4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Dark 4 h pls UV-AB 5min
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List of experiments correlated with "Dark 4 h pls UV-AB 5min "  Help Download transcriptome of top 30
Score Experiment Correlation from
Dark 4 h pls UV-AB 5min 		Correlation to
Dark 4 h pls UV-AB 5min 		Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Dark 4 h pls UV-AB 5min 1.00 >More info 1.00 >More info Dark 4 h Original data Light treatments
2 Dark 4 h pls UV-A 5 min 0.80 >More info 0.89 >More info Dark 4 h Original data Light treatments
3 Dark 4 h pls RedLight 1min 0.72 >More info 0.90 >More info Dark 4 h Original data Light treatments
4 Light 4h steady-state 0.79 >More info 0.79 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
5 Light 4h polysome-bound 0.79 >More info 0.78 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
6 Red Light 4 h -0.66 >More info -0.82 >More info White Light 4 h Original data Light treatments
7 WT Red light 18h 0.72 >More info 0.75 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
8 Red/FR Light 4 h -0.72 >More info -0.71 >More info FarRed Light 4 h Original data Light treatments
9 Dark 40min pls UV-AB 5min 0.69 >More info 0.69 >More info Dark 45 min Original data Light treatments
10 WT Red light 1h 0.67 >More info 0.66 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
11 csn3-1 dark 0.70 >More info 0.60 >More info WT dark Original data GEO bulk
12 etiolated cop1BBX22-GFPox 0.67 >More info 0.62 >More info etiolated Col-0 whole seedlings Original data GEO bulk
13 FarRed Light 4 h 0.64 >More info 0.65 >More info White Light 4 h Original data Light treatments
14 Blue Light 4 h 0.65 >More info 0.64 >More info White Light 4 h Original data Light treatments
15 Shoot dark control 24h -0.61 >More info -0.67 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
16 WT(Ler) Rc50 0.61 >More info 0.67 >More info WT(Ler) Dark Original data GEO bulk
17 csn5 (csn5a-2 csn5b) dark 0.68 >More info 0.59 >More info WT dark Original data GEO bulk
18 csn4-1 mutant 0.69 >More info 0.57 >More info WT dark Original data GEO bulk
19 Day Time Treatment 0.63 >More info 0.61 >More info Day Time Control 1hr white light pulse aerial rosette Original data
20 35SpBVR3 -0.62 >More info -0.62 >More info WT Original data GEO bulk
21 Shoot dark control 7h -0.56 >More info -0.66 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
22 WT(Ler) Rc15 0.58 >More info 0.64 >More info WT(Ler) Dark Original data GEO bulk
23 WT Rc50 0.58 >More info 0.64 >More info WT Dark red light whole seedling Original data GEO bulk
24 Dark 40 min pls UV-A 5 min 0.54 >More info 0.67 >More info Dark 45 min Original data Light treatments
25 Shoot submergence 24h -0.58 >More info -0.63 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
26 seedling 24h after Gamma atm-1 0.60 >More info 0.60 >More info seedling day 2 unirradiated atm-1 24h Original data
27 oas-a1.1 root 0.50 >More info 0.70 >More info WT-Untreated Root Original data GEO bulk
28 seedling 24h after Gamma WT 0.60 >More info 0.59 >More info seedling day 2 unirradiated WT 24h Original data
29 2d dark-grown WT(Col-0)/1 hr red light 0.58 >More info 0.60 >More info 2d dark-grown WT seedling Original data GEO bulk
30 seedling 1.5h after HZE atm-1 -0.58 >More info -0.58 >More info seedling day 1 unirradiated atm-1 1.5h Original data
31 pif4pif5 mut 1h FR 0.59 >More info 0.55 >More info WT 1h FR Original data GEO bulk
32 Whole root - S 3H 0.58 >More info 0.56 >More info Whole root - S 0H Original data GEO bulk
33 Whole root - S 12H 0.56 >More info 0.58 >More info Whole root - S 0H Original data GEO bulk
34 Dark 44min pls RedLigh 1min 0.43 >More info 0.71 >More info Dark 45 min Original data Light treatments
35 WT light 0.51 >More info 0.58 >More info WT dark Original data GEO bulk
36 det2 light-dark -0.58 >More info -0.50 >More info det2 light light-dark Original data GEO bulk
37 eto1-4 + AVG -0.45 >More info -0.63 >More info eto1-4 whole seedling Original data GEO bulk
38 phyB Dark 0.48 >More info 0.60 >More info WT(Ler) Dark Original data GEO bulk
39 Col-0 WT HL 3h 0.56 >More info 0.51 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
40 phyAphyB Dark -0.45 >More info -0.60 >More info phyB Dark Original data GEO bulk
41 ga1-3 SCL3OE 0.62 >More info 0.42 >More info ga1-3 whole root Original data
42 Night Time Treatment 0.51 >More info 0.52 >More info Night Time Control 1hr white light pulse aerial rosette Original data
43 Pseudomonas -0.46 >More info -0.57 >More info Control pseudomonas treated whole seedling Original data GEO bulk
44 phyABDE Rc50 0.45 >More info 0.58 >More info phyABDE Dark red light whole seedling Original data GEO bulk
45 low CO2 + dark -0.39 >More info -0.64 >More info normal CO2 + light Original data GEO bulk
46 bri1-116 0.29 >More info 0.73 >More info Col seedling Original data GEO bulk
47 WT Seedling BL 0.52 >More info 0.49 >More info WT Seedling Dark Original data GEO bulk
48 CabpBVR2 -0.47 >More info -0.54 >More info WT Original data GEO bulk
49 erf104-ko H2O 4h 0.58 >More info 0.41 >More info Col-0 H2O 4h Original data GEO bulk
50 Dark 1day wt -0.55 >More info -0.44 >More info 0h wt Original data
51 ubc13A -Fe -0.56 >More info -0.43 >More info Col -Fe root Original data GEO bulk
52 WT hypoxia -0.47 >More info -0.52 >More info WT normoxia whole rosette Original data
53 pif4pif5 mut 24h FR 0.37 >More info 0.61 >More info WT 24h FR Original data GEO bulk
54 ptpks2 0.33 >More info 0.65 >More info Col-WT leaves Original data GEO bulk
55 WT (Col) glucose 0.40 >More info 0.58 >More info WT (Col) glucose seedlings Original data GEO bulk
56 Dark 1day hml -0.54 >More info -0.43 >More info 0h hml Original data
57 short 14-degree- 0.35 >More info 0.62 >More info control short Original data GEO bulk
58 pif4pif5 mut dark 0.35 >More info 0.62 >More info WT dark Original data GEO bulk
59 seedling 3h after Gamma WT 0.36 >More info 0.61 >More info seedling day 1 unirradiated WT 3h Original data
60 ahg2-1sid2-2 0.55 >More info 0.41 >More info WT (Col) control Original data GEO bulk
61 gun1gun5 drak pretreated -0.52 >More info -0.44 >More info WT drak pretreated Original data GEO bulk
62 Light 0.5h polysome-bound 0.46 >More info 0.50 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
63 1 h Light Total RNA 0.46 >More info 0.50 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
64 Root -Cs 0.50 >More info 0.45 >More info Control-root Original data GEO bulk
65 Dark 2day wt -0.51 >More info -0.44 >More info 0h wt Original data
66 short 12-degree- 0.36 >More info 0.59 >More info control short Original data GEO bulk
67 Col-0 DCA 6d -0.40 >More info -0.54 >More info Col-0 MOCK 6d Original data GEO bulk
68 Light 0.5h steady-state 0.38 >More info 0.56 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
69 Dark 6h wt -0.52 >More info -0.42 >More info 0h wt Original data
70 gun1-1 +lincomycin 0.35 >More info 0.59 >More info Col-0 +lincomycin Original data GEO bulk
71 6-trichlorophenoxyacetic acid 3 h 0.43 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
72 seedling 1.5h after HZE WT -0.53 >More info -0.39 >More info seedling day 1 unirradiated WT 1.5h Original data
73 Dark 3day wt -0.50 >More info -0.42 >More info 0h wt Original data
74 Dark 6h hml -0.50 >More info -0.41 >More info 0h hml Original data
75 ga1-3 scl3-1 0.55 >More info 0.35 >More info ga1-3 whole root Original data
76 essp3/brm5 mutant 0.50 >More info 0.39 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
77 AtLysM RLK1 mutant water 0.52 >More info 0.36 >More info WT water Original data GEO bulk
78 camta1-2 -0.51 >More info -0.37 >More info Col-0-WT Original data GEO bulk
79 elf3-7-16ºC 0.33 >More info 0.54 >More info WT-16ºC Original data GEO bulk
80 short 17-degree- 0.28 >More info 0.59 >More info control short Original data GEO bulk
81 seed germinating in countinuous light 24h SL 0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
82 FarRed Light 45min -0.25 >More info -0.60 >More info White Light 45min Original data Light treatments
83 5-Triiodobenzoic acid3 h 0.33 >More info 0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
84 aerial organ callus inducing medium 96 h -0.31 >More info -0.53 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
85 NJ15 0.28 >More info 0.56 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
86 35S::PI ap3-3 35S::AP-GR +DEX 0.13 >More info 0.70 >More info 0hr DEX Original data GEO bulk
87 Col-0 DEX Shade -0.51 >More info -0.31 >More info Col-0 DEX WL seedlings Original data
88 G3P 0.29 >More info 0.52 >More info Mock distal leaves Original data GEO bulk
89 root stele pH4.6 0.30 >More info 0.51 >More info root stele pH5.7 Original data GEO bulk
90 Col-0 5dpi 0.29 >More info 0.52 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
91 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.24 >More info 0.57 >More info 2d dark-grown WT seedling Original data GEO bulk
92 Col-0 (t-zeatin 3 h) 0.29 >More info 0.51 >More info Col-0 Original data Cytokinin treatment of seedlings
93 2hr continuous KNO3 ECR cell -0.24 >More info -0.56 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
94 Shoot apex inflorescence (after bolting) 0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
95 long 12-degree- 0.26 >More info 0.50 >More info control long Original data GEO bulk
96 anac017-1 AntimycinA 3h -0.25 >More info -0.51 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
97 A2hsfa1-ox in quadruple mutant 0.22 >More info 0.53 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
98 elf3-7-23ºC 0.18 >More info 0.56 >More info WT-23ºC Original data GEO bulk
99 sex1-3 -0.13 >More info -0.61 >More info Col-WT leaves Original data GEO bulk
100 long 14-degree- 0.22 >More info 0.51 >More info control long Original data GEO bulk
101 tmm1-inflorescence-tips 0.12 >More info 0.61 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
102 xyl-grown cell culture- 1h 1mM Suc 0.18 >More info 0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
103 Shoot -Cs 0.12 >More info 0.58 >More info Control-shoot Original data GEO bulk
104 gacA -0.17 >More info -0.52 >More info PA14 seedlings Original data GEO bulk
105 etiolated cop1 0.63 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
106 12h volatiles Sm. R3089 -0.17 >More info -0.50 >More info 12h untreated whole seedling Original data GEO bulk
107 WT roots - Fe -0.04 >More info -0.54 >More info WT roots + Fe Roots Original data GEO bulk
108 CCA1-ox 6am non-polysomal 0.07 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
109 Shoot submergence 7h -0.55 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
110 Col BTH -0.13 >More info 0.67 >More info Col rosettes Original data GEO bulk
111 IAA7mII over-expressor IAA Treated -0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
112 seedling 3h after HZE WT -0.53 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
113 Col0-PsmES4326-24hpi -0.11 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
114 Laer pretreat GA Flg22 1h -0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
115 polysome mRNA eif3k 0.11 >More info -0.57 >More info polysome mRNA WT aerial part Original data GEO bulk
116 siliques AtHb1 control -0.08 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
117 Heat shock optimum -0.22 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
118 Leafminer damaged seedlings -0.19 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
119 light 0.51 >More info -0.18 >More info dark light seedling Original data GEO bulk
120 Red/FR Light45min -0.22 >More info 0.53 >More info FarRed Light 45min Original data Light treatments