4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 Flg22 4h
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List of experiments correlated with "Col-0 Flg22 4h"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 Flg22 4h		 Correlation to
Col-0 Flg22 4h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 Flg22 4h 1.00 >More info 1.00 >More info Col-0 H2O 4h Original data GEO bulk
2 mpk6-ko Flg22 4h 0.85 >More info 0.85 >More info mpk6-ko H2O 4h Original data GEO bulk
3 Flagellin 4 h (leaf) 0.84 >More info 0.82 >More info Mock 4 h (leaf) Original data Elicitor treatments
4 35S::ERF104 Flg22 4h 0.82 >More info 0.79 >More info 35S::ERF104 H2O 4h Original data GEO bulk
5 hrcC 0.85 >More info 0.75 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
6 hrpA 7h 0.84 >More info 0.76 >More info Mock 7h hrpA Original data GEO bulk
7 GST 4 h (leaf) 0.75 >More info 0.85 >More info Mock 4 h (leaf) Original data Elicitor treatments
8 E.coli TUV86 2 fliC 7h 0.82 >More info 0.76 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
9 erf104-ko Flg22 4h 0.78 >More info 0.80 >More info erf104-ko H2O 4h Original data GEO bulk
10 col-5 hrpA 2h 0.79 >More info 0.78 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
11 GST NPP1 4 h (leaf) 0.83 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
12 WT 2-4h Xanthomonas 0.80 >More info 0.75 >More info WT T0 Original data GEO bulk
13 Lipopolysaccaride4 h (leaf) 0.74 >More info 0.81 >More info Mock 4 h (leaf) Original data Elicitor treatments
14 WT +elf18 2h 0.80 >More info 0.73 >More info WT untreated elf18 Original data GEO bulk
15 hrpA fliC 7h 0.81 >More info 0.72 >More info Mock 7h hrpA fliC Original data GEO bulk
16 E.coli 0157 H7 7h 0.82 >More info 0.71 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
17 DC3000 2 h (leaf) 0.73 >More info 0.77 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
18 35S::ERF104 H2O 4h 0.74 >More info 0.76 >More info Col-0 H2O 4h Original data GEO bulk
19 col-5 hrpA 12h 0.78 >More info 0.72 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
20 Phaseolicola 2 h (leaf) 0.74 >More info 0.75 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
21 erf104-ko H2O 4h 0.74 >More info 0.75 >More info Col-0 H2O 4h Original data GEO bulk
22 col-5 hrpA 4h 0.79 >More info 0.69 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
23 mpk6-ko H2O 4h 0.66 >More info 0.81 >More info Col-0 H2O 4h Original data GEO bulk
24 efr-1 +elf18 10h -0.80 >More info -0.67 >More info WT +elf18 10h elf18 Original data GEO bulk
25 col-5 DC3000 4h 0.76 >More info 0.69 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
26 WT +elf18 10h 0.81 >More info 0.62 >More info WT untreated elf18 Original data GEO bulk
27 tunicamycin -0.70 >More info -0.70 >More info DMF Original data GEO bulk
28 WT flg22 2h 0.73 >More info 0.67 >More info WT 0h Leaf tissue Original data GEO bulk
29 +1.6 mM Tween 20 1 h. 0.65 >More info 0.74 >More info +distilled water 1 h. Original data GEO bulk
30 WT 90-105 min Xanthomonas 0.71 >More info 0.68 >More info WT T0 Original data GEO bulk
31 DC3000 hrcC 2 h (leaf) 0.66 >More info 0.72 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
32 miR393 flg22 2h 0.74 >More info 0.62 >More info WT 0h Leaf tissue Original data GEO bulk
33 HopZ1a treated 0.73 >More info 0.62 >More info col Original data GEO bulk
34 Laer pretreat GA Flg22 1h 0.63 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
35 HopZ1a treated ulp1c ulp1d 0.73 >More info 0.61 >More info col Original data GEO bulk
36 pepr1-1 Pepr2-3 +Pep2 2h -0.73 >More info -0.61 >More info WT +Pep2 2h Pep2 Original data GEO bulk
37 Laer Alternaria 3dpi -0.73 >More info -0.60 >More info Laer Control leaf discs Original data GEO bulk
38 AvrRpt2 Col-0 6hpi 0.77 >More info 0.56 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
39 pvip1 pvip2 0.77 >More info 0.55 >More info Col-0 whole rosettes Original data GEO bulk
40 seedlings protease IV 0.73 >More info 0.59 >More info seedlings nontreated control whole seedling Original data
41 Cor 24h 0.71 >More info 0.61 >More info Mock 24h Cor Original data GEO bulk
42 AvrRpm1 2 h (leaf) 0.61 >More info 0.70 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
43 Cor hrpS 10h 0.77 >More info 0.54 >More info Mock 10h Cor hrpS Original data GEO bulk
44 AFB1 flg22 2h 0.72 >More info 0.57 >More info WT 0h Leaf tissue Original data GEO bulk
45 IRP1-OE-Fe--shoot 0.75 >More info 0.54 >More info COL-0-Fe--shoot shoot Original data
46 Col-0-avrB-6h 0.62 >More info 0.67 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
47 Seedling KUA1-IOX est 0.75 >More info 0.53 >More info Seedling KUA1-IOX mock Original data
48 col-5 DC3000-avrRpm 4h 0.74 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
49 WT-SA 0.63 >More info 0.64 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
50 P.syringae AvrRpt2 4 h (leaf) 0.54 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
51 Leafminer damaged seedlings 0.70 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
52 WT NAA/flg 2h 0.73 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
53 Pto inoculated 0.71 >More info 0.53 >More info col Original data GEO bulk
54 gpa1 -ABA GC -0.62 >More info -0.61 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
55 ataf1-1 mutant Col-0 Bgh inoculated 0.67 >More info 0.55 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
56 smg7b-1 0.64 >More info 0.58 >More info WT whole plant Original data GEO bulk
57 WT-NOCO2 INFECTED 0.65 >More info 0.57 >More info WT-MOCK Original data GEO bulk
58 coi1-2 0.62 >More info 0.59 >More info Col-0 mock Whole seedling Original data GEO bulk
59 AZC 0.66 >More info 0.55 >More info noneHS Original data GEO bulk
60 Col-0 9 hpi A. brassicicola 0.70 >More info 0.51 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
61 ulp1c ulp1d +Pto 0.74 >More info 0.47 >More info ulp1c ulp1d mock Original data GEO bulk
62 ice1 6H Cold 0.56 >More info 0.64 >More info WT 6H Cold Original data GEO bulk
63 Col0-PsmES4326-24hpi 0.59 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
64 Laer Flg22 2h 0.75 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
65 msh1 albino 0.68 >More info 0.50 >More info WT aerial part Original data GEO bulk
66 AgNO3 3 h 0.61 >More info 0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
67 Dex-rga(delta17) 4h GA4 -0.66 >More info -0.51 >More info Vector 4h GA4 shoots Original data GEO bulk
68 Leafminer locally damaged thaliana seedlings 0.70 >More info 0.47 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
69 Wounding Stress3 h (shoot) 0.62 >More info 0.55 >More info Stress mock 3 h (shoot) Original data Stress treatments
70 col-5 DC3000 12h 0.73 >More info 0.44 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
71 WT Col-0 Bgh inoculated 0.65 >More info 0.52 >More info WT Col-0 Un-inoculated Original data GEO bulk
72 ein2-1 9 hpi A. brassicicola 0.68 >More info 0.48 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
73 SLWF infested 0.58 >More info 0.58 >More info SLWF uninfested rosette tissue Original data GEO bulk
74 del1-1 mutant 5d uninfected 0.60 >More info 0.55 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
75 Col whole leaf 7dpi 0.61 >More info 0.54 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
76 WT flg22 1h 0.71 >More info 0.44 >More info WT 0h Leaf tissue Original data GEO bulk
77 Te ozone 0.68 >More info 0.47 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
78 lht1 untreated 0.61 >More info 0.54 >More info WT untreated untreated leaf Original data GEO bulk
79 Col ozone 3h 0.57 >More info 0.58 >More info Col clean-air 3h ozone Original data GEO bulk
80 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.75 >More info -0.40 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
81 IAA7mII over-expressor IAA Treated 0.46 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
82 flu 0.61 >More info 0.53 >More info WT Col Original data GEO bulk
83 seedlings-week-old RECA1-overexpressing
transgenic		 0.62 >More info 0.52 >More info seedlings-week-old Col-0 seedlings Original data
84 OE WRKY63.3 high light 0.54 >More info 0.60 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
85 LTN008-2 aza-dc 0.72 >More info 0.42 >More info LTN012-2 Mock Original data
86 coi1-16 ein2 sid2 ctrl -0.69 >More info -0.45 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
87 bio4-1 mutant leaves 0.52 >More info 0.61 >More info WT leaves leaves Original data GEO bulk
88 TNT-seedlings 0.51 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
89 35S:RPS4 eds1-2 8h -0.64 >More info -0.49 >More info 35S:RPS4 8h leaves Original data
90 chito-tetramer 0.62 >More info 0.50 >More info Col Mock Original data GEO bulk
91 miR393 flg22 1h 0.66 >More info 0.46 >More info WT 0h Leaf tissue Original data GEO bulk
92 Laer Flg22+GA 2h 0.72 >More info 0.40 >More info Laer Control leaf discs Original data GEO bulk
93 anac017-2 AntimycinA 3h -0.66 >More info -0.46 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
94 pnp1-1 1wk +P 0.63 >More info 0.49 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
95 WT 3h -P 0.38 >More info 0.74 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
96 CT101 ozone 0.69 >More info 0.42 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
97 ice1 24H Cold 0.62 >More info 0.49 >More info WT 24H Cold Original data GEO bulk
98 WT NAA/flg 1h 0.69 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
99 coi1-16 ein2 sid2 ozone 0.72 >More info 0.39 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
100 AFB1 flg22 1h 0.69 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
101 flu over-tAPX 0.59 >More info 0.52 >More info WT Col Original data GEO bulk
102 ice1 control 0.54 >More info 0.56 >More info WT control Original data GEO bulk
103 WT +Pep2 2h 0.75 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
104 B.cinerea 18 h infection 0.58 >More info 0.52 >More info Mock 18 h Original data Botrytis cinerea infection
105 Botrytis cinerea 18h 0.58 >More info 0.52 >More info control 18h Original data GEO bulk
106 Col BTH 0.43 >More info 0.67 >More info Col rosettes Original data GEO bulk
107 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.69 >More info 0.41 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
108 rosette leaves fdh 0.62 >More info 0.47 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
109 pepr1-1 Pepr2-3 +Pep2 10h -0.57 >More info -0.52 >More info WT +Pep2 10h Pep2 Original data GEO bulk
110 Mutant siz1-3 0.59 >More info 0.50 >More info Col-0 Original data GEO bulk
111 Col-0 ozone 0.69 >More info 0.40 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
112 siz1-3 control 0.59 >More info 0.50 >More info Col-0 control Original data GEO bulk
113 CMV-WT 0.56 >More info 0.52 >More info Mock-At Aerial tissues Original data GEO bulk
114 dde2-2 9 hpi A. brassicicola 0.70 >More info 0.38 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
115 gh3.5-1D 48 hpi 0.63 >More info 0.45 >More info Col-0 uninoculated Original data GEO bulk
116 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.68 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
117 Col whole leaf 5dpi 0.53 >More info 0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
118 G3P 0.43 >More info 0.64 >More info Mock distal leaves Original data GEO bulk
119 chito-octamer 0.60 >More info 0.47 >More info Col Mock Original data GEO bulk
120 gpa1-4/agb1-2 ozone 2d -0.59 >More info -0.48 >More info Col ozone 2d ozone Original data GEO bulk
121 Nicotinamide-69hr 0.67 >More info 0.39 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
122 DFPM 0.57 >More info 0.49 >More info control Original data GEO bulk
123 Col leaves 48h LT 0.63 >More info 0.42 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
124 bio4-1 mutant watered00µM biotin leaves -0.53 >More info -0.52 >More info bio4-1 mutant leaves leaves Original data GEO bulk
125 Laer Flg22+GA 1h 0.68 >More info 0.37 >More info Laer Control leaf discs Original data GEO bulk
126 CAX1/CAX3 mutant 0.55 >More info 0.50 >More info Col whole plant Original data GEO bulk
127 Laer MeJA 1h -0.64 >More info -0.41 >More info Laer Control leaf discs Original data GEO bulk
128 eds16 whole leaf 7d UI -0.39 >More info -0.66 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
129 Laer Flg22 1h 0.70 >More info 0.35 >More info Laer Control leaf discs Original data GEO bulk
130 upf1 0.58 >More info 0.47 >More info WT whole plant Original data GEO bulk
131 agb1 gpa1 +ABA LF -0.58 >More info -0.47 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
132 IRP1-OE-Ctrl--shoot 0.69 >More info 0.36 >More info COL-0-Ctrl--shoot shoot Original data
133 WT powdery mildew 0.47 >More info 0.58 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
134 Col upon hypoxia 6 hrs 0.70 >More info 0.34 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
135 gun1gun5 far-red pretreated -0.54 >More info -0.50 >More info WT far-red pretreated Original data GEO bulk
136 lht1 PstDC3000 48h 0.55 >More info 0.49 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
137 CeO2 germinant -0.50 >More info -0.54 >More info Millipore Water germinant CeO2 seedling Original data
138 ceh1 mutant 0.48 >More info 0.56 >More info Parent line Original data
139 anac017-1 H2O2 3h -0.59 >More info -0.44 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
140 Time-0 chr11-1chr17-1 -0.57 >More info -0.46 >More info Time-0 Col-0 leaf explants Original data
141 Mutant gh3.5-1D (AvrRpt2) 0.63 >More info 0.40 >More info Col-0 (AvrRpt2) Original data GEO bulk
142 SA 4mM 0.54 >More info 0.49 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
143 Infected pft1 leaf 0.42 >More info 0.61 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
144 AFB1 0h 0.63 >More info 0.39 >More info Col 0h Leaf Original data GEO bulk
145 cpr5npr1svi1 0.54 >More info 0.48 >More info WT(COL) Original data GEO bulk
146 WT chitooctaose 0.59 >More info 0.43 >More info WT water Original data GEO bulk
147 WT+chitooctaose 0.58 >More info 0.44 >More info WT+water chitooctaose seedlings Original data GEO bulk
148 DC3000 24h 0.55 >More info 0.47 >More info Mock 24h DC3000 Original data GEO bulk
149 Nicotinamide-85hr 0.56 >More info 0.45 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
150 rosette Dark Wounded 0.51 >More info 0.50 >More info rosette Dark Control Original data GEO bulk
151 ice1 3H Cold 0.56 >More info 0.45 >More info WT 3H Cold Original data GEO bulk
152 CMP 4hr 0.56 >More info 0.45 >More info Acetone 4hr root Original data GEO bulk
153 Laer Pst DC3000 12hpi -0.65 >More info -0.36 >More info Laer Control leaf discs Original data GEO bulk
154 upf3 0.52 >More info 0.49 >More info WT whole plant Original data GEO bulk
155 Nicotinamide-65hr 0.66 >More info 0.35 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
156 bak1-3 +Pep2 10h 0.56 >More info 0.44 >More info WT +Pep2 10h Pep2 Original data GEO bulk
157 C24 ozone 0.65 >More info 0.35 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
158 plant (tga2-5-6) 4h phytoprostane A1 0.58 >More info 0.42 >More info plant (tga2-5-6) 4h control Original data GEO bulk
159 anac017-2 H2O2 3h -0.60 >More info -0.40 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
160 Nicotinamide-57hr 0.57 >More info 0.43 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
161 ARR22-ox (t-zeatin 3 h) 0.63 >More info 0.37 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
162 npr1-1 SA -0.68 >More info -0.31 >More info Col-0 SA complete seedling Original data
163 spx1 spx2 complete 0.60 >More info 0.39 >More info WT complete seedlings Original data
164 cat2-2; 8h switch to ambient CO2 concentrations; 0.66 >More info 0.33 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
165 vtc1 (II) 0.51 >More info 0.48 >More info Col (II) rosette Original data GEO bulk
166 PAHs stress 0.60 >More info 0.39 >More info exp control phenanthrene whole plants Original data GEO bulk
167 Nicotinamide-73hr 0.56 >More info 0.43 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
168 downy mildew cotyledons late stage 0.47 >More info 0.52 >More info mock inoculated Cotyledons Original data GEO bulk
169 Mutant siz1-3 (Drought) 0.53 >More info 0.45 >More info Col-0 (Drought) Original data GEO bulk
170 cpr5 0.51 >More info 0.47 >More info WT(COL) Original data GEO bulk
171 siz1-3 drought 0.53 >More info 0.45 >More info Col-0 drought Original data GEO bulk
172 wrky33 Bc inoculation 14h 0.66 >More info 0.31 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
173 P.p 2.5hai 0.59 >More info 0.38 >More info At-Control roots Original data GEO bulk
174 WT Red light 1h 0.68 >More info 0.29 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
175 safener treated 0.58 >More info 0.39 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
176 C58 3hpi 0.59 >More info 0.38 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
177 Col-0 INA 48h 0.39 >More info 0.58 >More info Col-0 MOCK 48h Original data GEO bulk
178 sid2 -0.51 >More info -0.45 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
179 wavy 0.50 >More info 0.46 >More info WT Original data GEO bulk
180 S58-2 0.54 >More info 0.42 >More info wt Original data GEO bulk
181 WT resupplied Pi 4h 0.58 >More info 0.38 >More info WT complete seedlings Original data
182 coi1-2 JA 0.62 >More info 0.34 >More info JA Whole seedling Original data GEO bulk
183 shoots bhlh100/101 100uM Fe 0.41 >More info 0.55 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
184 Nicotinamide-93hr 0.64 >More info 0.31 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
185 Col-0 V. longisporum-inoculated 48 hpi 0.59 >More info 0.36 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
186 SCR-GR Time 1H Dex 0.52 >More info 0.43 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
187 Rsch 1d 0.61 >More info 0.34 >More info Rsch CA Leaves Original data
188 Laer treat paclobutrazol (PAC) 0.66 >More info 0.29 >More info Laer Control leaf discs Original data GEO bulk
189 Dex-rga(delta17) 2h GA4 -0.58 >More info -0.37 >More info Vector 4h GA4 shoots Original data GEO bulk
190 Elevated CO2 AMPLE N NIGHT 0.40 >More info 0.54 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
191 TiO2 germinant -0.60 >More info -0.34 >More info Millipore Water germinant TiO2 seedling Original data
192 Mature callus 0.59 >More info 0.35 >More info Young callus hypocotyls Original data GEO bulk
193 Rsch 3d 0.53 >More info 0.41 >More info Rsch CA Leaves Original data
194 S15-118 0.52 >More info 0.42 >More info wt Original data GEO bulk
195 Chitosan 3h Treatment 0.42 >More info 0.52 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
196 Elevated CO2 fully expanded leaf 0.42 >More info 0.52 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
197 Nicotinamide-61hr 0.56 >More info 0.37 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
198 Cor 10h 0.55 >More info 0.38 >More info Mock 10h Cor Original data GEO bulk
199 WT AntimycinA 3h 0.55 >More info 0.38 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
200 cpr5scv1 0.58 >More info 0.35 >More info WT(COL) Original data GEO bulk
201 Nicotinamide-89hr 0.62 >More info 0.31 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
202 IMI 4mM 0.60 >More info 0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
203 protoplasts T2 [flg22] 0.54 >More info 0.38 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
204 WT seedlings NaCl -0.54 >More info -0.38 >More info WT seedlings control Seedlings Original data GEO bulk
205 35S:RPS4 eds1-2 24h -0.55 >More info -0.37 >More info 35S:RPS4 24h leaves Original data
206 eds16 whole leaf 5dpi -0.40 >More info -0.52 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
207 CLO 4mM 0.58 >More info 0.34 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
208 camta1/2/3 warm 0.57 >More info 0.35 >More info WT warm entire aerial part Original data GEO bulk
209 CMP 24hr 0.58 >More info 0.34 >More info Acetone 24hr root Original data GEO bulk
210 mkk1/mkk2 control rep 0.57 >More info 0.35 >More info Col-0 Time 0 rep Original data GEO bulk
211 sid2-2 9 hpi A. brassicicola 0.58 >More info 0.34 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
212 miR393 0h -0.51 >More info -0.40 >More info WT 0h Leaf tissue Original data GEO bulk
213 Col light-dark EtOH -0.40 >More info -0.51 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
214 Dex-rga(delta17) 4h GA4+DEX -0.59 >More info -0.32 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
215 Col-0 DCA 48h 0.34 >More info 0.57 >More info Col-0 MOCK 48h Original data GEO bulk
216 WT Bc inoculation 14h 0.62 >More info 0.28 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
217 rosette Light Wounded 0.51 >More info 0.39 >More info rosette Light Control Original data GEO bulk
218 toc1-1-69hr 0.53 >More info 0.37 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
219 Cycloheximide 3 h 0.51 >More info 0.39 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
220 Sulfometuron EC50 0.52 >More info 0.38 >More info Carrier Original data GEO bulk
221 pnp1-1 1wk -P 0.59 >More info 0.31 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
222 camta1/2/3 24h cold 0.61 >More info 0.29 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
223 WT Atum 1h 0.39 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
224 oas-a1.1 Cd 24h 0.38 >More info 0.51 >More info Cd 24h root Shoot Original data GEO bulk
225 Nicotinamide-81hr 0.57 >More info 0.32 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
226 penta Control 0.55 >More info 0.33 >More info Laer Control leaf discs Original data GEO bulk
227 gpa1-4/agb1-2 clean-air 3h -0.56 >More info -0.32 >More info Col clean-air 3h clean-air Original data GEO bulk
228 AtLysM RLK1 mutant chitooctaose -0.52 >More info -0.36 >More info WT chitooctaose Original data GEO bulk
229 arf2 brz -0.36 >More info -0.52 >More info arf2 mock Original data GEO bulk
230 miR 0h 0.37 >More info 0.51 >More info Col 0h Leaf Original data GEO bulk
231 glk1 glk2 GLK1-GR +DEX 24h -0.69 >More info -0.19 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
232 Shoot -Cs 0.29 >More info 0.59 >More info Control-shoot Original data GEO bulk
233 Nicotinamide-53hr 0.56 >More info 0.31 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
234 Col-0 48 hpi 0.50 >More info 0.37 >More info Col-0 uninoculated Original data GEO bulk
235 OH1 0.52 >More info 0.35 >More info Col-0 leaves Original data GEO bulk
236 P35S:rGRF3 0.60 >More info 0.27 >More info WS Original data GEO bulk
237 Bur-0-1h IAA 0.60 >More info 0.27 >More info Bur-0h IAA whole plant Original data GEO bulk
238 UV Stress 24 h (shoot) 0.36 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
239 siliques AtHb1 control 0.35 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
240 ani1 T0.5 -0.57 >More info -0.30 >More info WT T0.5 root tissue Original data GEO bulk
241 Te 1d 0.57 >More info 0.30 >More info Te CA Leaves Original data
242 D2O 0.59 >More info 0.27 >More info H2O seedling Original data GEO bulk
243 leaf blade in D 0.50 >More info 0.36 >More info leaf blade in WL leaf blades Original data GEO bulk
244 csn5 (csn5a-2 csn5b) light 0.52 >More info 0.33 >More info WT light Original data GEO bulk
245 penta Alternaria 3dpi 0.63 >More info 0.22 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
246 toc1-1-77hr 0.56 >More info 0.28 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
247 treated group 0.57 >More info 0.27 >More info Control group Original data
248 GO5; 0h switch to ambient CO2 concentrations; -0.60 >More info -0.24 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
249 rao1-1 3h antimycin A -0.61 >More info -0.23 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
250 pad4-PsmES4326-24hpi -0.59 >More info -0.25 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
251 Col laser microdissected 5 dpi 0.26 >More info 0.58 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
252 Root -P -0.66 >More info -0.17 >More info Root Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
253 WT in -N 0.54 >More info 0.29 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
254 pmr5 0.31 >More info 0.52 >More info Col-0 Original data GEO bulk
255 root control pSHR -0.62 >More info -0.21 >More info root control total control root Original data GEO bulk
256 mkk1/mkk2 24h BTH rep 0.56 >More info 0.26 >More info Col-0 24h BTH rep Original data GEO bulk
257 ASL9-ox -0.52 >More info -0.30 >More info WT aerial parts of seedlings Original data GEO bulk
258 root hypoxia pSHR -0.58 >More info -0.24 >More info root hypoxia total hypoxia root Original data GEO bulk
259 albino Ds13-2198-1 -0.50 >More info -0.31 >More info control Original data GEO bulk
260 Col 3d 0.54 >More info 0.27 >More info Col CA Leaves Original data
261 Col-Luc WT 3h antimycin A 0.53 >More info 0.28 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
262 pXVE:HA-EDM2-a untreated -0.20 >More info -0.61 >More info Col-0 untreated seedlings Original data GEO bulk
263 WT roots - Fe 0.63 >More info 0.17 >More info WT roots + Fe Roots Original data GEO bulk
264 gai Flg22 2h -0.56 >More info -0.24 >More info Laer Flg22 2h leaf discs Original data GEO bulk
265 MPK6 ox Shoot Hypoxia 0.51 >More info 0.29 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
266 HairpinZ 4 h (leaf) 0.83 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
267 camta2/3 warm 0.50 >More info 0.29 >More info WT warm entire aerial part Original data GEO bulk
268 Botrytis cinerea 48h 0.53 >More info 0.26 >More info control 48h Original data GEO bulk
269 npr1-PsmES4326-24hpi -0.56 >More info -0.23 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
270 wnk8-1 untreated -0.26 >More info -0.53 >More info Col-0 untreated seedlings Original data GEO bulk
271 sni1 0.27 >More info 0.52 >More info WT Original data GEO bulk
272 shoots WT 0uM Fe 0.54 >More info 0.24 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
273 ANAC102 knock-out -0.21 >More info -0.56 >More info Col-0 Original data GEO bulk
274 root cap pGL2 0h BL 0.61 >More info 0.15 >More info WR 35S 0h BL brassinosteroid root Original data
275 Truncated AC2 T2 -0.61 >More info -0.15 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
276 gai Control 0.53 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
277 Col-0 SA 0.56 >More info 0.20 >More info Col-0 Original data GEO bulk
278 Col-0 35S:MBS1 HL 0h -0.50 >More info -0.25 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
279 eds16 whole leaf 0h UI -0.25 >More info -0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
280 Elevated CO2 leaf primordia 0.16 >More info 0.59 >More info Ambient CO2 leaf primordia leaf primordia Original data
281 pvip1 pvip2 seedling 0.76 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
282 Nicotinamide-49hr 0.56 >More info 0.17 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
283 rao1-2 3h antimycin A -0.51 >More info -0.22 >More info Col-Luc WT 3h antimycin A 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
284 aerial organ callus inducing medium 48 h 0.61 >More info 0.12 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
285 root cap pGL2(root cap pGL2BRI1) 3h BL 0.62 >More info 0.10 >More info root cap pGL2(root cap pGL2BRI1) 0h BL brassinosteroid root Original data
286 WT mitomycin C 0.52 >More info 0.20 >More info WT mock shoot apical meristem Original data
287 Heat shock optimum 0.07 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
288 mil4 BTH 0.54 >More info 0.17 >More info Col BTH rosettes Original data GEO bulk
289 esd7-1 -0.16 >More info -0.55 >More info Ler seedlings Original data GEO bulk
290 GV3101 6dpi 0.53 >More info 0.18 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
291 RGA-GR-DEX 0.14 >More info 0.57 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
292 Col-0 low oxygen 0.55 >More info 0.15 >More info Col-0 Original data GEO bulk
293 wrky33 mock 0.56 >More info 0.13 >More info WT mock 14 hour mock control leaves Original data
294 IAA Treated -0.51 >More info -0.18 >More info Negative Control Original data GEO bulk
295 Pst-DC3000(hrpA)-4hpi -0.18 >More info -0.51 >More info Pst-DC3000-4hpi Original data GEO bulk
296 AFB1 0h 0.54 >More info 0.14 >More info WT 0h Leaf tissue Original data GEO bulk
297 bZIP1ko mutant N-Light- -0.50 >More info -0.17 >More info WT-sib N-Light- whole plant Original data GEO bulk
298 pad2-PsmES4326-24hpi -0.54 >More info -0.13 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
299 SA Treated 0.58 >More info 0.08 >More info Water Original data GEO bulk
300 SHR-GR Time 1H Dex 0.61 >More info 0.04 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
301 root control pWOL -0.56 >More info -0.09 >More info root control total control root Original data GEO bulk
302 slr-1 0h NAA 0.55 >More info 0.10 >More info Col-0 0h NAA Original data GEO bulk
303 Sha-3h IAA 0.53 >More info 0.11 >More info Sha-0h IAA whole plant Original data GEO bulk
304 SHR-GR Time 3H Dex 0.65 >More info -0.01 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
305 low CO2 + light 0.54 >More info 0.10 >More info normal CO2 + light Original data GEO bulk
306 HSP90 Reduced RNAi-A2 0.14 >More info 0.50 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
307 IAA19mII over-expressor IAA Treated 0.52 >More info 0.10 >More info empty vector IAA Treated Original data GEO bulk
308 ani1 T16 -0.53 >More info -0.09 >More info WT T16 root tissue Original data GEO bulk
309 4C 1h -0.07 >More info 0.69 >More info 4C 0h Original data GEO bulk
310 35S-MIF1 dark grown 0.56 >More info 0.05 >More info Dark-grown WT control Original data GEO bulk
311 Root P recovery 0.53 >More info 0.08 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
312 DUO1 induced 12h -0.53 >More info -0.08 >More info 12hr-not-induced whole plant Original data GEO bulk
313 root cap pGL2(root cap pGL2BRI1) 0h BL 0.51 >More info 0.09 >More info WR 35S 0h BL brassinosteroid root Original data
314 entire vegetative rosette -0.60 >More info 0.01 >More info Col-0 Mock WL entire vegetative rosette Original data
315 stele pSHR 0h BL -0.55 >More info -0.03 >More info WR 35S 0h BL brassinosteroid root Original data
316 21h-DC3000 avrRpm1 -0.55 >More info -0.03 >More info 21h-DC3000 leaves Original data GEO bulk
317 Mutant sav3-2 (WL) 0.07 >More info 0.51 >More info Col-0 (WL) Original data GEO bulk
318 sav3-2 light 0.07 >More info 0.51 >More info Col-0 light seedlings Original data GEO bulk
319 aerial organ callus inducing medium 96 h 0.50 >More info 0.07 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
320 Col-0 24hpi A. brassicicola 0.54 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
321 mp-B4149 mutant IAA -0.50 >More info -0.06 >More info GR-bdl IAA Original data GEO bulk
322 AtMYB30-ox 2-4h Xanthomonas 0.66 >More info -0.11 >More info WT 2-4h Xanthomonas Original data GEO bulk
323 Laer pretreat JA Flg22 2h 0.58 >More info -0.04 >More info Laer pretreat water control leaf discs Original data GEO bulk
324 Whole root - low pH 1H -0.02 >More info 0.55 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
325 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
326 ACN1-2 0.00 >More info 0.52 >More info col-7 Original data GEO bulk
327 Laer pretreat GA Flg22 2h 0.67 >More info -0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
328 pif3 Dark 0h -0.65 >More info 0.15 >More info WT Dark 0h etiolated seedling Original data GEO bulk
329 Col PSTDC3000 24h 0.61 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
330 DUO1 induced 6h -0.51 >More info 0.03 >More info 6hr-not-induced whole plant Original data GEO bulk
331 root control pSultr2:2 -0.51 >More info 0.04 >More info root control total control root Original data GEO bulk
332 FarRed Light 45min 0.07 >More info -0.54 >More info White Light 45min Original data Light treatments
333 ALC Toc1 light-light Mock -0.53 >More info 0.09 >More info Col light-light Mock no ethanol Original data GEO bulk
334 gapcp1gapcp2 ABA 0.09 >More info -0.50 >More info WT ABA ABA seedling Original data GEO bulk
335 Callus -0.11 >More info 0.52 >More info Control for tissue data callus Original data GEO bulk
336 coi1 0.10 >More info -0.51 >More info Col-0 Leaves Original data GEO bulk
337 P. infestans 6 h (leaf) 0.55 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
338 Laer pretreat GA Flg22 0h 0.67 >More info -0.27 >More info Laer pretreat water control leaf discs Original data GEO bulk
339 bri1-116 -0.33 >More info 0.73 >More info Col seedling Original data GEO bulk
340 WT NAA 1h 0.64 >More info -0.27 >More info WT 0h Leaf tissue Original data GEO bulk
341 Col 8h 0.50 >More info -0.14 >More info Col CA Leaves Original data
342 Mature roots -0.14 >More info 0.50 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
343 cortex -0.14 >More info 0.50 >More info Control for tissue data cortex Original data GEO bulk
344 seed germinating in countinuous light 24h SL -0.34 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
345 GO5; harvested 8h continiously maintained in high
CO2;		 -0.55 >More info 0.26 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
346 Red/FR Light45min -0.32 >More info 0.54 >More info FarRed Light 45min Original data Light treatments
347 Seeds stage3 with siliques -0.55 >More info 0.34 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
348 Inflorescences ler -0.54 >More info 0.35 >More info Control for tissue data inflorescences Original data GEO bulk
349 flower-buds -0.51 >More info 0.32 >More info Control for tissue data Original data GEO bulk
350 Flower (stage12) -0.52 >More info 0.33 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
351 ovule -0.53 >More info 0.35 >More info Control for tissue data ovule Original data GEO bulk
352 Pedicels stage15 -0.53 >More info 0.35 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
353 lec1-1 24h post-fertilization Seed -0.52 >More info 0.34 >More info Control for tissue data Original data GEO bulk
354 Stem 1st node -0.55 >More info 0.38 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
355 siliques -0.54 >More info 0.37 >More info Control for tissue data Original data GEO bulk
356 in vivo pollen tube -0.50 >More info 0.33 >More info Control for tissue data pollen tube Original data GEO bulk
357 lec1-1 Post-Mature Green Seed -0.50 >More info 0.33 >More info Control for tissue data Original data GEO bulk
358 unpollinated pistil -0.51 >More info 0.34 >More info Control for tissue data pistil Original data GEO bulk
359 Apex 5DAS -0.52 >More info 0.36 >More info Control for tissue data Original data GEO bulk
360 WT cotyledons -0.54 >More info 0.38 >More info Control for tissue data cotyledons Original data
361 Expanding leaf -0.50 >More info 0.34 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
362 Shoot apex transition (before bolting) -0.52 >More info 0.37 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
363 lec1-1 Globular Stage Seed -0.51 >More info 0.39 >More info Control for tissue data Original data GEO bulk
364 Apex 14DAS -0.51 >More info 0.39 >More info Control for tissue data Original data GEO bulk
365 Rosette leaf No12 -0.50 >More info 0.39 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
366 flowers -0.50 >More info 0.39 >More info Control for tissue data Original data GEO bulk
367 Shoot apex inflorescence (after bolting) -0.54 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
368 Shoot apex vegetative -0.50 >More info 0.40 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages