4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on axr2-BR
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "axr2-BR"  Help Download transcriptome of top 30
Score Experiment Correlation from
axr2-BR		 Correlation to
axr2-BR		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 axr2-BR 1.00 >More info 1.00 >More info BR BR dark-grown seedlings Original data GEO bulk
2 axr2 0.88 >More info 0.88 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
3 msg2-BR 0.75 >More info 0.82 >More info BR BR dark-grown seedlings Original data GEO bulk
4 msg2 0.66 >More info 0.75 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
5 bri1-116 0.66 >More info 0.73 >More info Col seedling Original data GEO bulk
6 low CO2 + light -0.34 >More info -0.80 >More info normal CO2 + light Original data GEO bulk
7 etiolated cop1BBX22-GFPox 0.60 >More info 0.51 >More info etiolated Col-0 whole seedlings Original data GEO bulk
8 low CO2 + dark -0.45 >More info -0.64 >More info normal CO2 + light Original data GEO bulk
9 root - 04% oxygen - 48h 0.41 >More info 0.65 >More info root - 21% oxygen - 48h Original data GEO bulk
10 4h decapitation 0.36 >More info 0.67 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
11 WT light 0.49 >More info 0.53 >More info WT dark Original data GEO bulk
12 ANOXIA 0.31 >More info 0.69 >More info ANOXIA+SUCROSE Original data GEO bulk
13 Red Light 45min -0.27 >More info -0.70 >More info White Light 45min Original data Light treatments
14 Dark 4 h pls UV-A 5 min 0.34 >More info 0.62 >More info Dark 4 h Original data Light treatments
15 SHR-GR Time 12H Dex 0.41 >More info 0.55 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
16 tfl1-1-16ºC -0.39 >More info -0.56 >More info WT-16ºC Original data GEO bulk
17 IAA 0.5 h -0.35 >More info -0.60 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
18 Dark 4 h pls RedLight 1min 0.25 >More info 0.67 >More info Dark 4 h Original data Light treatments
19 pif4pif5 mut 1h FR 0.39 >More info 0.53 >More info WT 1h FR Original data GEO bulk
20 sfr6 drought 0.29 >More info 0.63 >More info WT drought All aerial tissue Original data GEO bulk
21 Shoot apex inflorescence (after bolting) 0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
22 GST 4 h (leaf) -0.24 >More info -0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
23 Shoot dark control 24h -0.38 >More info -0.53 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
24 ddm1-2 0.38 >More info 0.53 >More info Col-0 plant inflorescence Original data
25 root - 08% oxygen - 48h 0.31 >More info 0.59 >More info root - 21% oxygen - 48h Original data GEO bulk
26 rdr6-15 0.35 >More info 0.54 >More info Col-0 plant inflorescence Original data
27 seedling h S Exp 0.35 >More info 0.54 >More info seedling -S Exp seedling Original data
28 35SpBVR3 -0.31 >More info -0.58 >More info WT Original data GEO bulk
29 detached inflorescences 24h -0.31 >More info -0.57 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
30 FarRed Light 4 h 0.21 >More info 0.66 >More info White Light 4 h Original data Light treatments
31 root - 04% oxygen - 2h 0.10 >More info 0.77 >More info root - 21% oxygen - 2h Original data GEO bulk
32 ddm1-2 rdr6-15 0.35 >More info 0.52 >More info Col-0 plant inflorescence Original data
33 Mutant iaa5_6_19 0.29 >More info 0.58 >More info Col Original data GEO bulk
34 csn5 (csn5a-2 csn5b) dark 0.51 >More info 0.33 >More info WT dark Original data GEO bulk
35 Red/FR Light 4 h -0.33 >More info -0.51 >More info FarRed Light 4 h Original data Light treatments
36 seed germinating in countinuous light 24h SL 0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
37 root - 04% oxygen - 30min 0.25 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
38 35S::MBF1c -0.24 >More info -0.60 >More info control Original data GEO bulk
39 csn3-1 dark 0.51 >More info 0.32 >More info WT dark Original data GEO bulk
40 root epidermis and lateral root cap -S 0.19 >More info 0.63 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
41 2hr continuous KCl and MSX control PeR cell -0.29 >More info -0.53 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
42 21h-DC3000 avrRpm1 0.11 >More info 0.71 >More info 21h-DC3000 leaves Original data GEO bulk
43 Blue Light 4 h 0.16 >More info 0.65 >More info White Light 4 h Original data Light treatments
44 AvrRpm1 2 h (leaf) -0.31 >More info -0.50 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
45 coi1-2 -0.28 >More info -0.53 >More info Col-0 mock Whole seedling Original data GEO bulk
46 Seedling KUA1-IOX est -0.13 >More info -0.67 >More info Seedling KUA1-IOX mock Original data
47 Shoot submergence 24h -0.29 >More info -0.50 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
48 root stele -S 0.20 >More info 0.59 >More info root stele pH5.7 Original data GEO bulk
49 vtc1-1 0.21 >More info 0.58 >More info Col-0 whole plant Original data GEO bulk
50 WT Root Hypoxia 0.19 >More info 0.59 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
51 efr-1 +elf18 10h 0.27 >More info 0.51 >More info WT +elf18 10h elf18 Original data GEO bulk
52 Nicotinamide-53hr -0.21 >More info -0.57 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
53 21h-DC3000 hrpA 0.13 >More info 0.64 >More info 21h-DC3000 leaves Original data GEO bulk
54 WT (Col) glucose 0.14 >More info 0.63 >More info WT (Col) glucose seedlings Original data GEO bulk
55 Red/FR Light45min -0.15 >More info -0.61 >More info FarRed Light 45min Original data Light treatments
56 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
57 Nicotinamide-69hr -0.22 >More info -0.54 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
58 ABA JA 24h -0.19 >More info -0.57 >More info EtOH 24h 24hr Original data GEO bulk
59 GST NPP1 4 h (leaf) -0.22 >More info -0.53 >More info Mock 4 h (leaf) Original data Elicitor treatments
60 Col-0 C2H4 24h -0.24 >More info -0.51 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
61 SCR-GR Time 1H Dex -0.09 >More info -0.66 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
62 WT NAA 1h -0.24 >More info -0.51 >More info WT 0h Leaf tissue Original data GEO bulk
63 HARAP aerobic 0.21 >More info 0.53 >More info WT aerobic aerobic Original data GEO bulk
64 dor drought -0.16 >More info -0.57 >More info WT drought Original data GEO bulk
65 sex1-3 -0.20 >More info -0.53 >More info Col-WT leaves Original data GEO bulk
66 3x(m) -0.14 >More info -0.59 >More info 2x two week old seedlings Original data
67 Col ozone 3h -0.12 >More info -0.60 >More info Col clean-air 3h ozone Original data GEO bulk
68 seedlings-week-old RECA1-overexpressing
transgenic		 -0.21 >More info -0.51 >More info seedlings-week-old Col-0 seedlings Original data
69 Prohexadione 3 h -0.06 >More info -0.65 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
70 myb3 myb3r4d -0.13 >More info -0.58 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
71 bak1-3 +Pep2 10h -0.20 >More info -0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
72 bHLH122 ox 0.19 >More info 0.52 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
73 Col-0 9 hpi A. brassicicola -0.19 >More info -0.52 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
74 shoot hypoxia p35S -0.17 >More info -0.53 >More info shoot hypoxia total Original data GEO bulk
75 shoot control p35S -0.16 >More info -0.54 >More info shoot control total Original data GEO bulk
76 Blue Light 45 min 0.18 >More info 0.52 >More info White Light 45min Original data Light treatments
77 col-5 DC3000 12h -0.17 >More info -0.52 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
78 rosette leaves fdh -0.16 >More info -0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
79 4C 2h(SOIL) -0.16 >More info -0.52 >More info 4C 0h(SOIL) Original data GEO bulk
80 triploid female excess 0.11 >More info 0.56 >More info tetraploid Original data GEO bulk
81 2hr continuous KNO3 ECR cell -0.17 >More info -0.50 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
82 flu dark 8hours/30 minute light -0.14 >More info -0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
83 ptpks2 0.11 >More info 0.54 >More info Col-WT leaves Original data GEO bulk
84 gpa1 -ABA GC 0.14 >More info 0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
85 ABA 1 h -0.05 >More info -0.59 >More info Mock 1 h Original data Basic hormone treatment of seedlings
86 Col-0 (t-zeatin 3 h) 0.11 >More info 0.52 >More info Col-0 Original data Cytokinin treatment of seedlings
87 root - 01% oxygen - 30min 0.03 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
88 pepr1-1 Pepr2-3 untreated 0.09 >More info 0.53 >More info WT untreated untreated Original data GEO bulk
89 root longitudinal zone-1 low sulfur 0.09 >More info 0.52 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
90 35S:ATR1 like miR 0.03 >More info 0.58 >More info WT for miR Original data GEO bulk
91 etiolated cop1 0.55 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
92 amiRAP aerobic 0.09 >More info 0.50 >More info WT aerobic aerobic Original data GEO bulk
93 siliques AtHb1 control 0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
94 Imbibed 1 h (seed) -0.00 >More info -0.58 >More info Dry seed Original data Time course of early seed germination
95 root - 01% oxygen - 2h 0.01 >More info 0.56 >More info root - 21% oxygen - 2h Original data GEO bulk
96 Col BTH -0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
97 root - 08% oxygen - 2h 0.05 >More info 0.51 >More info root - 21% oxygen - 2h Original data GEO bulk
98 20m.KCl -0.02 >More info -0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
99 Heat shock optimum -0.11 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
100 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
101 35S:PCO1 hypoxia 0.03 >More info -0.54 >More info WT hypoxia whole rosette Original data
102 Laer pretreat GA Flg22 1h -0.23 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
103 del1-1 mutant 5d uninfected 0.02 >More info -0.50 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
104 AgNO3 3 h 0.04 >More info -0.51 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
105 MYB46-GR DEX 0.07 >More info -0.51 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
106 Col0-PsmES4326-24hpi -0.19 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
107 Leafminer damaged seedlings -0.15 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
108 6-trichlorophenoxyacetic acid 3 h 0.17 >More info -0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings