4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on whole roots 140 mM NaCl 4 hour
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List of experiments correlated with "whole roots 140 mM NaCl 4 hour"  Help Download transcriptome of top 30
Score Experiment Correlation from
whole roots 140 mM NaCl 4 hour		 Correlation to
whole roots 140 mM NaCl 4 hour		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 whole roots 140 mM NaCl 4 hour 1.00 >More info 1.00 >More info whole roots standard Original data GEO bulk
2 whole roots 140 mM NaCl 16 hour 0.91 >More info 0.93 >More info whole roots standard Original data GEO bulk
3 whole roots 140 mM NaCl 32 hour 0.86 >More info 0.83 >More info whole roots standard Original data GEO bulk
4 ABA 3 h 0.86 >More info 0.82 >More info Mock 3 h Original data Basic hormone treatment of seedlings
5 Osmotic Stress 24 h (root) 0.86 >More info 0.82 >More info Stress mock 24 h (root) Original data Stress treatments
6 root endodermis and quiescent center 40 mM NaCl 0.81 >More info 0.83 >More info root endodermis and quiescent center Original data GEO bulk
7 whole roots 140 mM NaCl 1 hour 0.82 >More info 0.82 >More info whole roots standard Original data GEO bulk
8 NaCl Col 0.78 >More info 0.84 >More info Col Original data GEO bulk
9 root longitudinal zone-4 NaCl 0.77 >More info 0.85 >More info root longitudinal zone-4 Original data GEO bulk
10 root BA 12h 0.80 >More info 0.81 >More info root control 12h boron (5mM) root Original data GEO bulk
11 whole roots 140 mM NaCl 30 minutes 0.72 >More info 0.89 >More info whole roots standard Original data GEO bulk
12 root cells cortex 140mM NaCl 1 hour 0.80 >More info 0.75 >More info root cells cortex standard 1 hour root cells cortex Original data
13 ABA 1 h 0.72 >More info 0.81 >More info Mock 1 h Original data Basic hormone treatment of seedlings
14 root cells stele 140mM NaCl 1 hour 0.80 >More info 0.70 >More info root cells stele standard 1 hour root cells stele Original data
15 rosettes myoox drought 0.78 >More info 0.70 >More info rosettes myoox watered Original data GEO bulk
16 C2 leaf-drought 0.76 >More info 0.72 >More info C2 leaf-well watered Original data GEO bulk
17 Salt Stress 24 h (root) 0.85 >More info 0.62 >More info Stress mock 24 h (root) Original data Stress treatments
18 root columella root cap 40 mM NaCl 0.71 >More info 0.73 >More info root columella root cap Original data GEO bulk
19 ABA 24h 0.74 >More info 0.70 >More info EtOH 24h 24hr Original data GEO bulk
20 WT leaf-drought 0.76 >More info 0.67 >More info WT leaf-well watered Original data GEO bulk
21 rosettes WT drought 0.77 >More info 0.66 >More info rosettes WT watered Original data GEO bulk
22 rosettes atx drought 0.77 >More info 0.66 >More info rosettes atx watered Original data GEO bulk
23 root cells stele 140mM NaCl 3 hours 0.76 >More info 0.67 >More info root cells stele standard 1 hour root cells stele Original data
24 root cells endodermis 140mM NaCl 1 hour 0.73 >More info 0.70 >More info root cells endodermis standard 1 hour root cells endodermis Original data
25 rosettes drought 0.77 >More info 0.65 >More info rosettes watered Original data GEO bulk
26 ABA SA 3h 0.72 >More info 0.70 >More info EtOH 3h 3hr Original data GEO bulk
27 ABA DFPM 0.79 >More info 0.63 >More info control Original data GEO bulk
28 root stele 40 mM NaCls 0.72 >More info 0.68 >More info root stele Original data GEO bulk
29 T6 leaf-drought 0.68 >More info 0.70 >More info T6 leaf-well watered Original data GEO bulk
30 Osmotic Stress 24 h (shoot) 0.75 >More info 0.62 >More info Stress mock 24 h (shoot) Original data Stress treatments
31 dor drought 0.66 >More info 0.71 >More info WT drought Original data GEO bulk
32 Salt Stress 24 h (shoot) 0.74 >More info 0.62 >More info Stress mock 24 h (shoot) Original data Stress treatments
33 ABA 0.72 >More info 0.64 >More info control Original data GEO bulk
34 WT (Col-0) inflorescence drought day 5 0.82 >More info 0.53 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
35 T8 leaf-drought 0.72 >More info 0.63 >More info T8 leaf-well watered Original data GEO bulk
36 low water potential 0.76 >More info 0.59 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
37 root cells cortex 140mM NaCl 3 hours 0.79 >More info 0.55 >More info root cells cortex standard 1 hour root cells cortex Original data
38 root longitudinal zone-3 NaCl 0.65 >More info 0.69 >More info root longitudinal zone-3 Original data GEO bulk
39 root cells stele 140mM NaCl 8 hours 0.71 >More info 0.62 >More info root cells stele standard 1 hour root cells stele Original data
40 root cells cortex 140mM NaCl 8 hours 0.75 >More info 0.57 >More info root cells cortex standard 1 hour root cells cortex Original data
41 root cells epidermis 140mM NaCl 1 hour 0.71 >More info 0.61 >More info root cells epidermis standard 1 hour root cells epidermis Original data
42 root longitudinal zone-2 NaCl 0.56 >More info 0.74 >More info root longitudinal zone-2 Original data GEO bulk
43 root cortex 40 mM NaCl 0.77 >More info 0.51 >More info root cortex Original data GEO bulk
44 ced1 -0.78 >More info -0.50 >More info WT PEG 6hr seedlings Original data GEO bulk
45 Col-0 0h NAA 0.66 >More info 0.61 >More info Col-0 6h MOCK Original data GEO bulk
46 root cells endodermis 140mM NaCl 3 hours 0.70 >More info 0.57 >More info root cells endodermis standard 1 hour root cells endodermis Original data
47 ABA JA 3h 0.61 >More info 0.66 >More info EtOH 3h 3hr Original data GEO bulk
48 root cells epidermis 140mM NaCl 3 hours 0.72 >More info 0.54 >More info root cells epidermis standard 1 hour root cells epidermis Original data
49 WT salt 12 h 0.66 >More info 0.59 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
50 root epidermis and lateral root cap 40 mM NaCl 0.66 >More info 0.58 >More info root epidermis and lateral root cap Original data GEO bulk
51 ABA 3h 0.62 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
52 ABA+DMTU 0.64 >More info 0.59 >More info control Original data GEO bulk
53 WT 24H Cold 0.70 >More info 0.52 >More info WT control Original data GEO bulk
54 DUO1 induced 24h 0.72 >More info 0.49 >More info 24hr-not-induced whole plant Original data GEO bulk
55 Homozygous-AtcesA6 0.64 >More info 0.57 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
56 DUO1 induced 12h 0.71 >More info 0.50 >More info 12hr-not-induced whole plant Original data GEO bulk
57 Cold Stress 24 h (root) 0.67 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
58 Col-0 +ABA LF 0.57 >More info 0.62 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
59 Heat no recovery 0.78 >More info 0.41 >More info Mock no recovery seedling Original data GEO bulk
60 slr-1 0h NAA -0.67 >More info -0.52 >More info Col-0 0h NAA Original data GEO bulk
61 ABA control 0.65 >More info 0.53 >More info No ABA control Original data GEO bulk
62 WT (Col-0) inflorescence drought day 10 0.71 >More info 0.46 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
63 Col-0 +ABA GC 0.59 >More info 0.58 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
64 Col-0 under 4 days salt 0.62 >More info 0.55 >More info Col-0 under control 4 days salt treatment rosette Original data
65 24h +Pi -0.58 >More info -0.59 >More info 24h -Pi root Original data GEO bulk
66 -Sulfate 24 h 0.44 >More info 0.73 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
67 root longitudinal zone-1 NaCl 0.49 >More info 0.68 >More info root longitudinal zone-1 Original data GEO bulk
68 Col-0 drought 0.60 >More info 0.55 >More info Col-0 control Original data GEO bulk
69 Col-0 2h NAA 0.68 >More info 0.46 >More info Col-0 6h MOCK Original data GEO bulk
70 siliques AtHb1 control 0.62 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
71 root cells columella root cap -Fe 0.68 >More info 0.46 >More info whole roots standard Original data GEO bulk
72 root protophloem 40 mM NaCl 0.64 >More info 0.49 >More info root protophloem Original data GEO bulk
73 WT 3H Cold 0.49 >More info 0.63 >More info WT control Original data GEO bulk
74 ACN1-2 -0.56 >More info -0.55 >More info col-7 Original data GEO bulk
75 root cells epidermis 140mM NaCl 8 hours 0.63 >More info 0.47 >More info root cells epidermis standard 1 hour root cells epidermis Original data
76 ABA SA 24h 0.53 >More info 0.57 >More info EtOH 24h 24hr Original data GEO bulk
77 6h +Pi -0.58 >More info -0.52 >More info 6h -Pi root Original data GEO bulk
78 dicamba 0.66 >More info 0.44 >More info WT mock whole seedling Original data GEO bulk
79 pip3 At2g19270 RNAi 32 0.68 >More info 0.41 >More info Nd-1 whole plant Original data GEO bulk
80 GA4 3 h (ga1 seed) 0.67 >More info 0.42 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
81 hai1-2 low water potential 0.51 >More info 0.57 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
82 rsa1 salt 0 h 0.61 >More info 0.47 >More info WT salt 0 h Control seedlings Original data GEO bulk
83 root cells stele 140mM NaCl 20 hours 0.56 >More info 0.51 >More info root cells stele standard 1 hour root cells stele Original data
84 Ws 100mM NaCl 0.61 >More info 0.46 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
85 Ws leaf 100mM NaCl 0.61 >More info 0.46 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
86 Col-O high light 0.64 >More info 0.43 >More info Col-O bule light Original data GEO bulk
87 root cells stele 140mM NaCl 32 hours 0.59 >More info 0.48 >More info root cells stele standard 1 hour root cells stele Original data
88 WT (Col-0) inflorescence moderate drought day 10 0.58 >More info 0.48 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
89 root Dosed gold 0.57 >More info 0.49 >More info root No gold .125 mM gold 24 h roots Original data
90 0.125 mM gold 24 h 0.57 >More info 0.49 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
91 Col0-PsmES4326-24hpi 0.45 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
92 WT seedlings NaCl 0.59 >More info 0.46 >More info WT seedlings control Seedlings Original data GEO bulk
93 root cells cortex 140mM NaCl 20 hours 0.63 >More info 0.42 >More info root cells cortex standard 1 hour root cells cortex Original data
94 ABA 0.5 h 0.67 >More info 0.38 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
95 Seedling-HeatStressed POLYSOMESmRNA 0.62 >More info 0.43 >More info Seedling-control POLYSOMESmRNA seedling Original data
96 Col-0 leaf drought 0.64 >More info 0.41 >More info Col-0 leaf water leaf Original data GEO bulk
97 WT (Col-0) inflorescence moderate drought day 5 0.63 >More info 0.42 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
98 root cells endodermis 140mM NaCl 8 hours 0.58 >More info 0.47 >More info root cells endodermis standard 1 hour root cells endodermis Original data
99 6 h SL WT -0.65 >More info -0.39 >More info 0 h WT seed Original data
100 WT Seedling BL+ABA 0.61 >More info 0.43 >More info WT Seedling BL Original data GEO bulk
101 entire vegetative rosette 0.61 >More info 0.43 >More info Col-0 Mock WL entire vegetative rosette Original data
102 root cells endodermis and quiescent center -Fe 0.63 >More info 0.40 >More info whole roots standard Original data GEO bulk
103 Homozygous-AtcesA4 0.55 >More info 0.48 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
104 Cold Stress 24 h (shoot) 0.50 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
105 60m light 0.59 >More info 0.43 >More info before light whole seedlings Original data GEO bulk
106 Seedling-HeatStressed TOTALmRNA 0.61 >More info 0.41 >More info Seedling-control TOTALmRNA seedling Original data
107 naxillin 3h 0.51 >More info 0.50 >More info before treatment naxillin root Original data GEO bulk
108 ACN1-2 Sucrose -0.48 >More info -0.53 >More info Col-7 Sucrose Original data GEO bulk
109 hsfa1 quadruple mutant 0.63 >More info 0.37 >More info WT (Col-0) whole seedling Original data GEO bulk
110 coi1-2 0.50 >More info 0.49 >More info Col-0 mock Whole seedling Original data GEO bulk
111 Col(gl) leaf 100mM NaCl -0.57 >More info -0.42 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
112 Col(gl) 100mM NaCl -0.57 >More info -0.42 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
113 oas-a1.1 Cd 18h 0.37 >More info 0.62 >More info Cd 18h root Root Original data GEO bulk
114 35SPaWRKY1 0.62 >More info 0.36 >More info Vector Seedlings including shoot and root Original data GEO bulk
115 root cells cortex 140mM NaCl 48 hours 0.59 >More info 0.39 >More info root cells cortex standard 1 hour root cells cortex Original data
116 gul2-1 mutant 0.61 >More info 0.37 >More info WT 7 day-old whole seedlings Original data
117 CMP 24hr 0.65 >More info 0.33 >More info Acetone 24hr root Original data GEO bulk
118 short 10-degree- 0.33 >More info 0.65 >More info control short Original data GEO bulk
119 ABA JA 24h 0.43 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
120 chl1-9 10mM NH4NO3 -0.59 >More info -0.38 >More info col 10mM NH4NO3 Root Original data
121 RL/LD atbzip16 -0.57 >More info -0.40 >More info RL/LD Ler grown under dark or red-light and long-day (0.5 μmole m-2 sec-1) aerial part of seedlings Original data GEO bulk
122 24h SL WT -0.55 >More info -0.42 >More info 0 h WT seed Original data
123 rid4 IBA -0.65 >More info -0.32 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
124 mp-B4149 mutant IAA 0.61 >More info 0.36 >More info GR-bdl IAA Original data GEO bulk
125 Leafminer damaged seedlings 0.41 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
126 bak1-3 +Pep2 10h 0.55 >More info 0.41 >More info WT +Pep2 10h Pep2 Original data GEO bulk
127 PIF5ox high R/FR 0.52 >More info 0.44 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
128 vtc2 day 7 induction -0.61 >More info -0.35 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
129 rdr6-15 -0.53 >More info -0.43 >More info Col-0 Original data GEO bulk
130 6 h SL Attim 17-1 1 -0.59 >More info -0.37 >More info 0 h Attim 17-1 1 seed Original data
131 dcl2-1 0.61 >More info 0.34 >More info Col-0 Original data GEO bulk
132 Col-O low light -0.59 >More info -0.36 >More info Col-O bule light Original data GEO bulk
133 Imbibed 24 h ABA 30uM (seed) 0.66 >More info 0.28 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
134 amiR-tor induced 6d 0.55 >More info 0.39 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
135 Col-0 flu HL 3h 0.53 >More info 0.41 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
136 (Col-0)+200 uM As 0.52 >More info 0.42 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
137 Light 3day hml 0.35 >More info 0.59 >More info 0h hml Original data
138 WT 6H Cold 0.36 >More info 0.58 >More info WT control Original data GEO bulk
139 NJ15 0.50 >More info 0.43 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
140 root cells epidermis 140mM NaCl 20 hours 0.55 >More info 0.37 >More info root cells epidermis standard 1 hour root cells epidermis Original data
141 WT cold 0.50 >More info 0.42 >More info WT control All aerial tissue Original data GEO bulk
142 des1 water 0.50 >More info 0.42 >More info WT water water leaf Original data GEO bulk
143 Hypoxic e1 ate -0.62 >More info -0.30 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
144 dark-hs 0.51 >More info 0.40 >More info dark-control seedling Original data
145 clf-28 swn-7 0.53 >More info 0.38 >More info Col whole plant Original data GEO bulk
146 48 h S Attim 17-1 1 -0.57 >More info -0.34 >More info 0 h Attim 17-1 1 seed Original data
147 root cells -Fe 0.54 >More info 0.36 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
148 Roots Cd -0.40 >More info -0.50 >More info Roots control Cd Root Original data GEO bulk
149 pif3 Dark 1h -0.55 >More info -0.34 >More info WT Dark 1h etiolated seedling Original data GEO bulk
150 root cells stele -Fe 0.53 >More info 0.36 >More info whole roots standard Original data GEO bulk
151 WT (Col-0) inflorescence well-watered day 4 0.52 >More info 0.37 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
152 48 h S WT -0.53 >More info -0.36 >More info 0 h WT seed Original data
153 xyl-grown cell culture- 1h 1mM Suc 0.36 >More info 0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
154 frb1 mutant 0.54 >More info 0.34 >More info WT whole seedling Original data GEO bulk
155 WT 30μM phosphate 8 hours. -0.55 >More info -0.33 >More info WT control (not supplemented). Original data
156 gun4-1 0.52 >More info 0.36 >More info WT Col-0 seedling Original data GEO bulk
157 WT (Col-0) inflorescence moderate drought day 4 0.53 >More info 0.35 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
158 Dark 2day hml 0.56 >More info 0.31 >More info 0h hml Original data
159 nia1nia2 0.53 >More info 0.34 >More info Col-0 whole seedlings Original data GEO bulk
160 Mutant cry1 0.52 >More info 0.35 >More info Col-0 Original data GEO bulk
161 cry1 low light 0.52 >More info 0.35 >More info Col-O low light Original data GEO bulk
162 Root -Cs 0.36 >More info 0.51 >More info Control-root Original data GEO bulk
163 bbx24 in Simulated Shade -0.58 >More info -0.29 >More info WT in simulated shade shade seedling Original data
164 Aerobic prt6 -0.69 >More info -0.18 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
165 Fenclorim 24hr 0.54 >More info 0.32 >More info Acetone 24hr root Original data GEO bulk
166 ws 24h4c q8ws 0.55 >More info 0.31 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
167 hai1-2 0.51 >More info 0.35 >More info control control whole seedlings Original data GEO bulk
168 chl1-5 10mM NH4NO3 -0.62 >More info -0.24 >More info col 10mM NH4NO3 Root Original data
169 3x(p) 0.55 >More info 0.30 >More info 2x two week old seedlings Original data
170 seedling -S Exp 0.27 >More info 0.58 >More info seedling FN Exp seedling Original data
171 RRE2 Chitin 0.55 >More info 0.29 >More info Chitin Original data GEO bulk
172 Heat 0.54 >More info 0.30 >More info Control 90 minutes at 38°C. Original data GEO bulk
173 tt4 UV 0.66 >More info 0.18 >More info UV aerial region Original data GEO bulk
174 pip3 At2g19270 TDNA 1 -0.54 >More info -0.30 >More info Col-0 whole plant Original data GEO bulk
175 short 8-degree- 0.18 >More info 0.66 >More info control short Original data GEO bulk
176 camta1/2 warm -0.34 >More info -0.50 >More info WT 24h cold entire aerial part Original data GEO bulk
177 Mutant arf2-6 (IAA) 0.59 >More info 0.25 >More info Col (IAA) Original data GEO bulk
178 mutant-line1135 -0.52 >More info -0.31 >More info WT-control whole plant Original data GEO bulk
179 dcl3-1 0.52 >More info 0.31 >More info Col-0 Original data GEO bulk
180 aba2 1% sucrose 12-day-old -0.54 >More info -0.29 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
181 ddm1-12 -0.52 >More info -0.31 >More info wt whole seedling Original data GEO bulk
182 seed germinating in countinuous light 24h SL 0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
183 csn5 (csn5a-2 csn5b) light 0.58 >More info 0.25 >More info WT light Original data GEO bulk
184 Fenclorim 4hr 0.55 >More info 0.27 >More info Acetone 4hr root Original data GEO bulk
185 sav1-1 shade -0.55 >More info -0.27 >More info Col-0 shade seedlings Original data GEO bulk
186 rli 0.53 >More info 0.29 >More info WT whole plant Original data GEO bulk
187 chl1-12 10mM NH4NO3 -0.60 >More info -0.22 >More info col 10mM NH4NO3 Root Original data
188 intact root auxin 0.52 >More info 0.29 >More info intact root control 5 uM indole-3-acetic acid whole root Original data GEO bulk
189 pip3 At2g19270 TDNA 6h-1 0.56 >More info 0.25 >More info Col-0 whole plant Original data GEO bulk
190 OsTOP6A3 ox -0.63 >More info -0.18 >More info WT Original data GEO bulk
191 Red/FR Light45min 0.30 >More info 0.51 >More info FarRed Light 45min Original data Light treatments
192 4C 1h 0.27 >More info 0.54 >More info 4C 0h Original data GEO bulk
193 camta1 leaf drought -0.66 >More info -0.14 >More info Col-0 leaf drought leaf Original data GEO bulk
194 abi4-102 -lincomycin -0.64 >More info -0.16 >More info Col-0 -lincomycin Original data GEO bulk
195 short 12-degree- 0.18 >More info 0.62 >More info control short Original data GEO bulk
196 Col0 roots 2hr KNO3 nitrogen -0.24 >More info -0.56 >More info Col0 roots 2hr KCl control root Original data GEO bulk
197 FOX line K16331 0.59 >More info 0.21 >More info empty vector control (T3) FOX lines Original data GEO bulk
198 Col-0 mbs1-1 HL 3h 0.54 >More info 0.25 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
199 csn4-1 dark 0.60 >More info 0.19 >More info WT light Original data GEO bulk
200 Mutant iaa17-6 (IAA) 0.26 >More info 0.53 >More info Col (IAA) Original data GEO bulk
201 control leaf (cmt 5d) 0.27 >More info 0.52 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
202 npr1 sni1 brca2a 0.58 >More info 0.21 >More info npr1 sni1 water water seedling Original data GEO bulk
203 Dark 40 min pls UV-A 5 min 0.58 >More info 0.21 >More info Dark 45 min Original data Light treatments
204 GV3101 3hpi -0.53 >More info -0.25 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
205 estradiol induced LEC1 0.54 >More info 0.24 >More info control Original data GEO bulk
206 Estradiol4 days 0.54 >More info 0.24 >More info Col Original data GEO bulk
207 GV3101 6dpi -0.27 >More info -0.51 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
208 TNT-seedlings 0.25 >More info 0.53 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
209 hyl1 -0.62 >More info -0.15 >More info Col-0 Original data GEO bulk
210 root cells cortex 140mM NaCl 32 hours 0.52 >More info 0.25 >More info root cells cortex standard 1 hour root cells cortex Original data
211 Apex mir-3TCP 14DAS -0.22 >More info -0.55 >More info Apex Col 14DAS Original data GEO bulk
212 Laer pretreat GA Flg22 1h 0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
213 seedling h S Exp -0.17 >More info -0.60 >More info seedling -S Exp seedling Original data
214 Dark 3day wt 0.50 >More info 0.26 >More info 0h wt Original data
215 2h KNO3 Whole root -0.52 >More info -0.24 >More info 2h KCl control Whole root Whole root Original data GEO bulk
216 Ws 2h KNO3 -0.51 >More info -0.24 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
217 dcl1-7 -0.63 >More info -0.12 >More info Ler Original data GEO bulk
218 rosette leaves bdg 0.24 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
219 csn3-1 light 0.50 >More info 0.24 >More info WT light Original data GEO bulk
220 gir flower 33d -0.59 >More info -0.15 >More info Col-7 flower 33d flower Original data GEO bulk
221 sfr3 control 0.50 >More info 0.24 >More info WT control All aerial tissue Original data GEO bulk
222 Col BTH 0.07 >More info 0.67 >More info Col rosettes Original data GEO bulk
223 Base wox4 -0.69 >More info -0.02 >More info Base Col base of stem Original data GEO bulk
224 nia1nia2noa1-2 0.53 >More info 0.18 >More info Col-0 whole seedlings Original data GEO bulk
225 Shoot apex inflorescence (after bolting) 0.06 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
226 bri1-116 -0.02 >More info 0.73 >More info Col seedling Original data GEO bulk
227 Whole root - low pH 48H -0.20 >More info -0.51 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
228 seed freshly harvested H 0.56 >More info 0.14 >More info Control for tissue data seed Original data GEO bulk
229 rgs1+mannitol 0.50 >More info 0.20 >More info WT+mannitol rosette leaves Original data GEO bulk
230 rdr2-1 0.55 >More info 0.14 >More info Col-0 Original data GEO bulk
231 spores of Gigaspora rosea -0.74 >More info 0.05 >More info Control Original data GEO bulk
232 Mutant axr3-1 (IAA) 0.07 >More info 0.62 >More info Col (IAA) Original data GEO bulk
233 Inflorescences Trp1 -0.52 >More info -0.16 >More info Inflorescences ler inflorescences Original data GEO bulk
234 dry seed 0 h 0.54 >More info 0.14 >More info Control for tissue data seed Original data GEO bulk
235 Stem wox4 -0.60 >More info -0.07 >More info Stem Col first internode of stem Original data GEO bulk
236 Brz220 3 h 0.51 >More info 0.15 >More info Mock 3 h Original data Effect of brassinosteroid inhibitors on seedlings
237 Heat shock optimum 0.01 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
238 Chemically 0.13 >More info 0.53 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
239 seed during stratification 1 h S 0.51 >More info 0.14 >More info Control for tissue data seed Original data GEO bulk
240 Mutant axr3-1 0.13 >More info 0.52 >More info Col Original data GEO bulk
241 iron minus 24h -0.12 >More info -0.53 >More info iron +24h root Original data GEO bulk
242 Whole root - S 48H 0.15 >More info 0.50 >More info Whole root - S 0H Original data GEO bulk
243 2d dark-grown WT(Col-0)/1 hr red light 0.55 >More info 0.09 >More info 2d dark-grown WT seedling Original data GEO bulk
244 3d old, both 10mM sucrose and 0.2µM SMX -0.50 >More info -0.14 >More info control Whole seedling Original data GEO bulk
245 rrd1 IBA 0.57 >More info 0.05 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
246 ABA 0.84 >More info -0.22 >More info control Original data GEO bulk
247 WT Atum 1h 0.02 >More info -0.63 >More info WT 0h Leaf tissue Original data GEO bulk
248 eif3h non-polysome 0.53 >More info 0.07 >More info WT non-polysome Original data GEO bulk
249 Col-0 +lincomycin -0.52 >More info -0.08 >More info Col-0 -lincomycin Original data GEO bulk
250 WT (Col-0) inflorescence drought day 4 0.51 >More info 0.09 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
251 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
252 OsTOP6B ox -0.50 >More info -0.08 >More info WT Original data GEO bulk
253 bbx24 in With Light -0.51 >More info -0.06 >More info WT in With Light light seedling Original data
254 siliques WT hypoxia 0.55 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
255 tt4 -0.56 >More info -0.00 >More info WT aerial region Original data GEO bulk
256 ddm1 mutant seedlings 0.55 >More info 0.01 >More info control seedlings 10-day old whole seedling Original data GEO bulk
257 ANAC102 knock-out -0.60 >More info 0.04 >More info Col-0 Original data GEO bulk
258 cngc19 -0.51 >More info -0.03 >More info Col-0 root Original data GEO bulk
259 Total RNA 35S:AtCSP1-FH1 -0.52 >More info -0.01 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
260 GA3 0.5 h (ga1) 0.08 >More info -0.61 >More info Mock 0.5 h (ga1) Original data Basic hormone treatment of seedlings
261 Full AC2 T2 -0.55 >More info 0.05 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
262 Mock pft1 leaf 0.00 >More info -0.50 >More info Mock Col-0 leaf water leaf Original data GEO bulk
263 Whole root - S 24H -0.04 >More info 0.54 >More info Whole root - S 0H Original data GEO bulk
264 AsAKiin11 T2 -0.03 >More info 0.50 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
265 Aerobic e1 ate2 -0.52 >More info 0.09 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
266 2xX4x interploidy cross -0.50 >More info 0.08 >More info 2xX2x cross Original data GEO bulk
267 Imbibed 24 h ABA 3uM (seed) 0.52 >More info -0.11 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
268 IAA7mII over-expressor IAA Treated -0.28 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
269 Dark 0.14 >More info -0.52 >More info Control Original data GEO bulk
270 endosperm ABA 0.50 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
271 bZIP1ko mutant N+Light- -0.17 >More info 0.54 >More info WT-sib N+Light- whole plant Original data GEO bulk