4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on col-5 hrpA 2h
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List of experiments correlated with "col-5 hrpA 2h"  Help Download transcriptome of top 30
Score Experiment Correlation from
col-5 hrpA 2h		 Correlation to
col-5 hrpA 2h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 col-5 hrpA 2h 1.00 >More info 1.00 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
2 col-5 hrpA 4h 0.88 >More info 0.85 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
3 col-5 DC3000 4h 0.88 >More info 0.84 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
4 col-5 DC3000-avrRpm 4h 0.87 >More info 0.83 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
5 WT flg22 2h 0.86 >More info 0.79 >More info WT 0h Leaf tissue Original data GEO bulk
6 Phaseolicola 2 h (leaf) 0.81 >More info 0.83 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
7 DC3000 2 h (leaf) 0.81 >More info 0.83 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
8 35S::ERF104 Flg22 4h 0.87 >More info 0.77 >More info 35S::ERF104 H2O 4h Original data GEO bulk
9 erf104-ko Flg22 4h 0.87 >More info 0.75 >More info erf104-ko H2O 4h Original data GEO bulk
10 mpk6-ko Flg22 4h 0.83 >More info 0.79 >More info mpk6-ko H2O 4h Original data GEO bulk
11 col-5 hrpA 12h 0.81 >More info 0.80 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
12 E.coli TUV86 2 fliC 7h 0.84 >More info 0.77 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
13 hrcC 0.84 >More info 0.77 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
14 Laer Flg22 2h 0.85 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
15 hrpA 7h 0.83 >More info 0.77 >More info Mock 7h hrpA Original data GEO bulk
16 AvrRpm1 2 h (leaf) 0.82 >More info 0.76 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
17 hrpA fliC 7h 0.83 >More info 0.75 >More info Mock 7h hrpA fliC Original data GEO bulk
18 Laer Flg22 1h 0.81 >More info 0.76 >More info Laer Control leaf discs Original data GEO bulk
19 Col-0 Flg22 4h 0.78 >More info 0.79 >More info Col-0 H2O 4h Original data GEO bulk
20 WT flg22 1h 0.82 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
21 WT NAA/flg 2h 0.83 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
22 GST NPP1 4 h (leaf) 0.84 >More info 0.72 >More info Mock 4 h (leaf) Original data Elicitor treatments
23 AFB1 flg22 2h 0.82 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
24 miR393 flg22 2h 0.81 >More info 0.75 >More info WT 0h Leaf tissue Original data GEO bulk
25 WT NAA/flg 1h 0.83 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
26 Flagellin 4 h (leaf) 0.82 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 Laer Flg22+GA 2h 0.81 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
28 AFB1 flg22 1h 0.81 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
29 E.coli 0157 H7 7h 0.81 >More info 0.73 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
30 miR393 flg22 1h 0.80 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
31 Laer Flg22+GA 1h 0.79 >More info 0.74 >More info Laer Control leaf discs Original data GEO bulk
32 efr-1 +elf18 10h -0.83 >More info -0.70 >More info WT +elf18 10h elf18 Original data GEO bulk
33 DC3000 hrcC 2 h (leaf) 0.77 >More info 0.74 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
34 Laer pretreat GA Flg22 1h 0.79 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
35 Seedling KUA1-IOX est 0.68 >More info 0.81 >More info Seedling KUA1-IOX mock Original data
36 AvrRpt2 Col-0 6hpi 0.77 >More info 0.71 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
37 col-5 DC3000 12h 0.74 >More info 0.73 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
38 seedlings protease IV 0.76 >More info 0.67 >More info seedlings nontreated control whole seedling Original data
39 B.cinerea 18 h infection 0.64 >More info 0.79 >More info Mock 18 h Original data Botrytis cinerea infection
40 Botrytis cinerea 18h 0.64 >More info 0.79 >More info control 18h Original data GEO bulk
41 Col whole leaf 7dpi 0.72 >More info 0.71 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
42 miR393 0h -0.72 >More info -0.70 >More info WT 0h Leaf tissue Original data GEO bulk
43 Laer treat paclobutrazol (PAC) 0.74 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
44 HopZ1a treated 0.77 >More info 0.64 >More info col Original data GEO bulk
45 tunicamycin -0.72 >More info -0.67 >More info DMF Original data GEO bulk
46 WT 2-4h Xanthomonas 0.72 >More info 0.66 >More info WT T0 Original data GEO bulk
47 Col-0 9 hpi A. brassicicola 0.70 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
48 ataf1-1 mutant Col-0 Bgh inoculated 0.68 >More info 0.70 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
49 IMI 4mM 0.70 >More info 0.68 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
50 WT +elf18 2h 0.75 >More info 0.61 >More info WT untreated elf18 Original data GEO bulk
51 WT-elf18 0.78 >More info 0.58 >More info WT-mock infiltration 10 µM elf18 for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
52 WT Col-0 Bgh inoculated 0.67 >More info 0.69 >More info WT Col-0 Un-inoculated Original data GEO bulk
53 ein2-1 9 hpi A. brassicicola 0.67 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
54 Cor 10h 0.74 >More info 0.61 >More info Mock 10h Cor Original data GEO bulk
55 npr1-1 SA -0.73 >More info -0.61 >More info Col-0 SA complete seedling Original data
56 HopZ1a treated ulp1c ulp1d 0.77 >More info 0.57 >More info col Original data GEO bulk
57 pepr1-1 Pepr2-3 +Pep2 2h -0.75 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
58 ulp1c ulp1d +Pto 0.75 >More info 0.58 >More info ulp1c ulp1d mock Original data GEO bulk
59 35S:RPS4 eds1-2 8h -0.66 >More info -0.67 >More info 35S:RPS4 8h leaves Original data
60 dde2-2 9 hpi A. brassicicola 0.69 >More info 0.63 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 WT +elf18 10h 0.74 >More info 0.58 >More info WT untreated elf18 Original data GEO bulk
62 DFPM 0.67 >More info 0.64 >More info control Original data GEO bulk
63 WT 90-105 min Xanthomonas 0.60 >More info 0.71 >More info WT T0 Original data GEO bulk
64 phr1 phl1 Root-Pi 0.71 >More info 0.60 >More info WT Shoot+Pi roots Original data GEO bulk
65 Pto inoculated 0.76 >More info 0.54 >More info col Original data GEO bulk
66 Laer pretreat JA Flg22 1h 0.73 >More info 0.56 >More info Laer pretreat water control leaf discs Original data GEO bulk
67 DC3000 7h 0.63 >More info 0.66 >More info Mock 7h DC3000 Original data GEO bulk
68 Col leaf scrape 5 dpi 0.69 >More info 0.60 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
69 Botrytis cinerea 48h 0.65 >More info 0.64 >More info control 48h Original data GEO bulk
70 Cor hrpS 10h 0.81 >More info 0.48 >More info Mock 10h Cor hrpS Original data GEO bulk
71 Col whole leaf 5dpi 0.64 >More info 0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
72 Col 3d 0.66 >More info 0.62 >More info Col CA Leaves Original data
73 PAHs stress 0.69 >More info 0.59 >More info exp control phenanthrene whole plants Original data GEO bulk
74 anac017-2 AntimycinA 3h -0.66 >More info -0.61 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
75 safener treated 0.69 >More info 0.58 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
76 Col0-PsmES4326-24hpi 0.66 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
77 coi1-16 ein2 sid2 ctrl -0.72 >More info -0.55 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
78 Col-0-avrB-6h 0.66 >More info 0.61 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
79 Laer pretreat JA Flg22 2h 0.76 >More info 0.51 >More info Laer pretreat water control leaf discs Original data GEO bulk
80 Te ozone 0.71 >More info 0.55 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
81 coi1-16 ein2 sid2 ozone 0.75 >More info 0.51 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
82 CMP 24hr 0.65 >More info 0.61 >More info Acetone 24hr root Original data GEO bulk
83 Shoot -K 0.70 >More info 0.56 >More info Control-shoot Original data GEO bulk
84 sid2-2 9 hpi A. brassicicola 0.66 >More info 0.60 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
85 K starvation (shoot) 0.70 >More info 0.56 >More info Ws (shoot) Original data GEO bulk
86 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.72 >More info 0.53 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
87 gpa1-4/agb1-2 clean-air 3h -0.55 >More info -0.70 >More info Col clean-air 3h clean-air Original data GEO bulk
88 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.75 >More info 0.50 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
89 WT powdery mildew 0.60 >More info 0.65 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
90 pad4-PsmES4326-24hpi -0.67 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
91 Col ozone 3h 0.57 >More info 0.67 >More info Col clean-air 3h ozone Original data GEO bulk
92 CT101 ozone 0.72 >More info 0.51 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
93 Differentiation 12h 0.62 >More info 0.61 >More info Differentiation 0h leaves Original data
94 C24 ozone 0.71 >More info 0.52 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
95 Col-0 ozone 0.72 >More info 0.51 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
96 Laer pretreat GA Flg22 0h 0.79 >More info 0.43 >More info Laer pretreat water control leaf discs Original data GEO bulk
97 AZC 0.70 >More info 0.52 >More info noneHS Original data GEO bulk
98 WT roots - Fe 0.58 >More info 0.64 >More info WT roots + Fe Roots Original data GEO bulk
99 flu over-tAPX 0.65 >More info 0.57 >More info WT Col Original data GEO bulk
100 flu 0.63 >More info 0.58 >More info WT Col Original data GEO bulk
101 GST 4 h (leaf) 0.57 >More info 0.64 >More info Mock 4 h (leaf) Original data Elicitor treatments
102 del1-1 mutant 5d uninfected 0.51 >More info 0.69 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
103 Col-0 low oxygen 0.61 >More info 0.59 >More info Col-0 Original data GEO bulk
104 Laer pretreat GA+JA Flg22 1h 0.69 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
105 Fenclorim 4hr 0.59 >More info 0.60 >More info Acetone 4hr root Original data GEO bulk
106 gun1gun5 far-red pretreated -0.58 >More info -0.61 >More info WT far-red pretreated Original data GEO bulk
107 SLWF infested 0.59 >More info 0.60 >More info SLWF uninfested rosette tissue Original data GEO bulk
108 Laer pretreat GA+JA Flg22 2h 0.68 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
109 bZIP1ko mutant N+Light- 0.54 >More info 0.64 >More info WT-sib N+Light- whole plant Original data GEO bulk
110 AsAKiin11 T2 0.60 >More info 0.58 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
111 pvip1 pvip2 0.57 >More info 0.61 >More info Col-0 whole rosettes Original data GEO bulk
112 Col-Luc WT 3h antimycin A 0.60 >More info 0.58 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
113 Laer Alternaria 3dpi -0.62 >More info -0.55 >More info Laer Control leaf discs Original data GEO bulk
114 35S:VND7-VP16-GR+CHX 0.54 >More info 0.63 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
115 IAA7mII over-expressor IAA Treated 0.48 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
116 +1.6 mM Tween 20 1 h. 0.55 >More info 0.61 >More info +distilled water 1 h. Original data GEO bulk
117 wrky33 Bc inoculation 14h 0.71 >More info 0.45 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
118 msh1 albino 0.58 >More info 0.58 >More info WT aerial part Original data GEO bulk
119 Laer pretreat GA+JA Flg22 0h 0.68 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
120 ani1 T0.5 -0.53 >More info -0.62 >More info WT T0.5 root tissue Original data GEO bulk
121 WT-SA 0.55 >More info 0.60 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
122 gai Flg22 2h -0.72 >More info -0.43 >More info Laer Flg22 2h leaf discs Original data GEO bulk
123 S58-2 0.45 >More info 0.70 >More info wt Original data GEO bulk
124 Dex-rga(delta17) 4h GA4+DEX -0.48 >More info -0.67 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
125 35S:RPS4 eds1-2 24h -0.52 >More info -0.62 >More info 35S:RPS4 24h leaves Original data
126 lht1 PstDC3000 48h 0.46 >More info 0.68 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
127 P.p 2.5hai 0.62 >More info 0.51 >More info At-Control roots Original data GEO bulk
128 CMP 4hr 0.58 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
129 gai Control 0.62 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
130 mkk1/mkk2 control rep 0.58 >More info 0.55 >More info Col-0 Time 0 rep Original data GEO bulk
131 Lipopolysaccaride4 h (leaf) 0.62 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
132 Shoot -Cs 0.47 >More info 0.66 >More info Control-shoot Original data GEO bulk
133 Col leaves 48h LT 0.52 >More info 0.60 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
134 penta Alternaria 3dpi 0.61 >More info 0.51 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
135 GSH 0.56 >More info 0.56 >More info control GSH treated seedlings Original data GEO bulk
136 35S:RPS4 rrs1-11 8h -0.62 >More info -0.50 >More info 35S:RPS4 8h leaves Original data
137 Elevated CO2 AMPLE N NIGHT 0.40 >More info 0.72 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
138 rosette Light Wounded 0.56 >More info 0.55 >More info rosette Light Control Original data GEO bulk
139 ice1 control 0.50 >More info 0.61 >More info WT control Original data GEO bulk
140 oligomycin 4 h 0.60 >More info 0.51 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
141 ice1 3H Cold 0.61 >More info 0.50 >More info WT 3H Cold Original data GEO bulk
142 Laer pretreat GA Flg22 2h 0.70 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
143 Col ozone 2d 0.52 >More info 0.59 >More info Col clean-air 2d ozone Original data GEO bulk
144 tbf1-mock spray 0.61 >More info 0.50 >More info WT-mock spray water for 6 hrs (spray) mature leaf Original data GEO bulk
145 Leafminer damaged seedlings 0.54 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
146 ice1 24H Cold 0.61 >More info 0.49 >More info WT 24H Cold Original data GEO bulk
147 Mutant siz1-3 0.56 >More info 0.54 >More info Col-0 Original data GEO bulk
148 siz1-3 control 0.56 >More info 0.54 >More info Col-0 control Original data GEO bulk
149 npr1-PsmES4326-24hpi -0.64 >More info -0.46 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
150 Light 3day wt -0.44 >More info -0.66 >More info 0h wt Original data
151 rosette Dark Wounded 0.56 >More info 0.53 >More info rosette Dark Control Original data GEO bulk
152 sid2 -0.55 >More info -0.54 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
153 Rsch 3d 0.57 >More info 0.52 >More info Rsch CA Leaves Original data
154 Rsch 1d 0.50 >More info 0.59 >More info Rsch CA Leaves Original data
155 Cycloheximide 3 h 0.61 >More info 0.48 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
156 chito-octamer 0.56 >More info 0.52 >More info Col Mock Original data GEO bulk
157 gpa1 -ABA LF 0.55 >More info 0.53 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
158 Cor 24h 0.53 >More info 0.55 >More info Mock 24h Cor Original data GEO bulk
159 LTN008-2 aza-dc 0.60 >More info 0.48 >More info LTN012-2 Mock Original data
160 AgNO3 3 h 0.58 >More info 0.50 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
161 Col whole leaf amplified 5 dpi 0.54 >More info 0.54 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
162 lht1 untreated 0.43 >More info 0.65 >More info WT untreated untreated leaf Original data GEO bulk
163 WT light -0.56 >More info -0.51 >More info WT dark Original data GEO bulk
164 S15-118 0.44 >More info 0.63 >More info wt Original data GEO bulk
165 ice1 6H Cold 0.50 >More info 0.57 >More info WT 6H Cold Original data GEO bulk
166 seedlings-week-old RECA1-overexpressing
transgenic		 0.49 >More info 0.58 >More info seedlings-week-old Col-0 seedlings Original data
167 gpa1 -ABA GC -0.56 >More info -0.50 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
168 apk1 apk2 0.50 >More info 0.56 >More info Col0-control whole rosette Original data GEO bulk
169 Col 1d 0.52 >More info 0.54 >More info Col CA Leaves Original data
170 aerial organ callus inducing medium 96 h 0.52 >More info 0.54 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
171 CLO 4mM 0.54 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
172 WT Bc inoculation 14h 0.64 >More info 0.41 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
173 eds16 whole leaf 5dpi -0.53 >More info -0.52 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
174 IAA19mII over-expressor IAA Treated 0.55 >More info 0.50 >More info empty vector IAA Treated Original data GEO bulk
175 cs26 long day 0.55 >More info 0.50 >More info Leaves-WT-LD leaf Original data GEO bulk
176 ASL9-ox -0.53 >More info -0.52 >More info WT aerial parts of seedlings Original data GEO bulk
177 WT +Pep2 2h 0.70 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
178 coi1-2 0.62 >More info 0.42 >More info Col-0 mock Whole seedling Original data GEO bulk
179 pmr5 pmr6 0.55 >More info 0.49 >More info Col-0 Original data GEO bulk
180 pad2-PsmES4326-24hpi -0.54 >More info -0.50 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
181 agb1 gpa1 -ABA GC -0.55 >More info -0.49 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
182 WT in -N 0.53 >More info 0.51 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
183 WT AntimycinA 3h 0.54 >More info 0.50 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
184 mkk1/mkk2 24h BTH rep 0.49 >More info 0.55 >More info Col-0 24h BTH rep Original data GEO bulk
185 DC3000 24h 0.42 >More info 0.62 >More info Mock 24h DC3000 Original data GEO bulk
186 albino Ds13-2198-1 -0.49 >More info -0.55 >More info control Original data GEO bulk
187 phr1 Shoot-Pi -0.53 >More info -0.50 >More info WT Root-Pi shoots Original data GEO bulk
188 P.p 10.5hai 0.52 >More info 0.51 >More info At-Control roots Original data GEO bulk
189 pnp1-1 3h +P 0.56 >More info 0.47 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
190 Mutant siz1-3 (Drought) 0.55 >More info 0.48 >More info Col-0 (Drought) Original data GEO bulk
191 Col-0 flu HL 3h 0.53 >More info 0.50 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
192 siz1-3 drought 0.55 >More info 0.48 >More info Col-0 drought Original data GEO bulk
193 Wounding Stress3 h (shoot) 0.51 >More info 0.52 >More info Stress mock 3 h (shoot) Original data Stress treatments
194 WT Seedling BL -0.51 >More info -0.51 >More info WT Seedling Dark Original data GEO bulk
195 Ambient CO2 fully expanded leaf -0.60 >More info -0.42 >More info Control for tissue data fully expanded leaf Original data
196 eif3h polysome 0.57 >More info 0.44 >More info WT polysome Original data GEO bulk
197 Sulfometuron EC50 0.58 >More info 0.43 >More info Carrier Original data GEO bulk
198 P.p 6hai 0.49 >More info 0.52 >More info At-Control roots Original data GEO bulk
199 smg7b-1 0.46 >More info 0.55 >More info WT whole plant Original data GEO bulk
200 Col BTH 0.34 >More info 0.67 >More info Col rosettes Original data GEO bulk
201 Col-0 SA 0.60 >More info 0.40 >More info Col-0 water complete seedling Original data
202 Mature callus 0.51 >More info 0.49 >More info Young callus hypocotyls Original data GEO bulk
203 pnp1-1 1wk +P 0.55 >More info 0.45 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
204 Te 1d 0.54 >More info 0.46 >More info Te CA Leaves Original data
205 IAA19mII over-expressor mock 0.52 >More info 0.48 >More info empty vector mock Original data GEO bulk
206 Col-0 drought 0.56 >More info 0.44 >More info Col-0 control Original data GEO bulk
207 bio4-1 mutant leaves 0.34 >More info 0.66 >More info WT leaves leaves Original data GEO bulk
208 gpa1-4/agb1-2 ozone 3h -0.48 >More info -0.52 >More info Col ozone 3h ozone Original data GEO bulk
209 bak1-3 +Pep2 10h 0.48 >More info 0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
210 Pst-DC3000(avrRpm1)-4hpi 0.40 >More info 0.60 >More info Pst-DC3000-4hpi Original data GEO bulk
211 Dex-rga(delta17) 2h GA4+DEX -0.38 >More info -0.62 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
212 IRP1-OE-Fe--shoot 0.39 >More info 0.61 >More info COL-0-Fe--shoot shoot Original data
213 bZIP1ko mutant N+Light+ 0.64 >More info 0.35 >More info WT-sib N+Light+ whole plant Original data GEO bulk
214 eds16 whole leaf 7d UI -0.53 >More info -0.46 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
215 Expanding leaf -0.55 >More info -0.44 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
216 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight 0.56 >More info 0.43 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
217 Col-0 V. longisporum-inoculated 48 hpi 0.47 >More info 0.52 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
218 Mutant arf2-6 -0.61 >More info -0.37 >More info Col Original data GEO bulk
219 camta1/2/3 warm 0.53 >More info 0.45 >More info WT warm entire aerial part Original data GEO bulk
220 Ambient CO2 expanding leaf -0.57 >More info -0.41 >More info Control for tissue data expanding leaf Original data
221 WT mitomycin C 0.61 >More info 0.36 >More info WT mock shoot apical meristem Original data
222 gpa1-4/agb1-2 ozone 2d -0.60 >More info -0.37 >More info Col ozone 2d ozone Original data GEO bulk
223 entire vegetative rosette -0.64 >More info -0.33 >More info Col-0 Mock WL entire vegetative rosette Original data
224 csn5 (csn5a-2 csn5b) light 0.53 >More info 0.44 >More info WT light Original data GEO bulk
225 Van 0.68 >More info 0.28 >More info Col-0 Original data GEO bulk
226 pmr4-1 control 0.40 >More info 0.56 >More info WT control uninoculated Original data GEO bulk
227 Leaf -0.55 >More info -0.41 >More info Control for tissue data leaf Original data GEO bulk
228 UV 0.55 >More info 0.41 >More info WT aerial region Original data GEO bulk
229 aerial organ callus inducing medium 48 h 0.53 >More info 0.43 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
230 gh3.5-1D 48 hpi 0.42 >More info 0.54 >More info Col-0 uninoculated Original data GEO bulk
231 gai Flg22 1h -0.52 >More info -0.43 >More info Laer Flg22 1h leaf discs Original data GEO bulk
232 WT+chitooctaose 0.50 >More info 0.45 >More info WT+water chitooctaose seedlings Original data GEO bulk
233 P.syringae AvrRpt2 4 h (leaf) 0.38 >More info 0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
234 tmm1-inflorescence-tips 0.35 >More info 0.60 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
235 Leafminer locally damaged thaliana seedlings 0.54 >More info 0.40 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
236 nia1nia2 0.54 >More info 0.40 >More info Col-0 whole seedlings Original data GEO bulk
237 ML (Mature leaves) 35DAS -0.53 >More info -0.41 >More info Control for tissue data Original data GEO bulk
238 IRP1-OE-Ctrl--shoot 0.41 >More info 0.53 >More info COL-0-Ctrl--shoot shoot Original data
239 Proximalhalf (leaf7) -0.54 >More info -0.39 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
240 WT cotyledons -0.53 >More info -0.40 >More info Control for tissue data cotyledons Original data
241 shoots bhlh100/101 0uM Fe 0.51 >More info 0.42 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
242 Col upon hypoxia 6 hrs 0.58 >More info 0.35 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
243 Rosette leaf No12 -0.52 >More info -0.41 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
244 smg5-2 0.50 >More info 0.43 >More info WT whole plant Original data GEO bulk
245 Petiol (leaf7) -0.53 >More info -0.39 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
246 pnp1-1 1wk -P 0.54 >More info 0.38 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
247 Differentiation 48h 0.50 >More info 0.42 >More info Differentiation 0h leaves Original data
248 9m.KNO3 0.33 >More info 0.59 >More info To. KNO3 14 day old Roots Original data GEO bulk
249 Distal half (leaf7) -0.54 >More info -0.37 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
250 Differentiation 36h 0.51 >More info 0.40 >More info Differentiation 0h leaves Original data
251 Full AC2 T2 0.67 >More info 0.24 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
252 Col-0 under 4 days salt 0.50 >More info 0.41 >More info Col-0 under control 4 days salt treatment rosette Original data
253 dor drought 0.50 >More info 0.41 >More info WT drought Original data GEO bulk
254 SA 4mM 0.60 >More info 0.31 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
255 leaf -0.50 >More info -0.40 >More info Control for tissue data leaf Original data GEO bulk
256 P35S:rGRF3 0.53 >More info 0.37 >More info WS Original data GEO bulk
257 nia1nia2noa1-2 0.50 >More info 0.40 >More info Col-0 whole seedlings Original data GEO bulk
258 Rsch 8h 0.35 >More info 0.55 >More info Rsch CA Leaves Original data
259 Nicotinamide-85hr 0.55 >More info 0.34 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
260 Nicotinamide-53hr 0.53 >More info 0.36 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
261 Rosette leaf No2 -0.53 >More info -0.36 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
262 ARR22-ox (t-zeatin 3 h) 0.51 >More info 0.38 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
263 Nicotinamide-81hr 0.60 >More info 0.29 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
264 WT resupplied Pi 4h 0.54 >More info 0.34 >More info WT complete seedlings Original data
265 Cotyledons -0.51 >More info -0.37 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
266 GO5; harvested 8h continiously maintained in high
CO2;		 -0.50 >More info -0.38 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
267 gh3.5D uninoculated -0.53 >More info -0.35 >More info Col-0 48 hpi Original data GEO bulk
268 WT+H2O2 0.35 >More info 0.53 >More info WT H2O2 Original data GEO bulk
269 treated group 0.52 >More info 0.35 >More info Control group Original data
270 sid2-PsmES4326-24hpi -0.52 >More info -0.35 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
271 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hMockDark 0.51 >More info 0.35 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hMockDark 2 h mock dark seedling Original data
272 Cauline leaves -0.51 >More info -0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
273 Whole root - low pH 48H 0.36 >More info 0.50 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
274 aba3-1 0.32 >More info 0.53 >More info wt Original data GEO bulk
275 Nicotinamide-77hr 0.52 >More info 0.32 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
276 Van SA 0.57 >More info 0.27 >More info Col-0 SA Original data GEO bulk
277 Cocultivation 8 hrs leaf -0.50 >More info -0.33 >More info Mock cocultivation 8 hrs leaf Leaf Original data
278 WT Shoot-Pi 0.51 >More info 0.32 >More info WT Shoot+Pi shoots Original data GEO bulk
279 AtMYB30-as 90-105 min Xanthomonas 0.54 >More info 0.28 >More info WT 90-105 min Xanthomonas Original data GEO bulk
280 Nicotinamide-57hr 0.51 >More info 0.31 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
281 HairpinZ 4 h (leaf) 0.85 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
282 Truncated AC2 T2 -0.70 >More info -0.11 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
283 Mutant arf2 (etiol) 0.30 >More info 0.50 >More info Col (etiol) Original data GEO bulk
284 arf2 mock 0.30 >More info 0.50 >More info Col mock Original data GEO bulk
285 elf3-7-16ºC 0.29 >More info 0.51 >More info WT-16ºC Original data GEO bulk
286 NAA 3h 0.51 >More info 0.28 >More info before treatment NAA root Original data GEO bulk
287 Nicotinamide-89hr 0.55 >More info 0.24 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
288 E.orontii Infection 3 day 0.27 >More info 0.52 >More info Uninfection 3 day Original data Elicitor treatments
289 FarRed Light 45min -0.03 >More info -0.75 >More info White Light 45min Original data Light treatments
290 Mt SA 0.53 >More info 0.24 >More info Col-0 SA Original data GEO bulk
291 Bur-0-1h IAA 0.51 >More info 0.26 >More info Bur-0h IAA whole plant Original data GEO bulk
292 cpr5npr1svi1 0.25 >More info 0.52 >More info WT(COL) Original data GEO bulk
293 35S::PI ap3-3 35S::AP-GR +DEX 0.27 >More info 0.50 >More info 0hr DEX Original data GEO bulk
294 rao1-2 3h antimycin A -0.50 >More info -0.26 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
295 sex4-3 -0.57 >More info -0.19 >More info Col-WT leaves Original data GEO bulk
296 MYB46-GR DEX 0.16 >More info 0.59 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
297 AtMYB30-ox 2-4h Xanthomonas 0.66 >More info 0.08 >More info WT 2-4h Xanthomonas Original data GEO bulk
298 penta Flg22 2h 0.58 >More info 0.16 >More info Laer Flg22 2h leaf discs Original data GEO bulk
299 light -0.56 >More info -0.18 >More info dark light seedling Original data GEO bulk
300 Col laser microdissected 5 dpi 0.21 >More info 0.53 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
301 root cap pGL2(QC pSCRBRI1) 3h BL 0.54 >More info 0.19 >More info root cap pGL2(QC pSCRBRI1) 0h BL brassinosteroid root Original data
302 2hr continuous KNO3 ECR cell 0.23 >More info 0.50 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
303 35S:RPS4 eds1-2 T0 0.16 >More info 0.56 >More info 35S:RPS4 T0 leaves Original data
304 root cap pGL2 0h BL 0.54 >More info 0.18 >More info WR 35S 0h BL brassinosteroid root Original data
305 Mutant gh3.5-1D (AvrRpt2) 0.20 >More info 0.52 >More info Col-0 (AvrRpt2) Original data GEO bulk
306 Heat shock optimum 0.07 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
307 Whole root - S 3H 0.21 >More info 0.51 >More info Whole root - S 0H Original data GEO bulk
308 bbx24 in With Light 0.54 >More info 0.17 >More info WT in With Light light seedling Original data
309 WT NAA 1h 0.69 >More info 0.02 >More info WT 0h Leaf tissue Original data GEO bulk
310 bak1-3 +Pep2 2h -0.51 >More info -0.19 >More info WT +Pep2 2h Pep2 Original data GEO bulk
311 penta Flg22 1h 0.63 >More info 0.07 >More info Laer Flg22 1h leaf discs Original data GEO bulk
312 atgsnor1-1-avrB-6h 0.18 >More info 0.52 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
313 sfr3 cold 0.64 >More info 0.05 >More info WT-cold aerial tissues Original data GEO bulk
314 SA Treated 0.61 >More info 0.08 >More info Water Original data GEO bulk
315 Laer GA 1h 0.51 >More info 0.18 >More info Laer Control leaf discs Original data GEO bulk
316 mkk2 24h BTH rep 0.19 >More info 0.50 >More info Col-0 24h BTH rep Original data GEO bulk
317 Al treated 0.15 >More info 0.53 >More info control Original data GEO bulk
318 SHR-GR Time 3H Dex 0.18 >More info 0.50 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
319 CeO2 germinant -0.09 >More info -0.58 >More info Millipore Water germinant CeO2 seedling Original data
320 oxt6:AtCPSF30 line -0.54 >More info -0.12 >More info oxt6 mutant Original data GEO bulk
321 agb1 gpa1 +ABA GC -0.54 >More info -0.12 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
322 amiRAP hypoxic -0.07 >More info -0.59 >More info hypoxic hypoxia Original data GEO bulk
323 Red/FR Light45min -0.22 >More info 0.87 >More info FarRed Light 45min Original data Light treatments
324 pvip1 pvip2 seedling 0.65 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
325 OE WRKY40.4 high light 0.04 >More info 0.58 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
326 HSP90 Reduced RNAi-A3 0.51 >More info 0.10 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
327 NJ15 -0.01 >More info 0.60 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
328 GA 0.06 >More info 0.50 >More info none GA Rosette Original data GEO bulk
329 0.5h pollen tube 0.02 >More info 0.53 >More info drypollen in vitro-grown pollen tubes Original data GEO bulk
330 P. infestans 6 h (leaf) 0.67 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
331 wrky33 mock 0.51 >More info -0.01 >More info WT mock 14 hour mock control leaves Original data
332 Col 8h 0.53 >More info -0.04 >More info Col CA Leaves Original data
333 siliques AtHb1 control -0.03 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
334 2hr transitory KNO3 ECR cell -0.09 >More info 0.58 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
335 pXVE:HA-EDM2-a untreated 0.04 >More info -0.52 >More info Col-0 untreated seedlings Original data GEO bulk
336 0h hml 0.50 >More info -0.02 >More info 0h wt Original data
337 GST-overexpression seedlings control 0.58 >More info -0.10 >More info WT seedlings control Seedlings Original data
338 bri1-116 -0.26 >More info 0.73 >More info Col seedling Original data GEO bulk
339 CCA1-ox 6am non-polysomal -0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
340 Col PSTDC3000 24h 0.59 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
341 seed germinating in countinuous light 24h SL -0.32 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
342 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info 0.24 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
343 ptpks2 -0.57 >More info 0.28 >More info Col-WT leaves Original data GEO bulk
344 AFB1 0h 0.25 >More info -0.51 >More info Col 0h Leaf Original data GEO bulk
345 Shoot apex inflorescence (after bolting) -0.40 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages