4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on opr3 OPDA 2 h
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List of experiments correlated with "opr3 OPDA 2 h"  Help Download transcriptome of top 30
Score Experiment Correlation from
opr3 OPDA 2 h		 Correlation to
opr3 OPDA 2 h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 opr3 OPDA 2 h 1.00 >More info 1.00 >More info opr3 0 h Original data GEO bulk
2 opr3 JA 0.5 h 0.79 >More info 0.82 >More info opr3 0 h Original data GEO bulk
3 opr3 OPDA 0.5 h 0.72 >More info 0.84 >More info opr3 0 h Original data GEO bulk
4 opr3 JA 2 h 0.79 >More info 0.69 >More info opr3 0 h Original data GEO bulk
5 opr3 OPDA 8 h 0.73 >More info 0.69 >More info opr3 0 h Original data GEO bulk
6 Leafminer damaged seedlings 0.69 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
7 siliques AtHb1 control 0.73 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
8 opr3 JA 8 h 0.91 >More info 0.30 >More info opr3 0 h Original data GEO bulk
9 flu 0.74 >More info 0.39 >More info WT Col Original data GEO bulk
10 Heat shock optimum 0.48 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
11 seed germinating in countinuous light 24h SL 0.42 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
12 35S::PI ap3-3 35S::AP-GR +DEX 0.62 >More info 0.47 >More info 0hr DEX Original data GEO bulk
13 flu over-tAPX 0.70 >More info 0.39 >More info WT Col Original data GEO bulk
14 Shoot apex inflorescence (after bolting) 0.42 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
15 -Sulfate 2 h 0.78 >More info 0.27 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
16 shoot-10 μM DEX- 6 hr 0.60 >More info 0.44 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
17 8h-DC3000 avrRpm1 0.70 >More info 0.34 >More info 8h-DC3000 leaves Original data GEO bulk
18 Col0-PsmES4326-24hpi 0.41 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
19 WT H2O2 3h 0.56 >More info 0.42 >More info WT water 3h 3h_H2O2 Original data GEO bulk
20 gun1gun5 far-red pretreated -0.70 >More info -0.27 >More info WT far-red pretreated Original data GEO bulk
21 PNO8 12 h 0.50 >More info 0.47 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
22 Cs shoot -0.39 >More info -0.58 >More info control shoot Original data GEO bulk
23 1 h Light IP RNA -0.69 >More info -0.27 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
24 cat2-2; 8h switch to ambient CO2 concentrations; 0.39 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
25 AgNO3 3 h 0.75 >More info 0.20 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
26 P.syringae AvrRpt2 4 h (leaf) 0.74 >More info 0.21 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 Pst-DC3000(avrRpm1)-4hpi 0.45 >More info 0.50 >More info Pst-DC3000-4hpi Original data GEO bulk
28 plant (tga2-5-6) 4h phytoprostane A1 0.58 >More info 0.35 >More info plant (tga2-5-6) 4h control Original data GEO bulk
29 leaf blade in D 0.62 >More info 0.31 >More info leaf blade in WL leaf blades Original data GEO bulk
30 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
31 Laer Alternaria 3dpi -0.75 >More info -0.15 >More info Laer Control leaf discs Original data GEO bulk
32 Methyl Jasmonate 3 h 0.51 >More info 0.39 >More info Mock 3 h Original data Basic hormone treatment of seedlings
33 Myzus persicae saliva 0.68 >More info 0.22 >More info Control Original data GEO bulk
34 HopZ1a treated ulp1c ulp1d 0.76 >More info 0.14 >More info col Original data GEO bulk
35 aphid saliva treated 0.68 >More info 0.22 >More info control aphid saliva treated leaves Original data GEO bulk
36 Leafminer systemically damaged thaliana seedlings 0.62 >More info 0.28 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
37 coi1-16 ein2 sid2 ctrl -0.68 >More info -0.21 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
38 pmr5 pmr6 0.70 >More info 0.19 >More info Col-0 Original data GEO bulk
39 rosette Dark Wounded 0.62 >More info 0.26 >More info rosette Dark Control Original data GEO bulk
40 Col-0 ozone 0.66 >More info 0.22 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
41 plant (Col-0) 4h OPDA 0.59 >More info 0.29 >More info plant (Col-0) 4h control Original data GEO bulk
42 rosette leaves fdh 0.70 >More info 0.18 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
43 OPDA 4 h 0.59 >More info 0.29 >More info Col-0 Original data GEO bulk
44 sfr6 drought -0.53 >More info -0.34 >More info WT drought All aerial tissue Original data GEO bulk
45 shoot-10 μM DEX- 12 hr 0.51 >More info 0.36 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
46 WT AntimycinA 3h 0.64 >More info 0.23 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
47 Leafminer locally damaged thaliana seedlings 0.69 >More info 0.18 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
48 leaf blade in FRD 0.68 >More info 0.18 >More info leaf blade in WL leaf blades Original data GEO bulk
49 SA 4mM 0.66 >More info 0.20 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
50 toc1-1-77hr 0.61 >More info 0.25 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
51 Col-0-avrB-6h 0.75 >More info 0.11 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
52 sav3-2 shade 0.53 >More info 0.32 >More info Col-0 shade seedlings Original data GEO bulk
53 RGA-GR-DEX 0.67 >More info 0.18 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
54 Mutant sav3-2 (SH) 0.53 >More info 0.32 >More info Col-0 (SH) Original data GEO bulk
55 DC3000 24h 0.56 >More info 0.29 >More info Mock 24h DC3000 Original data GEO bulk
56 Drought Stress 24 h (shoot) 0.64 >More info 0.21 >More info Stress mock 24 h (shoot) Original data Stress treatments
57 Mutant coi1(leaf) -0.58 >More info -0.27 >More info Col-0 (leaf) Original data GEO bulk
58 arr-dmso-sample 0.55 >More info 0.29 >More info Wt-dmso-sample seedling Original data
59 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.66 >More info 0.18 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
60 Atss3 Light4 -0.64 >More info -0.20 >More info Atss3 Dark0.5 Original data GEO bulk
61 tor mutant glucose 0.64 >More info 0.20 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
62 6h +Pi -0.54 >More info -0.30 >More info 6h -Pi root Original data GEO bulk
63 sfr3 warm 0.57 >More info 0.27 >More info WT-warm aerial tissues Original data GEO bulk
64 rosette Light Wounded 0.63 >More info 0.20 >More info rosette Light Control Original data GEO bulk
65 AtMYB30-ox T0 -0.56 >More info -0.27 >More info WT T0 Original data GEO bulk
66 estradiole-induced ANAC092 -0.33 >More info -0.50 >More info transgenic (empty vector inducible system) Original data GEO bulk
67 Col BTH 0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
68 CHLM overexpression -0.60 >More info -0.23 >More info Col-0 estr green tissue Original data GEO bulk
69 P.syringae vir 4 h (leaf) 0.60 >More info 0.23 >More info Mock 4 h (leaf) Original data Elicitor treatments
70 ARR22-ox (t-zeatin 3 h) 0.70 >More info 0.13 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
71 21h-DC3000 avrRpm1 -0.56 >More info -0.26 >More info 21h-DC3000 leaves Original data GEO bulk
72 Prohexadione 3 h 0.59 >More info 0.23 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
73 CMP 4hr 0.61 >More info 0.20 >More info Acetone 4hr root Original data GEO bulk
74 Ws 100mM NaCl 0.60 >More info 0.20 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
75 Ws leaf 100mM NaCl 0.60 >More info 0.20 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
76 elf3-7-23ºC -0.65 >More info -0.15 >More info WT-23ºC Original data GEO bulk
77 AvrRpm1 2 h (leaf) 0.57 >More info 0.23 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
78 high R/FR JA spray 0.55 >More info 0.24 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
79 gpa1-4/agb1-2 ozone 2d -0.56 >More info -0.23 >More info Col ozone 2d ozone Original data GEO bulk
80 leaf13 0.50 >More info 0.28 >More info unwounded leaves none Original data GEO bulk
81 rcf1-1 cold 12h 0.64 >More info 0.14 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
82 ceh1 mutant 0.64 >More info 0.13 >More info Parent line Original data
83 ice1 control 0.69 >More info 0.07 >More info WT control Original data GEO bulk
84 AFB1 0h 0.55 >More info 0.21 >More info Col 0h Leaf Original data GEO bulk
85 ADD3 -0.52 >More info -0.24 >More info WT aerial part Original data GEO bulk
86 gh3.5-1D 48 hpi 0.70 >More info 0.06 >More info Col-0 uninoculated Original data GEO bulk
87 Col-0 flu HL 3h 0.54 >More info 0.22 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
88 A. thaliana-A. lyrata hybrid -0.64 >More info -0.12 >More info A. thaliana mature leaves before flowering Original data GEO bulk
89 tt4 0.55 >More info 0.21 >More info Col-0 aerial part Original data
90 upf1 0.58 >More info 0.17 >More info WT whole plant Original data GEO bulk
91 1.5 hr ammonium 0.51 >More info 0.24 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
92 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.58 >More info 0.17 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
93 aox1a(line) untreated -0.71 >More info -0.04 >More info WT(Col0) untreated (control aox1a) leaf Original data
94 TiO2 germinant -0.60 >More info -0.14 >More info Millipore Water germinant TiO2 seedling Original data
95 WT resupplied Pi 4h 0.76 >More info -0.02 >More info WT complete seedlings Original data
96 Paclobutrazol 12 h 0.61 >More info 0.13 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
97 4d red light grown hmr-5 seedlings 0.58 >More info 0.16 >More info 4d red light grown WT(Col-0) seedlings Original data
98 desiccated mature pollen grains -0.22 >More info -0.52 >More info hydrated pollen grains Original data GEO bulk
99 SCR-GR Time 12H Dex 0.55 >More info 0.17 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
100 vte2 leaves 120h LT 0.68 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
101 Pto inoculated 0.65 >More info 0.07 >More info col Original data GEO bulk
102 seedlings protease IV 0.64 >More info 0.08 >More info seedlings nontreated control whole seedling Original data
103 Dark 3day ivd 0.70 >More info 0.02 >More info 0h ivd Original data
104 WT no Pi 0.72 >More info 0.00 >More info WT complete seedlings Original data
105 9 hr Hypoxia 1 hr recovery IP RNA 0.57 >More info 0.15 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
106 Col-Luc WT 3h antimycin A 0.64 >More info 0.08 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
107 3x(m) 0.10 >More info 0.62 >More info 2x two week old seedlings Original data
108 FAMA induced 48h 0.72 >More info -0.01 >More info control 48h Whole seedling Original data GEO bulk
109 pericycle control 0.64 >More info 0.07 >More info Control for tissue data mock pericycle Original data GEO bulk
110 upf3 0.53 >More info 0.18 >More info WT whole plant Original data GEO bulk
111 Col upon hypoxia 6 hrs 0.62 >More info 0.08 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
112 epidermis control 0.64 >More info 0.06 >More info Control for tissue data mock epidermis Original data GEO bulk
113 Botrytis cinerea 48h 0.57 >More info 0.13 >More info control 48h Original data GEO bulk
114 rosette leaves lcr 0.52 >More info 0.18 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
115 HopZ1a treated 0.60 >More info 0.10 >More info col Original data GEO bulk
116 3x(p) 0.18 >More info 0.52 >More info 2x two week old seedlings Original data
117 pap1-D/tt4 0.52 >More info 0.17 >More info Col-0 aerial part Original data
118 Te ozone 0.55 >More info 0.14 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
119 pmr5 0.55 >More info 0.14 >More info Col-0 Original data GEO bulk
120 cpr5scv1 0.61 >More info 0.08 >More info WT(COL) Original data GEO bulk
121 Col whole leaf 6hpi 0.50 >More info 0.19 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
122 Dark 2day hml 0.63 >More info 0.06 >More info 0h hml Original data
123 vte1-1 1d vernalization 0.58 >More info 0.11 >More info WT 1d vernalization Original data GEO bulk
124 CMP 24hr 0.57 >More info 0.12 >More info Acetone 24hr root Original data GEO bulk
125 Col-0 drought 0.62 >More info 0.07 >More info Col-0 control Original data GEO bulk
126 npr1 sni1 ssn2 -0.56 >More info -0.12 >More info npr1 sni1 water water seedling Original data GEO bulk
127 wt systemic wounding 0.52 >More info 0.16 >More info wt control leaves Original data GEO bulk
128 SOS1 0mM NaCl 0.53 >More info 0.14 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
129 bak1-3 +Pep2 10h 0.56 >More info 0.11 >More info WT +Pep2 10h Pep2 Original data GEO bulk
130 R. solani AG8 0.50 >More info 0.17 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
131 35S:VND7-VP16-GR+CHX -0.15 >More info -0.52 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
132 siliques AtHb1 hypoxia 0.57 >More info 0.10 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
133 SA Treated 0.59 >More info 0.08 >More info Water Original data GEO bulk
134 Prohexadione 12 h 0.71 >More info -0.04 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
135 ataf1-1 mutant Col-0 Un-inoculated -0.52 >More info -0.14 >More info WT Col-0 Un-inoculated Original data GEO bulk
136 mil4 BTH 0.67 >More info -0.01 >More info Col BTH rosettes Original data GEO bulk
137 DC3000 2 h (leaf) 0.56 >More info 0.10 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
138 PRR5-VP 12h light on -0.55 >More info -0.11 >More info WT 12h light on whole plant Original data GEO bulk
139 pepr1-1 Pepr2-3 +Pep2 2h -0.52 >More info -0.14 >More info WT +Pep2 2h Pep2 Original data GEO bulk
140 Chitosan 3h Treatment 0.51 >More info 0.15 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
141 msh1 albino 0.59 >More info 0.07 >More info WT aerial part Original data GEO bulk
142 CT101 ozone 0.50 >More info 0.15 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
143 QC 0.60 >More info 0.05 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
144 columella control 0.61 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
145 Sulfometuron EC50 0.52 >More info 0.13 >More info Carrier Original data GEO bulk
146 npr1-1 SA -0.57 >More info -0.08 >More info Col-0 SA complete seedling Original data
147 gun1-1 +lincomycin -0.71 >More info 0.06 >More info Col-0 +lincomycin Original data GEO bulk
148 GO5; 0h switch to ambient CO2 concentrations; -0.55 >More info -0.09 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
149 PBZ 0.54 >More info 0.10 >More info none PBZ Rosette Original data GEO bulk
150 T6 leaf-drought 0.50 >More info 0.14 >More info T6 leaf-well watered Original data GEO bulk
151 Dark 2day ivd 0.65 >More info -0.01 >More info 0h ivd Original data
152 Mutant gh3.5-1D (AvrRpt2) 0.54 >More info 0.10 >More info Col-0 (AvrRpt2) Original data GEO bulk
153 Col-0 24hpi A. brassicicola 0.62 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
154 D2O 0.62 >More info 0.02 >More info H2O seedling Original data GEO bulk
155 WT Shoot-Pi 0.54 >More info 0.10 >More info WT Shoot+Pi shoots Original data GEO bulk
156 Dark 2day wt 0.56 >More info 0.07 >More info 0h wt Original data
157 Dark 3day hml 0.54 >More info 0.09 >More info 0h hml Original data
158 root Dosed gold 0.51 >More info 0.12 >More info root No gold .125 mM gold 24 h roots Original data
159 ATR1 OE 0.55 >More info 0.08 >More info WT for ATR1/MYB51 Original data GEO bulk
160 0.125 mM gold 24 h 0.51 >More info 0.12 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
161 S17 0.61 >More info 0.02 >More info Control for tissue data shoot apical meristem Original data GEO bulk
162 PAHs stress 0.68 >More info -0.05 >More info exp control phenanthrene whole plants Original data GEO bulk
163 aerial organ callus inducing medium 48 h 0.68 >More info -0.06 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
164 Callus 0.65 >More info -0.03 >More info Control for tissue data callus Original data GEO bulk
165 opr3 OPDA 22 h 0.58 >More info 0.04 >More info opr3 0 h Original data GEO bulk
166 R. solani AG2-1 0.51 >More info 0.11 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
167 anac017-2 AntimycinA 3h -0.52 >More info -0.10 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
168 Var2-1 roots 2hr KCl control -0.52 >More info -0.10 >More info Col0 roots 2hr KCl control root Original data GEO bulk
169 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.70 >More info -0.08 >More info Control for tissue data Original data GEO bulk
170 cpr5npr1svi1 0.57 >More info 0.05 >More info WT(COL) Original data GEO bulk
171 Anther 0.66 >More info -0.04 >More info Control for tissue data anther Original data
172 rcf1-1 cold 0h 0.66 >More info -0.04 >More info WT cold 0h Control seedlings Original data GEO bulk
173 RRE2 Chitin 0.53 >More info 0.08 >More info Chitin Original data GEO bulk
174 Col-0 INA 48h 0.50 >More info 0.11 >More info Col-0 MOCK 48h Original data GEO bulk
175 phloem sieve cells and companion cells 0.63 >More info -0.02 >More info Control for tissue data phloem Original data GEO bulk
176 RPL18 TuMV inoculated total RNA 0.50 >More info 0.11 >More info mock inoculated total RNA PO Original data GEO bulk
177 col-5 hrpA 12h 0.59 >More info 0.02 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
178 GST NPP1 4 h (leaf) 0.53 >More info 0.07 >More info Mock 4 h (leaf) Original data Elicitor treatments
179 Osmotic Stress 24 h (shoot) 0.50 >More info 0.10 >More info Stress mock 24 h (shoot) Original data Stress treatments
180 spx1 spx2 complete 0.59 >More info 0.01 >More info WT complete seedlings Original data
181 pho1 0.64 >More info -0.04 >More info Col2WT Original data GEO bulk
182 eif3h non-polysome 0.52 >More info 0.08 >More info WT non-polysome Original data GEO bulk
183 ice1 24H Cold 0.63 >More info -0.03 >More info WT 24H Cold Original data GEO bulk
184 lec1-1 Post-Mature Green Seed 0.58 >More info 0.02 >More info Control for tissue data Original data GEO bulk
185 vte2-1 3d vernalization 0.58 >More info 0.02 >More info WT 3d vernalization Original data GEO bulk
186 Mutant arf19-1 (IAA) 0.53 >More info 0.06 >More info Col (IAA) Original data GEO bulk
187 35:SUB1A 0.55 >More info 0.04 >More info WT whole seedling Original data GEO bulk
188 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.67 >More info -0.08 >More info Control for tissue data Original data GEO bulk
189 mature endodermis glcal 0.63 >More info -0.04 >More info Control for tissue data endodermis Original data GEO bulk
190 scrm-D 0.57 >More info 0.02 >More info Col-0 WT whole seedling Original data GEO bulk
191 P.p 30hai 0.50 >More info 0.09 >More info At-Control roots Original data GEO bulk
192 mkk1/mkk2 24h BTH rep 0.58 >More info 0.01 >More info Col-0 24h BTH rep Original data GEO bulk
193 Laer pretreat GA Flg22 1h -0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
194 ice1 6H Cold 0.67 >More info -0.09 >More info WT 6H Cold Original data GEO bulk
195 overexpresser LBD38 in -N -0.52 >More info -0.06 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
196 rpoTmp(line) MLD stressed 0.54 >More info 0.04 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
197 35S:RPS4 eds1-2 24h -0.51 >More info -0.07 >More info 35S:RPS4 24h leaves Original data
198 triploid female excess -0.06 >More info -0.52 >More info tetraploid Original data GEO bulk
199 aerial organ callus inducing medium 24h 0.62 >More info -0.04 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
200 OH1 0.50 >More info 0.08 >More info Col-0 leaves Original data GEO bulk
201 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.65 >More info -0.08 >More info Control for tissue data Original data GEO bulk
202 bbx24 in Simulated Shade -0.54 >More info -0.03 >More info WT in simulated shade shade seedling Original data
203 FHY3p far-red+DEX 0.55 >More info 0.02 >More info FHY3p far-red+mock Original data GEO bulk
204 rGRF 0.50 >More info 0.07 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
205 Section Root from70 mm to 340 mm harvested
immediately		 0.64 >More info -0.07 >More info Control for tissue data Original data GEO bulk
206 MIL4 ox BTH 0.52 >More info 0.05 >More info Col BTH Original data GEO bulk
207 del1-1 mutant 5d uninfected 0.59 >More info -0.02 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
208 tor mutant 0.60 >More info -0.03 >More info WT (Col) none seedlings Original data GEO bulk
209 shoots bhlh100/101 0uM Fe 0.50 >More info 0.06 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
210 rcf1-1 cold 24h 0.53 >More info 0.03 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
211 cortex 0.62 >More info -0.06 >More info Control for tissue data cortex Original data GEO bulk
212 anac017-1 H2O2 3h -0.55 >More info -0.01 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
213 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.65 >More info -0.09 >More info Control for tissue data Original data GEO bulk
214 Red Light 4 h 0.50 >More info 0.06 >More info White Light 4 h Original data Light treatments
215 AtHB8 0.55 >More info 0.01 >More info Control for tissue data shoot apical meristem Original data GEO bulk
216 WT 1mM phosphate 8 hours. -0.56 >More info 0.00 >More info WT control (not supplemented). Original data
217 agp6 agp11 pollen tube 0.57 >More info -0.01 >More info WT pollen tube pollen tube Original data GEO bulk
218 tetraploid -0.01 >More info 0.57 >More info diploid Original data GEO bulk
219 Elevated CO2 fully expanded leaf 0.51 >More info 0.04 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
220 NahG 0.61 >More info -0.06 >More info Col-0 Leaves Original data GEO bulk
221 P. infestans 6 h (leaf) 0.70 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
222 10min Reillumination IP RNA -0.57 >More info 0.02 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
223 Phaseolicola 2 h (leaf) 0.54 >More info 0.00 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
224 Col-0-3h IAA 0.62 >More info -0.08 >More info Col-0-0h IAA whole plant Original data GEO bulk
225 CMV-A2b mutant 0.52 >More info 0.02 >More info Mock-At Aerial tissues Original data GEO bulk
226 Col ozone 2d 0.51 >More info 0.03 >More info Col clean-air 2d ozone Original data GEO bulk
227 low water potential 0.53 >More info 0.01 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
228 Sepals stage15 0.59 >More info -0.05 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
229 ga1-3 1h GA4 -0.59 >More info 0.05 >More info ga1-3 1h water shoots Original data GEO bulk
230 CabpBVR2 0.51 >More info 0.02 >More info WT Original data GEO bulk
231 msh1 recA3 heat shock 0.52 >More info 0.01 >More info WT heat shock above-ground parts Original data GEO bulk
232 chl1-12 10mM NH4NO3 0.54 >More info -0.02 >More info col 10mM NH4NO3 Root Original data
233 Ambient CO2 LIMITING N NIGHT -0.56 >More info 0.04 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
234 treated group 0.52 >More info -0.01 >More info Control group Original data
235 ani1 T0.5 -0.66 >More info 0.15 >More info WT T0.5 root tissue Original data GEO bulk
236 Bud 0.56 >More info -0.05 >More info Control for tissue data pollen grains and tubes Original data
237 OE-HRA1 2HS  0.56 >More info -0.05 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
238 Flowers stage15 0.57 >More info -0.06 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
239 lec1-1 Mature Green Seed 0.55 >More info -0.04 >More info Control for tissue data Original data GEO bulk
240 aln-1 0.61 >More info -0.10 >More info Col-0 Aerial part of seedlings Original data
241 sng1 -0.01 >More info 0.52 >More info WT aerial region Original data GEO bulk
242 seed freshly harvested H 0.50 >More info 0.00 >More info Control for tissue data seed Original data GEO bulk
243 amiR-tor induced 3d 0.52 >More info -0.02 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
244 msh1 recA3 untreated 0.54 >More info -0.04 >More info WT untreated above-ground parts Original data GEO bulk
245 in vivo pollen tube 0.56 >More info -0.07 >More info Control for tissue data pollen tube Original data GEO bulk
246 median nectary stage 14-15 0.56 >More info -0.07 >More info Control for tissue data median nectaries Original data GEO bulk
247 flower 0.55 >More info -0.06 >More info Control for tissue data flower Original data GEO bulk
248 lateral nectary stage 14-15 0.56 >More info -0.07 >More info Control for tissue data lateral nectaries Original data GEO bulk
249 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.58 >More info -0.09 >More info Control for tissue data Original data GEO bulk
250 vte2 leaves 48h LT 0.60 >More info -0.11 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
251 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.57 >More info -0.08 >More info Control for tissue data Original data GEO bulk
252 frb1 mutant 0.54 >More info -0.06 >More info WT whole seedling Original data GEO bulk
253 mkk1/mkk2 control rep 0.51 >More info -0.03 >More info Col-0 Time 0 rep Original data GEO bulk
254 SLWF infested 0.58 >More info -0.10 >More info SLWF uninfested rosette tissue Original data GEO bulk
255 20h Col-0 0.51 >More info -0.04 >More info 00h Col-0 Original data GEO bulk
256 WT in -N 0.55 >More info -0.08 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
257 SCR-GR Time 6H Dex 0.55 >More info -0.09 >More info SCR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
258 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.57 >More info -0.11 >More info Control for tissue data Original data GEO bulk
259 Col PSTDC3000 24h 0.55 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
260 250uM KNO3 20min shoots -0.64 >More info 0.22 >More info 250uM KCL 20min shoots shoots Original data GEO bulk
261 CCA1-ox 6am non-polysomal -0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
262 pepr1-1 Pepr2-3 untreated 0.56 >More info -0.15 >More info WT untreated untreated Original data GEO bulk
263 Flower (stage12) 0.50 >More info -0.11 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
264 Constans-mutant 0.59 >More info -0.20 >More info Col control above-ground whole plant Original data GEO bulk
265 B.cinerea 18 h infection 0.55 >More info -0.19 >More info Mock 18 h Original data Botrytis cinerea infection
266 Botrytis cinerea 18h 0.55 >More info -0.19 >More info control 18h Original data GEO bulk
267 bri1-116 -0.40 >More info 0.73 >More info Col seedling Original data GEO bulk
268 Cs root 0.17 >More info -0.50 >More info control root Original data GEO bulk
269 amiR-tor induced 6d 0.60 >More info -0.37 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk