4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on bak1-3 +Pep2 10h
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "bak1-3 +Pep2 10h"  Help Download transcriptome of top 30
Score Experiment Correlation from
bak1-3 +Pep2 10h		 Correlation to
bak1-3 +Pep2 10h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 bak1-3 +Pep2 10h 1.00 >More info 1.00 >More info WT +Pep2 10h Pep2 Original data GEO bulk
2 DFPM 0.86 >More info 0.86 >More info control Original data GEO bulk
3 CMP 4hr 0.81 >More info 0.80 >More info Acetone 4hr root Original data GEO bulk
4 CMP 24hr 0.81 >More info 0.79 >More info Acetone 24hr root Original data GEO bulk
5 Fenclorim 4hr 0.81 >More info 0.78 >More info Acetone 4hr root Original data GEO bulk
6 ABA DFPM 0.83 >More info 0.76 >More info control Original data GEO bulk
7 IMI 4mM 0.77 >More info 0.82 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
8 35S:RPS4 eds1-2 24h -0.75 >More info -0.82 >More info 35S:RPS4 24h leaves Original data
9 seedlings-week-old RECA1-overexpressing
transgenic		 0.75 >More info 0.82 >More info seedlings-week-old Col-0 seedlings Original data
10 AgNO3 3 h 0.74 >More info 0.82 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
11 Sulfometuron EC50 0.80 >More info 0.76 >More info Carrier Original data GEO bulk
12 Cor 10h 0.75 >More info 0.80 >More info Mock 10h Cor Original data GEO bulk
13 35S:RPS4 eds1-2 8h -0.77 >More info -0.78 >More info 35S:RPS4 8h leaves Original data
14 root Dosed gold 0.79 >More info 0.75 >More info root No gold .125 mM gold 24 h roots Original data
15 0.125 mM gold 24 h 0.79 >More info 0.75 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
16 Botrytis cinerea 48h 0.76 >More info 0.77 >More info control 48h Original data GEO bulk
17 TNT-seedlings 0.67 >More info 0.86 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
18 P.p 30hai 0.78 >More info 0.75 >More info At-Control roots Original data GEO bulk
19 P.p 6hai 0.76 >More info 0.76 >More info At-Control roots Original data GEO bulk
20 Seedling KUA1-IOX est 0.74 >More info 0.78 >More info Seedling KUA1-IOX mock Original data
21 Col-0 9 hpi A. brassicicola 0.77 >More info 0.75 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
22 pepr1-1 Pepr2-3 +Pep2 2h -0.76 >More info -0.76 >More info WT +Pep2 2h Pep2 Original data GEO bulk
23 WT AntimycinA 3h 0.74 >More info 0.78 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
24 npr1-1 SA -0.74 >More info -0.77 >More info Col-0 SA complete seedling Original data
25 oligomycin 4 h 0.76 >More info 0.75 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
26 Laer treat paclobutrazol (PAC) 0.74 >More info 0.77 >More info Laer Control leaf discs Original data GEO bulk
27 safener treated 0.77 >More info 0.74 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
28 col-5 hrpA 12h 0.75 >More info 0.75 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
29 col-5 DC3000 12h 0.75 >More info 0.75 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
30 ataf1-1 mutant Col-0 Bgh inoculated 0.73 >More info 0.77 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
31 Col-0 under 4 days salt 0.77 >More info 0.72 >More info Col-0 under control 4 days salt treatment rosette Original data
32 P.p 10.5hai 0.76 >More info 0.73 >More info At-Control roots Original data GEO bulk
33 GST NPP1 4 h (leaf) 0.74 >More info 0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
34 HopZ1a treated 0.74 >More info 0.75 >More info col Original data GEO bulk
35 ein2-1 9 hpi A. brassicicola 0.76 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
36 low CO2 + light 0.68 >More info 0.80 >More info normal CO2 + light Original data GEO bulk
37 anac017-2 AntimycinA 3h -0.72 >More info -0.76 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
38 Laer Flg22 2h 0.72 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
39 Col ozone 3h 0.66 >More info 0.82 >More info Col clean-air 3h ozone Original data GEO bulk
40 Mutant siz1-3 (Drought) 0.76 >More info 0.71 >More info Col-0 (Drought) Original data GEO bulk
41 efr-1 +elf18 10h -0.73 >More info -0.74 >More info WT +elf18 10h elf18 Original data GEO bulk
42 sid2-1 cold -0.73 >More info -0.74 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
43 siz1-3 drought 0.76 >More info 0.71 >More info Col-0 drought Original data GEO bulk
44 Fenclorim 24hr 0.76 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
45 CMV-WT 0.73 >More info 0.73 >More info Mock-At Aerial tissues Original data GEO bulk
46 pad4-PsmES4326-24hpi -0.73 >More info -0.73 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
47 P.p 2.5hai 0.69 >More info 0.77 >More info At-Control roots Original data GEO bulk
48 upf3 0.72 >More info 0.74 >More info WT whole plant Original data GEO bulk
49 Col whole leaf 5dpi 0.69 >More info 0.77 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
50 SLWF infested 0.74 >More info 0.72 >More info SLWF uninfested rosette tissue Original data GEO bulk
51 HopZ1a treated ulp1c ulp1d 0.72 >More info 0.73 >More info col Original data GEO bulk
52 6h +Pi -0.69 >More info -0.76 >More info 6h -Pi root Original data GEO bulk
53 B.cinerea 18 h infection 0.76 >More info 0.69 >More info Mock 18 h Original data Botrytis cinerea infection
54 Botrytis cinerea 18h 0.76 >More info 0.69 >More info control 18h Original data GEO bulk
55 pepr1-1 Pepr2-3 +Pep2 10h -0.72 >More info -0.72 >More info WT +Pep2 10h Pep2 Original data GEO bulk
56 gh3.5-1D 48 hpi 0.73 >More info 0.71 >More info Col-0 uninoculated Original data GEO bulk
57 WT-SA 0.69 >More info 0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
58 eds16 whole leaf 5dpi -0.68 >More info -0.75 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
59 SCR-GR Time 1H Dex 0.65 >More info 0.78 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
60 del1-1 mutant 5d uninfected 0.72 >More info 0.71 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
61 AvrRpm1 2 h (leaf) 0.70 >More info 0.73 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
62 coi1-2 0.70 >More info 0.72 >More info Col-0 mock Whole seedling Original data GEO bulk
63 Triazolopyrimidine EC50 0.75 >More info 0.67 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
64 Elevated CO2 AMPLE N NIGHT 0.60 >More info 0.81 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
65 Primisulfuron EC50 0.75 >More info 0.66 >More info Carrier (primisulfuron) Original data GEO bulk
66 Phytoprostane A1 4 h 0.67 >More info 0.74 >More info Col-0 Original data GEO bulk
67 WT Bc inoculation 14h 0.77 >More info 0.64 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
68 Mutant gh3.5-1D (AvrRpt2) 0.68 >More info 0.73 >More info Col-0 (AvrRpt2) Original data GEO bulk
69 Laer Flg22+GA 2h 0.70 >More info 0.71 >More info Laer Control leaf discs Original data GEO bulk
70 smg5-2 0.71 >More info 0.70 >More info WT whole plant Original data GEO bulk
71 WT H2O2 3h 0.70 >More info 0.71 >More info WT water 3h 3h_H2O2 Original data GEO bulk
72 WT in -N 0.72 >More info 0.69 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
73 Col-0 C2H4 24h 0.72 >More info 0.69 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
74 Osmotic Stress 24 h (shoot) 0.73 >More info 0.67 >More info Stress mock 24 h (shoot) Original data Stress treatments
75 8hr-pH4.5 0.67 >More info 0.73 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
76 cpr5scv1 0.73 >More info 0.67 >More info WT(COL) Original data GEO bulk
77 R. solani AG2-1 0.70 >More info 0.70 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
78 Col ozone 2d 0.66 >More info 0.74 >More info Col clean-air 2d ozone Original data GEO bulk
79 Whole root - low pH 12H 0.62 >More info 0.78 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
80 WT 30μM arsenate 8 hours. 0.72 >More info 0.68 >More info WT control (not supplemented). Original data
81 hrpA 7h 0.72 >More info 0.68 >More info Mock 7h hrpA Original data GEO bulk
82 WT flg22 2h 0.71 >More info 0.69 >More info WT 0h Leaf tissue Original data GEO bulk
83 R. solani AG8 0.69 >More info 0.71 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
84 edr1 18 h powdery mildew 0.70 >More info 0.70 >More info Col-0 18 h powdery mildew Original data GEO bulk
85 Col-Luc WT 3h antimycin A 0.71 >More info 0.69 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
86 flu over-tAPX 0.65 >More info 0.75 >More info WT Col Original data GEO bulk
87 Phaseolicola 2 h (leaf) 0.65 >More info 0.74 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
88 wrky33 Bc inoculation 14h 0.78 >More info 0.61 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
89 Col0-PsmES4326-24hpi 0.78 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
90 Chitosan 3h Treatment 0.71 >More info 0.68 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
91 Col whole leaf 7dpi 0.69 >More info 0.70 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
92 Cor hrpS 10h 0.69 >More info 0.70 >More info Mock 10h Cor hrpS Original data GEO bulk
93 Cocultivation 8 hrs root 0.70 >More info 0.69 >More info Mock cocultivation 8 hrs root Root Original data
94 ice1 control 0.70 >More info 0.68 >More info WT control Original data GEO bulk
95 flu 0.66 >More info 0.72 >More info WT Col Original data GEO bulk
96 AvrRpt2 Col-0 6hpi 0.72 >More info 0.66 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
97 Nicotinamide-53hr 0.69 >More info 0.69 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
98 penta Alternaria 3dpi 0.74 >More info 0.64 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
99 Laer Flg22 1h 0.70 >More info 0.67 >More info Laer Control leaf discs Original data GEO bulk
100 Shoot -Cs 0.52 >More info 0.85 >More info Control-shoot Original data GEO bulk
101 DC3000 2 h (leaf) 0.65 >More info 0.72 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
102 Cycloheximide 3 h 0.69 >More info 0.68 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
103 LTN008-2 aza-dc 0.71 >More info 0.66 >More info LTN012-2 Mock Original data
104 hrcC 0.68 >More info 0.68 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
105 cpr5 0.67 >More info 0.69 >More info WT(COL) Original data GEO bulk
106 plant (tga2-5-6) 4h phytoprostane A1 0.69 >More info 0.67 >More info plant (tga2-5-6) 4h control Original data GEO bulk
107 Col-0-avrB-6h 0.66 >More info 0.70 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
108 WT Col-0 Bgh inoculated 0.63 >More info 0.73 >More info WT Col-0 Un-inoculated Original data GEO bulk
109 ARR22-ox (t-zeatin 3 h) 0.73 >More info 0.63 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
110 E.coli TUV86 2 fliC 7h 0.70 >More info 0.65 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
111 Nicotinamide-81hr 0.69 >More info 0.66 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
112 overexpresser LBD38 in -N -0.72 >More info -0.63 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
113 SA 0.65 >More info 0.70 >More info WT mock Whole seedling Original data GEO bulk
114 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.76 >More info 0.59 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
115 Te ozone 0.73 >More info 0.62 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
116 Elevated CO2 expanding leaf 0.62 >More info 0.73 >More info Ambient CO2 expanding leaf expanding leaf Original data
117 csn5 (csn5a-2 csn5b) light 0.70 >More info 0.65 >More info WT light Original data GEO bulk
118 Laer pretreat GA Flg22 1h 0.63 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
119 upf1 0.70 >More info 0.64 >More info WT whole plant Original data GEO bulk
120 A. thaliana-A. lyrata hybrid -0.60 >More info -0.74 >More info A. thaliana mature leaves before flowering Original data GEO bulk
121 tor mutant glucose 0.70 >More info 0.64 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
122 35S::ERF104 Flg22 4h 0.63 >More info 0.71 >More info 35S::ERF104 H2O 4h Original data GEO bulk
123 Nicotinamide-57hr 0.69 >More info 0.65 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
124 dde2-2 9 hpi A. brassicicola 0.71 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
125 seedlings protease IV 0.66 >More info 0.67 >More info seedlings nontreated control whole seedling Original data
126 gai Control 0.71 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
127 camta1/2/3 warm 0.68 >More info 0.65 >More info WT warm entire aerial part Original data GEO bulk
128 bZIP1ko mutant N+Light- 0.65 >More info 0.68 >More info WT-sib N+Light- whole plant Original data GEO bulk
129 Shoot -K 0.69 >More info 0.64 >More info Control-shoot Original data GEO bulk
130 K starvation (shoot) 0.69 >More info 0.64 >More info Ws (shoot) Original data GEO bulk
131 toc1-1-53hr 0.65 >More info 0.68 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
132 toc1-1-65hr 0.68 >More info 0.64 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
133 toc1-1-49hr 0.65 >More info 0.67 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
134 ice1 6H Cold 0.68 >More info 0.64 >More info WT 6H Cold Original data GEO bulk
135 Pto inoculated 0.67 >More info 0.65 >More info col Original data GEO bulk
136 rpoTmp(line) MLD stressed 0.64 >More info 0.68 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
137 WT-NOCO2 INFECTED 0.68 >More info 0.64 >More info WT-MOCK Original data GEO bulk
138 cpr5npr1svi1 0.65 >More info 0.67 >More info WT(COL) Original data GEO bulk
139 cpr5 0.64 >More info 0.68 >More info WT seedling Original data GEO bulk
140 camta1/3 warm 0.60 >More info 0.72 >More info WT warm entire aerial part Original data GEO bulk
141 Col-0 flu HL 3h 0.69 >More info 0.63 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
142 Cor 24h 0.60 >More info 0.72 >More info Mock 24h Cor Original data GEO bulk
143 coi1-16 ein2 sid2 ctrl -0.73 >More info -0.59 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
144 CT101 ozone 0.72 >More info 0.59 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
145 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.73 >More info 0.58 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
146 E.coli 0157 H7 7h 0.69 >More info 0.62 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
147 aox1a:rpoTmp untreated 0.62 >More info 0.69 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
148 Col-0 ozone 0.73 >More info 0.58 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
149 5-Triiodobenzoic acid3 h 0.59 >More info 0.72 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
150 8h-DC3000 avrRpm1 0.69 >More info 0.62 >More info 8h-DC3000 leaves Original data GEO bulk
151 Salt Stress 24 h (root) 0.71 >More info 0.60 >More info Stress mock 24 h (root) Original data Stress treatments
152 Leafminer locally damaged thaliana seedlings 0.68 >More info 0.62 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
153 chito-octamer 0.62 >More info 0.68 >More info Col Mock Original data GEO bulk
154 camta2/3 warm 0.62 >More info 0.68 >More info WT warm entire aerial part Original data GEO bulk
155 Laer Flg22+GA 1h 0.68 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
156 col-5 DC3000-avrRpm 4h 0.66 >More info 0.64 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
157 Laer pretreat GA+JA Flg22 0h 0.69 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
158 AsAKiin11 T2 0.58 >More info 0.72 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
159 Col-0 SA 0.61 >More info 0.69 >More info Col-0 Original data GEO bulk
160 sid2-2 9 hpi A. brassicicola 0.70 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
161 Laer pretreat GA Flg22 0h 0.70 >More info 0.59 >More info Laer pretreat water control leaf discs Original data GEO bulk
162 GO5; 8h switch to ambient CO2 concentrations; 0.58 >More info 0.71 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
163 DC3000 24h 0.64 >More info 0.65 >More info Mock 24h DC3000 Original data GEO bulk
164 SA 4mM 0.72 >More info 0.57 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
165 DC3000 7h 0.62 >More info 0.66 >More info Mock 7h DC3000 Original data GEO bulk
166 camta1/2/3 24h cold 0.64 >More info 0.64 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
167 vtc1 (II) 0.66 >More info 0.62 >More info Col (II) rosette Original data GEO bulk
168 BLM+INA 0.63 >More info 0.65 >More info CK BLM and INA seedling Original data
169 til1-1 22C 0.62 >More info 0.66 >More info Col-0 22C Original data GEO bulk
170 dicamba 0.63 >More info 0.65 >More info WT mock whole seedling Original data GEO bulk
171 shoots bhlh100/101 0uM Fe 0.70 >More info 0.58 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
172 Dark 3day ivd 0.69 >More info 0.59 >More info 0h ivd Original data
173 des1 water 0.69 >More info 0.59 >More info WT water water leaf Original data GEO bulk
174 cpr5npr1 0.67 >More info 0.60 >More info WT(COL) Original data GEO bulk
175 dor drought 0.59 >More info 0.68 >More info WT drought Original data GEO bulk
176 root stele 40 mM NaCls 0.58 >More info 0.69 >More info root stele Original data GEO bulk
177 WT flg22 1h 0.63 >More info 0.64 >More info WT 0h Leaf tissue Original data GEO bulk
178 Flagellin 4 h (leaf) 0.63 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
179 pvip1 pvip2 0.67 >More info 0.60 >More info Col-0 whole rosettes Original data GEO bulk
180 mkk1/mkk2 24h BTH rep 0.61 >More info 0.66 >More info Col-0 24h BTH rep Original data GEO bulk
181 S58-2 0.54 >More info 0.72 >More info wt Original data GEO bulk
182 sni1 0.62 >More info 0.64 >More info WT Original data GEO bulk
183 WT NAA/flg 1h 0.66 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
184 UV Stress 24 h (shoot) 0.65 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
185 inhibitor A Treated 0.56 >More info 0.70 >More info Negative Control Original data GEO bulk
186 8-DAC chr11-1chr17-1 0.68 >More info 0.58 >More info 8-DAC Col-0 leaf explants Original data
187 UV 0.71 >More info 0.55 >More info WT aerial region Original data GEO bulk
188 21h-DC3000 avrRpm1 -0.57 >More info -0.69 >More info 21h-DC3000 leaves Original data GEO bulk
189 Col-0 INA 48h 0.53 >More info 0.72 >More info Col-0 MOCK 48h Original data GEO bulk
190 Laer pretreat GA+JA Flg22 1h 0.67 >More info 0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
191 seedlings +5AC 0.67 >More info 0.58 >More info control seedlings 10-day old whole seedling Original data GEO bulk
192 WT+H2O2 0.53 >More info 0.72 >More info WT H2O2 Original data GEO bulk
193 20d after anthesis 0.70 >More info 0.55 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
194 hrpA fliC 7h 0.71 >More info 0.54 >More info Mock 7h hrpA fliC Original data GEO bulk
195 miR393 0h -0.55 >More info -0.70 >More info WT 0h Leaf tissue Original data GEO bulk
196 WT+chitooctaose 0.57 >More info 0.68 >More info WT+water chitooctaose seedlings Original data GEO bulk
197 RRE2 Chitin 0.68 >More info 0.56 >More info Chitin Original data GEO bulk
198 Leafminer damaged seedlings 0.68 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
199 +1.6 mM Tween 20 1 h. 0.56 >More info 0.68 >More info +distilled water 1 h. Original data GEO bulk
200 mil4 BTH 0.66 >More info 0.58 >More info Col BTH rosettes Original data GEO bulk
201 rosettes WT drought 0.67 >More info 0.57 >More info rosettes WT watered Original data GEO bulk
202 9 hr Hypoxia 1 hr recovery Total RNA 0.62 >More info 0.62 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
203 Mature callus 0.61 >More info 0.63 >More info Young callus hypocotyls Original data GEO bulk
204 RPL18 TuMV inoculated total RNA 0.60 >More info 0.64 >More info mock inoculated total RNA PO Original data GEO bulk
205 (Col-0)+200 uM As 0.63 >More info 0.61 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
206 P.syringae AvrRpt2 4 h (leaf) 0.63 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
207 edr1 36 h powdery mildew 0.67 >More info 0.57 >More info Col-0 36 h powdery mildew Original data GEO bulk
208 GST 4 h (leaf) 0.59 >More info 0.65 >More info Mock 4 h (leaf) Original data Elicitor treatments
209 atgsnor1-1 -0.52 >More info -0.71 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
210 pmr5 pmr6 0.55 >More info 0.68 >More info Col-0 Original data GEO bulk
211 Col whole leaf 5 dpi 0.55 >More info 0.68 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
212 cell culture 4 h phytoprostane A1 0.56 >More info 0.67 >More info cell culture 4 h control Original data GEO bulk
213 Nicotinamide-65hr 0.67 >More info 0.56 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
214 4d red light grown hmr-5 seedlings 0.62 >More info 0.61 >More info 4d red light grown WT(Col-0) seedlings Original data
215 Col-0 V. longisporum-inoculated 48 hpi 0.54 >More info 0.68 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
216 bio4-1 mutant watered00µM biotin leaves -0.56 >More info -0.66 >More info bio4-1 mutant leaves leaves Original data GEO bulk
217 Nicotinamide-85hr 0.64 >More info 0.58 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
218 Mutant siz1-3 0.58 >More info 0.64 >More info Col-0 Original data GEO bulk
219 C24 ozone 0.70 >More info 0.52 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
220 siz1-3 control 0.58 >More info 0.64 >More info Col-0 control Original data GEO bulk
221 Col whole leaf amplified 5 dpi 0.57 >More info 0.65 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
222 Leaf wounded 0.51 >More info 0.71 >More info Leaf control vegetative leaf Original data GEO bulk
223 GSH 0.57 >More info 0.65 >More info control GSH treated seedlings Original data GEO bulk
224 WT seedlings MV 0.61 >More info 0.60 >More info WT seedlings control Seedlings Original data GEO bulk
225 chito-tetramer 0.53 >More info 0.68 >More info Col Mock Original data GEO bulk
226 sfr6 drought -0.53 >More info -0.68 >More info WT drought All aerial tissue Original data GEO bulk
227 WT (Col) glucose -0.55 >More info -0.66 >More info WT (Col) glucose seedlings Original data GEO bulk
228 oas-a1.1 Cd 18h 0.54 >More info 0.67 >More info Cd 18h root Root Original data GEO bulk
229 AFB1 flg22 2h 0.63 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
230 Dex-rga(delta17) 2h GA4+DEX -0.63 >More info -0.58 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
231 smg7b-1 0.56 >More info 0.65 >More info WT whole plant Original data GEO bulk
232 OE WRKY63.3 high light 0.62 >More info 0.59 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
233 Nicotinamide-73hr 0.63 >More info 0.58 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
234 Dex-rga(delta17) 4h GA4+DEX -0.64 >More info -0.56 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
235 Col-0 low oxygen 0.56 >More info 0.64 >More info Col-0 control low oxygen root Original data GEO bulk
236 Light 3day wt -0.54 >More info -0.66 >More info 0h wt Original data
237 arf2 mock 0.58 >More info 0.62 >More info Col mock Original data GEO bulk
238 anac017-1 H2O2 3h -0.63 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
239 downy mildew cotyledons late stage 0.62 >More info 0.58 >More info mock inoculated Cotyledons Original data GEO bulk
240 Mutant arf2 (etiol) 0.58 >More info 0.62 >More info Col (etiol) Original data GEO bulk
241 cop1 Seedling BL 0.57 >More info 0.63 >More info WT Seedling BL Original data GEO bulk
242 coi1-16 ein2 sid2 ozone 0.72 >More info 0.48 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
243 Laer pretreat GA+JA Flg22 2h 0.63 >More info 0.57 >More info Laer pretreat water control leaf discs Original data GEO bulk
244 ced1 -0.63 >More info -0.57 >More info WT PEG 6hr seedlings Original data GEO bulk
245 erf104-ko Flg22 4h 0.47 >More info 0.73 >More info erf104-ko H2O 4h Original data GEO bulk
246 Nicotinamide-61hr 0.67 >More info 0.52 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
247 WT powdery mildew 0.56 >More info 0.63 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
248 WT chitooctaose 0.61 >More info 0.58 >More info WT water Original data GEO bulk
249 nia1nia2 0.60 >More info 0.59 >More info Col-0 whole seedlings Original data GEO bulk
250 9 hr Hypoxia 1 hr recovery IP RNA 0.61 >More info 0.58 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
251 root endodermis and quiescent center 40 mM NaCl 0.55 >More info 0.64 >More info root endodermis and quiescent center Original data GEO bulk
252 PAHs stress 0.56 >More info 0.63 >More info exp control phenanthrene whole plants Original data GEO bulk
253 hira-root -0.49 >More info -0.70 >More info WT-root root Original data
254 CeO2 germinant -0.48 >More info -0.71 >More info Millipore Water germinant CeO2 seedling Original data
255 camta3-2 0.53 >More info 0.65 >More info WT Original data GEO bulk
256 RPL18 TuMV inoculated polysomal RNA 0.55 >More info 0.63 >More info mock inoculated polysomal RNA PO Original data GEO bulk
257 miR393 flg22 2h 0.52 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
258 JA 0.52 >More info 0.66 >More info Col-0 mock Whole seedling Original data GEO bulk
259 Elevated CO2 AMPLE N DAY 0.56 >More info 0.62 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
260 9 hr Hypoxia IP RNA 0.58 >More info 0.60 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
261 WT 2-4h Xanthomonas 0.61 >More info 0.57 >More info WT T0 Original data GEO bulk
262 cat2-2; 8h switch to ambient CO2 concentrations; 0.58 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
263 aba3-1 0.46 >More info 0.72 >More info wt Original data GEO bulk
264 35S::PI ap3-3 35S::AP-GR +DEX 0.41 >More info 0.77 >More info 0hr DEX Original data GEO bulk
265 csn3-1 light 0.61 >More info 0.56 >More info WT light Original data GEO bulk
266 ice1 3H Cold 0.59 >More info 0.58 >More info WT 3H Cold Original data GEO bulk
267 Col BTH 0.50 >More info 0.67 >More info Col rosettes Original data GEO bulk
268 (Col-0)+100 uM As 0.55 >More info 0.62 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
269 9 hr Hypoxia Total RNA 0.58 >More info 0.59 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
270 Octopus overexpressor 35SDYG25 0.53 >More info 0.64 >More info WS Original data GEO bulk
271 AFB1 flg22 1h 0.56 >More info 0.61 >More info WT 0h Leaf tissue Original data GEO bulk
272 WT +elf18 2h 0.61 >More info 0.55 >More info WT untreated elf18 Original data GEO bulk
273 overexpresser LBD37 in -N -0.62 >More info -0.54 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
274 rcf1-1 cold 24h 0.61 >More info 0.55 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
275 toc1-1-77hr 0.66 >More info 0.50 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
276 embryo paclobutrazol 0.61 >More info 0.55 >More info embryo-control paclobutrazol embryo Original data GEO bulk
277 CMV-A2b mutant 0.66 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
278 Nicotinamide-69hr 0.62 >More info 0.54 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
279 aox1a(line) MLD stressed 0.60 >More info 0.56 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
280 mpk6-ko Flg22 4h 0.50 >More info 0.66 >More info mpk6-ko H2O 4h Original data GEO bulk
281 myb3 myb3r4d 0.52 >More info 0.64 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
282 CLO 4mM 0.70 >More info 0.46 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
283 ice1 24H Cold 0.60 >More info 0.55 >More info WT 24H Cold Original data GEO bulk
284 low CO2 + dark 0.53 >More info 0.62 >More info normal CO2 + light Original data GEO bulk
285 toc1-1-57hr 0.53 >More info 0.62 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
286 21h-DC3000 hrpA -0.48 >More info -0.67 >More info 21h-DC3000 leaves Original data GEO bulk
287 ABA SA 24h 0.43 >More info 0.72 >More info EtOH 24h 24hr Original data GEO bulk
288 whole roots 140 mM NaCl 1 hour 0.53 >More info 0.61 >More info whole roots standard Original data GEO bulk
289 WT +elf18 10h 0.59 >More info 0.55 >More info WT untreated elf18 Original data GEO bulk
290 eds16 whole leaf 6hpi -0.50 >More info -0.64 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
291 (Ws-2)+100 uM As 0.60 >More info 0.54 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
292 ani1 T16 -0.51 >More info -0.63 >More info WT T16 root tissue Original data GEO bulk
293 WT Shoot-Pi 0.58 >More info 0.56 >More info WT Shoot+Pi shoots Original data GEO bulk
294 Osmotic Stress 24 h (root) 0.60 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
295 Prohexadione 12 h 0.40 >More info 0.74 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
296 plant (tga2-5-6) 4h OPDA 0.57 >More info 0.57 >More info plant (tga2-5-6) 4h control Original data GEO bulk
297 ulp1c ulp1d +Pto 0.57 >More info 0.57 >More info ulp1c ulp1d mock Original data GEO bulk
298 IAA/inhibitor A Treated 0.54 >More info 0.59 >More info IAA Treated Original data GEO bulk
299 stn7-1 -0.51 >More info -0.62 >More info Col-0 rosette leaves Original data GEO bulk
300 miR393 flg22 1h 0.51 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
301 detached inflorescences 24h 0.56 >More info 0.57 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
302 ckh1 CK200 0.52 >More info 0.61 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
303 Nicotinamide-89hr 0.62 >More info 0.51 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
304 lht1 PstDC3000 48h 0.57 >More info 0.56 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
305 pmr4-1 powdery mildew 0.43 >More info 0.70 >More info WT powdery mildew uninoculated Original data GEO bulk
306 WT NAA/flg 2h 0.57 >More info 0.55 >More info WT 0h Leaf tissue Original data GEO bulk
307 SCR-GR Time 12H Dex 0.54 >More info 0.58 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
308 vte2-1 3d vernalization 0.56 >More info 0.56 >More info WT 3d vernalization Original data GEO bulk
309 CAX1/CAX3 mutant 0.56 >More info 0.56 >More info Col whole plant Original data GEO bulk
310 15m.KCl 0.49 >More info 0.63 >More info To. KCl 14 day old Roots Original data GEO bulk
311 Pst-DC3000(avrRpm1)-4hpi 0.56 >More info 0.55 >More info Pst-DC3000-4hpi Original data GEO bulk
312 Col-0 48 hpi 0.56 >More info 0.55 >More info Col-0 uninoculated Original data GEO bulk
313 Compost 0.55 >More info 0.56 >More info Perlite Compost Original data GEO bulk
314 NJ15 0.45 >More info 0.66 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
315 Laer pretreat GA Flg22 2h 0.60 >More info 0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
316 npr1-PsmES4326-24hpi -0.50 >More info -0.61 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
317 OH1 0.52 >More info 0.59 >More info Col-0 leaves Original data GEO bulk
318 Roots Cd -0.49 >More info -0.62 >More info Roots control Cd Root Original data GEO bulk
319 msh1 albino 0.56 >More info 0.54 >More info WT aerial part Original data GEO bulk
320 plant (Col-0) 4h OPDA 0.55 >More info 0.55 >More info plant (Col-0) 4h control Original data GEO bulk
321 ein5-1 ski2-3 0.61 >More info 0.49 >More info Col-0 aerial tissue Original data
322 vtc2 (I) 0.55 >More info 0.55 >More info Col (I) rosette Original data GEO bulk
323 IRP1-OE-Fe--shoot 0.61 >More info 0.49 >More info COL-0-Fe--shoot shoot Original data
324 Col-O high light 0.54 >More info 0.56 >More info Col-O bule light Original data GEO bulk
325 OPDA 4 h 0.55 >More info 0.55 >More info Col-0 Original data GEO bulk
326 WT light -0.63 >More info -0.47 >More info WT dark Original data GEO bulk
327 whole roots -Fe 48 hour 0.51 >More info 0.59 >More info whole roots standard Original data GEO bulk
328 Mutant NahG(leaf) -0.52 >More info -0.58 >More info Col-0 (leaf) Original data GEO bulk
329 embryo ABA 0.60 >More info 0.50 >More info embryo-control ABA embryo Original data GEO bulk
330 Salicylic Acid 3 h 0.44 >More info 0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
331 gpa1 -ABA GC -0.47 >More info -0.63 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
332 ORS1 induced 0.46 >More info 0.64 >More info mock-induced rosette leaves Original data GEO bulk
333 oligomycin 1 h 0.43 >More info 0.67 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
334 S15-118 0.46 >More info 0.64 >More info wt Original data GEO bulk
335 atmyc2 cop1 Seedling BL 0.49 >More info 0.61 >More info WT Seedling BL Original data GEO bulk
336 ceh1 mutant 0.55 >More info 0.54 >More info Parent line Original data
337 4h decapitation -0.42 >More info -0.67 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
338 rdr6-15 -0.52 >More info -0.57 >More info Col-0 Original data GEO bulk
339 abi4 vtc2 (I) 0.57 >More info 0.52 >More info Col (I) rosette Original data GEO bulk
340 Seedling-HeatStressed TOTALmRNA 0.57 >More info 0.52 >More info Seedling-control TOTALmRNA seedling Original data
341 Lipopolysaccaride4 h (leaf) 0.58 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
342 Heat and anoxia 0.47 >More info 0.62 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
343 Col-0 SA 0.47 >More info 0.62 >More info Col-0 water complete seedling Original data
344 BLM 0.52 >More info 0.56 >More info CK BLM seedling Original data
345 2 hr Hypoxia Total RNA 0.55 >More info 0.53 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
346 WT +Pep2 2h 0.73 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
347 arf2 brz -0.50 >More info -0.58 >More info arf2 mock Original data GEO bulk
348 mkk1/mkk2 control rep 0.47 >More info 0.61 >More info Col-0 Time 0 rep Original data GEO bulk
349 lht1 untreated 0.48 >More info 0.60 >More info WT untreated untreated leaf Original data GEO bulk
350 cs26 short-day -0.47 >More info -0.61 >More info Leaves-WT-SD leaf Original data GEO bulk
351 root epidermis and lateral root cap -S -0.45 >More info -0.63 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
352 ani1 T0.5 -0.52 >More info -0.55 >More info WT T0.5 root tissue Original data GEO bulk
353 penta Control 0.65 >More info 0.42 >More info Laer Control leaf discs Original data GEO bulk
354 rosette leaves fdh 0.52 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
355 24h SL WT -0.56 >More info -0.51 >More info 0 h WT seed Original data
356 atmospheric CO2 low Mg shoot 0.61 >More info 0.46 >More info atmospheric CO2 normal Mg shoot Shoot Original data
357 sid2 -0.50 >More info -0.57 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
358 9m.KCl 0.49 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
359 WT drought 0.47 >More info 0.60 >More info WT control All aerial tissue Original data GEO bulk
360 seedling -S Exp 0.47 >More info 0.60 >More info seedling FN Exp seedling Original data
361 irradiated leaf (WT 1d) 0.59 >More info 0.47 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
362 whole roots -Fe 72 hour 0.52 >More info 0.54 >More info whole roots standard Original data GEO bulk
363 Nicotinamide-49hr 0.60 >More info 0.46 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
364 WT 1wk -P 0.64 >More info 0.42 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
365 Fe starvation 72 h 0.52 >More info 0.54 >More info Control Original data GEO bulk
366 csn4-1 dark 0.60 >More info 0.46 >More info WT light Original data GEO bulk
367 ABA JA 24h 0.30 >More info 0.76 >More info EtOH 24h 24hr Original data GEO bulk
368 Whole root - low pH 24H 0.43 >More info 0.63 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
369 seedling h S Exp -0.40 >More info -0.66 >More info seedling -S Exp seedling Original data
370 Elevated CO2 fully expanded leaf 0.67 >More info 0.38 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
371 dor control 0.59 >More info 0.46 >More info WT control Original data GEO bulk
372 seedling 1.5h after Gamma atm-1 0.59 >More info 0.46 >More info seedling day 1 unirradiated atm-1 1.5h Original data
373 rosette Dark Wounded 0.48 >More info 0.57 >More info rosette Dark Control Original data GEO bulk
374 rosettes myoox drought 0.63 >More info 0.41 >More info rosettes myoox watered Original data GEO bulk
375 17 0h total -0.52 >More info -0.52 >More info 27 0h total whole seedlings floating on MS medium Original data
376 35:SUB1A 0.55 >More info 0.49 >More info WT whole seedling Original data GEO bulk
377 WT roots - Fe 0.68 >More info 0.36 >More info WT roots + Fe Roots Original data GEO bulk
378 atmospheric CO2 high Mg shoot 0.58 >More info 0.45 >More info atmospheric CO2 normal Mg shoot Shoot Original data
379 Root dark control 24h 0.51 >More info 0.52 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
380 aox1a(line) untreated -0.58 >More info -0.45 >More info WT(Col0) untreated (control aox1a) leaf Original data
381 amiR-tor induced 6d 0.53 >More info 0.50 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
382 Laer pretreat JA Flg22 2h 0.62 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
383 eds16 whole leaf 0h UI -0.34 >More info -0.69 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
384 gun1gun5 far-red pretreated -0.39 >More info -0.64 >More info WT far-red pretreated Original data GEO bulk
385 sfr3 cold 0.47 >More info 0.56 >More info WT cold All aerial tissue Original data GEO bulk
386 root protoplasts 40 mM NaCl 0.48 >More info 0.55 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
387 root protophloem 40 mM NaCl 0.46 >More info 0.57 >More info root protophloem Original data GEO bulk
388 cngc4 0.53 >More info 0.49 >More info Ws-2 Seedlings Original data GEO bulk
389 gh3.5D uninoculated -0.52 >More info -0.50 >More info Col-0 48 hpi Original data GEO bulk
390 pif4pif5 mut 1h FR -0.46 >More info -0.56 >More info WT 1h FR Original data GEO bulk
391 dorn1-1 Root 100 mM ATP 30 min -0.35 >More info -0.67 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
392 Laer pretreat JA Flg22 1h 0.62 >More info 0.39 >More info Laer pretreat water control leaf discs Original data GEO bulk
393 Col-0 2HS 0.50 >More info 0.51 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
394 Imidazolinone EC50 0.66 >More info 0.35 >More info Carrier (Imidazolinone) Original data GEO bulk
395 fus3-3 12 DAF Seed -0.54 >More info -0.47 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
396 apk1 apk2 0.55 >More info 0.46 >More info Col0-control whole rosette Original data GEO bulk
397 abi4-102 (II) 0.53 >More info 0.48 >More info Col (II) rosette Original data GEO bulk
398 24h SL Attim 17-1 1 -0.52 >More info -0.49 >More info 0 h Attim 17-1 1 seed Original data
399 Mutant coi1(leaf) -0.56 >More info -0.45 >More info Col-0 (leaf) Original data GEO bulk
400 WT 24H Cold 0.51 >More info 0.50 >More info WT control Original data GEO bulk
401 GST-overexpression seedlings control 0.66 >More info 0.35 >More info WT seedlings control Seedlings Original data
402 vte2 leaves 48h LT 0.61 >More info 0.40 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
403 phyB mutant 22C 10hrs -0.50 >More info -0.51 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
404 K starvation (root) 0.44 >More info 0.57 >More info Ws (root) Original data GEO bulk
405 Col laser microdissected 5 dpi 0.43 >More info 0.58 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
406 ein2-PsmES4326-24hpi -0.39 >More info -0.62 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
407 dense canopy 0.47 >More info 0.54 >More info single (control) petiole Original data GEO bulk
408 ISOXABEN -0.46 >More info -0.55 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
409 Root -K 0.44 >More info 0.57 >More info Control-root Original data GEO bulk
410 whole roots 140 mM NaCl 30 minutes 0.43 >More info 0.58 >More info whole roots standard Original data GEO bulk
411 pad2-PsmES4326-24hpi -0.51 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
412 col-5 hrpA 2h 0.52 >More info 0.48 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
413 D2O 0.58 >More info 0.42 >More info H2O seedling Original data GEO bulk
414 cov1 cov2 stem Top -0.63 >More info -0.37 >More info WT stem Top stem Top Original data GEO bulk
415 Col-0 Flg22 4h 0.44 >More info 0.56 >More info Col-0 H2O 4h Original data GEO bulk
416 gpa1 +ABA GC -0.47 >More info -0.53 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
417 SA 3h 0.30 >More info 0.70 >More info EtOH 3h 3hr Original data GEO bulk
418 pmr5 0.39 >More info 0.61 >More info Col-0 Original data GEO bulk
419 35S:RPS4 eds1-2 2h -0.38 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
420 AFB1 0h 0.62 >More info 0.37 >More info Col 0h Leaf Original data GEO bulk
421 Atwrky63 -0.63 >More info -0.36 >More info Col0 none leaf Original data GEO bulk
422 ataf1-1 mutant Col-0 Un-inoculated -0.57 >More info -0.42 >More info WT Col-0 Un-inoculated Original data GEO bulk
423 Nicotinamide-93hr 0.58 >More info 0.41 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
424 24h +Pi -0.53 >More info -0.46 >More info 24h -Pi root Original data GEO bulk
425 WT cold 0.54 >More info 0.45 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
426 Seedling-HeatStressed POLYSOMESmRNA 0.54 >More info 0.45 >More info Seedling-control POLYSOMESmRNA seedling Original data
427 rosette Light Wounded 0.43 >More info 0.56 >More info rosette Light Control Original data GEO bulk
428 Whole root - low pH 6H 0.44 >More info 0.55 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
429 cat2-hCO2 -0.70 >More info -0.28 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
430 phr1 Root-Pi 0.54 >More info 0.44 >More info WT Root+Pi roots Original data GEO bulk
431 Col-0 INA 6d 0.52 >More info 0.46 >More info Col-0 MOCK 6d Original data GEO bulk
432 bio4-1 mutant leaves 0.54 >More info 0.44 >More info WT leaves leaves Original data GEO bulk
433 spch 0.52 >More info 0.46 >More info Col-0 WT whole seedling Original data GEO bulk
434 plant (Col-0) 4h phytoprostane A1 0.47 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
435 npr1-3 DCA 48h 0.43 >More info 0.55 >More info npr1-3 MOCK 48h Original data GEO bulk
436 HARAP aerobic -0.43 >More info -0.55 >More info WT aerobic aerobic Original data GEO bulk
437 msh1 stunt 0.47 >More info 0.51 >More info WT Col-0 above ground part of plant Original data GEO bulk
438 bHLH122 ox -0.41 >More info -0.57 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
439 cop1 Seedling BL+ABA 0.45 >More info 0.53 >More info WT Seedling BL+ABA Original data GEO bulk
440 pho1 0.59 >More info 0.38 >More info Col2WT Original data GEO bulk
441 WT no Pi 0.58 >More info 0.39 >More info WT complete seedlings Original data
442 aerial organ callus inducing medium 48 h 0.52 >More info 0.45 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
443 ASL9-ox -0.53 >More info -0.44 >More info WT aerial parts of seedlings Original data GEO bulk
444 bak1-3 +Pep2 2h 0.41 >More info 0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
445 Ambient CO2 leaf primordia -0.60 >More info -0.36 >More info Control for tissue data leaf primordia Original data
446 Time-0 chr11-1chr17-1 -0.50 >More info -0.46 >More info Time-0 Col-0 leaf explants Original data
447 Myzus persicae saliva 0.51 >More info 0.45 >More info Control Original data GEO bulk
448 HSP90 Reduced RNAi-A3 0.50 >More info 0.46 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
449 aphid saliva treated 0.51 >More info 0.45 >More info control aphid saliva treated leaves Original data GEO bulk
450 Wounding Stress3 h (shoot) 0.50 >More info 0.46 >More info Stress mock 3 h (shoot) Original data Stress treatments
451 DC3000 hrcC 2 h (leaf) 0.42 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
452 npr1 sni1 ssn2 -0.44 >More info -0.52 >More info npr1 sni1 water water seedling Original data GEO bulk
453 whole roots 140 mM NaCl 4 hour 0.41 >More info 0.55 >More info whole roots standard Original data GEO bulk
454 ABA SA 3h 0.40 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
455 Root -Cs 0.39 >More info 0.56 >More info Control-root Original data GEO bulk
456 Col upon hypoxia 6 hrs 0.54 >More info 0.41 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
457 Col-0-3h IAA 0.53 >More info 0.42 >More info Col-0-0h IAA whole plant Original data GEO bulk
458 pnp1-1 1wk +P 0.51 >More info 0.44 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
459 abi3-6 16 DAF Seed -0.50 >More info -0.45 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
460 sicy-192 gun1-101 cotyledons 0.50 >More info 0.45 >More info WT cotyledons cotyledons Original data
461 Col whole leaf 3dpi 0.44 >More info 0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
462 atgsnor1-1-avrB-6h 0.43 >More info 0.52 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
463 edr1 0 h powdery mildew 0.44 >More info 0.51 >More info Col-0 0 h powdery mildew Original data GEO bulk
464 myb50 cork -0.42 >More info -0.53 >More info wt cork cork Original data GEO bulk
465 bbx24 in Simulated Shade -0.42 >More info -0.53 >More info WT in simulated shade shade seedling Original data
466 P35S:rGRF3 0.55 >More info 0.39 >More info WS Original data GEO bulk
467 Selenate (root) 0.39 >More info 0.55 >More info Ws (root) Original data GEO bulk
468 Got7 UV 0.40 >More info 0.54 >More info Got7 mock UV seedling Original data
469 TA induced 0.40 >More info 0.54 >More info Methanol TA Suspension cells Original data GEO bulk
470 Root Selenate 0.39 >More info 0.55 >More info Root control 40 micromolar selenate Root Original data GEO bulk
471 pnp1-1 3h +P 0.50 >More info 0.44 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
472 seedling 3h after Gamma WT 0.50 >More info 0.44 >More info seedling day 1 unirradiated WT 3h Original data
473 Uniconazole 12 h 0.51 >More info 0.43 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
474 root epidermis and lateral root cap 40 mM NaCl 0.43 >More info 0.51 >More info root epidermis and lateral root cap Original data GEO bulk
475 PNO8 3 h 0.38 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
476 sex1-3 0.37 >More info 0.56 >More info Col-WT leaves Original data GEO bulk
477 iae1 -0.37 >More info -0.56 >More info B179 Original data GEO bulk
478 Salt Stress 24 h (shoot) 0.51 >More info 0.42 >More info Stress mock 24 h (shoot) Original data Stress treatments
479 Mutant axr3-1 0.33 >More info 0.60 >More info Col Original data GEO bulk
480 Selenate (shoot) 0.43 >More info 0.50 >More info Ws (shoot) Original data GEO bulk
481 Col-0 +ABA LF 0.43 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
482 Shoot Selenate 0.43 >More info 0.50 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
483 Rose Bengal 0.5 uM 0.32 >More info 0.61 >More info Control RB and PER Rose Bengal Original data
484 WT 30μM phosphate 8 hours. -0.33 >More info -0.60 >More info WT control (not supplemented). Original data
485 shoot-10 μM DEX- 6 hr 0.42 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
486 SHR-GR Time 1H Dex 0.54 >More info 0.38 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
487 seedling 6h after HZE WT 0.53 >More info 0.39 >More info seedling day 1 unirradiated WT 6h Original data
488 GRX-overexpression seedlings control 0.53 >More info 0.39 >More info WT seedlings control Seedlings Original data GEO bulk
489 sps1 -0.54 >More info -0.38 >More info WT seedling Original data GEO bulk
490 toc1-1-85hr 0.26 >More info 0.66 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
491 low water potential 0.51 >More info 0.41 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
492 IAA7mII over-expressor IAA Treated 0.23 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
493 amiRAP aerobic -0.29 >More info -0.63 >More info WT aerobic aerobic Original data GEO bulk
494 bZIP1ko mutant N+Light+ 0.53 >More info 0.38 >More info WT-sib N+Light+ whole plant Original data GEO bulk
495 Col-0 DCA 48h 0.27 >More info 0.64 >More info Col-0 MOCK 48h Original data GEO bulk
496 Cold Stress 24 h (root) 0.50 >More info 0.41 >More info Stress mock 24 h (root) Original data Stress treatments
497 mkk1 control rep -0.41 >More info -0.50 >More info Col-0 Time 0 rep Original data GEO bulk
498 eds16 whole leaf 7dpi -0.31 >More info -0.60 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
499 eds16 whole leaf 3dpi -0.33 >More info -0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
500 Full C2 T2 0.41 >More info 0.50 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
501 WT 3H Cold 0.34 >More info 0.56 >More info WT control Original data GEO bulk
502 OE-HRA1 2HS  0.55 >More info 0.35 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
503 Col leaves 48h LT 0.55 >More info 0.35 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
504 MIL4 ox BTH 0.50 >More info 0.40 >More info Col BTH Original data GEO bulk
505 SA 24h 0.26 >More info 0.64 >More info EtOH 24h 24hr Original data GEO bulk
506 root longitudinal zone-1 pH 4.6 0.40 >More info 0.50 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
507 Tsu -Fe 48h Shoots 0.37 >More info 0.53 >More info Tsu +Fe 24h Shoots Original data GEO bulk
508 irradiated leaf (cmt 1d) 0.59 >More info 0.31 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
509 WT cotyledons -0.56 >More info -0.33 >More info Control for tissue data cotyledons Original data
510 npr1 sni1 brca2a SA -0.34 >More info -0.55 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
511 1h +Pi -0.33 >More info -0.56 >More info 1h -Pi root Original data GEO bulk
512 cov1 cov2 stem Base 0.62 >More info 0.27 >More info WT stem Base stem Base Original data GEO bulk
513 Dark 6h ivd 0.50 >More info 0.39 >More info 0h ivd Original data
514 ABA 24h 0.36 >More info 0.53 >More info EtOH 24h 24hr Original data GEO bulk
515 scrm-D 0.39 >More info 0.50 >More info Col-0 WT whole seedling Original data GEO bulk
516 35S::MBF1c 0.28 >More info 0.61 >More info control Original data GEO bulk
517 aox1a:rpoTmp MLD stressed -0.36 >More info -0.53 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
518 OE WRKY40.4 -0.60 >More info -0.29 >More info OE WRKY40.4 none leaf Original data GEO bulk
519 Shoot apex vegetative -0.56 >More info -0.32 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
520 eds16 whole leaf 7d UI -0.32 >More info -0.56 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
521 wavy 0.34 >More info 0.54 >More info WT Original data GEO bulk
522 Mutant cry1 (High Light) -0.50 >More info -0.38 >More info Col-0 (High Light) Original data GEO bulk
523 iron minus 0 h 0.51 >More info 0.37 >More info iron +0 h root Original data GEO bulk
524 OE-HRA1 NS  0.51 >More info 0.37 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
525 cry1 high light -0.50 >More info -0.38 >More info Col-O high light Original data GEO bulk
526 roottip hypoxia total 0.36 >More info 0.52 >More info roottip control total Original data GEO bulk
527 GO5; 0h switch to ambient CO2 concentrations; -0.59 >More info -0.29 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
528 Shoot apex transition (before bolting) -0.58 >More info -0.30 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
529 IAA/inhibitor B Treated 0.19 >More info 0.69 >More info IAA Treated Original data GEO bulk
530 SHR-GR Time 12H Dex -0.30 >More info -0.58 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
531 Anoxia 0.30 >More info 0.58 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
532 GA 0.32 >More info 0.55 >More info none GA Rosette Original data GEO bulk
533 Whole root - low pH 3H 0.33 >More info 0.54 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
534 OE WRKY40.4 high light 0.33 >More info 0.54 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
535 penta Pst DC3000 12hpi 0.50 >More info 0.37 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
536 miR 0h 0.52 >More info 0.35 >More info Col 0h Leaf Original data GEO bulk
537 Glyphosate EC50 0.58 >More info 0.29 >More info Carrier (Glyphosate) Original data GEO bulk
538 ddm1-2 -0.56 >More info -0.30 >More info Col-0 plant inflorescence Original data
539 agb1 gpa1 -ABA GC -0.34 >More info -0.52 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
540 dcl3-1 0.32 >More info 0.54 >More info Col-0 Original data GEO bulk
541 ABA JA 3h 0.31 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
542 gun1-1 -lincomycin -0.50 >More info -0.36 >More info Col-0 -lincomycin Original data GEO bulk
543 ABA 3 h 0.35 >More info 0.51 >More info Mock 3 h Original data Basic hormone treatment of seedlings
544 Protoplast Induced 0.26 >More info 0.60 >More info Uninduced Original data GEO bulk
545 root longitudinal zone-4 NaCl 0.27 >More info 0.59 >More info root longitudinal zone-4 Original data GEO bulk
546 AtMYB30-ox 2-4h Xanthomonas 0.54 >More info 0.31 >More info WT 2-4h Xanthomonas Original data GEO bulk
547 Apex 14DAS -0.55 >More info -0.30 >More info Control for tissue data Original data GEO bulk
548 petiole in D 0.51 >More info 0.34 >More info petiole in WL petioles Original data GEO bulk
549 TaFLS overexpression line (OE2) -0.63 >More info -0.22 >More info Col-0 Rosette leaves Original data
550 RRE1 Chitin 0.50 >More info 0.34 >More info Chitin Original data GEO bulk
551 Shoot apex vegetative &Young leaves -0.53 >More info -0.31 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
552 dcl2-1 0.33 >More info 0.51 >More info Col-0 Original data GEO bulk
553 Lip0 UV 0.60 >More info 0.24 >More info Lip0 mock UV seedling Original data
554 anac017-2 H2O2 3h -0.59 >More info -0.25 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
555 12m.KCl 0.26 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
556 phyB Rc50 0.51 >More info 0.32 >More info WT(Ler) Rc50 Original data GEO bulk
557 col-5 hrpA 4h 0.33 >More info 0.50 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
558 AsAKiin11 T1 0.33 >More info 0.50 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
559 npr1 sni1 SA 0.26 >More info 0.57 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
560 del1-1 5dpi 0.63 >More info 0.19 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
561 A. thaliana-A. halleri hybrid -0.50 >More info -0.32 >More info A. thaliana mature leaves before flowering Original data GEO bulk
562 tfl1-1-16ºC 0.31 >More info 0.51 >More info WT-16ºC Original data GEO bulk
563 mbd6 mutant thaliana 10-day-old seedling 0.50 >More info 0.31 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
564 albino Ds13-2198-1 -0.54 >More info -0.27 >More info control Original data GEO bulk
565 FLIGHT TAGESB plate6 ROOTS 0.24 >More info 0.57 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
566 Bay-0-30min IAA 0.55 >More info 0.25 >More info Bay-0-0h IAA whole plant Original data GEO bulk
567 psae1-3 stn7-1 0.51 >More info 0.29 >More info WS rosette leaves Original data GEO bulk
568 Flower (stage12) -0.53 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
569 WT resupplied Pi 4h 0.50 >More info 0.30 >More info WT complete seedlings Original data
570 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.55 >More info -0.25 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
571 Oxidative Stress 3 h (root) -0.25 >More info -0.55 >More info Stress mock 3 h (root) Original data Stress treatments
572 agb1 -ABA LF 0.24 >More info 0.56 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
573 E.orontii Infection 3 day 0.23 >More info 0.57 >More info Uninfection 3 day Original data Elicitor treatments
574 toc1-1-73hr 0.22 >More info 0.58 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
575 nas4x roots - Fe -0.52 >More info -0.27 >More info WT roots - Fe Roots Original data GEO bulk
576 seed germinating in countinuous light 48 h SL -0.55 >More info -0.24 >More info Control for tissue data seed Original data GEO bulk
577 root longitudinal zone-4 pH 4.6 0.25 >More info 0.54 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
578 SA Treated 0.71 >More info 0.08 >More info Water Original data GEO bulk
579 light -0.60 >More info -0.18 >More info dark light seedling Original data GEO bulk
580 C24 UV1 -0.58 >More info -0.20 >More info C24 mock UV seedling Original data
581 inhibitor B Treated 0.16 >More info 0.62 >More info Negative Control Original data GEO bulk
582 siliques AtHb1 control 0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
583 Col-0 24hpi A. brassicicola 0.75 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
584 MPK6 ox Shoot Hypoxia 0.62 >More info 0.15 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
585 Al treated 0.22 >More info 0.55 >More info control Original data GEO bulk
586 Apex 5DAS -0.50 >More info -0.26 >More info Control for tissue data Original data GEO bulk
587 Apex mir-3TCP 14DAS -0.21 >More info -0.55 >More info Apex Col 14DAS Original data GEO bulk
588 OE WRKY63.3 0.26 >More info 0.50 >More info OE WRKY40.4 none leaf Original data GEO bulk
589 Col-0 mbs1-1 HL 3h -0.26 >More info -0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
590 Mutant axr3-1 (IAA) 0.10 >More info 0.65 >More info Col (IAA) Original data GEO bulk
591 mbd4 mutant thaliana 10-day-old seedling 0.52 >More info 0.22 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
592 chl1-9 10mM NH4NO3 -0.24 >More info -0.50 >More info col 10mM NH4NO3 Root Original data
593 3x(p) 0.14 >More info 0.60 >More info 2x two week old seedlings Original data
594 INA 0.19 >More info 0.54 >More info CK INA seedling Original data
595 Col-0 (t-zeatin 3 h) -0.16 >More info -0.56 >More info Col-0 Original data Cytokinin treatment of seedlings
596 cat2-long-day 2d -0.53 >More info -0.19 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
597 seedling -0.50 >More info -0.22 >More info Control for tissue data seedling Original data GEO bulk
598 RGA-GR-DEX 0.20 >More info 0.52 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
599 penta MeJA 1h 0.54 >More info 0.17 >More info Laer MeJA 1h leaf discs Original data GEO bulk
600 AAF-OX 0.54 >More info 0.17 >More info Col-0 Rosette leaf Original data GEO bulk
601 axr2-BR -0.51 >More info -0.20 >More info BR BR dark-grown seedlings Original data GEO bulk
602 col-5 DC3000 4h 0.20 >More info 0.51 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
603 35S:GIF -0.19 >More info -0.52 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
604 glk1 glk2 GLK1-GR +DEX 24h -0.54 >More info -0.16 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
605 Col-0 0h NAA 0.17 >More info 0.53 >More info Col-0 6h MOCK Original data GEO bulk
606 abi1 hypocotyl 0.17 >More info 0.53 >More info Ler hypocotyl hypocotyl Original data GEO bulk
607 ex1ex2flu dark 8hours/30 minute light -0.50 >More info -0.20 >More info col dark 8hours/30 minute light Original data GEO bulk
608 Total RNA 35S:HF-RPL18 cold 0.51 >More info 0.19 >More info Total RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
609 ptpks2 -0.18 >More info -0.52 >More info Col-WT leaves Original data GEO bulk
610 HairpinZ 4 h (leaf) 0.72 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
611 2hr continuous KNO3 PeR cell -0.13 >More info -0.55 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
612 vte2 leaves 120h LT 0.63 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
613 Prohexadione 3 h 0.15 >More info 0.52 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
614 -Sulfate 24 h 0.17 >More info 0.50 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
615 opr3 OPDA 2 h 0.11 >More info 0.56 >More info opr3 0 h Original data GEO bulk
616 cat2-short-day 2d 0.07 >More info 0.60 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
617 Kas -Fe 48h Shoots 0.51 >More info 0.15 >More info Kas +Fe 24h Shoots Original data GEO bulk
618 WT Red light 1h 0.53 >More info 0.13 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
619 phosphate-starved 0.09 >More info 0.57 >More info control shoot tissue Original data GEO bulk
620 Col0 roots 2hr KNO3 nitrogen -0.08 >More info -0.58 >More info Col0 roots 2hr KCl control root Original data GEO bulk
621 35:SUB1C 0.51 >More info 0.14 >More info WT whole seedling Original data GEO bulk
622 2xX6x interploidy cross 0.11 >More info 0.53 >More info 2xX2x cross Original data GEO bulk
623 Chemically 0.01 >More info 0.63 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
624 Col PSTDC3000 24h 0.75 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
625 TaFLS overexpression line (OE1) -0.65 >More info 0.03 >More info Col-0 Rosette leaves Original data
626 shoot control pSUC2 0.51 >More info 0.11 >More info shoot control total Original data GEO bulk
627 seedling 3h after HZE WT 0.59 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
628 SHR-GR Time 6H Dex -0.09 >More info -0.52 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
629 A. halleri highZn-leaf 0.08 >More info 0.52 >More info A. petraea highZn-leaf Original data GEO bulk
630 bri1-116 -0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
631 calcicole ecotype Cal-0 0.51 >More info 0.07 >More info Col-4 1 mM CaCl2 Original data GEO bulk
632 pvip1 pvip2 seedling 0.60 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
633 0h hml 0.50 >More info 0.04 >More info 0h wt Original data
634 P. infestans 6 h (leaf) 0.68 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
635 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
636 Shoot submergence 7h 0.50 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
637 FarRed Light 45min 0.08 >More info -0.58 >More info White Light 45min Original data Light treatments
638 Red/FR Light45min -0.18 >More info 0.65 >More info FarRed Light 45min Original data Light treatments
639 Mutant sav3-2 (WL) -0.11 >More info 0.58 >More info Col-0 (WL) Original data GEO bulk
640 sav3-2 light -0.11 >More info 0.58 >More info Col-0 light seedlings Original data GEO bulk
641 lec2-1 12 DAF Seed -0.50 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
642 Heat shock optimum -0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
643 Mh0 UV -0.69 >More info 0.24 >More info Mh0 mock UV seedling Original data
644 3x(m) -0.14 >More info 0.59 >More info 2x two week old seedlings Original data
645 flu dark 8hours/30 minute light -0.07 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
646 xyl-grown cell culture- 1h 1mM Suc 0.10 >More info -0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
647 Split KNO3 roots - 8hours 0.14 >More info -0.57 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
648 G3P 0.53 >More info -0.11 >More info Mock distal leaves Original data GEO bulk
649 4d red light grown hmr-22 seedlings 0.58 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
650 seed germinating in countinuous light 24h SL -0.42 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
651 Light 3day hml -0.40 >More info 0.57 >More info 0h hml Original data
652 Shoot apex inflorescence (after bolting) -0.55 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages