4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on etiolated cop1BBX22-GFPox
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List of experiments correlated with "etiolated cop1BBX22-GFPox"  Help Download transcriptome of top 30
Score Experiment Correlation from
etiolated cop1BBX22-GFPox		 Correlation to
etiolated cop1BBX22-GFPox		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 etiolated cop1BBX22-GFPox 1.00 >More info 1.00 >More info etiolated Col-0 whole seedlings Original data GEO bulk
2 phyB Dark 0.85 >More info 0.85 >More info WT(Ler) Dark Original data GEO bulk
3 phyAphyB Dark -0.85 >More info -0.84 >More info phyB Dark Original data GEO bulk
4 WT(Ler) Rc50 0.84 >More info 0.85 >More info WT(Ler) Dark Original data GEO bulk
5 WT Rc50 0.84 >More info 0.84 >More info WT Dark red light whole seedling Original data GEO bulk
6 WT(Ler) Rc15 0.80 >More info 0.80 >More info WT(Ler) Dark Original data GEO bulk
7 Light 4h polysome-bound 0.80 >More info 0.79 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
8 Light 4h steady-state 0.78 >More info 0.80 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
9 CabpBVR2 -0.76 >More info -0.80 >More info WT Original data GEO bulk
10 WT Red light 18h 0.77 >More info 0.75 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
11 35SpBVR3 -0.74 >More info -0.76 >More info WT Original data GEO bulk
12 WT light 0.74 >More info 0.73 >More info WT dark Original data GEO bulk
13 csn3-1 dark 0.75 >More info 0.71 >More info WT dark Original data GEO bulk
14 csn4-1 mutant 0.76 >More info 0.69 >More info WT dark Original data GEO bulk
15 csn5 (csn5a-2 csn5b) dark 0.75 >More info 0.69 >More info WT dark Original data GEO bulk
16 WT Seedling BL 0.70 >More info 0.74 >More info WT Seedling Dark Original data GEO bulk
17 Red/FR Light 4 h -0.63 >More info -0.78 >More info FarRed Light 4 h Original data Light treatments
18 WT Red light 1h 0.62 >More info 0.72 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
19 cop1 Seedling Dark 0.63 >More info 0.70 >More info WT Seedling Dark Original data GEO bulk
20 bri1-116 0.60 >More info 0.73 >More info Col seedling Original data GEO bulk
21 atmyc2 cop1 Seedling Dark 0.64 >More info 0.67 >More info WT Seedling Dark Original data GEO bulk
22 Light 0.5h polysome-bound 0.53 >More info 0.76 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
23 Dark 4 h pls UV-AB 5min 0.62 >More info 0.67 >More info Dark 4 h Original data Light treatments
24 CCA14 dark late -0.67 >More info -0.59 >More info Col dark late Original data GEO bulk
25 Red Light 4 h -0.56 >More info -0.70 >More info White Light 4 h Original data Light treatments
26 pif4pif5 mut 24h FR 0.60 >More info 0.66 >More info WT 24h FR Original data GEO bulk
27 FarRed Light 4 h 0.47 >More info 0.76 >More info White Light 4 h Original data Light treatments
28 AtGATA2ox 0.61 >More info 0.61 >More info Col seedling Original data GEO bulk
29 2d dark-grown WT(Col-0)/1 hr red light 0.53 >More info 0.68 >More info 2d dark-grown WT seedling Original data GEO bulk
30 Light 0.5h steady-state 0.48 >More info 0.70 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
31 Dark 44min pls RedLigh 1min 0.42 >More info 0.74 >More info Dark 45 min Original data Light treatments
32 cop1 Seedling BL+ABA 0.43 >More info 0.73 >More info WT Seedling BL+ABA Original data GEO bulk
33 prors1-2 leaves 0.53 >More info 0.62 >More info Col-0 leaves leaves Original data
34 erf104-ko H2O 4h 0.61 >More info 0.54 >More info Col-0 H2O 4h Original data GEO bulk
35 Dark 40 min pls UV-A 5 min 0.43 >More info 0.72 >More info Dark 45 min Original data Light treatments
36 Dark 4 h pls RedLight 1min 0.46 >More info 0.69 >More info Dark 4 h Original data Light treatments
37 aerial organ callus inducing medium 96 h -0.54 >More info -0.60 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
38 Full C2 T3 -0.42 >More info -0.72 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
39 2d dark-grown pif1pif3pif4pif5 (pifq) mutant 0.63 >More info 0.49 >More info 2d dark-grown WT seedling Original data GEO bulk
40 phyB Rc50 0.63 >More info 0.48 >More info WT(Ler) Rc50 Original data GEO bulk
41 aerial organ callus inducing medium 48 h -0.57 >More info -0.54 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
42 axr2-BR 0.51 >More info 0.60 >More info BR BR dark-grown seedlings Original data GEO bulk
43 Blue Light 4 h 0.35 >More info 0.76 >More info White Light 4 h Original data Light treatments
44 Dark 4 h pls UV-A 5 min 0.52 >More info 0.58 >More info Dark 4 h Original data Light treatments
45 gun1-1 +lincomycin 0.50 >More info 0.58 >More info Col-0 +lincomycin Original data GEO bulk
46 Red Light 45min -0.30 >More info -0.76 >More info White Light 45min Original data Light treatments
47 aerial organ callus inducing medium 24h -0.54 >More info -0.50 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
48 atmyc2 cop1 Seedling BL 0.54 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
49 phr1 Shoot-Pi 0.60 >More info 0.43 >More info WT Root-Pi shoots Original data GEO bulk
50 Mutant sav3-2 (SH) 0.41 >More info 0.62 >More info Col-0 (SH) Original data GEO bulk
51 sav3-2 shade 0.41 >More info 0.62 >More info Col-0 shade seedlings Original data GEO bulk
52 Dark 40min pls UV-AB 5min 0.45 >More info 0.57 >More info Dark 45 min Original data Light treatments
53 root cortex pH4.6 0.35 >More info 0.67 >More info root cortex pH5.7 Original data GEO bulk
54 Col-0 low oxygen -0.53 >More info -0.48 >More info Col-0 Original data GEO bulk
55 35S::ERF104 H2O 4h 0.61 >More info 0.39 >More info Col-0 H2O 4h Original data GEO bulk
56 axr2 0.36 >More info 0.64 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
57 cop1 Seedling BL 0.54 >More info 0.41 >More info WT Seedling BL Original data GEO bulk
58 pif4pif5 high R/FR 0.44 >More info 0.51 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
59 Mutant cry1 (High Light) -0.38 >More info -0.56 >More info Col-0 (High Light) Original data GEO bulk
60 cry1 high light -0.38 >More info -0.56 >More info Col-O high light Original data GEO bulk
61 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		0.52 >More info 0.42 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
62 etiolated cop1 0.89 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
63 phr1 phl1 Root-Pi -0.52 >More info -0.41 >More info WT Shoot+Pi roots Original data GEO bulk
64 pif4pif5 mut 1h FR 0.43 >More info 0.50 >More info WT 1h FR Original data GEO bulk
65 piffq FR 3h 0.41 >More info 0.50 >More info WT FR 3h whole seedling Original data GEO bulk
66 col-5 DC3000 12h -0.40 >More info -0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
67 abi4-102 -lincomycin -0.54 >More info -0.34 >More info Col-0 -lincomycin Original data GEO bulk
68 Col-0 Root 100 mM ATP 30 min 0.53 >More info 0.35 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
69 low CO2 + dark -0.34 >More info -0.53 >More info normal CO2 + light Original data GEO bulk
70 Seedling KUA1-IOX est -0.26 >More info -0.61 >More info Seedling KUA1-IOX mock Original data
71 seedling -S Exp -0.27 >More info -0.60 >More info seedling FN Exp seedling Original data
72 Laer Flg22(Agrobacterium) 2h 0.34 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
73 cdpk6-yfp 0.32 >More info 0.54 >More info Kan seedlings Original data GEO bulk
74 2d red light grown pif1pif3pif4pif5 (pifq) mutant 0.53 >More info 0.32 >More info 2d red light grown WT(Col-0) seedlings Original data GEO bulk
75 stn7-1 0.33 >More info 0.52 >More info Col-0 rosette leaves Original data GEO bulk
76 TNT-seedlings -0.29 >More info -0.56 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
77 Heat 0.51 >More info 0.33 >More info Control 90 minutes at 38°C. Original data GEO bulk
78 21h-DC3000 avrRpm1 0.17 >More info 0.66 >More info 21h-DC3000 leaves Original data GEO bulk
79 Laer GA 2h 0.31 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
80 2hr continuous KNO3 ECR cell -0.27 >More info -0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
81 seed germinating in countinuous light 24h SL 0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
82 Inflorescences Trp1 0.19 >More info 0.60 >More info Inflorescences ler inflorescences Original data GEO bulk
83 FarRed Light 45min -0.21 >More info -0.56 >More info White Light 45min Original data Light treatments
84 Chemically -0.23 >More info -0.54 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
85 Col leaves 120h LT 0.22 >More info 0.55 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
86 AtLysM RLK1 mutant water 0.52 >More info 0.24 >More info WT water Original data GEO bulk
87 Shoot apex inflorescence (after bolting) 0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
88 Laer pretreat GA+JA Flg22 1h -0.52 >More info -0.23 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 ckh2 CK200 0.25 >More info 0.50 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
90 seedling h S Exp 0.09 >More info 0.66 >More info seedling -S Exp seedling Original data
91 T6 leaf-drought -0.21 >More info -0.52 >More info T6 leaf-well watered Original data GEO bulk
92 WT cold 24h 0.20 >More info 0.53 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
93 erf104-ko Flg22 4h -0.56 >More info -0.16 >More info erf104-ko H2O 4h Original data GEO bulk
94 E.coli 0157 H7 7h -0.22 >More info -0.50 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
95 Ler KAR1 24h seed 0.02 >More info 0.69 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
96 35S::MBF1c -0.17 >More info -0.53 >More info control Original data GEO bulk
97 npr1 -0.15 >More info -0.55 >More info WT(COL) Original data GEO bulk
98 ABA 1 h -0.14 >More info -0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
99 Col leaf scrape 5 dpi -0.50 >More info -0.17 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
100 Laer pretreat GA+JA Flg22 0h -0.50 >More info -0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
101 eto1-4 + AVG -0.15 >More info -0.51 >More info eto1-4 whole seedling Original data GEO bulk
102 EBE-XVE +estradiol 0.13 >More info 0.51 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
103 -Sulfate 24 h -0.03 >More info -0.60 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
104 sfr6 cold 0.12 >More info 0.51 >More info WT cold All aerial tissue Original data GEO bulk
105 WT 30μM phosphate 8 hours. 0.07 >More info 0.54 >More info WT control (not supplemented). Original data
106 IAA7mII over-expressor IAA Treated -0.09 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
107 SHR-GR Time 3H Dex 0.02 >More info -0.62 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
108 light 0.77 >More info -0.18 >More info dark light seedling Original data GEO bulk
109 Col BTH -0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
110 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
111 red illumination +lincomycin -0.04 >More info 0.57 >More info red illumination -lincomycin Original data GEO bulk
112 siliques AtHb1 control -0.02 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
113 12h-DC3000 avrRpm1 0.04 >More info -0.52 >More info 12h-DC3000 leaves Original data GEO bulk
114 ms35 silique stage 7 -0.08 >More info 0.50 >More info Ler 6.7 anther and filament Original data GEO bulk
115 Heat shock optimum -0.30 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
116 Leafminer damaged seedlings -0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
117 Col0-PsmES4326-24hpi -0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
118 Laer pretreat GA Flg22 1h -0.47 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk