4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on 2hr continuous KNO3 ECR cell
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "2hr continuous KNO3 ECR cell"  Help Download transcriptome of top 30
Score Experiment Correlation from
2hr continuous KNO3 ECR cell		 Correlation to
2hr continuous KNO3 ECR cell		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 2hr continuous KNO3 ECR cell 1.00 >More info 1.00 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
2 2hr transitory KNO3 ECR cell 0.91 >More info 0.90 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
3 2hr continuous KNO3 and MSX PeR cell 0.72 >More info 0.81 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
4 Ws 2h KNO3 0.74 >More info 0.72 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
5 Col 0 2h KNO3 0.68 >More info 0.68 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk
6 250uM K-nitrate 20min roots 0.69 >More info 0.66 >More info 250uM KCl 20min roots Roots Original data GEO bulk
7 2hr continuous KNO3 EPR cell 0.58 >More info 0.77 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
8 Split KNO3 roots - 8hours 0.71 >More info 0.58 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
9 20m.KNO3 0.71 >More info 0.57 >More info To. KNO3 14 day old Roots Original data GEO bulk
10 afb3-1 2h KNO3 -0.68 >More info -0.59 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
11 2hr transitory KNO3 PrR cell 0.62 >More info 0.65 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
12 phr1 Shoot-Pi -0.74 >More info -0.52 >More info WT Root-Pi shoots Original data GEO bulk
13 WT Seedling BL -0.75 >More info -0.49 >More info WT Seedling Dark Original data GEO bulk
14 Col-0 low oxygen 0.75 >More info 0.49 >More info Col-0 Original data GEO bulk
15 Dark 4 h pls RedLight 1min -0.62 >More info -0.61 >More info Dark 4 h Original data Light treatments
16 myb61 xylem 0.51 >More info 0.71 >More info wt xylem xylem Original data GEO bulk
17 2hr continuous KNO3 PrR cell 0.52 >More info 0.69 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
18 WT Nitrate 0.5h 0.66 >More info 0.55 >More info WT untreated Original data GEO bulk
19 12m.KNO3 0.61 >More info 0.59 >More info To. KNO3 14 day old Roots Original data GEO bulk
20 Col0-PsmES4326-24hpi 0.57 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
21 T101D 10mM NH4NO3 0.60 >More info 0.58 >More info col 10mM NH4NO3 Root Original data
22 Laer pretreat GA Flg22 1h 0.47 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
23 2hr transitory KNO3 SR cell 0.68 >More info 0.45 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
24 1.5 hr nitrate 0.59 >More info 0.53 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
25 Col 8h 0.59 >More info 0.53 >More info Col CA Leaves Original data
26 phr1 phl1 Root-Pi 0.76 >More info 0.33 >More info WT Shoot+Pi roots Original data GEO bulk
27 WT flg22 2h 0.55 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
28 cop1 Seedling Dark -0.67 >More info -0.41 >More info WT Seedling Dark Original data GEO bulk
29 9m.KNO3 0.63 >More info 0.45 >More info To. KNO3 14 day old Roots Original data GEO bulk
30 bZIP TDNA mutant 0.70 >More info 0.38 >More info Col-WT mature pollen Original data GEO bulk
31 WT Red light 18h -0.63 >More info -0.44 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
32 col-5 DC3000 12h 0.59 >More info 0.46 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
33 DC3000 7h 0.65 >More info 0.39 >More info Mock 7h DC3000 Original data GEO bulk
34 aerial organ callus inducing medium 96 h 0.68 >More info 0.36 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
35 8 hr nitrate 0.56 >More info 0.47 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
36 Rosette leaf No12 -0.58 >More info -0.44 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 pif4pif5 mut dark -0.59 >More info -0.43 >More info WT dark Original data GEO bulk
38 Dark 4 h pls UV-A 5 min -0.55 >More info -0.47 >More info Dark 4 h Original data Light treatments
39 col-5 DC3000-avrRpm 4h 0.59 >More info 0.43 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
40 col-5 hrpA 12h 0.63 >More info 0.39 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
41 TAMM27 roots 2hr KCl control -0.75 >More info -0.27 >More info Col0 roots 2hr KCl control root Original data GEO bulk
42 12m.KCl 0.57 >More info 0.45 >More info To. KCl 14 day old Roots Original data GEO bulk
43 leaf -0.56 >More info -0.45 >More info Control for tissue data leaf Original data GEO bulk
44 ANOXIA -0.50 >More info -0.51 >More info ANOXIA+SUCROSE Original data GEO bulk
45 triploid female excess -0.34 >More info -0.67 >More info tetraploid Original data GEO bulk
46 Pedicels stage15 -0.57 >More info -0.43 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
47 chl1-5 Nitrate 0.5h -0.65 >More info -0.35 >More info WT Nitrate 0.5h Original data GEO bulk
48 Flower (stage12) -0.59 >More info -0.41 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
49 WT light -0.64 >More info -0.36 >More info WT dark Original data GEO bulk
50 Seeds stage3 with siliques -0.59 >More info -0.40 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
51 Expanding leaf -0.57 >More info -0.42 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
52 WT (Ler) CK25 -0.62 >More info -0.37 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
53 CabpBVR2 0.65 >More info 0.33 >More info WT Original data GEO bulk
54 2hr continuous KNO3 SR cell 0.67 >More info 0.30 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
55 Split KNO3 roots - 2hours 0.31 >More info 0.66 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
56 0.5h light (+Lincomycin) 0.51 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
57 Cauline leaves -0.59 >More info -0.37 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
58 nd-1 mock 48 hpi -0.62 >More info -0.33 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
59 EL (leaves 1-2) 14DAS -0.52 >More info -0.43 >More info Control for tissue data Original data GEO bulk
60 WT cotyledons -0.53 >More info -0.42 >More info Control for tissue data cotyledons Original data
61 atr mock 0.59 >More info 0.36 >More info WT mock shoot apical meristem Original data
62 Carpels stage15 -0.54 >More info -0.40 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
63 ML (Mature leaves) 35DAS -0.54 >More info -0.40 >More info Control for tissue data Original data GEO bulk
64 unpollinated pistil -0.54 >More info -0.40 >More info Control for tissue data pistil Original data GEO bulk
65 Ambient CO2 expanding leaf -0.54 >More info -0.40 >More info Control for tissue data expanding leaf Original data
66 Col BTH 0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
67 Shoot apex vegetative &Young leaves -0.53 >More info -0.41 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
68 Norflurazon 0.60 >More info 0.34 >More info Col-0 Original data GEO bulk
69 seedling -0.51 >More info -0.43 >More info Control for tissue data seedling Original data GEO bulk
70 Norflurazon 0.60 >More info 0.34 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
71 Ambient CO2 leaf primordia -0.53 >More info -0.40 >More info Control for tissue data leaf primordia Original data
72 aba2 1% sucrose 12-day-old 0.39 >More info 0.54 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
73 C2H2 ZF TDNA mutant 0.70 >More info 0.23 >More info Col-WT mature pollen Original data GEO bulk
74 Inflorescences ler -0.53 >More info -0.39 >More info Control for tissue data inflorescences Original data GEO bulk
75 flower -0.52 >More info -0.40 >More info Control for tissue data flower Original data GEO bulk
76 siliques -0.55 >More info -0.37 >More info Control for tissue data Original data GEO bulk
77 atmyc2 cop1 Seedling Dark -0.63 >More info -0.29 >More info WT Seedling Dark Original data GEO bulk
78 Col-0 +lincomycin 0.71 >More info 0.21 >More info Col-0 -lincomycin Original data GEO bulk
79 Col0 roots 2hr KNO3 nitrogen 0.71 >More info 0.21 >More info Col0 roots 2hr KCl control root Original data GEO bulk
80 WT(Ler) Rc15 -0.54 >More info -0.37 >More info WT(Ler) Dark Original data GEO bulk
81 Light 4h steady-state -0.53 >More info -0.38 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
82 silique -0.56 >More info -0.35 >More info Control for tissue data silique Original data GEO bulk
83 WT Rc50 -0.55 >More info -0.36 >More info WT Dark red light whole seedling Original data GEO bulk
84 WT(Ler) Rc50 -0.55 >More info -0.36 >More info WT(Ler) Dark Original data GEO bulk
85 pad4-PsmES4326-24hpi -0.59 >More info -0.32 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
86 WR 35S 3h BL -0.57 >More info -0.34 >More info WR 35S 0h BL brassinosteroid root Original data
87 250uM KNO3 20min shoots 0.41 >More info 0.50 >More info 250uM KCL 20min shoots shoots Original data GEO bulk
88 Bud -0.53 >More info -0.37 >More info Control for tissue data pollen grains and tubes Original data
89 Stem 2ndinternode -0.55 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
90 Proximalhalf (leaf7) -0.53 >More info -0.37 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
91 Apex 14DAS -0.50 >More info -0.40 >More info Control for tissue data Original data GEO bulk
92 miR393 0h -0.53 >More info -0.37 >More info WT 0h Leaf tissue Original data GEO bulk
93 Ambient CO2 fully expanded leaf -0.51 >More info -0.39 >More info Control for tissue data fully expanded leaf Original data
94 Cotyledons -0.53 >More info -0.36 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
95 Leaf -0.54 >More info -0.35 >More info Control for tissue data leaf Original data GEO bulk
96 Flowers stage15 -0.51 >More info -0.38 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
97 Petiol (leaf7) -0.52 >More info -0.37 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
98 flower-buds -0.52 >More info -0.37 >More info Control for tissue data Original data GEO bulk
99 Distal half (leaf7) -0.54 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
100 15m.KCl 0.52 >More info 0.37 >More info To. KCl 14 day old Roots Original data GEO bulk
101 Laer pretreat GA+JA Flg22 0h 0.54 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
102 in vivo pollen tube -0.54 >More info -0.34 >More info Control for tissue data pollen tube Original data GEO bulk
103 0h hml 0.52 >More info 0.36 >More info 0h wt Original data
104 WT 3H Cold 0.23 >More info 0.65 >More info WT control Original data GEO bulk
105 35S:MYB28 like miR -0.30 >More info -0.58 >More info WT for miR Original data GEO bulk
106 Leafminer damaged seedlings 0.31 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
107 Rosette leaf No2 -0.52 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
108 Protoplast Induced 0.30 >More info 0.57 >More info Uninduced Original data GEO bulk
109 chalazal endosperm linear-cotyledon 0.59 >More info 0.27 >More info whole seeds linear-cotyledon Original data GEO bulk
110 Light 4h polysome-bound -0.51 >More info -0.35 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
111 Col 3d 0.59 >More info 0.27 >More info Col CA Leaves Original data
112 Cs root -0.65 >More info -0.21 >More info control root Original data GEO bulk
113 2hr continuous KNO3 PeR cell 0.65 >More info 0.21 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
114 Cor 10h 0.72 >More info 0.14 >More info Mock 10h Cor Original data GEO bulk
115 Laer pretreat GA+JA Flg22 2h 0.55 >More info 0.30 >More info Laer pretreat water control leaf discs Original data GEO bulk
116 rosette Light Wounded 0.30 >More info 0.55 >More info rosette Light Control Original data GEO bulk
117 Laer pretreat GA+JA Flg22 1h 0.60 >More info 0.25 >More info Laer pretreat water control leaf discs Original data GEO bulk
118 clf-28 swn-7 0.62 >More info 0.23 >More info Col whole plant Original data GEO bulk
119 vte1-1 1d vernalization 0.63 >More info 0.22 >More info WT 1d vernalization Original data GEO bulk
120 1hr-pH4.5 0.52 >More info 0.32 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
121 Dark 40min pls UV-AB 5min -0.67 >More info -0.17 >More info Dark 45 min Original data Light treatments
122 Nuclear GSH1 0.57 >More info 0.27 >More info Cytoplasmic GSH1 Control Original data GEO bulk
123 IAA7mII over-expressor IAA Treated 0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
124 Root -Cs -0.64 >More info -0.19 >More info Control-root Original data GEO bulk
125 whole roots -Fe 12 hour -0.55 >More info -0.28 >More info whole roots standard Original data GEO bulk
126 atr zebularine 0.55 >More info 0.28 >More info WT zebularine shoot apical meristem Original data
127 per1 in control medium 0.62 >More info 0.20 >More info Col in control medium root Original data GEO bulk
128 lec1-1 12 DAF Seed -0.64 >More info -0.18 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
129 2hr transitory KNO3 LRCR cell 0.64 >More info 0.18 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
130 light -0.64 >More info -0.18 >More info dark light seedling Original data GEO bulk
131 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.54 >More info -0.28 >More info 2d dark-grown WT seedling Original data GEO bulk
132 FLIGHT TAGESB plate 0.52 >More info 0.30 >More info GROUND CONTROL TAGESB plate Original data
133 slr-1 0h NAA 0.60 >More info 0.22 >More info Col-0 0h NAA Original data GEO bulk
134 E.coli TUV86 2 fliC 7h 0.55 >More info 0.26 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
135 ahg1-1 0.63 >More info 0.18 >More info ABA control Original data GEO bulk
136 C58 35dpi 0.60 >More info 0.21 >More info Reference 35dpi wounded inflorescence stalk segments Original data GEO bulk
137 etiolated cop1BBX22-GFPox -0.53 >More info -0.27 >More info etiolated Col-0 whole seedlings Original data GEO bulk
138 pif4pif5 mut 1h FR -0.51 >More info -0.29 >More info WT 1h FR Original data GEO bulk
139 rid4 IBA -0.66 >More info -0.14 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
140 Col light-dark EtOH 0.50 >More info 0.30 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
141 Dark 4 h pls UV-AB 5min -0.56 >More info -0.24 >More info Dark 4 h Original data Light treatments
142 CMP 24hr 0.57 >More info 0.23 >More info Acetone 24hr root Original data GEO bulk
143 WT 24h cold 0.59 >More info 0.20 >More info WT warm 24h cold entire aerial part Original data GEO bulk
144 arr10 arr12 0.64 >More info 0.15 >More info DMSO--WT DMSO roots Original data GEO bulk
145 4h light (+Lincomycin) 0.62 >More info 0.17 >More info 4h light (-Lincomycin) seedlings Original data GEO bulk
146 Col-0 norflurazon 0.58 >More info 0.20 >More info Col-0 control Original data GEO bulk
147 npr1-PsmES4326-24hpi -0.58 >More info -0.20 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
148 TAMM27 roots 2hr KNO3 nitrogen -0.65 >More info -0.13 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
149 aerial organ callus inducing medium 48 h 0.54 >More info 0.24 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
150 ced1 -0.61 >More info -0.17 >More info WT PEG 6hr seedlings Original data GEO bulk
151 Mutant lfy-12(shoot apex) -0.61 >More info -0.16 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
152 WR 35S 8h BL -0.53 >More info -0.24 >More info WR 35S 0h BL brassinosteroid root Original data
153 abi3-6 16 DAF Seed -0.54 >More info -0.23 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
154 pif3 Dark 1h -0.55 >More info -0.21 >More info WT Dark 1h etiolated seedling Original data GEO bulk
155 E.coli 0157 H7 7h 0.52 >More info 0.24 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
156 tumour 0.59 >More info 0.17 >More info non-tumor tumour Original data GEO bulk
157 root longitudinal zone-1 -Fe 0.55 >More info 0.21 >More info root longitudinal zone-1 standard Original data GEO bulk
158 Truncated AC2 T2 -0.54 >More info -0.21 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
159 camta1/2 warm -0.59 >More info -0.16 >More info WT 24h cold entire aerial part Original data GEO bulk
160 sicy-192 cotyledons 0.59 >More info 0.15 >More info WT cotyledons cotyledons Original data
161 cngc4 -0.62 >More info -0.12 >More info Ws-2 Seedlings Original data GEO bulk
162 Col-0 C2H4 24h 0.57 >More info 0.17 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
163 24h light (+Lincomycin) 0.54 >More info 0.20 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
164 roots bhlh100/101 0uM Fe -0.56 >More info -0.17 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
165 Col-0 Root 100 mM ATP 30 min -0.72 >More info -0.01 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
166 col-5 hrpA 2h 0.50 >More info 0.23 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
167 Rsch 3d 0.54 >More info 0.19 >More info Rsch CA Leaves Original data
168 WT 6H Cold 0.11 >More info 0.62 >More info WT control Original data GEO bulk
169 ckh2 CK25 -0.51 >More info -0.21 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
170 wrky33 Bc inoculation 14h 0.65 >More info 0.07 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
171 pmr5 pmr6 0.61 >More info 0.11 >More info Col-0 Original data GEO bulk
172 ein2-PsmES4326-24hpi -0.62 >More info -0.10 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
173 SCL3 OE 0.66 >More info 0.06 >More info Col-0 whole root Original data GEO bulk
174 Dark 3day ivd 0.54 >More info 0.18 >More info 0h ivd Original data
175 root - 01% oxygen - 2h -0.63 >More info -0.09 >More info root - 21% oxygen - 2h Original data GEO bulk
176 IPT8 induced 24h -0.61 >More info -0.11 >More info Control 24h 24 hours primary root tip (5 mm) Original data GEO bulk
177 seedlings +5AC 0.57 >More info 0.14 >More info control seedlings 10-day old whole seedling Original data GEO bulk
178 gun1-1 -lincomycin 0.50 >More info 0.21 >More info Col-0 -lincomycin Original data GEO bulk
179 35S:ATR1 like miR -0.17 >More info -0.53 >More info WT for miR Original data GEO bulk
180 Root dark control 7h -0.52 >More info -0.18 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
181 HSP90 Reduced RNAi-C1 0.50 >More info 0.20 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
182 RRE2 Chitin 0.53 >More info 0.16 >More info Chitin Original data GEO bulk
183 mdh 0.59 >More info 0.10 >More info Col Original data GEO bulk
184 nia1nia2noa1-2 0.61 >More info 0.08 >More info Col-0 whole seedlings Original data GEO bulk
185 ARR22-ox (t-zeatin 3 h) 0.51 >More info 0.18 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
186 Genotoxic Stress 3 h (root) -0.56 >More info -0.12 >More info Stress mock 3 h (root) Original data Stress treatments
187 SHR-GR Time 3H Dex -0.53 >More info -0.15 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
188 chalazal seed coat linear-cotyledon 0.53 >More info 0.15 >More info whole seeds linear-cotyledon Original data GEO bulk
189 per1 in Pi deficiency medium 0.54 >More info 0.14 >More info Col in Pi deficiency medium root Original data GEO bulk
190 WT Bc inoculation 14h 0.58 >More info 0.10 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
191 ckh2 CK200 -0.61 >More info -0.07 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
192 agb1 +ABA GC -0.50 >More info -0.17 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
193 axr2-BR -0.50 >More info -0.17 >More info BR BR dark-grown seedlings Original data GEO bulk
194 2hr continuous KNO3 LRCR cell 0.61 >More info 0.06 >More info 2hr KCl control LRCR cell Lateral Root Cap root cells Original data GEO bulk
195 FLIGHT BRIC G PDFU-112 seedlings -0.51 >More info -0.15 >More info GROUNDCONTROL BRIC G PDFU-135 seedlings seedling Original data
196 pif3 Dark 0h -0.52 >More info -0.14 >More info WT Dark 0h etiolated seedling Original data GEO bulk
197 Cor hrpS 10h 0.61 >More info 0.05 >More info Mock 10h Cor hrpS Original data GEO bulk
198 ABA DFPM 0.50 >More info 0.16 >More info control Original data GEO bulk
199 Mutant ag-12(shoot apex) -0.51 >More info -0.15 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
200 Mature callus 0.60 >More info 0.06 >More info Young callus hypocotyls Original data GEO bulk
201 fus3-3 12 DAF Seed -0.55 >More info -0.10 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
202 red illumination +lincomycin 0.62 >More info 0.03 >More info red illumination -lincomycin Original data GEO bulk
203 mtf1-1 -0.57 >More info -0.08 >More info Col0 root Original data
204 20m.KCl 0.51 >More info 0.13 >More info To. KCl 14 day old Roots Original data GEO bulk
205 msh1 albino 0.50 >More info 0.14 >More info WT aerial part Original data GEO bulk
206 afb3-1 2h KCl -0.59 >More info -0.05 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
207 1h light (+Lincomycin) 0.54 >More info 0.10 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
208 WT Root Hypoxia -0.61 >More info -0.03 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
209 Col-0 DCA 6d 0.12 >More info 0.52 >More info Col-0 MOCK 6d Original data GEO bulk
210 Leaf wounded 0.08 >More info 0.56 >More info Leaf control vegetative leaf Original data GEO bulk
211 NJ15 -0.13 >More info -0.51 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
212 ani1 T0.5 -0.56 >More info -0.07 >More info WT T0.5 root tissue Original data GEO bulk
213 AvrRpt2 Col-0 6hpi 0.51 >More info 0.12 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
214 Te 1d 0.52 >More info 0.11 >More info Te CA Leaves Original data
215 ckh2 CK0 -0.53 >More info -0.09 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
216 lec2-1 12 DAF Seed -0.66 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
217 embryo paclobutrazol 0.59 >More info 0.03 >More info embryo-control paclobutrazol embryo Original data GEO bulk
218 Ts5 roots 2hr KNO3 nitrogen -0.66 >More info 0.04 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
219 Control KNO3 roots - 8hours 0.12 >More info 0.50 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
220 ALC Toc1 light-dark EtOH -0.52 >More info -0.09 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
221 Van SA 0.50 >More info 0.11 >More info Col-0 SA Original data GEO bulk
222 WT (Ler) CK200 -0.50 >More info -0.11 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
223 mARF10 -0.51 >More info -0.10 >More info Col-0 Original data GEO bulk
224 Var2-1 roots 2hr KNO3 nitrogen -0.64 >More info 0.03 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
225 npr1-1 SA -0.51 >More info -0.09 >More info Col-0 SA complete seedling Original data
226 2hr transitory KNO3 PeR cell 0.63 >More info -0.03 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
227 root control p35S -0.62 >More info 0.02 >More info root control total control root Original data GEO bulk
228 Light 3day hml -0.61 >More info 0.01 >More info 0h hml Original data
229 dorn1-1 Root 100 mM ATP 30 min 0.67 >More info -0.08 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
230 (Col-0)+200 uM As -0.53 >More info -0.06 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
231 nd-1 V. longisporum-inoculated 48 hpi -0.58 >More info -0.01 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
232 siliques AtHb1 control 0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
233 shoots bhlh100/101 0uM Fe 0.61 >More info -0.03 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
234 oas-a1.1 Cd 24h 0.08 >More info 0.50 >More info Cd 24h root Shoot Original data GEO bulk
235 Elevated CO2 fully expanded leaf 0.50 >More info 0.07 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
236 root - 04% oxygen - 48h -0.53 >More info -0.04 >More info root - 21% oxygen - 48h Original data GEO bulk
237 atmospheric CO2 low Mg shoot 0.52 >More info 0.05 >More info atmospheric CO2 normal Mg shoot Shoot Original data
238 ahg3-1 0.57 >More info 0.00 >More info ABA control Original data GEO bulk
239 ASL9-ox -0.62 >More info 0.05 >More info WT aerial parts of seedlings Original data GEO bulk
240 ABA control 0.55 >More info 0.01 >More info No ABA control Original data GEO bulk
241 Differentiation 12h 0.54 >More info 0.01 >More info Differentiation 0h leaves Original data
242 Fenclorim 4hr 0.52 >More info 0.03 >More info Acetone 4hr root Original data GEO bulk
243 arr10 arr12 tZ 0.54 >More info -0.00 >More info tZ trans-zeatin roots Original data GEO bulk
244 csn4-1 dark 0.54 >More info -0.00 >More info WT light Original data GEO bulk
245 Botrytis cinerea 48h 0.62 >More info -0.09 >More info control 48h Original data GEO bulk
246 rsl4 0.54 >More info -0.01 >More info Col-0 Control root Original data GEO bulk
247 nia1nia2 0.57 >More info -0.04 >More info Col-0 whole seedlings Original data GEO bulk
248 protoplasts T0 [flg22] 0.56 >More info -0.05 >More info protoplasts T0 [CPK] mesophyll protoplasts Original data GEO bulk
249 dor drought 0.51 >More info -0.00 >More info WT drought Original data GEO bulk
250 pvip1 pvip2 seedling 0.53 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
251 embryo ABA 0.54 >More info -0.03 >More info embryo-control ABA embryo Original data GEO bulk
252 roots IAA 0.53 >More info -0.02 >More info roots mock Original data GEO bulk
253 35S:VND7-VP16-GR+CHX 0.50 >More info -0.00 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
254 rdo4 siliques 0.50 >More info -0.00 >More info WT Ler siliques Original data GEO bulk
255 RRE1 -0.51 >More info 0.02 >More info Col C Original data GEO bulk
256 pnp1-1 3h +P 0.64 >More info -0.15 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
257 Mutant arf2-6 (IAA) -0.51 >More info 0.02 >More info Col (IAA) Original data GEO bulk
258 MPK6 ox Root Hypoxia -0.60 >More info 0.11 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
259 cat2-2; 8h switch to ambient CO2 concentrations; 0.03 >More info -0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
260 Polysomal RNA 35S:AtCSP1-FH1 0.16 >More info -0.64 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
261 WT-Dry -0.10 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
262 albino Ds13-2198-1 -0.54 >More info 0.08 >More info control Original data GEO bulk
263 WT 30μM phosphate 8 hours. 0.54 >More info -0.08 >More info WT control (not supplemented). Original data
264 gai Control 0.51 >More info -0.06 >More info Laer Control leaf discs Original data GEO bulk
265 WT roots - Fe 0.51 >More info -0.06 >More info WT roots + Fe Roots Original data GEO bulk
266 entire vegetative rosette -0.52 >More info 0.09 >More info Col-0 Mock WL entire vegetative rosette Original data
267 Heat shock optimum -0.22 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
268 AsAKiin11 T2 0.52 >More info -0.12 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
269 Stem tissue 5 days NAA 0.50 >More info -0.12 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
270 pnp1-1 3h -P 0.51 >More info -0.14 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
271 root - 08% oxygen - 30min 0.58 >More info -0.22 >More info root - 21% oxygen - 30min Original data GEO bulk
272 phyB mutant 16C 10hrs -0.17 >More info 0.53 >More info 16C 10h whole plant excluding roots Original data GEO bulk
273 ckh1 CK200 -0.51 >More info 0.18 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
274 root hypoxia p35S -0.54 >More info 0.23 >More info root hypoxia total hypoxia root Original data GEO bulk
275 seed germinating in countinuous light 24h SL -0.37 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
276 opr3 OPDA 8 h -0.52 >More info 0.24 >More info opr3 0 h Original data GEO bulk
277 35S::RSL4 0.53 >More info -0.27 >More info Col-0 Control root Original data GEO bulk
278 CCA1-ox 6am non-polysomal -0.25 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
279 sfr3 cold 0.56 >More info -0.32 >More info WT-cold aerial tissues Original data GEO bulk
280 shoot hypoxia p35S -0.29 >More info 0.53 >More info shoot hypoxia total Original data GEO bulk
281 3x(m) -0.33 >More info 0.53 >More info 2x two week old seedlings Original data
282 Shoot apex inflorescence (after bolting) -0.48 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
283 bri1-116 -0.56 >More info 0.73 >More info Col seedling Original data GEO bulk