4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Whole root - S 3H
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List of experiments correlated with "Whole root - S 3H"  Help Download transcriptome of top 30
Score Experiment Correlation from
Whole root - S 3H		 Correlation to
Whole root - S 3H		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Whole root - S 3H 1.00 >More info 1.00 >More info Whole root - S 0H Original data GEO bulk
2 Whole root - S 12H 0.92 >More info 0.89 >More info Whole root - S 0H Original data GEO bulk
3 Whole root - S 24H 0.91 >More info 0.84 >More info Whole root - S 0H Original data GEO bulk
4 Whole root - S 48H 0.89 >More info 0.81 >More info Whole root - S 0H Original data GEO bulk
5 Whole root - S 72H 0.89 >More info 0.71 >More info Whole root - S 0H Original data GEO bulk
6 Ibuprofen 3 h 0.70 >More info 0.75 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
7 PNO8 3 h 0.71 >More info 0.73 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
8 5-Triiodobenzoic acid3 h 0.76 >More info 0.67 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
9 (Ws-2)+100 uM As 0.82 >More info 0.61 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
10 COL-0-Fe--root 0.80 >More info 0.62 >More info COL-0-Ctrl--root root Original data
11 oas-a1.1 root 0.65 >More info 0.77 >More info WT-Untreated Root Original data GEO bulk
12 inhibitor B Treated 0.74 >More info 0.66 >More info Negative Control Original data GEO bulk
13 naxillin 3h 0.78 >More info 0.61 >More info before treatment naxillin root Original data GEO bulk
14 seedling 24h after Gamma atm-1 0.70 >More info 0.68 >More info seedling day 2 unirradiated atm-1 24h Original data
15 Whole root - low pH 24H 0.78 >More info 0.59 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
16 Selenate (root) 0.77 >More info 0.60 >More info Ws (root) Original data GEO bulk
17 Root Selenate 0.77 >More info 0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
18 P-chlorophenoxy- isobutyric acid 3 h 0.63 >More info 0.74 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
19 Day Time Treatment 0.70 >More info 0.65 >More info Day Time Control 1hr white light pulse aerial rosette Original data
20 seedling 24h after Gamma WT 0.69 >More info 0.66 >More info seedling day 2 unirradiated WT 24h Original data
21 Phytoprostane A1 4 h 0.71 >More info 0.63 >More info Col-0 Original data GEO bulk
22 Transgenic LEC2GR Seedling 1h Dex 0.67 >More info 0.65 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
23 bbx24 in Simulated Shade -0.59 >More info -0.73 >More info WT in simulated shade shade seedling Original data
24 plant (Col-0) 4h phytoprostane A1 0.71 >More info 0.61 >More info plant (tga2-5-6) 4h control Original data GEO bulk
25 24h volatiles Sm. R3089 -0.72 >More info -0.59 >More info 24h untreated whole seedling Original data GEO bulk
26 6-trichlorophenoxyacetic acid 3 h 0.66 >More info 0.64 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
27 Chemically 0.56 >More info 0.74 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
28 WT (Col) glucose 0.66 >More info 0.62 >More info WT (Col) glucose seedlings Original data GEO bulk
29 MG132 3 h 0.65 >More info 0.63 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
30 gun1gun5 far-red pretreated -0.70 >More info -0.58 >More info WT far-red pretreated Original data GEO bulk
31 COL-0-Fe--shoot 0.73 >More info 0.54 >More info COL-0-Ctrl--shoot shoot Original data
32 Whole root - low pH 6H 0.78 >More info 0.48 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
33 seedling -S Exp 0.77 >More info 0.49 >More info seedling FN Exp seedling Original data
34 Col-0 WT HL 3h 0.66 >More info 0.59 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
35 NAA 3h 0.79 >More info 0.45 >More info before treatment NAA root Original data GEO bulk
36 35S::PI ap3-3 35S::AP-GR +DEX 0.54 >More info 0.70 >More info 0hr DEX Original data GEO bulk
37 inhibitor A Treated 0.71 >More info 0.53 >More info Negative Control Original data GEO bulk
38 Night Time Treatment 0.59 >More info 0.64 >More info Night Time Control 1hr white light pulse aerial rosette Original data
39 AmGSTF1 expressor -0.65 >More info -0.58 >More info WT leaf tissue Original data GEO bulk
40 R. solani AG8 0.76 >More info 0.47 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
41 ANOXIA -0.51 >More info -0.72 >More info ANOXIA+SUCROSE Original data GEO bulk
42 Glyphosate EC50 0.59 >More info 0.63 >More info Carrier (Glyphosate) Original data GEO bulk
43 Cd 18h root 0.71 >More info 0.49 >More info WT-Untreated Root Original data GEO bulk
44 -Sulfate 2 h 0.62 >More info 0.58 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
45 det2 light-dark -0.69 >More info -0.51 >More info det2 light light-dark Original data GEO bulk
46 plant (tga2-5-6) 4h phytoprostane A1 0.69 >More info 0.51 >More info plant (tga2-5-6) 4h control Original data GEO bulk
47 WT cold 0.60 >More info 0.59 >More info WT control All aerial tissue Original data GEO bulk
48 elf3-7-16ºC 0.62 >More info 0.57 >More info WT-16ºC Original data GEO bulk
49 ga1-3 scl3-1 0.65 >More info 0.53 >More info ga1-3 whole root Original data
50 -Sulfate 24 h 0.64 >More info 0.54 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
51 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.67 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
52 SA 0.70 >More info 0.47 >More info WT mock Whole seedling Original data GEO bulk
53 AgNO3 3 h 0.54 >More info 0.63 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
54 NJ15 0.47 >More info 0.69 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
55 essp4/sdg8-5 mutant 0.75 >More info 0.40 >More info wild type leaf Original data GEO bulk
56 Cocultivation 8 hrs leaf -0.64 >More info -0.51 >More info Mock cocultivation 8 hrs leaf Leaf Original data
57 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.73 >More info 0.42 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
58 col 24h4c set4 0.65 >More info 0.49 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
59 Blue Light 4 h 0.66 >More info 0.48 >More info White Light 4 h Original data Light treatments
60 Dark 4 h pls UV-AB 5min 0.56 >More info 0.58 >More info Dark 4 h Original data Light treatments
61 nia1nia2 0.69 >More info 0.45 >More info Col-0 whole seedlings Original data GEO bulk
62 grf1/grf2/grf3 0.67 >More info 0.46 >More info WS Original data GEO bulk
63 R. solani AG2-1 0.75 >More info 0.38 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
64 ARR22-ox 0.65 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings
65 IAA/inhibitor B Treated 0.56 >More info 0.57 >More info IAA Treated Original data GEO bulk
66 low CO2 + dark -0.57 >More info -0.56 >More info normal CO2 + light Original data GEO bulk
67 amiR-tor induced 3d 0.63 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
68 ptpks2 0.37 >More info 0.76 >More info Col-WT leaves Original data GEO bulk
69 ahg2-1sid2-2 0.54 >More info 0.58 >More info WT (Col) control Original data GEO bulk
70 Shoot dark control 24h -0.62 >More info -0.50 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
71 Pseudomonas -0.50 >More info -0.62 >More info Control pseudomonas treated whole seedling Original data GEO bulk
72 cell culture 4 h phytoprostane A1 0.65 >More info 0.47 >More info cell culture 4 h control Original data GEO bulk
73 penta mutant (higher order mutant) -0.61 >More info -0.51 >More info col control (higher order mutant) Original data GEO bulk
74 whole roots -Fe 72 hour 0.61 >More info 0.50 >More info whole roots standard Original data GEO bulk
75 (Col-0)+100 uM As 0.71 >More info 0.40 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
76 Fe starvation 72 h 0.61 >More info 0.50 >More info Control Original data GEO bulk
77 Shoot dark control 7h -0.60 >More info -0.50 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
78 WT resupplied Pi 4h 0.66 >More info 0.44 >More info WT complete seedlings Original data
79 Dark 40min pls UV-AB 5min 0.57 >More info 0.53 >More info Dark 45 min Original data Light treatments
80 B.cinerea 18 h infection 0.67 >More info 0.43 >More info Mock 18 h Original data Botrytis cinerea infection
81 Botrytis cinerea 18h 0.67 >More info 0.43 >More info control 18h Original data GEO bulk
82 ws 24h4c q8ws 0.64 >More info 0.45 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
83 Differentiation 12h 0.67 >More info 0.42 >More info Differentiation 0h leaves Original data
84 Fenclorim 4hr 0.64 >More info 0.45 >More info Acetone 4hr root Original data GEO bulk
85 Imidazolinone EC50 0.57 >More info 0.52 >More info Carrier (Imidazolinone) Original data GEO bulk
86 npr1 sni1 brca2a 0.58 >More info 0.51 >More info npr1 sni1 water water seedling Original data GEO bulk
87 (Col-0)+200 uM As 0.73 >More info 0.35 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
88 amiR-tor induced 6d 0.70 >More info 0.38 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
89 sdg8-2 mutant 0.69 >More info 0.39 >More info wild type leaf Original data GEO bulk
90 nia1nia2noa1-2 0.60 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
91 Laer pretreat JA Flg22 0h 0.47 >More info 0.61 >More info Laer pretreat water control leaf discs Original data GEO bulk
92 Selenate (shoot) 0.51 >More info 0.56 >More info Ws (shoot) Original data GEO bulk
93 Tsu -Fe 24h Roots 0.52 >More info 0.55 >More info Tsu +Fe 24h Roots Original data GEO bulk
94 60m light 0.53 >More info 0.54 >More info before light whole seedlings Original data GEO bulk
95 Tsu-1 -Fe 24h 0.52 >More info 0.55 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
96 cpctry 0.53 >More info 0.54 >More info Col Original data GEO bulk
97 Shoot Selenate 0.51 >More info 0.56 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
98 Whole root - low pH 3H 0.58 >More info 0.49 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
99 Bur-0-30min IAA 0.59 >More info 0.48 >More info Bur-0h IAA whole plant Original data GEO bulk
100 sid2 -0.52 >More info -0.54 >More info Col rosettes Original data GEO bulk
101 seedling 1.5h after HZE atm-1 -0.54 >More info -0.52 >More info seedling day 1 unirradiated atm-1 1.5h Original data
102 whole roots -Fe 48 hour 0.60 >More info 0.46 >More info whole roots standard Original data GEO bulk
103 IRP1-OE-Ctrl--root 0.56 >More info 0.50 >More info COL-0-Ctrl--root root Original data
104 short 12-degree- 0.34 >More info 0.72 >More info control short Original data GEO bulk
105 Col-7 Sucrose 0.60 >More info 0.45 >More info col-7 Original data GEO bulk
106 dicamba 0.65 >More info 0.40 >More info WT mock whole seedling Original data GEO bulk
107 rao2 H2O2 3h -0.49 >More info -0.56 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
108 mil4 sid2 -0.54 >More info -0.50 >More info Col rosettes Original data GEO bulk
109 Mutant cry1 (High Light) -0.65 >More info -0.39 >More info Col-0 (High Light) Original data GEO bulk
110 Shoot submergence 24h -0.58 >More info -0.46 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
111 cry1 high light -0.65 >More info -0.39 >More info Col-O high light Original data GEO bulk
112 4h decapitation 0.49 >More info 0.55 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
113 max3GR24 (1 uM) 0.59 >More info 0.44 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
114 oas-a1.1 Cd 24h 0.52 >More info 0.51 >More info Cd 24h root Shoot Original data GEO bulk
115 IAA 1h -0.56 >More info -0.47 >More info control 1h root Original data GEO bulk
116 gun1gun5 drak pretreated -0.66 >More info -0.37 >More info WT drak pretreated Original data GEO bulk
117 short 10-degree- 0.36 >More info 0.67 >More info control short Original data GEO bulk
118 sex1-3 -0.55 >More info -0.47 >More info Col-WT leaves Original data GEO bulk
119 long 12-degree- 0.53 >More info 0.49 >More info control long Original data GEO bulk
120 Col-O low light -0.50 >More info -0.52 >More info Col-O bule light Original data GEO bulk
121 Heat no recovery 0.56 >More info 0.46 >More info Mock no recovery seedling Original data GEO bulk
122 root Dosed gold 0.54 >More info 0.48 >More info root No gold .125 mM gold 24 h roots Original data
123 ein2 mutant roots IAA 0.58 >More info 0.44 >More info roots ethylene Original data GEO bulk
124 0.125 mM gold 24 h 0.54 >More info 0.48 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
125 Shoot -Cs 0.42 >More info 0.60 >More info Control-shoot Original data GEO bulk
126 Hydrogen Peroxide 500 uM 0.40 >More info 0.62 >More info Control RB and PER Hydrogen Peroxide Original data
127 tor mutant 0.59 >More info 0.42 >More info WT (Col) none seedlings Original data GEO bulk
128 ABA 3h 0.54 >More info 0.47 >More info EtOH 3h 3hr Original data GEO bulk
129 Root submergence 7h -0.61 >More info -0.40 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
130 FarRed Light 4 h 0.55 >More info 0.45 >More info White Light 4 h Original data Light treatments
131 tetraploid -0.61 >More info -0.39 >More info diploid Original data GEO bulk
132 Wounding Stress3 h (shoot) 0.56 >More info 0.44 >More info Stress mock 3 h (shoot) Original data Stress treatments
133 pepr1-1 Pepr2-3 untreated 0.61 >More info 0.39 >More info WT untreated untreated Original data GEO bulk
134 ubc13A -Fe -0.62 >More info -0.38 >More info Col -Fe root Original data GEO bulk
135 Bur-0-1h IAA 0.66 >More info 0.34 >More info Bur-0h IAA whole plant Original data GEO bulk
136 BI-1-1h IAA 0.70 >More info 0.29 >More info BI-1-0h IAA whole plant Original data GEO bulk
137 IAA/inhibitor A Treated 0.60 >More info 0.39 >More info IAA Treated Original data GEO bulk
138 ein2-1 untreated 0.63 >More info 0.36 >More info WT untreated untreated Original data GEO bulk
139 WT-Dry 0.50 >More info 0.49 >More info WT-CK dehydration treatment 1h Original data
140 Naphthyl- phthalamic acid 3 h 0.54 >More info 0.44 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
141 TNT-seedlings 0.43 >More info 0.55 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
142 WT+H2O2 0.48 >More info 0.50 >More info WT H2O2 Original data GEO bulk
143 Seedling KUA1-IOX est 0.47 >More info 0.51 >More info Seedling KUA1-IOX mock Original data
144 Col-0-1h IAA 0.69 >More info 0.28 >More info Col-0-0h IAA whole plant Original data GEO bulk
145 WT hypoxia -0.60 >More info -0.37 >More info WT normoxia whole rosette Original data
146 cngc4 -0.58 >More info -0.39 >More info Ws-2 Seedlings Original data GEO bulk
147 swn-7 -0.67 >More info -0.30 >More info Col whole plant Original data GEO bulk
148 Col-0 overexpressing At1g54160 control 0.56 >More info 0.40 >More info WT no treatement Original data GEO bulk
149 At1g54160 ox 0.56 >More info 0.40 >More info Col-0 Original data GEO bulk
150 Leaf GLU1-KO 0.54 >More info 0.42 >More info Leaf Col(0) rosette leaves Original data GEO bulk
151 naxillin 6h 0.65 >More info 0.31 >More info before treatment naxillin root Original data GEO bulk
152 ein2 mutant roots mock 0.52 >More info 0.44 >More info roots mock Original data GEO bulk
153 Col0-PsmES4326-24hpi 0.35 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
154 6h volatiles Sp. HRO-C48 -0.67 >More info -0.28 >More info 6h untreated whole seedling Original data GEO bulk
155 Mutant nph4-1_arf19-1 0.55 >More info 0.40 >More info Col Original data GEO bulk
156 Roots Cd -0.68 >More info -0.27 >More info Roots control Cd Root Original data GEO bulk
157 sdg2 0.67 >More info 0.28 >More info wt seedling Original data GEO bulk
158 35S::HRE1 Hypoxic -0.53 >More info -0.42 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
159 FAMA induced 48h 0.74 >More info 0.21 >More info control 48h Whole seedling Original data GEO bulk
160 Col-0 root drought 0.51 >More info 0.44 >More info Col-0 root water root Original data GEO bulk
161 cop1 Seedling BL+ABA 0.54 >More info 0.41 >More info WT Seedling BL+ABA Original data GEO bulk
162 PsJN -0.43 >More info -0.52 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
163 4C 24h 0.45 >More info 0.50 >More info 4C 0h Original data GEO bulk
164 hira-root -0.55 >More info -0.39 >More info WT-root root Original data
165 9 hr Hypoxia 1 hr recovery Total RNA 0.55 >More info 0.39 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
166 atsf1-2 mutant seedling 0.55 >More info 0.39 >More info Col-0 seedling seedlings Original data
167 rosette Dark Wounded 0.52 >More info 0.42 >More info rosette Dark Control Original data GEO bulk
168 Dark 1day hml -0.63 >More info -0.31 >More info 0h hml Original data
169 xyl-grown cell culture- 1h 1mM Glc 0.60 >More info 0.34 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
170 cdkf:1-2 0.60 >More info 0.34 >More info wt seedling young seedlings Original data GEO bulk
171 MYB29 OE 0.57 >More info 0.37 >More info WT for MYB29/76 Original data GEO bulk
172 rcf1-1 cold 12h 0.55 >More info 0.38 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
173 Col in Pi deficiency medium 0.37 >More info 0.56 >More info Col in control medium root Original data GEO bulk
174 Dark 1day ivd -0.64 >More info -0.29 >More info 0h ivd Original data
175 24h volatiles Sp. HRO-C48 -0.63 >More info -0.30 >More info 24h untreated whole seedling Original data GEO bulk
176 seedling 1.5h after Gamma WT 0.57 >More info 0.36 >More info seedling day 1 unirradiated WT 1.5h Original data
177 mutant acs6E (single mutant) 0.51 >More info 0.42 >More info col control (single mutant) Original data GEO bulk
178 gapcp1gapcp2 0.54 >More info 0.38 >More info WT Original data GEO bulk
179 lht1 untreated 0.54 >More info 0.38 >More info WT untreated untreated leaf Original data GEO bulk
180 Differentiation 24h 0.65 >More info 0.27 >More info Differentiation 0h leaves Original data
181 WT+sucrose 0.50 >More info 0.42 >More info WT+no sugars rosette leaves Original data GEO bulk
182 seedling 1.5h after Gamma atm-1 0.56 >More info 0.35 >More info seedling day 1 unirradiated atm-1 1.5h Original data
183 WT Red light 1h 0.52 >More info 0.39 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
184 PAHs stress 0.64 >More info 0.27 >More info exp control phenanthrene whole plants Original data GEO bulk
185 gun1-9 control 0.36 >More info 0.55 >More info Col-0 control Original data GEO bulk
186 vte1-1 3d vernalization 0.59 >More info 0.32 >More info WT 3d vernalization Original data GEO bulk
187 Col-0 mbs1-1 HL 0h 0.50 >More info 0.41 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
188 MIL4 ox -0.50 >More info -0.41 >More info Col Original data GEO bulk
189 Dark 1day wt -0.61 >More info -0.30 >More info 0h wt Original data
190 short 14-degree- 0.32 >More info 0.59 >More info control short Original data GEO bulk
191 Laer pretreat GA Flg22 1h 0.20 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
192 30m light 0.33 >More info 0.58 >More info before light whole seedlings Original data GEO bulk
193 Cocultivation 8 hrs root 0.56 >More info 0.34 >More info Mock cocultivation 8 hrs root Root Original data
194 Apex mir-3TCP 14DAS 0.52 >More info 0.38 >More info Apex Col 14DAS Original data GEO bulk
195 35S:VND7-VP16-GR+CHX 0.37 >More info 0.53 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
196 spx1 spx2 complete 0.61 >More info 0.29 >More info WT complete seedlings Original data
197 WT in -N 0.61 >More info 0.29 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
198 Dark 6h ivd -0.59 >More info -0.31 >More info 0h ivd Original data
199 9 hr Hypoxia 1 hr recovery IP RNA 0.59 >More info 0.31 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
200 vte2 leaves 48h LT 0.57 >More info 0.33 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
201 QK HS 0.55 >More info 0.34 >More info QK control heat shocked seedling Original data GEO bulk
202 sta1 0.51 >More info 0.38 >More info WT Original data GEO bulk
203 Fenclorim 24hr 0.51 >More info 0.38 >More info Acetone 24hr root Original data GEO bulk
204 Mutant iaa5_6_19(IAA) 0.51 >More info 0.38 >More info Col (IAA) Original data GEO bulk
205 WT 1wk -P 0.66 >More info 0.23 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
206 BI-1-3h IAA 0.62 >More info 0.27 >More info BI-1-0h IAA whole plant Original data GEO bulk
207 Cor 24h 0.54 >More info 0.35 >More info Mock 24h Cor Original data GEO bulk
208 Triazolopyrimidine EC50 0.52 >More info 0.37 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
209 WT 90-105 min Xanthomonas 0.51 >More info 0.38 >More info WT T0 Original data GEO bulk
210 hen1 0.58 >More info 0.31 >More info Ler Original data GEO bulk
211 apk1 apk2 0.57 >More info 0.32 >More info Col0-control whole rosette Original data GEO bulk
212 short 17-degree- 0.32 >More info 0.57 >More info control short Original data GEO bulk
213 Propiconazole 3 h 0.50 >More info 0.38 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
214 seedling mSPL13 -0.61 >More info -0.27 >More info seedling Col-0 Original data GEO bulk
215 Root submergence 24h -0.57 >More info -0.31 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
216 seedling 3h after Gamma WT 0.58 >More info 0.30 >More info seedling day 1 unirradiated WT 3h Original data
217 Salt Stress 24 h (shoot) 0.55 >More info 0.32 >More info Stress mock 24 h (shoot) Original data Stress treatments
218 Root dark control 7h -0.54 >More info -0.33 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
219 hepta mutant (higher order mutant) -0.54 >More info -0.33 >More info col control (higher order mutant) Original data GEO bulk
220 WT 3h -P 0.32 >More info 0.55 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
221 seedling 1.5h after HZE WT -0.53 >More info -0.33 >More info seedling day 1 unirradiated WT 1.5h Original data
222 WT no Pi 0.56 >More info 0.30 >More info WT complete seedlings Original data
223 BI-1-30min IAA 0.63 >More info 0.23 >More info BI-1-0h IAA whole plant Original data GEO bulk
224 essp3/brm5 mutant 0.59 >More info 0.27 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
225 Dark 6h hml -0.59 >More info -0.27 >More info 0h hml Original data
226 WT powdery mildew 0.61 >More info 0.25 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
227 Apex mir-319b 17DAS 0.61 >More info 0.25 >More info Apex Col 14DAS Original data GEO bulk
228 DC3000 24h 0.50 >More info 0.36 >More info Mock 24h DC3000 Original data GEO bulk
229 Mutant axr3-1 0.36 >More info 0.50 >More info Col Original data GEO bulk
230 detached inflorescences 24h -0.55 >More info -0.30 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
231 Root dark control 24h -0.56 >More info -0.29 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
232 root epidermis and lateral root cap pH4.6 0.34 >More info 0.51 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
233 Col-0 SA 0.60 >More info 0.25 >More info Col-0 water complete seedling Original data
234 35S::MBF1c -0.57 >More info -0.28 >More info control Original data GEO bulk
235 ebs Pool -0.61 >More info -0.24 >More info Ler Pool seedling Original data GEO bulk
236 Fei-0-1h IAA 0.57 >More info 0.28 >More info Fei-0-0h IAA whole plant Original data GEO bulk
237 cca1-lhy before light -0.63 >More info -0.22 >More info before light whole seedlings Original data GEO bulk
238 PRR5-VP 6h light on 0.57 >More info 0.28 >More info WT 6h light on whole plant Original data GEO bulk
239 Dark 6h wt -0.59 >More info -0.26 >More info 0h wt Original data
240 9m.KCl 0.27 >More info 0.58 >More info To. KCl 14 day old Roots Original data GEO bulk
241 col-5 DC3000-avrRpm 4h 0.53 >More info 0.31 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
242 root cap pGL2 8h BL -0.61 >More info -0.23 >More info root cap pGL2 0h BL brassinosteroid root Original data
243 Col-0 2h NAA 0.65 >More info 0.18 >More info Col-0 6h MOCK Original data GEO bulk
244 Light 4h steady-state 0.50 >More info 0.33 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
245 ALC Toc1 light-light EtOH -0.54 >More info -0.29 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
246 pXVE:HA-EDM2-a untreated -0.30 >More info -0.53 >More info Col-0 untreated seedlings Original data GEO bulk
247 dcl1-7 0.57 >More info 0.26 >More info Ler Original data GEO bulk
248 arp6-10 2h 27 -degree-C 0.54 >More info 0.28 >More info Col-0 2h at 27 ºC whole seedlings Original data GEO bulk
249 P35S:rGRF1 -0.51 >More info -0.31 >More info Col-0 Original data GEO bulk
250 WT mitomycin C 0.51 >More info 0.31 >More info WT mock shoot apical meristem Original data
251 hog1-7 0.50 >More info 0.32 >More info wt whole seedling Original data GEO bulk
252 mutant-line774 0.50 >More info 0.32 >More info WT-control whole plant Original data GEO bulk
253 short 8-degree- 0.32 >More info 0.50 >More info control short Original data GEO bulk
254 Mutant cry1 -0.50 >More info -0.31 >More info Col-0 Original data GEO bulk
255 35S:LOB-GR mock 0.55 >More info 0.26 >More info Col mock mock seedling Original data GEO bulk
256 Col(gl) leaf 100mM NaCl -0.52 >More info -0.29 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
257 DFPM 0.52 >More info 0.29 >More info control Original data GEO bulk
258 Col(gl) 100mM NaCl -0.52 >More info -0.29 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
259 cry1 low light -0.50 >More info -0.31 >More info Col-O low light Original data GEO bulk
260 IRP1-OE-Ctrl--shoot 0.52 >More info 0.29 >More info COL-0-Ctrl--shoot shoot Original data
261 PNO8 12 h -0.29 >More info -0.52 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
262 elf3-7-23ºC 0.31 >More info 0.50 >More info WT-23ºC Original data GEO bulk
263 nbp35-3/- -0.62 >More info -0.18 >More info WT whole seedling Original data GEO bulk
264 CHLD reduction 0.52 >More info 0.28 >More info Col-0 dex green tissue Original data GEO bulk
265 low water potential 0.54 >More info 0.26 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
266 Col-0 DCA 6d -0.29 >More info -0.51 >More info Col-0 MOCK 6d Original data GEO bulk
267 abh1 -ABA 0.30 >More info 0.50 >More info Col-0 -ABA Original data GEO bulk
268 35S:GIF -0.55 >More info -0.24 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
269 csn5 (csn5a-2 csn5b) light 0.51 >More info 0.28 >More info WT light Original data GEO bulk
270 Mutant axr3-1 (IAA) 0.25 >More info 0.54 >More info Col (IAA) Original data GEO bulk
271 npr1-1 SA -0.57 >More info -0.22 >More info Col-0 SA complete seedling Original data
272 Dark 3day hml -0.58 >More info -0.21 >More info 0h hml Original data
273 Elevated CO2 fully expanded leaf 0.51 >More info 0.27 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
274 root protoplasts 40 mM NaCl 0.52 >More info 0.26 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
275 sicy-192 gun1-101 cotyledons 0.53 >More info 0.25 >More info WT cotyledons cotyledons Original data
276 ice1 control 0.50 >More info 0.27 >More info WT control Original data GEO bulk
277 SHR-GR Time 1H Dex 0.54 >More info 0.23 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
278 scl3 0.62 >More info 0.15 >More info Col-0 whole root Original data GEO bulk
279 camta1 leaf water -0.27 >More info -0.50 >More info Col-0 leaf water leaf Original data GEO bulk
280 arr10 arr12 0.50 >More info 0.26 >More info WT Original data GEO bulk
281 Differentiation 36h 0.60 >More info 0.16 >More info Differentiation 0h leaves Original data
282 Col-0 DCA 48h 0.58 >More info 0.18 >More info Col-0 MOCK 48h Original data GEO bulk
283 Col-0 6h NAA 0.54 >More info 0.22 >More info Col-0 6h MOCK Original data GEO bulk
284 leaf blade in D -0.55 >More info -0.21 >More info leaf blade in WL leaf blades Original data GEO bulk
285 Dark 3day wt -0.55 >More info -0.20 >More info 0h wt Original data
286 GRX-overexpression seedlings control 0.50 >More info 0.25 >More info WT seedlings control Seedlings Original data GEO bulk
287 root - 04% oxygen - 2h -0.52 >More info -0.23 >More info root - 21% oxygen - 2h Original data GEO bulk
288 Dark 2day wt -0.55 >More info -0.20 >More info 0h wt Original data
289 IAA7mII over-expressor IAA Treated 0.06 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
290 Full C2 T2 -0.50 >More info -0.24 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
291 Ws seedlings 0.58 >More info 0.15 >More info ged1 seedlings Original data GEO bulk
292 ged1 seedlings -0.58 >More info -0.15 >More info Ws seedlings Original data GEO bulk
293 seed germinating in countinuous light 24h SL 0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
294 phr1 phl1 Shoot-Pi -0.56 >More info -0.16 >More info WT Shoot-Pi shoots Original data GEO bulk
295 rao1-2 0.55 >More info 0.17 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
296 Control KNO3 roots - 8hours -0.57 >More info -0.15 >More info Control KCl roots - 8hours 5mM KNO3 on both sides for 8 hours roots Original data GEO bulk
297 shoots bhlh100/101 0uM Fe 0.57 >More info 0.15 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
298 col-5 hrpA 2h 0.51 >More info 0.21 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
299 Col light-light EtOH 0.53 >More info 0.19 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
300 Whole root - low pH 1H 0.21 >More info 0.51 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
301 WT (Col-0) inflorescence well-watered day 10 -0.54 >More info -0.17 >More info WT (Col-0) inflorescence well-watered day 0 Unopen flower buds Original data GEO bulk
302 des1 water 0.50 >More info 0.21 >More info WT water water leaf Original data GEO bulk
303 aux1 mutant roots air -0.52 >More info -0.19 >More info roots IAA Original data GEO bulk
304 12h-DC3000 avrRpm1 -0.20 >More info -0.51 >More info 12h-DC3000 leaves Original data GEO bulk
305 clf-28 -0.54 >More info -0.16 >More info Col whole plant Original data GEO bulk
306 NaCl cpctry 0.17 >More info 0.53 >More info NaCl Col Original data GEO bulk
307 IBM1 knockout -0.53 >More info -0.16 >More info WT Original data GEO bulk
308 Dark 2day hml -0.52 >More info -0.17 >More info 0h hml Original data
309 WT Shoot-Pi 0.54 >More info 0.15 >More info WT Shoot+Pi shoots Original data GEO bulk
310 arp6-10 12 ºC 0.53 >More info 0.16 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
311 msh1 albino 0.50 >More info 0.19 >More info WT aerial part Original data GEO bulk
312 WT Root-Pi 0.51 >More info 0.17 >More info WT Root+Pi roots Original data GEO bulk
313 Time-0 chr11-1chr17-1 -0.56 >More info -0.12 >More info Time-0 Col-0 leaf explants Original data
314 Red Light 4 h -0.16 >More info -0.52 >More info White Light 4 h Original data Light treatments
315 WT (Ler) TSA 0.50 >More info 0.18 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
316 tbf1-elf18 -0.50 >More info -0.18 >More info WT-elf18 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
317 toc1-1-85hr 0.18 >More info 0.50 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
318 Col ozone 2d 0.51 >More info 0.16 >More info Col clean-air 2d ozone Original data GEO bulk
319 Differentiation 48h 0.55 >More info 0.12 >More info Differentiation 0h leaves Original data
320 rGRF -0.50 >More info -0.15 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
321 Heat shock optimum -0.00 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
322 Col-0 INA 48h 0.50 >More info 0.14 >More info Col-0 MOCK 48h Original data GEO bulk
323 ein2 1% sucrose 14-day-old 0.53 >More info 0.11 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
324 170G5-16 0.52 >More info 0.11 >More info Ler-2 ~600 pooled 7 mm root tips Original data GEO bulk
325 F1 whole seedlings root 0.55 >More info 0.07 >More info Col whole seedlings root Seedlings Original data GEO bulk
326 pab polysome 0.52 >More info 0.10 >More info WT polysome seedling shoot/aerial seedling Original data
327 IAA 8h -0.52 >More info -0.10 >More info control 8h root Original data GEO bulk
328 Leafminer damaged seedlings 0.04 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
329 root - 01% oxygen - 2h -0.56 >More info -0.03 >More info root - 21% oxygen - 2h Original data GEO bulk
330 stn7-1 -0.51 >More info -0.08 >More info Col-0 rosette leaves Original data GEO bulk
331 root longitudinal zone-3 pH 4.6 0.04 >More info 0.52 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
332 Shoot submergence 7h -0.55 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
333 Col-0 24hpi A. brassicicola 0.53 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
334 24h light (+Lincomycin) -0.53 >More info -0.02 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
335 Paclobutrazol 12 h -0.51 >More info -0.03 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
336 tt4 UV -0.02 >More info -0.52 >More info UV aerial region Original data GEO bulk
337 Dark 2day ivd -0.51 >More info -0.01 >More info 0h ivd Original data
338 Shoot apex inflorescence (after bolting) -0.13 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
339 bri1-116 -0.21 >More info 0.73 >More info Col seedling Original data GEO bulk
340 scm 0.50 >More info 0.00 >More info Col Original data GEO bulk
341 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
342 Mutant bri1 -0.50 >More info 0.01 >More info Ws-2 Original data Comparison of plant hormone related mutant
343 Col BTH -0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
344 tcp13 -0.53 >More info 0.10 >More info WT inflorescences Original data GEO bulk
345 cdm1 mutant floral young floral buds 0.51 >More info -0.09 >More info WT floral yound floral buds Unopen flower buds Original data
346 xyl-grown cell culture- 1h 1mM Fru 0.50 >More info -0.15 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
347 siliques AtHb1 control -0.25 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
348 Red/FR Light45min -0.24 >More info 0.50 >More info FarRed Light 45min Original data Light treatments
349 xyl-grown cell culture- 1h 1mM Suc 0.56 >More info -0.31 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data