4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on low CO2 + dark
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List of experiments correlated with "low CO2 + dark"  Help Download transcriptome of top 30
Score Experiment Correlation from
low CO2 + dark		 Correlation to
low CO2 + dark		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 low CO2 + dark 1.00 >More info 1.00 >More info normal CO2 + light Original data GEO bulk
2 low CO2 + light 0.86 >More info 0.88 >More info normal CO2 + light Original data GEO bulk
3 Shoot dark control 24h 0.88 >More info 0.83 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
4 Shoot dark control 7h 0.88 >More info 0.82 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
5 Shoot submergence 24h 0.87 >More info 0.79 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
6 Col-0 C2H4 24h 0.84 >More info 0.76 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
7 WT (Col) glucose -0.80 >More info -0.79 >More info WT (Col) glucose seedlings Original data GEO bulk
8 WT hypoxia 0.80 >More info 0.77 >More info WT normoxia whole rosette Original data
9 seedling 1.5h after HZE atm-1 0.80 >More info 0.77 >More info seedling day 1 unirradiated atm-1 1.5h Original data
10 detached inflorescences 24h 0.83 >More info 0.74 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
11 high-R:FR bud axillary -0.82 >More info -0.74 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
12 1 h Light Total RNA -0.80 >More info -0.74 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
13 sfr6 drought -0.77 >More info -0.75 >More info WT drought All aerial tissue Original data GEO bulk
14 Day Time Treatment -0.75 >More info -0.77 >More info Day Time Control 1hr white light pulse aerial rosette Original data
15 3x(p) 0.74 >More info 0.78 >More info 2x two week old seedlings Original data
16 leaf blade in FRD 0.79 >More info 0.73 >More info leaf blade in WL leaf blades Original data GEO bulk
17 04h Col-0 -0.78 >More info -0.72 >More info 00h Col-0 Original data GEO bulk
18 35S::MBF1c 0.77 >More info 0.72 >More info control Original data GEO bulk
19 leaf blade in D 0.79 >More info 0.70 >More info leaf blade in WL leaf blades Original data GEO bulk
20 petiole in FRD 0.74 >More info 0.74 >More info petiole in WL petioles Original data GEO bulk
21 Pseudomonas 0.74 >More info 0.74 >More info Control pseudomonas treated whole seedling Original data GEO bulk
22 seedling 1.5h after HZE WT 0.79 >More info 0.66 >More info seedling day 1 unirradiated WT 1.5h Original data
23 petiole in D 0.75 >More info 0.70 >More info petiole in WL petioles Original data GEO bulk
24 4h decapitation -0.68 >More info -0.75 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
25 WT (Col-0) inflorescence drought day 5 0.76 >More info 0.66 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
26 Apex mir-3TCP 14DAS -0.70 >More info -0.72 >More info Apex Col 14DAS Original data GEO bulk
27 det2 light-dark 0.77 >More info 0.64 >More info det2 light light-dark Original data GEO bulk
28 4d red light grown hmr-5 seedlings 0.75 >More info 0.66 >More info 4d red light grown WT(Col-0) seedlings Original data
29 Col ozone 3h 0.65 >More info 0.75 >More info Col clean-air 3h ozone Original data GEO bulk
30 sex1-3 0.64 >More info 0.74 >More info Col-WT leaves Original data GEO bulk
31 rosette leaves fdh 0.70 >More info 0.68 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
32 Nicotinamide-65hr 0.75 >More info 0.63 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
33 spch 0.71 >More info 0.66 >More info Col-0 WT whole seedling Original data GEO bulk
34 WT AntimycinA 3h 0.73 >More info 0.64 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
35 coi1-2 0.68 >More info 0.68 >More info Col-0 mock Whole seedling Original data GEO bulk
36 A2hsfa1-ox in quadruple mutant -0.80 >More info -0.55 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
37 ptpks2 -0.59 >More info -0.76 >More info Col-WT leaves Original data GEO bulk
38 exo70A1 0.78 >More info 0.57 >More info Col-0 whole plant Original data GEO bulk
39 Myzus persicae saliva 0.64 >More info 0.71 >More info Control Original data GEO bulk
40 seedling 24h after Gamma WT -0.69 >More info -0.66 >More info seedling day 2 unirradiated WT 24h Original data
41 aphid saliva treated 0.64 >More info 0.71 >More info control aphid saliva treated leaves Original data GEO bulk
42 Nicotinamide-69hr 0.71 >More info 0.64 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
43 Dark 6h ivd 0.75 >More info 0.60 >More info 0h ivd Original data
44 PNO8 12 h 0.66 >More info 0.68 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
45 +1.6 mM Tween 20 1 h. 0.60 >More info 0.74 >More info +distilled water 1 h. Original data GEO bulk
46 1 h Light IP RNA -0.62 >More info -0.71 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
47 Col-0 WT HL 3h -0.76 >More info -0.57 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
48 rGRF 0.68 >More info 0.65 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
49 seedling 24h after Gamma atm-1 -0.68 >More info -0.65 >More info seedling day 2 unirradiated atm-1 24h Original data
50 camta1-2 0.71 >More info 0.62 >More info Col-0-WT Original data GEO bulk
51 gun4-1 0.68 >More info 0.64 >More info WT Col-0 seedling Original data GEO bulk
52 12h Col-0 -0.76 >More info -0.56 >More info 00h Col-0 Original data GEO bulk
53 edr1 36 h powdery mildew 0.76 >More info 0.56 >More info Col-0 36 h powdery mildew Original data GEO bulk
54 CMV-WT 0.73 >More info 0.59 >More info Mock-At Aerial tissues Original data GEO bulk
55 pif4pif5 mut 1h FR -0.74 >More info -0.58 >More info WT 1h FR Original data GEO bulk
56 Light 4h steady-state -0.72 >More info -0.59 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
57 til1-1 22C 0.71 >More info 0.60 >More info Col-0 22C Original data GEO bulk
58 Dark 1day wt 0.78 >More info 0.53 >More info 0h wt Original data
59 Nicotinamide-73hr 0.71 >More info 0.60 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
60 6h volatiles Sp. HRO-C48 0.62 >More info 0.67 >More info 6h untreated whole seedling Original data GEO bulk
61 Dark 1day hml 0.76 >More info 0.53 >More info 0h hml Original data
62 seedlings-week-old RECA1-overexpressing
transgenic		 0.67 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
63 Dark 1day ivd 0.75 >More info 0.53 >More info 0h ivd Original data
64 Dark 3day wt 0.68 >More info 0.60 >More info 0h wt Original data
65 Dark 2day hml 0.73 >More info 0.55 >More info 0h hml Original data
66 Nicotinamide-89hr 0.69 >More info 0.59 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
67 Seedling-HeatStressed TOTALmRNA 0.70 >More info 0.58 >More info Seedling-control TOTALmRNA seedling Original data
68 Nicotinamide-93hr 0.59 >More info 0.68 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
69 tfl1-1-23ºC 0.77 >More info 0.50 >More info WT-23ºC Original data GEO bulk
70 Light 4h polysome-bound -0.70 >More info -0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
71 cs26 short-day -0.70 >More info -0.57 >More info Leaves-WT-SD leaf Original data GEO bulk
72 Root dark control 24h 0.69 >More info 0.58 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
73 Dark 2day wt 0.72 >More info 0.55 >More info 0h wt Original data
74 root epidermis and lateral root cap -S -0.57 >More info -0.70 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
75 Uniconazole 12 h 0.71 >More info 0.56 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
76 Dark 3day ivd 0.70 >More info 0.56 >More info 0h ivd Original data
77 rGRF3x35S:GIF 0.63 >More info 0.63 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
78 sfr6 control -0.71 >More info -0.55 >More info WT control All aerial tissue Original data GEO bulk
79 Col0-PsmES4326-24hpi 0.65 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
80 Col-0 (t-zeatin 3 h) -0.66 >More info -0.60 >More info Col-0 Original data Cytokinin treatment of seedlings
81 Root submergence 24h 0.66 >More info 0.59 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
82 SCR-GR Time 1H Dex 0.56 >More info 0.69 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
83 aphid infested 0.54 >More info 0.71 >More info control aphid infested Leaves Original data GEO bulk
84 8h-DC3000 avrRpm1 0.67 >More info 0.58 >More info 8h-DC3000 leaves Original data GEO bulk
85 mkk1/mkk2 24h BTH rep 0.66 >More info 0.59 >More info Col-0 24h BTH rep Original data GEO bulk
86 aphid infested 0.54 >More info 0.71 >More info CTR Original data GEO bulk
87 M6PR transgenic leaf 0mM NaCl 0.58 >More info 0.67 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
88 Osmotic Stress 24 h (shoot) 0.63 >More info 0.61 >More info Stress mock 24 h (shoot) Original data Stress treatments
89 Full C2 T2 0.64 >More info 0.60 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
90 pmr5 pmr6 0.64 >More info 0.60 >More info Col-0 Original data GEO bulk
91 Dark 3day hml 0.67 >More info 0.57 >More info 0h hml Original data
92 Dark 6h wt 0.73 >More info 0.51 >More info 0h wt Original data
93 Night Time Treatment -0.61 >More info -0.62 >More info Night Time Control 1hr white light pulse aerial rosette Original data
94 M6PR transgenic 0mM NaCl 0.66 >More info 0.57 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
95 Nicotinamide-49hr 0.62 >More info 0.61 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
96 ABA JA 24h 0.55 >More info 0.68 >More info EtOH 24h 24hr Original data GEO bulk
97 shoot-10 μM DEX- 6 hr 0.64 >More info 0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
98 Seedling-HeatStressed POLYSOMESmRNA 0.66 >More info 0.57 >More info Seedling-control POLYSOMESmRNA seedling Original data
99 RGA-GR-DEX 0.62 >More info 0.61 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
100 08h Col-0 -0.72 >More info -0.51 >More info 00h Col-0 Original data GEO bulk
101 ced1 -0.66 >More info -0.57 >More info WT PEG 6hr seedlings Original data GEO bulk
102 anac017-2 AntimycinA 3h -0.68 >More info -0.54 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
103 Col-0 DCA 6d 0.59 >More info 0.63 >More info Col-0 MOCK 6d Original data GEO bulk
104 hai1-2 low water potential 0.65 >More info 0.57 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
105 Col-0 under 4 days salt 0.63 >More info 0.58 >More info Col-0 under control 4 days salt treatment rosette Original data
106 Root dark control 7h 0.65 >More info 0.56 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
107 Nicotinamide-53hr 0.63 >More info 0.58 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
108 pepr1-1 Pepr2-3 +Pep2 2h -0.62 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
109 Dark 6h hml 0.73 >More info 0.48 >More info 0h hml Original data
110 camta1/2/3 warm 0.69 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
111 35SpBVR3 0.66 >More info 0.55 >More info WT Original data GEO bulk
112 tor mutant glucose 0.66 >More info 0.55 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
113 GST 4 h (leaf) 0.57 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
114 Col BTH 0.53 >More info 0.67 >More info Col rosettes Original data GEO bulk
115 hsfa2 KO -0.66 >More info -0.54 >More info WT (Col-0) whole seedling Original data GEO bulk
116 flu dark 8hours/30 minute light 0.72 >More info 0.48 >More info col dark 8hours/30 minute light Original data GEO bulk
117 21h-DC3000 hrpA -0.60 >More info -0.60 >More info 21h-DC3000 leaves Original data GEO bulk
118 gabaculin 0.57 >More info 0.62 >More info WT Col-0 seedling Original data GEO bulk
119 CHLM overexpression -0.71 >More info -0.48 >More info Col-0 estr green tissue Original data GEO bulk
120 agb1 -ABA LF 0.53 >More info 0.66 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
121 Root submergence 7h 0.65 >More info 0.54 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
122 flu over-tAPX 0.59 >More info 0.60 >More info WT Col Original data GEO bulk
123 6h volatiles Sm. R3089 0.45 >More info 0.74 >More info 6h untreated whole seedling Original data GEO bulk
124 elf3-7-16ºC -0.66 >More info -0.52 >More info WT-16ºC Original data GEO bulk
125 Col-0 shade 0.50 >More info 0.68 >More info Col-0 light seedlings Original data GEO bulk
126 WT H2O2 3h 0.62 >More info 0.55 >More info WT water 3h 3h_H2O2 Original data GEO bulk
127 efr-1 +elf18 10h -0.65 >More info -0.52 >More info WT +elf18 10h elf18 Original data GEO bulk
128 ein2 1% sucrose 14-day-old -0.57 >More info -0.60 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
129 coi1-2 JA 0.56 >More info 0.61 >More info JA Whole seedling Original data GEO bulk
130 erf104-ko H2O 4h -0.70 >More info -0.47 >More info Col-0 H2O 4h Original data GEO bulk
131 tetraploid 0.50 >More info 0.66 >More info diploid Original data GEO bulk
132 30m light -0.56 >More info -0.60 >More info before light whole seedlings Original data GEO bulk
133 cngc4 0.61 >More info 0.55 >More info Ws-2 Seedlings Original data GEO bulk
134 rosette leaves lcr 0.52 >More info 0.64 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
135 SA 4mM 0.50 >More info 0.66 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
136 Osmotic Stress 24 h (root) 0.65 >More info 0.51 >More info Stress mock 24 h (root) Original data Stress treatments
137 CAX1/CAX3 mutant 0.71 >More info 0.45 >More info Col whole plant Original data GEO bulk
138 max3GR24 (1 uM) -0.56 >More info -0.59 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
139 AvrRpm1 2 h (leaf) 0.59 >More info 0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
140 bak1-3 +Pep2 10h 0.62 >More info 0.53 >More info WT +Pep2 10h Pep2 Original data GEO bulk
141 eto1-4 + AVG 0.63 >More info 0.52 >More info eto1-4 whole seedling Original data GEO bulk
142 csn3-1 dark -0.70 >More info -0.45 >More info WT dark Original data GEO bulk
143 12h volatiles Sm. R3089 0.59 >More info 0.55 >More info 12h untreated whole seedling Original data GEO bulk
144 WT Red light 18h -0.63 >More info -0.51 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
145 bHLH122 ox -0.54 >More info -0.60 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
146 TNT-seedlings 0.62 >More info 0.52 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
147 FLIGHT TAGESB plate6 SHOOTS 0.64 >More info 0.50 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
148 Nicotinamide-57hr 0.63 >More info 0.51 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
149 col-5 DC3000 12h 0.57 >More info 0.57 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
150 Col leaves 120h LT -0.68 >More info -0.45 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
151 penta mutant (higher order mutant) 0.67 >More info 0.46 >More info col control (higher order mutant) Original data GEO bulk
152 Nicotinamide-85hr 0.61 >More info 0.52 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
153 axr2 -0.63 >More info -0.50 >More info WT-mock mock dark-grown seedlings Original data GEO bulk
154 WT (Col-0) inflorescence drought day 10 0.66 >More info 0.47 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
155 Col-0 +lincomycin 0.54 >More info 0.59 >More info Col-0 -lincomycin Original data GEO bulk
156 csn5 (csn5a-2 csn5b) dark -0.71 >More info -0.42 >More info WT dark Original data GEO bulk
157 tfl1-1-16ºC 0.58 >More info 0.55 >More info WT-16ºC Original data GEO bulk
158 WT cold -0.65 >More info -0.48 >More info WT control All aerial tissue Original data GEO bulk
159 phyABDE Rc50 -0.65 >More info -0.48 >More info phyABDE Dark red light whole seedling Original data GEO bulk
160 Whole root - S 3H -0.56 >More info -0.57 >More info Whole root - S 0H Original data GEO bulk
161 ABA DFPM 0.60 >More info 0.53 >More info control Original data GEO bulk
162 flu 0.57 >More info 0.55 >More info WT Col Original data GEO bulk
163 GST NPP1 4 h (leaf) 0.51 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
164 MYB12OX/tt4 0.53 >More info 0.59 >More info Col-0 aerial part Original data
165 root stele 40 mM NaCls 0.63 >More info 0.49 >More info root stele Original data GEO bulk
166 hepta mutant (higher order mutant) 0.72 >More info 0.40 >More info col control (higher order mutant) Original data GEO bulk
167 tt4 0.49 >More info 0.63 >More info Col-0 aerial part Original data
168 16h Col-0 -0.69 >More info -0.43 >More info 00h Col-0 Original data GEO bulk
169 Col-Luc WT 3h antimycin A 0.65 >More info 0.46 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
170 oligomycin 4 h 0.62 >More info 0.49 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
171 CMP 4hr 0.59 >More info 0.52 >More info Acetone 4hr root Original data GEO bulk
172 Col-7 Sucrose -0.64 >More info -0.47 >More info col-7 Original data GEO bulk
173 elf3-7-23ºC -0.62 >More info -0.49 >More info WT-23ºC Original data GEO bulk
174 eto1-4 0.59 >More info 0.52 >More info Col-0 whole seedling Original data GEO bulk
175 Dark 4 h pls RedLight 1min -0.53 >More info -0.57 >More info Dark 4 h Original data Light treatments
176 piffq FR 1h -0.67 >More info -0.43 >More info WT FR 1h whole seedling Original data GEO bulk
177 20h Col-0 -0.64 >More info -0.46 >More info 00h Col-0 Original data GEO bulk
178 pad4-PsmES4326-24hpi -0.55 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
179 Nicotinamide-61hr 0.63 >More info 0.47 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
180 msg2-BR -0.57 >More info -0.53 >More info BR BR dark-grown seedlings Original data GEO bulk
181 sdg2 -0.74 >More info -0.36 >More info wt seedling Original data GEO bulk
182 21h-DC3000 avrRpm1 -0.54 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
183 WT light -0.55 >More info -0.55 >More info WT dark Original data GEO bulk
184 Laer treat paclobutrazol (PAC) 0.57 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
185 WT+sucrose -0.51 >More info -0.59 >More info WT+no sugars rosette leaves Original data GEO bulk
186 WT (Col-0) inflorescence drought day 4 0.59 >More info 0.51 >More info WT (Col-0) inflorescence well-watered day 4 Unopen flower buds Original data GEO bulk
187 csn4-1 mutant -0.69 >More info -0.41 >More info WT dark Original data GEO bulk
188 rosettes WT drought 0.64 >More info 0.45 >More info rosettes WT watered Original data GEO bulk
189 35S:RPS4 eds1-2 24h -0.55 >More info -0.54 >More info 35S:RPS4 24h leaves Original data
190 axr2-BR -0.64 >More info -0.45 >More info BR BR dark-grown seedlings Original data GEO bulk
191 cpr5scv1 0.58 >More info 0.51 >More info WT(COL) Original data GEO bulk
192 AFB1 0h 0.53 >More info 0.55 >More info Col 0h Leaf Original data GEO bulk
193 roots bhlh100/101 0uM Fe 0.59 >More info 0.49 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
194 Col-0 red light -0.57 >More info -0.51 >More info Col-0 dark Original data GEO bulk
195 piffq FR 3h -0.61 >More info -0.47 >More info WT FR 3h whole seedling Original data GEO bulk
196 npr1 sni1 ssn2 -0.63 >More info -0.45 >More info npr1 sni1 water water seedling Original data GEO bulk
197 4C 2h(SOIL) 0.52 >More info 0.56 >More info 4C 0h(SOIL) Original data GEO bulk
198 pap1-D/tt4 0.53 >More info 0.55 >More info Col-0 aerial part Original data
199 col-5 hrpA 12h 0.52 >More info 0.56 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
200 root longitudinal zone-1 low sulfur -0.55 >More info -0.53 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
201 COL-0-Fe--shoot -0.69 >More info -0.39 >More info COL-0-Ctrl--shoot shoot Original data
202 IMI 4mM 0.54 >More info 0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
203 pip3 At2g19270 TDNA 9 0.43 >More info 0.65 >More info Col-0 whole plant Original data GEO bulk
204 Leafminer damaged seedlings 0.51 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
205 dde2-2 9 hpi A. brassicicola 0.52 >More info 0.55 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
206 WOX1-1 0.55 >More info 0.52 >More info Col-0 aerial part Original data
207 HSP90 Reduced RNAi-B1 0.53 >More info 0.54 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
208 AmGSTF1 expressor 0.52 >More info 0.55 >More info WT leaf tissue Original data GEO bulk
209 Col-0 overexpressing At1g54160 control -0.58 >More info -0.49 >More info WT no treatement Original data GEO bulk
210 Col-0 DEX Shade 0.58 >More info 0.49 >More info Col-0 DEX WL seedlings Original data
211 At1g54160 ox -0.58 >More info -0.49 >More info Col-0 Original data GEO bulk
212 edr1 18 h powdery mildew 0.60 >More info 0.47 >More info Col-0 18 h powdery mildew Original data GEO bulk
213 dorn1-1 Root 100 mM ATP 30 min -0.55 >More info -0.51 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
214 ahg2-1sid2-2 -0.71 >More info -0.35 >More info WT (Col) control Original data GEO bulk
215 sav3-2 light -0.56 >More info -0.50 >More info Col-0 light seedlings Original data GEO bulk
216 ABA 3 h 0.56 >More info 0.50 >More info Mock 3 h Original data Basic hormone treatment of seedlings
217 mkk1/mkk2 control rep 0.52 >More info 0.54 >More info Col-0 Time 0 rep Original data GEO bulk
218 Mutant sav3-2 (WL) -0.56 >More info -0.50 >More info Col-0 (WL) Original data GEO bulk
219 pmr4-1 powdery mildew 0.53 >More info 0.53 >More info WT powdery mildew uninoculated Original data GEO bulk
220 arp6-10 2h 27 -degree-C -0.59 >More info -0.46 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
221 TA induced 0.54 >More info 0.51 >More info Methanol TA Suspension cells Original data GEO bulk
222 gai Control 0.55 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
223 0h light (+Lincomycin) -0.64 >More info -0.41 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
224 24h light (+Lincomycin) 0.49 >More info 0.56 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
225 Seedling KUA1-IOX est 0.49 >More info 0.56 >More info Seedling KUA1-IOX mock Original data
226 Flagellin 4 h (leaf) 0.47 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
227 Col-0 0h NAA 0.48 >More info 0.57 >More info Col-0 6h MOCK Original data GEO bulk
228 Inflorescence ngaquad -0.60 >More info -0.44 >More info Inflorescence wt Original data GEO bulk
229 WUS-GR DEX 0.57 >More info 0.47 >More info Mock Dexamethasone Original data GEO bulk
230 gpa1 -ABA LF 0.66 >More info 0.38 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
231 Dark 4 h pls UV-A 5 min -0.57 >More info -0.47 >More info Dark 4 h Original data Light treatments
232 Elevated CO2 expanding leaf 0.56 >More info 0.48 >More info Ambient CO2 expanding leaf expanding leaf Original data
233 35S:RPS4 eds1-2 8h -0.55 >More info -0.49 >More info 35S:RPS4 8h leaves Original data
234 Whole root - S 12H -0.57 >More info -0.47 >More info Whole root - S 0H Original data GEO bulk
235 miR393 0h -0.45 >More info -0.59 >More info WT 0h Leaf tissue Original data GEO bulk
236 Nicotinamide-77hr 0.48 >More info 0.56 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
237 root stele -S -0.49 >More info -0.55 >More info root stele pH5.7 Original data GEO bulk
238 Col-0 9 hpi A. brassicicola 0.44 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
239 Nicotinamide-81hr 0.62 >More info 0.41 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
240 whole roots 140 mM NaCl 1 hour 0.54 >More info 0.49 >More info whole roots standard Original data GEO bulk
241 pap1-D 0.63 >More info 0.40 >More info Col-0 aerial part Original data
242 CHLD reduction -0.65 >More info -0.38 >More info Col-0 dex green tissue Original data GEO bulk
243 Col-0 SA 0.53 >More info 0.50 >More info Col-0 Original data GEO bulk
244 CMP 24hr 0.62 >More info 0.41 >More info Acetone 24hr root Original data GEO bulk
245 Dark 4 h pls UV-AB 5min -0.64 >More info -0.39 >More info Dark 4 h Original data Light treatments
246 Transgenic LEC2GR Seedling 1h Dex -0.56 >More info -0.46 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
247 rdr6-15 -0.52 >More info -0.50 >More info Col-0 plant inflorescence Original data
248 ein5-1 ski2-3 0.55 >More info 0.47 >More info Col-0 aerial tissue Original data
249 Cocultivation 8 hrs leaf 0.56 >More info 0.46 >More info Mock cocultivation 8 hrs leaf Leaf Original data
250 camta1/2/3 24h cold 0.60 >More info 0.42 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
251 gun5 norflurazon 0.53 >More info 0.49 >More info gun5 control Original data GEO bulk
252 tt4 UV 0.47 >More info 0.55 >More info UV aerial region Original data GEO bulk
253 Col-0 2HS 0.49 >More info 0.53 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
254 seedling h S Exp -0.44 >More info -0.58 >More info seedling -S Exp seedling Original data
255 whole roots 140 mM NaCl 30 minutes 0.51 >More info 0.50 >More info whole roots standard Original data GEO bulk
256 Propiconazole 12 h 0.58 >More info 0.43 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
257 hog1-7 -0.60 >More info -0.41 >More info wt whole seedling Original data GEO bulk
258 mutant-line774 -0.60 >More info -0.41 >More info WT-control whole plant Original data GEO bulk
259 gun1-9 norflurazon 0.56 >More info 0.44 >More info gun1-9 control Original data GEO bulk
260 rosettes myoox drought 0.55 >More info 0.45 >More info rosettes myoox watered Original data GEO bulk
261 pepr1-1 Pepr2-3 +Pep2 10h -0.60 >More info -0.40 >More info WT +Pep2 10h Pep2 Original data GEO bulk
262 root - 08% oxygen - 48h -0.52 >More info -0.48 >More info root - 21% oxygen - 48h Original data GEO bulk
263 OE WRKY63.3 high light 0.54 >More info 0.46 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
264 Laer pretreat GA Flg22 1h 0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
265 oas-a1.1 root -0.41 >More info -0.59 >More info WT-Untreated Root Original data GEO bulk
266 HSP90 Reduced RNAi-A2 0.47 >More info 0.53 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
267 6 h SL WT -0.57 >More info -0.42 >More info 0 h WT seed Original data
268 nbp35-3/- 0.66 >More info 0.33 >More info WT whole seedling Original data GEO bulk
269 ATR1 OE 0.63 >More info 0.36 >More info WT for ATR1/MYB51 Original data GEO bulk
270 oligomycin 1 h 0.54 >More info 0.45 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
271 short 17-degree- -0.36 >More info -0.63 >More info control short Original data GEO bulk
272 C2 leaf-drought 0.47 >More info 0.52 >More info C2 leaf-well watered Original data GEO bulk
273 NaCl Col 0.46 >More info 0.53 >More info Col Original data GEO bulk
274 35S:GIF 0.56 >More info 0.42 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
275 gun1gun5 drak pretreated 0.52 >More info 0.46 >More info WT drak pretreated Original data GEO bulk
276 mutant-line1135 -0.65 >More info -0.33 >More info WT-control whole plant Original data GEO bulk
277 ulp1c ulp1d +Pto 0.53 >More info 0.45 >More info ulp1c ulp1d mock Original data GEO bulk
278 pvip1 pvip2 0.55 >More info 0.43 >More info Col-0 whole rosettes Original data GEO bulk
279 dorn1-1 Root MES buffer 30 min -0.52 >More info -0.46 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
280 ddm1-12 -0.65 >More info -0.33 >More info wt whole seedling Original data GEO bulk
281 Salt Stress 24 h (root) 0.58 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
282 3x(m) 0.31 >More info 0.67 >More info 2x two week old seedlings Original data
283 AsAKiin11 T2 0.43 >More info 0.55 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
284 35S::HRE2 Aerobic 0.54 >More info 0.43 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
285 2 hr Hypoxia Total RNA 0.58 >More info 0.39 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
286 Col-0 flu HL 3h 0.58 >More info 0.39 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
287 AtMYB30-ox T0 -0.64 >More info -0.33 >More info WT T0 Original data GEO bulk
288 OsSAP11 expressing -0.43 >More info -0.54 >More info WT seedlings Original data GEO bulk
289 gpa1-4/agb1-2 clean-air 3h 0.44 >More info 0.53 >More info Col clean-air 3h clean-air Original data GEO bulk
290 triploid female excess -0.22 >More info -0.75 >More info tetraploid Original data GEO bulk
291 WT (Col-0) inflorescence moderate drought day 10 0.53 >More info 0.43 >More info WT (Col-0) inflorescence well-watered day 0
[C02]		 Unopen flower buds Original data
292 aox1a:rpoTmp MLD stressed -0.53 >More info -0.43 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
293 Leafminer locally damaged thaliana seedlings 0.51 >More info 0.45 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
294 HopZ1a treated ulp1c ulp1d 0.52 >More info 0.44 >More info col Original data GEO bulk
295 Root -K 0.51 >More info 0.45 >More info Control-root Original data GEO bulk
296 Col whole leaf 3dpi 0.33 >More info 0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
297 Dry pre-dawn -0.42 >More info -0.54 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
298 A. thaliana-A. lyrata hybrid -0.43 >More info -0.53 >More info A. thaliana mature leaves before flowering Original data GEO bulk
299 mutant acs6E (single mutant) -0.55 >More info -0.40 >More info col control (single mutant) Original data GEO bulk
300 gai Flg22 2h 0.40 >More info 0.55 >More info Laer Flg22 2h leaf discs Original data GEO bulk
301 Full AC2 T1 -0.52 >More info -0.43 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
302 oas-a1.1 Cd 24h -0.63 >More info -0.32 >More info Cd 24h root Shoot Original data GEO bulk
303 seedlings protease IV 0.53 >More info 0.42 >More info seedlings nontreated control whole seedling Original data
304 hsfa2 KO heat shock -0.51 >More info -0.44 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
305 CMV-A2b mutant 0.63 >More info 0.32 >More info Mock-At Aerial tissues Original data GEO bulk
306 K starvation (root) 0.51 >More info 0.44 >More info Ws (root) Original data GEO bulk
307 ahg2-1 -0.67 >More info -0.27 >More info WT (Col) control Original data GEO bulk
308 agb1 gpa1 -ABA LF 0.54 >More info 0.40 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
309 12h-DC3000 avrRpm1 0.65 >More info 0.29 >More info 12h-DC3000 leaves Original data GEO bulk
310 ms35 silique stage 5 -0.53 >More info -0.41 >More info Ler .5 anther and filament Original data GEO bulk
311 anti-sense for AtAOX1a 0.53 >More info 0.41 >More info WT Original data GEO bulk
312 npr1 sni1 SA 0.58 >More info 0.36 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
313 Paclobutrazol 12 h 0.63 >More info 0.31 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
314 60m light -0.50 >More info -0.44 >More info before light whole seedlings Original data GEO bulk
315 tmm1-inflorescence-tips -0.37 >More info -0.57 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
316 Inflorescences Trp1 -0.33 >More info -0.61 >More info Inflorescences ler inflorescences Original data GEO bulk
317 Mutant bri1 0.56 >More info 0.37 >More info Ws-2 Original data Comparison of plant hormone related mutant
318 Heat 2 days recovery 0.56 >More info 0.37 >More info Mock 2 days recovery seedling Original data GEO bulk
319 6 h SL Attim 17-1 1 -0.54 >More info -0.39 >More info 0 h Attim 17-1 1 seed Original data
320 OsRLCK253 expressing -0.40 >More info -0.53 >More info WT seedlings Original data GEO bulk
321 stn7-1 -0.52 >More info -0.41 >More info Col-0 rosette leaves Original data GEO bulk
322 mbd6 mutant thaliana 10-day-old seedling 0.61 >More info 0.32 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
323 35S::ERF104 H2O 4h -0.61 >More info -0.32 >More info Col-0 H2O 4h Original data GEO bulk
324 AgNO3 3 h 0.52 >More info 0.41 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
325 cov1 cov2 stem Top -0.64 >More info -0.29 >More info WT stem Top stem Top Original data GEO bulk
326 ABA 1 h 0.43 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
327 aerial organ callus inducing medium 48 h 0.41 >More info 0.52 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
328 E.coli 0157 H7 7h 0.36 >More info 0.57 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
329 sfr3 cold 0.53 >More info 0.39 >More info WT-cold aerial tissues Original data GEO bulk
330 CabpBVR2 0.53 >More info 0.39 >More info WT Original data GEO bulk
331 WT 30μM phosphate 8 hours. -0.38 >More info -0.54 >More info WT control (not supplemented). Original data
332 24h SL WT -0.51 >More info -0.41 >More info 0 h WT seed Original data
333 Glyphosate EC50 -0.59 >More info -0.33 >More info Carrier (Glyphosate) Original data GEO bulk
334 Col-0 low oxygen 0.52 >More info 0.39 >More info Col-0 control low oxygen root Original data GEO bulk
335 AtLysM RLK1 mutant water -0.63 >More info -0.28 >More info WT water Original data GEO bulk
336 hen1 -0.64 >More info -0.27 >More info Ler Original data GEO bulk
337 Drought Stress 24 h (shoot) 0.52 >More info 0.39 >More info Stress mock 24 h (shoot) Original data Stress treatments
338 Fenclorim 4hr 0.51 >More info 0.40 >More info Acetone 4hr root Original data GEO bulk
339 4C 24h -0.52 >More info -0.39 >More info 4C 0h Original data GEO bulk
340 siliques AtHb1 control 0.39 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
341 ga1-3 scl3-1 -0.50 >More info -0.41 >More info ga1-3 whole root Original data
342 DVL4 induced 0.59 >More info 0.32 >More info emptyvectordex Original data GEO bulk
343 PRR5-VP 6h light on -0.60 >More info -0.31 >More info WT 6h light on whole plant Original data GEO bulk
344 Ws leaf 100mM NaCl 0.34 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
345 Ws 100mM NaCl 0.34 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
346 UV Stress 24 h (root) 0.50 >More info 0.40 >More info Stress mock 24 h (root) Original data Stress treatments
347 cdpk6-yfp -0.51 >More info -0.39 >More info Kan seedlings Original data GEO bulk
348 frb1 mutant 0.52 >More info 0.38 >More info WT whole seedling Original data GEO bulk
349 Prohexadione 3 h 0.39 >More info 0.51 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
350 cat2-short-day 2d 0.38 >More info 0.52 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
351 0.2µM SMX -0.38 >More info -0.52 >More info control Whole seedling Original data GEO bulk
352 Red Light 45min 0.29 >More info 0.61 >More info White Light 45min Original data Light treatments
353 npr1 sni1 brca2a SA -0.33 >More info -0.57 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
354 vte1-1 3d vernalization -0.55 >More info -0.34 >More info WT 3d vernalization Original data GEO bulk
355 6h +Pi -0.56 >More info -0.33 >More info 6h -Pi root Original data GEO bulk
356 L2.4 mutant -0.54 >More info -0.35 >More info Wt Original data GEO bulk
357 ddm1-2 -0.61 >More info -0.28 >More info Col-0 plant inflorescence Original data
358 dyt1 -0.57 >More info -0.32 >More info WT anther Original data GEO bulk
359 AtMinD1 Temporal-induction 0.57 >More info 0.32 >More info Control whole plant Original data GEO bulk
360 SHR-GR Time 12H Dex -0.58 >More info -0.31 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
361 HSP90 Reduced hsp90.2 0.54 >More info 0.34 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
362 Control KNO3 roots - 8hours 0.56 >More info 0.32 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
363 rosettes atx drought 0.54 >More info 0.34 >More info rosettes atx watered Original data GEO bulk
364 Elevated CO2 AMPLE N NIGHT 0.34 >More info 0.54 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
365 HARAP aerobic -0.52 >More info -0.36 >More info WT aerobic aerobic Original data GEO bulk
366 shl-2 Pool 0.52 >More info 0.36 >More info Ler Pool seedling Original data GEO bulk
367 mkk2 24h BTH rep 0.38 >More info 0.50 >More info Col-0 24h BTH rep Original data GEO bulk
368 cop1 Seedling BL+ABA -0.59 >More info -0.29 >More info WT Seedling BL+ABA Original data GEO bulk
369 4x 0.57 >More info 0.31 >More info 2x two week old seedlings Original data
370 sdg8-2 mutant -0.57 >More info -0.31 >More info wild type leaf Original data GEO bulk
371 etiolated cop1BBX22-GFPox -0.53 >More info -0.34 >More info etiolated Col-0 whole seedlings Original data GEO bulk
372 Shoot submergence 7h 0.87 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
373 miR mutant (higher order mutant) 0.59 >More info 0.28 >More info col control (higher order mutant) Original data GEO bulk
374 aba2 1% sucrose 12-day-old 0.60 >More info 0.27 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
375 ms1 unpollinated 0.57 >More info 0.30 >More info WT 8h-pollinated pistil Original data GEO bulk
376 C24 24h cold -0.57 >More info -0.30 >More info Col 24h cold leaf Original data GEO bulk
377 Differentiation 24h -0.56 >More info -0.30 >More info Differentiation 0h leaves Original data
378 eto1-4 +303 0.52 >More info 0.34 >More info eto1-4 whole seedling Original data GEO bulk
379 short 12-degree- -0.30 >More info -0.56 >More info control short Original data GEO bulk
380 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.58 >More info -0.28 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
381 HSP90 Reduced RNAi-A3 0.36 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
382 npr1 sni1 brca2a -0.51 >More info -0.34 >More info npr1 sni1 water water seedling Original data GEO bulk
383 ebs Pool 0.52 >More info 0.33 >More info Ler Pool seedling Original data GEO bulk
384 essp4/sdg8-5 mutant -0.55 >More info -0.30 >More info wild type leaf Original data GEO bulk
385 rdr6-15 -0.53 >More info -0.32 >More info Col-0 Original data GEO bulk
386 ORS1 induced 0.23 >More info 0.62 >More info mock-induced rosette leaves Original data GEO bulk
387 light -0.66 >More info -0.18 >More info dark light seedling Original data GEO bulk
388 col 24h4c set4 -0.53 >More info -0.31 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
389 essp3/brm5 mutant -0.55 >More info -0.29 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
390 E.coli TUV86 2 fliC 7h 0.31 >More info 0.53 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
391 root cap pGL2 8h BL 0.58 >More info 0.26 >More info root cap pGL2 0h BL brassinosteroid root Original data
392 Differentiation 36h -0.50 >More info -0.33 >More info Differentiation 0h leaves Original data
393 WT zebularine -0.52 >More info -0.31 >More info WT mock shoot apical meristem Original data
394 lib -0.53 >More info -0.30 >More info WT whole seedling Original data GEO bulk
395 Col(gl) leaf 0mM NaCl 0.32 >More info 0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
396 phyB mutant 16C 10hrs -0.29 >More info -0.54 >More info 16C 10h whole plant excluding roots Original data GEO bulk
397 Col(gl) 0mM NaCl 0.32 >More info 0.51 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
398 gpa1-4/agb1-2 ozone 2d -0.29 >More info -0.54 >More info Col ozone 2d ozone Original data GEO bulk
399 sfr2 control -0.60 >More info -0.23 >More info WT control All aerial tissue Original data GEO bulk
400 dor drought 0.24 >More info 0.59 >More info WT drought Original data GEO bulk
401 clf-28 0.54 >More info 0.28 >More info Col whole plant Original data GEO bulk
402 P.p 10.5hai 0.53 >More info 0.29 >More info At-Control roots Original data GEO bulk
403 amiRAP aerobic -0.28 >More info -0.54 >More info WT aerobic aerobic Original data GEO bulk
404 vte2-1 1d vernalization 0.30 >More info 0.52 >More info WT 1d vernalization Original data GEO bulk
405 tZ -0.57 >More info -0.25 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
406 Col whole leaf 5dpi 0.22 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
407 Bay-0-3h IAA 0.52 >More info 0.29 >More info Bay-0-0h IAA whole plant Original data GEO bulk
408 CT101 ozone 0.50 >More info 0.31 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
409 iron minus 0 h 0.61 >More info 0.20 >More info iron +0 h root Original data GEO bulk
410 ulp1c ulp1d 0.66 >More info 0.15 >More info col Original data GEO bulk
411 pif4pif5 mut 24h FR -0.31 >More info -0.50 >More info WT 24h FR Original data GEO bulk
412 AtMinD1 Prolonged-induction 0.59 >More info 0.22 >More info Control whole plant Original data GEO bulk
413 seedling 3h after HZE WT 0.78 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
414 ataf1-1 mutant Col-0 Bgh inoculated 0.28 >More info 0.52 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
415 Col-O high light 0.50 >More info 0.29 >More info Col-O bule light Original data GEO bulk
416 48 h S WT -0.50 >More info -0.29 >More info 0 h WT seed Original data
417 GO5; 8h switch to ambient CO2 concentrations; 0.20 >More info 0.59 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
418 ago4-1 0.58 >More info 0.20 >More info WT La-er whole plants Original data GEO bulk
419 ALC Toc1 light-dark EtOH -0.51 >More info -0.27 >More info Col light-dark EtOH 2.5% ethanol Original data GEO bulk
420 IRP1-OE-Ctrl--shoot -0.52 >More info -0.26 >More info COL-0-Ctrl--shoot shoot Original data
421 T6 leaf-drought 0.18 >More info 0.60 >More info T6 leaf-well watered Original data GEO bulk
422 Apex BLS>>TCP4 14DAS -0.57 >More info -0.21 >More info Apex Col 14DAS Original data GEO bulk
423 Root P recovery 0.57 >More info 0.21 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
424 pip3 At2g19270 RNAi 32 0.50 >More info 0.27 >More info Nd-1 whole plant Original data GEO bulk
425 efr-1 untreated -0.56 >More info -0.21 >More info WT untreated untreated Original data GEO bulk
426 FLIGHT TAGESB plate 0.52 >More info 0.25 >More info GROUND CONTROL TAGESB plate Original data
427 Heat shock optimum 0.12 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
428 Inflorescence miR-NGA -0.56 >More info -0.20 >More info Inflorescence wt Original data GEO bulk
429 35S::HRE2 Hypoxic 0.54 >More info 0.22 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
430 AAF-OX 0.58 >More info 0.18 >More info Col-0 Rosette leaf Original data GEO bulk
431 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
432 pab polysome -0.68 >More info -0.06 >More info WT polysome seedling shoot/aerial seedling Original data
433 hni9 low nitrogen -0.51 >More info -0.23 >More info WT low nitrogen roots Original data GEO bulk
434 cov1 cov2 stem Base 0.60 >More info 0.14 >More info WT stem Base stem Base Original data GEO bulk
435 MYB29 OE -0.52 >More info -0.22 >More info WT for MYB29/76 Original data GEO bulk
436 E.orontii Infection 3 day 0.04 >More info 0.70 >More info Uninfection 3 day Original data Elicitor treatments
437 wavy 0.50 >More info 0.23 >More info WT Original data GEO bulk
438 ga1-3/brm-1 -0.51 >More info -0.22 >More info wt shoots Original data GEO bulk
439 rosette leaves bdg 0.18 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
440 bri1-116 0.00 >More info 0.73 >More info Col seedling Original data GEO bulk
441 aerial organ callus inducing medium 96 h 0.23 >More info 0.50 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
442 myb triple mutant 8h-pollinated ms1 0.56 >More info 0.16 >More info WT 8h-pollinated pistil Original data GEO bulk
443 Ovary -0.51 >More info -0.21 >More info Seedling Original data GEO bulk
444 spx1 spx2 complete -0.59 >More info -0.13 >More info WT complete seedlings Original data
445 Col leaves 48h LT -0.57 >More info -0.15 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
446 arr10 arr12 -0.54 >More info -0.18 >More info DMSO--WT DMSO roots Original data GEO bulk
447 piffq 2d WL -0.59 >More info -0.13 >More info WT 2d WL whole seedling Original data GEO bulk
448 proline -0.50 >More info -0.22 >More info noneHS Original data GEO bulk
449 dcl1-7 -0.62 >More info -0.10 >More info Ler Original data GEO bulk
450 FarRed Light 45min 0.22 >More info 0.50 >More info White Light 45min Original data Light treatments
451 seedling 24h after HZE atm-1 0.50 >More info 0.21 >More info seedling day 2 unirradiated atm-1 24h Original data
452 WT mitomycin C -0.53 >More info -0.18 >More info WT mock shoot apical meristem Original data
453 stele pSHR 3h BL 0.51 >More info 0.20 >More info stele pSHR 0h BL brassinosteroid root Original data
454 Dark 2day ivd 0.72 >More info -0.01 >More info 0h ivd Original data
455 Mutant arf2-6 -0.55 >More info -0.15 >More info Col Original data GEO bulk
456 elevated CO2 low Mg shoot -0.53 >More info -0.17 >More info atmospheric CO2 low Mg shoot Shoot Original data
457 WT resupplied Pi 4h -0.51 >More info -0.19 >More info WT complete seedlings Original data
458 gpa1 -ABA GC -0.15 >More info -0.54 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
459 ein2 mutant roots mock -0.51 >More info -0.18 >More info roots mock Original data GEO bulk
460 lateral root cap-columella pBRN2 3h BL 0.53 >More info 0.15 >More info lateral root cap-columella pBRN2 0h BL brassinosteroid root Original data
461 C58 6dpi -0.51 >More info -0.17 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
462 piffq 3d WL -0.50 >More info -0.18 >More info WT 3d WL whole seedling Original data GEO bulk
463 mutant acs2B (single mutant) -0.53 >More info -0.14 >More info col control (single mutant) Original data GEO bulk
464 WT cold 24h -0.54 >More info -0.12 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
465 estradiole-induced ANAC059 -0.53 >More info -0.13 >More info transgenic (empty vector inducible system) Original data GEO bulk
466 downy mildew cotyledons late stage 0.55 >More info 0.08 >More info mock inoculated Cotyledons Original data GEO bulk
467 IAA Treated -0.50 >More info -0.13 >More info Negative Control Original data GEO bulk
468 NAA 3h -0.51 >More info -0.11 >More info before treatment NAA root Original data GEO bulk
469 GO5; 0h switch to ambient CO2 concentrations; -0.54 >More info -0.08 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
470 FAMA induced 4h -0.09 >More info -0.53 >More info control 4h Whole seedling Original data GEO bulk
471 low R/FR mock spray 0.06 >More info 0.55 >More info high R/FR mock spray low R/FR mock spray Original data GEO bulk
472 etiolated cop1 -0.65 >More info 0.04 >More info etiolated Col-0 whole seedlings Original data GEO bulk
473 MG132 3 h -0.51 >More info -0.08 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
474 Col-0 RNAi-MBS2/mbs1-1 HL 0h -0.50 >More info -0.08 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
475 WT (Col-0) inflorescence drought day 3 -0.50 >More info -0.08 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
476 tcp13 0.51 >More info 0.06 >More info WT inflorescences Original data GEO bulk
477 P.syringae vir 4 h (leaf) 0.03 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
478 siliques WT hypoxia 0.55 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
479 glk1 glk2 GLK1-GR +DEX 4h 0.56 >More info -0.01 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
480 phyB mutant 16C 4hrs 0.54 >More info 0.00 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
481 irradiated leaf (WT 5d) -0.01 >More info -0.53 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
482 4d red light grown hmr-22 seedlings 0.74 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
483 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
484 pab nonpolysome -0.55 >More info 0.03 >More info WT nonpolysome seedling shoot/aerial seedling Original data
485 phyABDE Dark -0.50 >More info -0.01 >More info WT Dark Dark whole seedling Original data GEO bulk
486 WT-16ºC -0.56 >More info 0.06 >More info WT-23ºC Original data GEO bulk
487 Octopus overexpressor 35SDYG25 0.51 >More info -0.02 >More info WS Original data GEO bulk
488 HairpinZ 4 h (leaf) 0.51 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
489 Col-0 DCA 48h -0.52 >More info 0.06 >More info Col-0 MOCK 48h Original data GEO bulk
490 Col PSTDC3000 24h 0.58 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
491 2xX4x interploidy cross -0.55 >More info 0.12 >More info 2xX2x cross Original data GEO bulk
492 seed germinating in countinuous light 24h SL -0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
493 Shoot apex inflorescence (after bolting) -0.28 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
494 Light 3day hml -0.23 >More info 0.60 >More info 0h hml Original data
495 6-trichlorophenoxyacetic acid 3 h -0.34 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
496 2xX6x interploidy cross -0.36 >More info 0.51 >More info 2xX2x cross Original data GEO bulk
497 ARR22-ox -0.52 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings