20 >More info 0.52 >More info 00h Col-0 Original data GEO bulk
331 Shoot submergence 7h 0.70 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
332 35:SUB1A 0.51 >More info 0.18 >More info WT whole seedling Original data GEO bulk
333 shoot hypoxia p35S 0.18 >More info 0.51 >More info shoot hypoxia total Original data GEO bulk
334 GO5; 8h switch to ambient CO2 concentrations; 0.08 >More info 0.61 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
335 seed germinating in countinuous light 24h SL -0.00 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
336 aox1a:rpoTmp untreated 0.15 >More info 0.51 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
337 ABA SA 24h 0.09 >More info 0.54 >More info EtOH 24h 24hr Original data GEO bulk
338 xyl-grown cell culture- 1h 1mM Fru -0.11 >More info -0.52 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
339 WT zebularine 5d -0.51 >More info -0.11 >More info WT mock 5d shoot apical meristem Original data
340 seedling 3h after HZE WT 0.60 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
341 Root wt CLE10 0.06 >More info 0.55 >More info Root wt CLE25 root tip Original data GEO bulk
342 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
343 ABA JA 24h 0.03 >More info 0.58 >More info EtOH 24h 24hr Original data GEO bulk
344 Dark 2day ivd 0.61 >More info -0.01 >More info 0h ivd Original data
345 siliques AtHb1 control 0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
346 vte2-1 1d vernalization 0.07 >More info 0.52 >More info WT 1d vernalization Original data GEO bulk
347 Laer pretreat GA Flg22 0h 0.50 >More info 0.09 >More info Laer pretreat water control leaf discs Original data GEO bulk
348 -Sulfate 24 h 0.02 >More info 0.56 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
349 opr3 OPDA 2 h -0.04 >More info 0.62 >More info opr3 0 h Original data GEO bulk
350 WT cotyledons -0.50 >More info -0.07 >More info Control for tissue data cotyledons Original data
351 HairpinZ 4 h (leaf) 0.60 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
352 anac017-2 water 3h -0.52 >More info -0.04 >More info WT water 3h 3h_water Original data GEO bulk
353 pvip1 pvip2 seedling 0.51 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
354 P. infestans 6 h (leaf) 0.63 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
355 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
356 Shoot apex inflorescence (after bolting) -0.21 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
357 Col PSTDC3000 24h 0.53 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
358 bri1-116 -0.34 >More info 0.73 >More info Col seedling Original data GEO bulk
359 Light 3day hml -0.42 >More info 0.66 >More info 0h hml Original data