4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on rid4 IBA
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "rid4 IBA"  Help Download transcriptome of top 30
Score Experiment Correlation from
rid4 IBA		 Correlation to
rid4 IBA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rid4 IBA 1.00 >More info 1.00 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
2 rrd2 IBA 0.75 >More info 0.78 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
3 rrd1 IBA 0.75 >More info 0.70 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
4 ABA DFPM -0.54 >More info -0.49 >More info control Original data GEO bulk
5 IMI 4mM -0.46 >More info -0.55 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
6 35S:RPS4 eds1-2 24h 0.45 >More info 0.56 >More info 35S:RPS4 24h leaves Original data
7 Col-0 C2H4 24h -0.53 >More info -0.45 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
8 SLWF infested -0.53 >More info -0.45 >More info SLWF uninfested rosette tissue Original data GEO bulk
9 pad4-PsmES4326-24hpi 0.47 >More info 0.50 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
10 whole roots 140 mM NaCl 4 hour -0.32 >More info -0.65 >More info whole roots standard Original data GEO bulk
11 Dark 3day ivd -0.54 >More info -0.42 >More info 0h ivd Original data
12 ABA 3 h -0.40 >More info -0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
13 CMP 24hr -0.43 >More info -0.51 >More info Acetone 24hr root Original data GEO bulk
14 seed germinating in countinuous light 24h SL 0.26 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
15 efr-1 +elf18 10h 0.55 >More info 0.37 >More info WT +elf18 10h elf18 Original data GEO bulk
16 Osmotic Stress 24 h (shoot) -0.42 >More info -0.50 >More info Stress mock 24 h (shoot) Original data Stress treatments
17 Shoot apex inflorescence (after bolting) 0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
18 rosettes WT drought -0.37 >More info -0.54 >More info rosettes WT watered Original data GEO bulk
19 Mutant gh3.5-1D (AvrRpt2) -0.40 >More info -0.50 >More info Col-0 (AvrRpt2) Original data GEO bulk
20 root - 08% oxygen - 48h 0.35 >More info 0.55 >More info root - 21% oxygen - 48h Original data GEO bulk
21 pad2-PsmES4326-24hpi 0.37 >More info 0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
22 Seedling KUA1-IOX est -0.33 >More info -0.54 >More info Seedling KUA1-IOX mock Original data
23 coi1-2 -0.50 >More info -0.37 >More info Col-0 mock Whole seedling Original data GEO bulk
24 Light 0.5h steady-state -0.37 >More info -0.50 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
25 rosettes myoox drought -0.36 >More info -0.50 >More info rosettes myoox watered Original data GEO bulk
26 seedling h S Exp 0.34 >More info 0.51 >More info seedling -S Exp seedling Original data
27 Red/FR Light45min -0.16 >More info -0.69 >More info FarRed Light 45min Original data Light treatments
28 Osmotic Stress 24 h (root) -0.32 >More info -0.52 >More info Stress mock 24 h (root) Original data Stress treatments
29 bri1-116 0.11 >More info 0.73 >More info Col seedling Original data GEO bulk
30 root - 08% oxygen - 2h 0.27 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
31 til1-1 22C -0.30 >More info -0.52 >More info Col-0 22C Original data GEO bulk
32 2hr continuous KNO3 ECR cell -0.14 >More info -0.66 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
33 miR393 0h 0.27 >More info 0.52 >More info WT 0h Leaf tissue Original data GEO bulk
34 whole roots 140 mM NaCl 16 hour -0.26 >More info -0.53 >More info whole roots standard Original data GEO bulk
35 WT +elf18 10h -0.50 >More info -0.28 >More info WT untreated elf18 Original data GEO bulk
36 root longitudinal zone-3 pH 4.6 0.18 >More info 0.60 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
37 AtMYB30-as 90-105 min Xanthomonas -0.22 >More info -0.56 >More info WT 90-105 min Xanthomonas Original data GEO bulk
38 ABA control -0.17 >More info -0.59 >More info No ABA control Original data GEO bulk
39 whole roots 140 mM NaCl 30 minutes -0.21 >More info -0.54 >More info whole roots standard Original data GEO bulk
40 gun1-1 -lincomycin 0.54 >More info 0.20 >More info Col-0 -lincomycin Original data GEO bulk
41 root longitudinal zone-4 NaCl -0.24 >More info -0.50 >More info root longitudinal zone-4 Original data GEO bulk
42 35S:MYB28 like miR 0.14 >More info 0.58 >More info WT for miR Original data GEO bulk
43 Heat shock optimum 0.06 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
44 ABA 1 h -0.10 >More info -0.60 >More info Mock 1 h Original data Basic hormone treatment of seedlings
45 AvrRpm1 2 h (leaf) -0.20 >More info -0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
46 SAM SE agl15 agl18 double mutant 0.10 >More info 0.57 >More info SAM SE Col Original data GEO bulk
47 Light 0.5h polysome-bound -0.13 >More info -0.51 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
48 FarRed Light 45min 0.07 >More info 0.55 >More info White Light 45min Original data Light treatments
49 T6 leaf-drought -0.11 >More info -0.50 >More info T6 leaf-well watered Original data GEO bulk
50 35S:ATR1 like miR 0.04 >More info 0.57 >More info WT for miR Original data GEO bulk
51 arp6-10 12 ºC -0.06 >More info -0.54 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
52 2hr transitory KNO3 ECR cell -0.03 >More info -0.54 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
53 roottip hypoxia pSCR -0.00 >More info -0.50 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
54 IAA7mII over-expressor IAA Treated -0.20 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
55 pGL3::GL3-GR Dex 24hours 0.03 >More info -0.51 >More info pGL3::GL3-GR mock 24hours Original data GEO bulk
56 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
57 Laer pretreat GA Flg22 1h -0.35 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
58 Col BTH -0.32 >More info 0.67 >More info Col rosettes Original data GEO bulk
59 Light 3day hml 0.21 >More info -0.53 >More info 0h hml Original data
60 Leafminer damaged seedlings -0.41 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
61 siliques AtHb1 control -0.37 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
62 Col0-PsmES4326-24hpi -0.50 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk