4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on LTN008-2 aza-dc
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Score Experiment Correlation from
LTN008-2 aza-dc		 Correlation to
LTN008-2 aza-dc		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 LTN008-2 aza-dc 1.00 >More info 1.00 >More info LTN012-2 Mock Original data
2 csn5 (csn5a-2 csn5b) light 0.72 >More info 0.75 >More info WT light Original data GEO bulk
3 DFPM 0.70 >More info 0.75 >More info control Original data GEO bulk
4 seedlings-week-old RECA1-overexpressing
transgenic		 0.65 >More info 0.79 >More info seedlings-week-old Col-0 seedlings Original data
5 seedlings +5AC 0.71 >More info 0.72 >More info control seedlings 10-day old whole seedling Original data GEO bulk
6 ataf1-1 mutant Col-0 Bgh inoculated 0.64 >More info 0.78 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
7 Col whole leaf 7dpi 0.65 >More info 0.76 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
8 efr-1 +elf18 10h -0.63 >More info -0.78 >More info WT +elf18 10h elf18 Original data GEO bulk
9 ice1 control 0.66 >More info 0.74 >More info WT control Original data GEO bulk
10 csn3-1 light 0.71 >More info 0.69 >More info WT light Original data GEO bulk
11 pepr1-1 Pepr2-3 +Pep2 2h -0.63 >More info -0.77 >More info WT +Pep2 2h Pep2 Original data GEO bulk
12 del1-1 mutant 5d uninfected 0.60 >More info 0.79 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
13 BLM+INA 0.62 >More info 0.77 >More info CK BLM and INA seedling Original data
14 AgNO3 3 h 0.61 >More info 0.78 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
15 35S:RPS4 eds1-2 8h -0.63 >More info -0.76 >More info 35S:RPS4 8h leaves Original data
16 CMV-WT 0.62 >More info 0.76 >More info Mock-At Aerial tissues Original data GEO bulk
17 toc1-1-49hr 0.66 >More info 0.72 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
18 GST NPP1 4 h (leaf) 0.61 >More info 0.77 >More info Mock 4 h (leaf) Original data Elicitor treatments
19 smg7b-1 0.62 >More info 0.76 >More info WT whole plant Original data GEO bulk
20 35S:RPS4 eds1-2 24h -0.63 >More info -0.75 >More info 35S:RPS4 24h leaves Original data
21 anac017-2 AntimycinA 3h -0.62 >More info -0.76 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
22 Cor hrpS 10h 0.63 >More info 0.75 >More info Mock 10h Cor hrpS Original data GEO bulk
23 ice1 6H Cold 0.63 >More info 0.74 >More info WT 6H Cold Original data GEO bulk
24 bak1-3 +Pep2 10h 0.66 >More info 0.71 >More info WT +Pep2 10h Pep2 Original data GEO bulk
25 hrpA 7h 0.61 >More info 0.76 >More info Mock 7h hrpA Original data GEO bulk
26 GST 4 h (leaf) 0.54 >More info 0.83 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 SLWF infested 0.59 >More info 0.78 >More info SLWF uninfested rosette tissue Original data GEO bulk
28 Sulfometuron EC50 0.66 >More info 0.71 >More info Carrier Original data GEO bulk
29 Elevated CO2 AMPLE N DAY 0.55 >More info 0.81 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
30 eds16 whole leaf 5dpi -0.58 >More info -0.78 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
31 sid2-1 cold -0.59 >More info -0.77 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
32 S15-118 0.54 >More info 0.82 >More info wt Original data GEO bulk
33 Col whole leaf 5dpi 0.58 >More info 0.78 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
34 col-5 hrpA 12h 0.57 >More info 0.78 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
35 upf3 0.62 >More info 0.73 >More info WT whole plant Original data GEO bulk
36 B.cinerea 18 h infection 0.57 >More info 0.78 >More info Mock 18 h Original data Botrytis cinerea infection
37 Botrytis cinerea 18h 0.57 >More info 0.78 >More info control 18h Original data GEO bulk
38 WT-SA 0.59 >More info 0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
39 UV 0.64 >More info 0.70 >More info WT aerial region Original data GEO bulk
40 WT powdery mildew 0.61 >More info 0.73 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
41 HopZ1a treated 0.59 >More info 0.75 >More info col Original data GEO bulk
42 irradiated leaf (WT 1d) 0.58 >More info 0.75 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
43 E.coli TUV86 2 fliC 7h 0.58 >More info 0.75 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
44 S58-2 0.56 >More info 0.77 >More info wt Original data GEO bulk
45 seedlings protease IV 0.61 >More info 0.72 >More info seedlings nontreated control whole seedling Original data
46 Col ozone 2d 0.55 >More info 0.78 >More info Col clean-air 2d ozone Original data GEO bulk
47 sni1 0.54 >More info 0.78 >More info WT Original data GEO bulk
48 Primisulfuron EC50 0.61 >More info 0.71 >More info Carrier (primisulfuron) Original data GEO bulk
49 upf1 0.62 >More info 0.70 >More info WT whole plant Original data GEO bulk
50 cpr5scv1 0.57 >More info 0.75 >More info WT(COL) Original data GEO bulk
51 aba3-1 0.50 >More info 0.82 >More info wt Original data GEO bulk
52 gh3.5-1D 48 hpi 0.60 >More info 0.72 >More info Col-0 uninoculated Original data GEO bulk
53 Triazolopyrimidine EC50 0.61 >More info 0.71 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
54 toc1-1-53hr 0.57 >More info 0.75 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
55 WT 2-4h Xanthomonas 0.55 >More info 0.76 >More info WT T0 Original data GEO bulk
56 E.coli 0157 H7 7h 0.57 >More info 0.74 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
57 ein2-1 9 hpi A. brassicicola 0.62 >More info 0.69 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
58 cpr5npr1 0.55 >More info 0.76 >More info WT(COL) Original data GEO bulk
59 hrpA fliC 7h 0.57 >More info 0.74 >More info Mock 7h hrpA fliC Original data GEO bulk
60 pvip1 pvip2 0.60 >More info 0.71 >More info Col-0 whole rosettes Original data GEO bulk
61 csn4-1 dark 0.68 >More info 0.63 >More info WT light Original data GEO bulk
62 cpr5 0.56 >More info 0.74 >More info WT(COL) Original data GEO bulk
63 UV Stress 24 h (shoot) 0.52 >More info 0.78 >More info Stress mock 24 h (shoot) Original data Stress treatments
64 hrcC 0.56 >More info 0.74 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
65 Flagellin 4 h (leaf) 0.56 >More info 0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
66 TNT-seedlings 0.55 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
67 35S::ERF104 Flg22 4h 0.56 >More info 0.74 >More info 35S::ERF104 H2O 4h Original data GEO bulk
68 Col-0 9 hpi A. brassicicola 0.60 >More info 0.70 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
69 CMP 24hr 0.60 >More info 0.70 >More info Acetone 24hr root Original data GEO bulk
70 Elevated CO2 AMPLE N NIGHT 0.52 >More info 0.77 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
71 AvrRpt2 Col-0 6hpi 0.60 >More info 0.69 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
72 Mutant siz1-3 (Drought) 0.60 >More info 0.69 >More info Col-0 (Drought) Original data GEO bulk
73 ceh1 mutant 0.56 >More info 0.73 >More info Parent line Original data
74 cpr5 0.58 >More info 0.71 >More info WT seedling Original data GEO bulk
75 Col ozone 3h 0.51 >More info 0.78 >More info Col clean-air 3h ozone Original data GEO bulk
76 siz1-3 drought 0.60 >More info 0.69 >More info Col-0 drought Original data GEO bulk
77 IMI 4mM 0.62 >More info 0.67 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
78 edr1 18 h powdery mildew 0.56 >More info 0.73 >More info Col-0 18 h powdery mildew Original data GEO bulk
79 Chitosan 3h Treatment 0.62 >More info 0.67 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
80 pepr1-1 Pepr2-3 +Pep2 10h -0.57 >More info -0.71 >More info WT +Pep2 10h Pep2 Original data GEO bulk
81 chito-octamer 0.57 >More info 0.70 >More info Col Mock Original data GEO bulk
82 msh1 albino 0.60 >More info 0.67 >More info WT aerial part Original data GEO bulk
83 CMP 4hr 0.62 >More info 0.65 >More info Acetone 4hr root Original data GEO bulk
84 HopZ1a treated ulp1c ulp1d 0.57 >More info 0.70 >More info col Original data GEO bulk
85 WT Col-0 Bgh inoculated 0.54 >More info 0.73 >More info WT Col-0 Un-inoculated Original data GEO bulk
86 Phaseolicola 2 h (leaf) 0.50 >More info 0.76 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
87 Col-0 INA 48h 0.51 >More info 0.75 >More info Col-0 MOCK 48h Original data GEO bulk
88 P.p 2.5hai 0.53 >More info 0.73 >More info At-Control roots Original data GEO bulk
89 WT-NOCO2 INFECTED 0.55 >More info 0.71 >More info WT-MOCK Original data GEO bulk
90 mpk6-ko Flg22 4h 0.55 >More info 0.71 >More info mpk6-ko H2O 4h Original data GEO bulk
91 Col-Luc WT 3h antimycin A 0.56 >More info 0.70 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
92 Shoot -Cs 0.46 >More info 0.80 >More info Control-shoot Original data GEO bulk
93 toc1-1-65hr 0.64 >More info 0.61 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
94 SA 0.56 >More info 0.69 >More info WT mock Whole seedling Original data GEO bulk
95 Cycloheximide 3 h 0.55 >More info 0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
96 npr1-1 SA -0.56 >More info -0.68 >More info Col-0 SA complete seedling Original data
97 downy mildew cotyledons late stage 0.56 >More info 0.68 >More info mock inoculated Cotyledons Original data GEO bulk
98 Imidazolinone EC50 0.57 >More info 0.67 >More info Carrier (Imidazolinone) Original data GEO bulk
99 pad4-PsmES4326-24hpi -0.58 >More info -0.66 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
100 Fenclorim 4hr 0.61 >More info 0.63 >More info Acetone 4hr root Original data GEO bulk
101 Elevated CO2 fully expanded leaf 0.55 >More info 0.68 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
102 irradiated leaf (cmt 1d) 0.52 >More info 0.71 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
103 R. solani AG2-1 0.54 >More info 0.69 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
104 smg5-2 0.60 >More info 0.63 >More info WT whole plant Original data GEO bulk
105 Mutant siz1-3 0.56 >More info 0.67 >More info Col-0 Original data GEO bulk
106 A. thaliana-A. lyrata hybrid -0.51 >More info -0.72 >More info A. thaliana mature leaves before flowering Original data GEO bulk
107 pnp1-1 1wk +P 0.61 >More info 0.62 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
108 cpr5npr1svi1 0.51 >More info 0.72 >More info WT(COL) Original data GEO bulk
109 siz1-3 control 0.56 >More info 0.67 >More info Col-0 control Original data GEO bulk
110 vtc1 (II) 0.57 >More info 0.66 >More info Col (II) rosette Original data GEO bulk
111 Col-0 48 hpi 0.54 >More info 0.68 >More info Col-0 uninoculated Original data GEO bulk
112 lht1 untreated 0.54 >More info 0.68 >More info WT untreated untreated leaf Original data GEO bulk
113 WT chitooctaose 0.54 >More info 0.68 >More info WT water Original data GEO bulk
114 pmr5 pmr6 0.57 >More info 0.65 >More info Col-0 Original data GEO bulk
115 erf104-ko Flg22 4h 0.52 >More info 0.70 >More info erf104-ko H2O 4h Original data GEO bulk
116 OH1 0.53 >More info 0.69 >More info Col-0 leaves Original data GEO bulk
117 nia1nia2 0.59 >More info 0.63 >More info Col-0 whole seedlings Original data GEO bulk
118 CHS-silenced type -0.56 >More info -0.65 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
119 Laer Flg22 2h 0.56 >More info 0.65 >More info Laer Control leaf discs Original data GEO bulk
120 P.p 30hai 0.55 >More info 0.66 >More info At-Control roots Original data GEO bulk
121 mkk1/mkk2 control rep 0.57 >More info 0.64 >More info Col-0 Time 0 rep Original data GEO bulk
122 col-5 DC3000 12h 0.50 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
123 camta3-2 0.42 >More info 0.79 >More info WT Original data GEO bulk
124 dor drought 0.45 >More info 0.76 >More info WT drought Original data GEO bulk
125 sid2 -0.54 >More info -0.66 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
126 toc1-1-77hr 0.65 >More info 0.55 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
127 edr1 36 h powdery mildew 0.55 >More info 0.65 >More info Col-0 36 h powdery mildew Original data GEO bulk
128 WT flg22 2h 0.55 >More info 0.65 >More info WT 0h Leaf tissue Original data GEO bulk
129 R. solani AG8 0.54 >More info 0.66 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
130 Lipopolysaccaride4 h (leaf) 0.52 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
131 camta2/3 warm 0.51 >More info 0.69 >More info WT warm entire aerial part Original data GEO bulk
132 Col-0-avrB-6h 0.51 >More info 0.69 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
133 RPL18 TuMV inoculated total RNA 0.49 >More info 0.71 >More info mock inoculated total RNA PO Original data GEO bulk
134 RPL18 TuMV inoculated polysomal RNA 0.51 >More info 0.68 >More info mock inoculated polysomal RNA PO Original data GEO bulk
135 bZIP1ko mutant N+Light- 0.59 >More info 0.60 >More info WT-sib N+Light- whole plant Original data GEO bulk
136 WT AntimycinA 3h 0.50 >More info 0.69 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
137 PAHs stress 0.54 >More info 0.65 >More info exp control phenanthrene whole plants Original data GEO bulk
138 ARR22-ox (t-zeatin 3 h) 0.60 >More info 0.59 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
139 toc1-1-85hr 0.47 >More info 0.72 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
140 gh3.5D uninoculated -0.48 >More info -0.71 >More info Col-0 48 hpi Original data GEO bulk
141 sta1 0.62 >More info 0.56 >More info WT Original data GEO bulk
142 ice1 24H Cold 0.54 >More info 0.64 >More info WT 24H Cold Original data GEO bulk
143 Col BTH 0.51 >More info 0.67 >More info Col rosettes Original data GEO bulk
144 P.p 10.5hai 0.54 >More info 0.64 >More info At-Control roots Original data GEO bulk
145 WT +elf18 10h 0.55 >More info 0.63 >More info WT untreated elf18 Original data GEO bulk
146 Cor 10h 0.51 >More info 0.67 >More info Mock 10h Cor Original data GEO bulk
147 Col leaves 48h LT 0.57 >More info 0.61 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
148 cop1 Seedling BL 0.48 >More info 0.70 >More info WT Seedling BL Original data GEO bulk
149 wrky33 Bc inoculation 14h 0.60 >More info 0.57 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
150 P.p 6hai 0.54 >More info 0.63 >More info At-Control roots Original data GEO bulk
151 miR393 flg22 2h 0.51 >More info 0.66 >More info WT 0h Leaf tissue Original data GEO bulk
152 WT in -N 0.50 >More info 0.67 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
153 Col0-PsmES4326-24hpi 0.56 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
154 ABA DFPM 0.59 >More info 0.58 >More info control Original data GEO bulk
155 flu over-tAPX 0.49 >More info 0.68 >More info WT Col Original data GEO bulk
156 Nicotinamide-81hr 0.54 >More info 0.62 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
157 Mature callus 0.54 >More info 0.62 >More info Young callus hypocotyls Original data GEO bulk
158 WT +elf18 2h 0.49 >More info 0.67 >More info WT untreated elf18 Original data GEO bulk
159 Botrytis cinerea 48h 0.58 >More info 0.58 >More info control 48h Original data GEO bulk
160 toc1-1-61hr 0.57 >More info 0.59 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
161 Col whole leaf amplified 5 dpi 0.47 >More info 0.69 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
162 WT 3h -P 0.42 >More info 0.74 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
163 oligomycin 4 h 0.53 >More info 0.62 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
164 BLM 0.52 >More info 0.63 >More info CK BLM seedling Original data
165 WT Bc inoculation 14h 0.56 >More info 0.59 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
166 Pto inoculated 0.53 >More info 0.62 >More info col Original data GEO bulk
167 Mutant gh3.5-1D (AvrRpt2) 0.50 >More info 0.65 >More info Col-0 (AvrRpt2) Original data GEO bulk
168 Te ozone 0.57 >More info 0.58 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
169 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.56 >More info -0.59 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
170 eds16 whole leaf 7dpi -0.50 >More info -0.65 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
171 Laer pretreat GA Flg22 1h 0.44 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
172 OE WRKY63.3 high light 0.44 >More info 0.71 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
173 Laer Flg22 1h 0.53 >More info 0.61 >More info Laer Control leaf discs Original data GEO bulk
174 ice1 3H Cold 0.61 >More info 0.53 >More info WT 3H Cold Original data GEO bulk
175 bio4-1 mutant watered00µM biotin leaves -0.46 >More info -0.68 >More info bio4-1 mutant leaves leaves Original data GEO bulk
176 camta1/2/3 warm 0.49 >More info 0.65 >More info WT warm entire aerial part Original data GEO bulk
177 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.57 >More info 0.57 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
178 Col-0 Flg22 4h 0.42 >More info 0.72 >More info Col-0 H2O 4h Original data GEO bulk
179 P.syringae AvrRpt2 4 h (leaf) 0.45 >More info 0.68 >More info Mock 4 h (leaf) Original data Elicitor treatments
180 CLO 4mM 0.55 >More info 0.58 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
181 Leafminer locally damaged thaliana seedlings 0.54 >More info 0.59 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
182 eds16 whole leaf 6hpi -0.50 >More info -0.63 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
183 cdpk6-yfp 0.55 >More info 0.58 >More info Kan seedlings Original data GEO bulk
184 Laer Flg22+GA 1h 0.55 >More info 0.58 >More info Laer Control leaf discs Original data GEO bulk
185 Laer treat paclobutrazol (PAC) 0.51 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
186 Shoot -K 0.51 >More info 0.62 >More info Control-shoot Original data GEO bulk
187 mkk1/mkk2 24h BTH rep 0.52 >More info 0.61 >More info Col-0 24h BTH rep Original data GEO bulk
188 toc1-1-57hr 0.51 >More info 0.62 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
189 K starvation (shoot) 0.51 >More info 0.62 >More info Ws (shoot) Original data GEO bulk
190 flu 0.47 >More info 0.66 >More info WT Col Original data GEO bulk
191 msh1 recA3 heat shock 0.44 >More info 0.69 >More info WT heat shock above-ground parts Original data GEO bulk
192 camta1/3 warm 0.43 >More info 0.70 >More info WT warm entire aerial part Original data GEO bulk
193 Col-0 under 4 days salt 0.53 >More info 0.59 >More info Col-0 under control 4 days salt treatment rosette Original data
194 camta1/2/3 24h cold 0.50 >More info 0.62 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
195 Octopus overexpressor 35SDYG25 0.48 >More info 0.64 >More info WS Original data GEO bulk
196 Col-0 INA 6d 0.47 >More info 0.65 >More info Col-0 MOCK 6d Original data GEO bulk
197 Col-0 DCA 48h 0.39 >More info 0.73 >More info Col-0 MOCK 48h Original data GEO bulk
198 WT+chitooctaose 0.35 >More info 0.77 >More info WT+water chitooctaose seedlings Original data GEO bulk
199 A6 mutant 0.47 >More info 0.65 >More info WT rosette leaves Rosette leaves Original data GEO bulk
200 atmyc2 cop1 Seedling BL 0.45 >More info 0.67 >More info WT Seedling BL Original data GEO bulk
201 chito-tetramer 0.43 >More info 0.69 >More info Col Mock Original data GEO bulk
202 Whole root - low pH 12H 0.43 >More info 0.69 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
203 Mutant axr3-1 0.43 >More info 0.68 >More info Col Original data GEO bulk
204 rosette Dark Wounded 0.45 >More info 0.66 >More info rosette Dark Control Original data GEO bulk
205 pmr5 0.46 >More info 0.65 >More info Col-0 Original data GEO bulk
206 WT cold 0.51 >More info 0.60 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
207 Cor 24h 0.53 >More info 0.58 >More info Mock 24h Cor Original data GEO bulk
208 Nicotinamide-85hr 0.49 >More info 0.62 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
209 vtc2 (I) 0.49 >More info 0.62 >More info Col (I) rosette Original data GEO bulk
210 dde2-2 9 hpi A. brassicicola 0.49 >More info 0.62 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
211 aox1a:rpoTmp untreated 0.47 >More info 0.64 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
212 Leafminer damaged seedlings 0.54 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
213 ein5-1 ski2-3 0.53 >More info 0.57 >More info Col-0 aerial tissue Original data
214 pnp1-1 3h +P 0.50 >More info 0.60 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
215 Laer Flg22+GA 2h 0.54 >More info 0.56 >More info Laer Control leaf discs Original data GEO bulk
216 9 hr Hypoxia 1 hr recovery Total RNA 0.51 >More info 0.59 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
217 root Dosed gold 0.53 >More info 0.57 >More info root No gold .125 mM gold 24 h roots Original data
218 coi1-16 ein2 sid2 ozone 0.59 >More info 0.51 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
219 coi1-16 ein2 sid2 ctrl -0.54 >More info -0.56 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
220 0.125 mM gold 24 h 0.53 >More info 0.57 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
221 8h-DC3000 avrRpm1 0.55 >More info 0.55 >More info 8h-DC3000 leaves Original data GEO bulk
222 npr1 sni1 brca2a SA -0.44 >More info -0.66 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
223 S14-150 0.46 >More info 0.64 >More info wt Original data GEO bulk
224 Col-0 V. longisporum-inoculated 48 hpi 0.40 >More info 0.70 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
225 WT seedlings MV 0.53 >More info 0.56 >More info WT seedlings control Seedlings Original data GEO bulk
226 oas-a1.1 Cd 18h 0.41 >More info 0.68 >More info Cd 18h root Root Original data GEO bulk
227 anac017-1 H2O2 3h -0.50 >More info -0.59 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
228 DC3000 2 h (leaf) 0.47 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
229 WT flg22 1h 0.49 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
230 cop1 Seedling BL+ABA 0.55 >More info 0.53 >More info WT Seedling BL+ABA Original data GEO bulk
231 Bur-0-3h IAA 0.52 >More info 0.56 >More info Bur-0h IAA whole plant Original data GEO bulk
232 Wounding Stress3 h (shoot) 0.49 >More info 0.59 >More info Stress mock 3 h (shoot) Original data Stress treatments
233 WT+H2O2 0.46 >More info 0.62 >More info WT H2O2 Original data GEO bulk
234 col-5 hrpA 2h 0.48 >More info 0.60 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
235 35S:RPS4 eds1-2 2h -0.34 >More info -0.74 >More info 35S:RPS4 2h leaves Original data
236 Osmotic Stress 24 h (shoot) 0.52 >More info 0.55 >More info Stress mock 24 h (shoot) Original data Stress treatments
237 Seedling KUA1-IOX est 0.55 >More info 0.52 >More info Seedling KUA1-IOX mock Original data
238 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.52 >More info 0.55 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
239 lht1 PstDC3000 48h 0.53 >More info 0.54 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
240 camta3-1 0.43 >More info 0.64 >More info WT Original data GEO bulk
241 npr1-PsmES4326-24hpi -0.44 >More info -0.63 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
242 Nicotinamide-61hr 0.50 >More info 0.57 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
243 rpoTmp(line) MLD stressed 0.50 >More info 0.57 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
244 bio4-1 mutant leaves 0.50 >More info 0.57 >More info WT leaves leaves Original data GEO bulk
245 aox1a(line) MLD stressed 0.50 >More info 0.57 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
246 wavy 0.38 >More info 0.69 >More info WT Original data GEO bulk
247 Light 3day wt -0.50 >More info -0.56 >More info 0h wt Original data
248 Bur-0-1h IAA 0.52 >More info 0.54 >More info Bur-0h IAA whole plant Original data GEO bulk
249 arf2 brz -0.43 >More info -0.63 >More info arf2 mock Original data GEO bulk
250 eds16 whole leaf 0h UI -0.33 >More info -0.73 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
251 Nicotinamide-65hr 0.49 >More info 0.57 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
252 Fenclorim 24hr 0.49 >More info 0.57 >More info Acetone 24hr root Original data GEO bulk
253 plant (tga2-5-6) 4h control 0.51 >More info 0.54 >More info plant (Col-0) 4h control Original data GEO bulk
254 CT101 ozone 0.55 >More info 0.50 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
255 LTN005-2 TSA 0.54 >More info 0.51 >More info LTN012-2 Mock Original data
256 20d after anthesis 0.50 >More info 0.55 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
257 Col-0 ozone 0.52 >More info 0.53 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
258 Mutant tga2_5_6 0.51 >More info 0.54 >More info Col-0 Original data GEO bulk
259 penta Alternaria 3dpi 0.52 >More info 0.53 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
260 DC3000 24h 0.52 >More info 0.53 >More info Mock 24h DC3000 Original data GEO bulk
261 8hr-pH4.5 0.43 >More info 0.62 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
262 atgsnor1-1-avrB-6h 0.42 >More info 0.63 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
263 toc1-1-73hr 0.41 >More info 0.64 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
264 bHLH122 ox -0.37 >More info -0.68 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
265 CeO2 germinant -0.33 >More info -0.72 >More info Millipore Water germinant CeO2 seedling Original data
266 abi4 vtc2 (I) 0.48 >More info 0.57 >More info Col (I) rosette Original data GEO bulk
267 albino Ds13-2198-1 -0.47 >More info -0.58 >More info control Original data GEO bulk
268 ddm1 F6 inflorescence 0.35 >More info 0.70 >More info wt Col inflorescence unopened flower buds Original data
269 ABA control 0.50 >More info 0.54 >More info No ABA control Original data GEO bulk
270 toc1-1-69hr 0.51 >More info 0.53 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
271 9 hr Hypoxia 1 hr recovery IP RNA 0.51 >More info 0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
272 FOX line K19624 0.48 >More info 0.56 >More info empty vector control (T3) FOX lines Original data GEO bulk
273 Col whole leaf 5 dpi 0.44 >More info 0.60 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
274 miR393 flg22 1h 0.46 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
275 Stem tissue 5 days NAA 0.46 >More info 0.58 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
276 Whole root - low pH 24H 0.44 >More info 0.60 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
277 vte2-1 3d vernalization 0.41 >More info 0.63 >More info WT 3d vernalization Original data GEO bulk
278 Pst-DC3000(avrRpm1)-4hpi 0.48 >More info 0.56 >More info Pst-DC3000-4hpi Original data GEO bulk
279 atgsnor1-1 -0.54 >More info -0.49 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
280 Mutant coi1(leaf) -0.51 >More info -0.52 >More info Col-0 (leaf) Original data GEO bulk
281 cs26 short-day -0.41 >More info -0.62 >More info Leaves-WT-SD leaf Original data GEO bulk
282 Nicotinamide-53hr 0.48 >More info 0.55 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
283 shoots bhlh100/101 0uM Fe 0.49 >More info 0.54 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
284 INA 0.37 >More info 0.66 >More info CK INA seedling Original data
285 IRP1-OE-Fe--shoot 0.42 >More info 0.61 >More info COL-0-Fe--shoot shoot Original data
286 plant (tga2-5-6) 4h phytoprostane A1 0.50 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
287 SA 4mM 0.56 >More info 0.46 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
288 AvrRpm1 2 h (leaf) 0.33 >More info 0.69 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
289 Selenate (root) 0.42 >More info 0.60 >More info Ws (root) Original data GEO bulk
290 WT NAA/flg 1h 0.46 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
291 toc1-1-93hr 0.49 >More info 0.53 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
292 Nicotinamide-89hr 0.49 >More info 0.53 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
293 CAX1/CAX3 mutant 0.45 >More info 0.57 >More info Col whole plant Original data GEO bulk
294 ddm1 mutant seedlings 0.28 >More info 0.74 >More info control seedlings 10-day old whole seedling Original data GEO bulk
295 GA 0.37 >More info 0.65 >More info none GA Rosette Original data GEO bulk
296 Root Selenate 0.42 >More info 0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
297 Elevated CO2 expanding leaf 0.41 >More info 0.61 >More info Ambient CO2 expanding leaf expanding leaf Original data
298 hira-root -0.41 >More info -0.61 >More info WT-root root Original data
299 clf-28 swn-7 0.53 >More info 0.48 >More info Col whole plant Original data GEO bulk
300 nia1nia2noa1-2 0.53 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
301 apum23 0.48 >More info 0.53 >More info WT (Col-3) aerial parts Original data GEO bulk
302 WT 6H Cold 0.48 >More info 0.53 >More info WT control Original data GEO bulk
303 OE WRKY63.3 0.44 >More info 0.57 >More info OE WRKY40.4 none leaf Original data GEO bulk
304 col-5 DC3000-avrRpm 4h 0.45 >More info 0.56 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
305 pnp1-1 1wk -P 0.57 >More info 0.43 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
306 Oxidative Stress 3 h (root) -0.43 >More info -0.57 >More info Stress mock 3 h (root) Original data Stress treatments
307 35S-MIF1 light grown 0.43 >More info 0.57 >More info Light-grown WT control Original data GEO bulk
308 rosette Light Wounded 0.37 >More info 0.63 >More info rosette Light Control Original data GEO bulk
309 Nicotinamide-69hr 0.43 >More info 0.57 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
310 Nicotinamide-57hr 0.48 >More info 0.52 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
311 coi1-2 0.40 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
312 Col upon hypoxia 6 hrs 0.46 >More info 0.54 >More info Col upon normoxia hypoxia seedling roots Original data GEO bulk
313 WT 30μM arsenate 8 hours. 0.49 >More info 0.51 >More info WT control (not supplemented). Original data
314 Bur-0-30min IAA 0.51 >More info 0.48 >More info Bur-0h IAA whole plant Original data GEO bulk
315 5-Triiodobenzoic acid3 h 0.45 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
316 Salicylic Acid 3 h 0.38 >More info 0.61 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
317 Mutant sav3-2 (WL) 0.22 >More info 0.77 >More info Col-0 (WL) Original data GEO bulk
318 Mutant NahG(leaf) -0.41 >More info -0.58 >More info Col-0 (leaf) Original data GEO bulk
319 AFB1 flg22 1h 0.46 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
320 Nicotinamide-73hr 0.40 >More info 0.59 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
321 abi4-102 (II) 0.44 >More info 0.55 >More info Col (II) rosette Original data GEO bulk
322 6h +Pi -0.37 >More info -0.62 >More info 6h -Pi root Original data GEO bulk
323 35:SUB1A 0.49 >More info 0.50 >More info WT whole seedling Original data GEO bulk
324 WT 24H Cold 0.35 >More info 0.64 >More info WT control Original data GEO bulk
325 rcf1-1 cold 24h 0.35 >More info 0.64 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
326 rsa3-1 Na 24h 0.32 >More info 0.67 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
327 irradiated leaf (cmt 5d) 0.36 >More info 0.63 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
328 sav3-2 light 0.22 >More info 0.77 >More info Col-0 light seedlings Original data GEO bulk
329 WT-Dry 0.29 >More info 0.70 >More info WT-CK dehydration treatment 1h Original data
330 seedling 3h after Gamma WT 0.35 >More info 0.64 >More info seedling day 1 unirradiated WT 3h Original data
331 Cocultivation 8 hrs root 0.42 >More info 0.57 >More info Mock cocultivation 8 hrs root Root Original data
332 atmospheric CO2 high Mg shoot 0.55 >More info 0.43 >More info atmospheric CO2 normal Mg shoot Shoot Original data
333 AFB1 flg22 2h 0.54 >More info 0.44 >More info WT 0h Leaf tissue Original data GEO bulk
334 tor mutant glucose 0.52 >More info 0.46 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
335 safener treated 0.41 >More info 0.57 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
336 myb3 myb3r4d 0.35 >More info 0.63 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
337 Leaf wounded 0.26 >More info 0.72 >More info Leaf control vegetative leaf Original data GEO bulk
338 +1.6 mM Tween 20 1 h. 0.39 >More info 0.59 >More info +distilled water 1 h. Original data GEO bulk
339 4C 2h(SOIL) 0.29 >More info 0.69 >More info 4C 0h(SOIL) Original data GEO bulk
340 treated group 0.38 >More info 0.60 >More info Control group Original data
341 ERF96OE 0.42 >More info 0.56 >More info WT leaf Original data
342 Fe starvation 72 h 0.47 >More info 0.50 >More info Control Original data GEO bulk
343 whole roots -Fe 72 hour 0.47 >More info 0.50 >More info whole roots standard Original data GEO bulk
344 eds16 whole leaf 3dpi -0.45 >More info -0.52 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
345 miR393 0h -0.28 >More info -0.69 >More info WT 0h Leaf tissue Original data GEO bulk
346 mbd6 mutant thaliana 10-day-old seedling 0.46 >More info 0.51 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
347 whole roots -Fe 48 hour 0.44 >More info 0.52 >More info whole roots standard Original data GEO bulk
348 Col laser microdissected 5 dpi 0.36 >More info 0.60 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
349 Laer Alternaria 3dpi -0.36 >More info -0.60 >More info Laer Control leaf discs Original data GEO bulk
350 cs26 long day 0.42 >More info 0.54 >More info Leaves-WT-LD leaf Original data GEO bulk
351 total mRNA eif3k 0.39 >More info 0.57 >More info total mRNA WT aerial part Original data GEO bulk
352 gun1gun5 far-red pretreated -0.38 >More info -0.58 >More info WT far-red pretreated Original data GEO bulk
353 Dex-rga(delta17) 4h GA4+DEX -0.43 >More info -0.53 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
354 IRP1-OE-Ctrl--root 0.39 >More info 0.57 >More info COL-0-Ctrl--root root Original data
355 GO5; 8h switch to ambient CO2 concentrations; 0.34 >More info 0.62 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
356 pad2-PsmES4326-24hpi -0.40 >More info -0.55 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
357 cat2-hCO2 -0.51 >More info -0.44 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
358 WT +Pep2 2h 0.60 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
359 DC3000 hrcC 2 h (leaf) 0.35 >More info 0.60 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
360 Col-0 C2H4 24h 0.43 >More info 0.52 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
361 Nicotinamide-93hr 0.43 >More info 0.52 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
362 aerial organ callus inducing medium 48 h 0.42 >More info 0.53 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
363 dense canopy 0.34 >More info 0.61 >More info single (control) petiole Original data GEO bulk
364 ASL9-ox -0.40 >More info -0.54 >More info WT aerial parts of seedlings Original data GEO bulk
365 Chemically 0.26 >More info 0.68 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
366 ORS1 induced 0.34 >More info 0.60 >More info mock-induced rosette leaves Original data GEO bulk
367 npr1 sni1 SA 0.37 >More info 0.57 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
368 Glyphosate EC50 0.42 >More info 0.52 >More info Carrier (Glyphosate) Original data GEO bulk
369 oas-a1.1 Cd 24h 0.40 >More info 0.53 >More info Cd 24h root Shoot Original data GEO bulk
370 WT 90-105 min Xanthomonas 0.38 >More info 0.55 >More info WT T0 Original data GEO bulk
371 seedling 24h after HZE WT 0.28 >More info 0.65 >More info seedling day 2 unirradiated WT 24h Original data
372 GR-REV 30min 0.51 >More info 0.42 >More info Col 30min Original data GEO bulk
373 Mutant iaa17-6 0.29 >More info 0.64 >More info Col Original data GEO bulk
374 dor control 0.43 >More info 0.50 >More info WT control Original data GEO bulk
375 tunicamycin -0.33 >More info -0.60 >More info DMF Original data GEO bulk
376 Col-0 37C 0.43 >More info 0.50 >More info Col-0 22C Original data GEO bulk
377 aphid saliva treated 0.41 >More info 0.52 >More info control aphid saliva treated leaves Original data GEO bulk
378 Myzus persicae saliva 0.41 >More info 0.52 >More info Control Original data GEO bulk
379 ulp1c ulp1d +Pto 0.36 >More info 0.57 >More info ulp1c ulp1d mock Original data GEO bulk
380 ckh1 CK200 0.42 >More info 0.51 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
381 short 10-degree- 0.26 >More info 0.66 >More info control short Original data GEO bulk
382 SCR-GR Time 1H Dex 0.38 >More info 0.54 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
383 toc1-1-81hr 0.40 >More info 0.52 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
384 gpa1 -ABA GC -0.28 >More info -0.64 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
385 csn4-1 mutant 0.50 >More info 0.42 >More info WT dark Original data GEO bulk
386 long 17-degree- 0.32 >More info 0.60 >More info control long Original data GEO bulk
387 CMV-A2b mutant 0.42 >More info 0.50 >More info Mock-At Aerial tissues Original data GEO bulk
388 35S::PI ap3-3 35S::AP-GR +DEX 0.42 >More info 0.50 >More info 0hr DEX Original data GEO bulk
389 AsAKiin11 T1 0.34 >More info 0.58 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
390 Norflurazon 0.40 >More info 0.51 >More info Col-0 Original data GEO bulk
391 Heat and anoxia 0.38 >More info 0.53 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
392 leaf rlt1-1rlt2-1 -0.39 >More info -0.52 >More info leaf Col-0 leaf Original data GEO bulk
393 aerial organ callus inducing medium 96 h 0.36 >More info 0.55 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
394 Compost 0.40 >More info 0.51 >More info Perlite Compost Original data GEO bulk
395 Norflurazon 0.40 >More info 0.51 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
396 4d red light grown hmr-5 seedlings 0.40 >More info 0.51 >More info 4d red light grown WT(Col-0) seedlings Original data
397 1h +Pi -0.31 >More info -0.60 >More info 1h -Pi root Original data GEO bulk
398 Whole root - low pH 6H 0.29 >More info 0.62 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
399 AtMYB30-as 90-105 min Xanthomonas 0.41 >More info 0.50 >More info WT 90-105 min Xanthomonas Original data GEO bulk
400 Col-0 low oxygen 0.38 >More info 0.52 >More info Col-0 Original data GEO bulk
401 leaf blade in D 0.39 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
402 D2O 0.40 >More info 0.50 >More info H2O seedling Original data GEO bulk
403 Cambium 5 days NAA 0.36 >More info 0.54 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
404 Differentiation 12h 0.38 >More info 0.52 >More info Differentiation 0h leaves Original data
405 9m.KCl 0.33 >More info 0.56 >More info To. KCl 14 day old Roots Original data GEO bulk
406 15m.KCl 0.34 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
407 col-5 DC3000 4h 0.34 >More info 0.55 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
408 sicy-192 gun1-101 cotyledons 0.36 >More info 0.53 >More info WT cotyledons cotyledons Original data
409 WT mitomycin C 0.50 >More info 0.38 >More info WT mock shoot apical meristem Original data
410 Mutant axr3-1 (IAA) 0.26 >More info 0.62 >More info Col (IAA) Original data GEO bulk
411 Nicotinamide-49hr 0.38 >More info 0.50 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
412 Heat shock optimum 0.23 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
413 short 8-degree- 0.30 >More info 0.58 >More info control short Original data GEO bulk
414 DC3000 7h 0.30 >More info 0.58 >More info Mock 7h DC3000 Original data GEO bulk
415 phyB mutant 22C 10hrs -0.31 >More info -0.56 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
416 ahg2-1sid2-2 0.26 >More info 0.61 >More info WT (Col) control Original data GEO bulk
417 FLIGHT TAGESB plate6 ROOTS 0.17 >More info 0.70 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
418 Light 0.29 >More info 0.58 >More info Control Original data GEO bulk
419 rosette leaves fdh 0.33 >More info 0.53 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
420 46T-CK 0.19 >More info 0.67 >More info WT-CK none Original data
421 seedling 1.5h after Gamma WT 0.32 >More info 0.54 >More info seedling day 1 unirradiated WT 1.5h Original data
422 Mutant sav3-2 (SH) 0.21 >More info 0.65 >More info Col-0 (SH) Original data GEO bulk
423 Mutant iaa17-6 (IAA) 0.28 >More info 0.58 >More info Col (IAA) Original data GEO bulk
424 sid2-PsmES4326-24hpi -0.35 >More info -0.51 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
425 sav3-2 shade 0.21 >More info 0.65 >More info Col-0 shade seedlings Original data GEO bulk
426 pif4pif5 mut dark -0.31 >More info -0.54 >More info WT dark Original data GEO bulk
427 siliques AtHb1 control 0.33 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
428 Tsu-1 -Fe 24h 0.34 >More info 0.51 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
429 HARAP hypoxic 0.34 >More info 0.51 >More info hypoxic hypoxia Original data GEO bulk
430 Tsu -Fe 24h Roots 0.34 >More info 0.51 >More info Tsu +Fe 24h Roots Original data GEO bulk
431 pmr4-1 powdery mildew 0.32 >More info 0.53 >More info WT powdery mildew uninoculated Original data GEO bulk
432 short 12-degree- 0.25 >More info 0.60 >More info control short Original data GEO bulk
433 MYB46-GR DEX 0.15 >More info 0.70 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
434 35S::LFY 0.35 >More info 0.50 >More info Landsberg erecta seedlings Original data GEO bulk
435 Laer pretreat GA Flg22 0h 0.50 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
436 Col whole leaf 1dpi -0.34 >More info -0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
437 gpa1 -ABA LF 0.30 >More info 0.54 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
438 Protoplast Induced 0.12 >More info 0.72 >More info Uninduced Original data GEO bulk
439 12h-DC3000 avrRpm1 0.19 >More info 0.64 >More info 12h-DC3000 leaves Original data GEO bulk
440 amiR-tor induced 3d 0.33 >More info 0.50 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
441 aba1 hypocotyl 0.27 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
442 agb1 gpa1 +ABA LF -0.24 >More info -0.59 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
443 pho1 0.52 >More info 0.30 >More info Col2WT Original data GEO bulk
444 35SAvr 0.17 >More info 0.65 >More info Ecotype Col Original data GEO bulk
445 seedling 6h after HZE WT 0.31 >More info 0.51 >More info seedling day 1 unirradiated WT 6h Original data
446 IAA7mII over-expressor IAA Treated 0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
447 WT 24h cold 0.30 >More info 0.51 >More info WT warm 24h cold entire aerial part Original data GEO bulk
448 Whole root - low pH 3H 0.22 >More info 0.59 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
449 toc1-1-89hr 0.50 >More info 0.30 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
450 Col in Pi deficiency medium 0.19 >More info 0.61 >More info Col in control medium root Original data GEO bulk
451 gpa1-4/agb1-2 ozone 2d -0.29 >More info -0.51 >More info Col ozone 2d ozone Original data GEO bulk
452 abi1 hypocotyl 0.19 >More info 0.61 >More info Ler hypocotyl hypocotyl Original data GEO bulk
453 46T-Dry 0.29 >More info 0.51 >More info WT-Dry dehydration treatment 1h Original data
454 Col-0 2HS 0.30 >More info 0.50 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
455 sicy-192 cotyledons 0.28 >More info 0.52 >More info WT cotyledons cotyledons Original data
456 gis5 seedlings 0.25 >More info 0.55 >More info WT seedlings Whole seedlings (leaves + roots) Original data
457 PstDC3000 48h 0.29 >More info 0.50 >More info WT untreated 48hr leaf Original data GEO bulk
458 Stem tissue 2 days NAA 0.17 >More info 0.62 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
459 HARAP aerobic -0.20 >More info -0.59 >More info WT aerobic aerobic Original data GEO bulk
460 sfr3 cold 0.26 >More info 0.53 >More info WT cold All aerial tissue Original data GEO bulk
461 Mutant iaa5_6_19(IAA) 0.26 >More info 0.52 >More info Col (IAA) Original data GEO bulk
462 Mutant arf2 (etiol) 0.24 >More info 0.54 >More info Col (etiol) Original data GEO bulk
463 arf2 mock 0.24 >More info 0.54 >More info Col mock Original data GEO bulk
464 bak1-3 +Pep2 2h 0.20 >More info 0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
465 4C 1h 0.19 >More info 0.59 >More info 4C 0h Original data GEO bulk
466 35S:ATR1 like miR -0.24 >More info -0.54 >More info WT for miR Original data GEO bulk
467 AtLysM RLK1 mutant water 0.27 >More info 0.51 >More info WT water Original data GEO bulk
468 xyl-grown cell culture- 1h 1mM Fru -0.06 >More info -0.72 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
469 Col-0 norflurazon 0.26 >More info 0.51 >More info Col-0 control Original data GEO bulk
470 sfr6 drought -0.21 >More info -0.56 >More info WT drought All aerial tissue Original data GEO bulk
471 21h-DC3000 hrpA -0.25 >More info -0.51 >More info 21h-DC3000 leaves Original data GEO bulk
472 C24 UV1 -0.53 >More info -0.22 >More info C24 mock UV seedling Original data
473 nas4x leaves - Fe -0.24 >More info -0.51 >More info WT leaves - Fe Leaves Original data GEO bulk
474 SA 3h 0.08 >More info 0.67 >More info EtOH 3h 3hr Original data GEO bulk
475 sng1 0.18 >More info 0.56 >More info WT aerial region Original data GEO bulk
476 Rose Bengal 0.5 uM 0.17 >More info 0.57 >More info Control RB and PER Rose Bengal Original data
477 ddm1-2 -0.00 >More info 0.74 >More info Col-0 plant inflorescence Original data
478 seedling 24h after HZE atm-1 0.17 >More info 0.57 >More info seedling day 2 unirradiated atm-1 24h Original data
479 oligomycin 1 h 0.17 >More info 0.56 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
480 amiRAP aerobic -0.16 >More info -0.57 >More info WT aerobic aerobic Original data GEO bulk
481 WT 3H Cold 0.04 >More info 0.69 >More info WT control Original data GEO bulk
482 SA 24h 0.11 >More info 0.61 >More info EtOH 24h 24hr Original data GEO bulk
483 seedling 6h after Gamma WT 0.22 >More info 0.50 >More info seedling day 1 unirradiated WT 6h Original data
484 12m.KCl 0.16 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
485 Starch sheath 5 days MS incubation 0.16 >More info 0.55 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
486 seedling 12h after HZE WT 0.17 >More info 0.54 >More info seedling day 1 unirradiated WT 12h Original data
487 sav1-1 light 0.21 >More info 0.50 >More info Col-0 light seedlings Original data GEO bulk
488 IXB induced 0.19 >More info 0.51 >More info Methanol IXB Suspension cells Original data GEO bulk
489 short 14-degree- 0.16 >More info 0.53 >More info control short Original data GEO bulk
490 t-zeatin 0.5 h -0.11 >More info -0.58 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
491 E.orontii Infection 3 day 0.12 >More info 0.56 >More info Uninfection 3 day Original data Elicitor treatments
492 pXVE:HA-EDM2-a untreated -0.14 >More info -0.54 >More info Col-0 untreated seedlings Original data GEO bulk
493 TA induced 0.15 >More info 0.53 >More info Methanol TA Suspension cells Original data GEO bulk
494 light -0.50 >More info -0.18 >More info dark light seedling Original data GEO bulk
495 sid2-2 safener -0.18 >More info -0.50 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
496 Brassinolide 0.5 h (det2) 0.10 >More info 0.55 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
497 flu dark 8hours/30 minute light 0.00 >More info 0.65 >More info col dark 8hours/30 minute light Original data GEO bulk
498 Ba1 UV 0.10 >More info 0.54 >More info Ba1 mock UV seedling Original data
499 SA Treated 0.55 >More info 0.08 >More info Water Original data GEO bulk
500 vte2 leaves 120h LT 0.58 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
501 root longitudinal zone-2 pH 4.6 0.10 >More info 0.52 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
502 rgs1+no sugars -0.06 >More info -0.55 >More info WT+no sugars rosette leaves Original data GEO bulk
503 2xX6x interploidy cross 0.04 >More info 0.56 >More info 2xX2x cross Original data GEO bulk
504 wnk8-1 untreated -0.10 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
505 pvip1 pvip2 seedling 0.61 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
506 FarRed Light 45min -0.02 >More info -0.57 >More info White Light 45min Original data Light treatments
507 HairpinZ 4 h (leaf) 0.61 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
508 agb1 -ABA LF 0.07 >More info 0.50 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
509 Red/FR Light45min -0.11 >More info 0.67 >More info FarRed Light 45min Original data Light treatments
510 Laer pretreat JA Flg22 0h -0.01 >More info -0.55 >More info Laer pretreat water control leaf discs Original data GEO bulk
511 ddm1-2 rdr6-15 0.02 >More info 0.53 >More info Col-0 plant inflorescence Original data
512 AtHDA6(rts1-1) rts1-5 -0.01 >More info -0.53 >More info null-mutant whole plant Original data GEO bulk
513 atm3 -0.01 >More info -0.51 >More info Col0 whole plant Original data GEO bulk
514 bri1-116 -0.21 >More info 0.73 >More info Col seedling Original data GEO bulk
515 WT drought 0.01 >More info 0.50 >More info WT control All aerial tissue Original data GEO bulk
516 Shoot apex inflorescence (after bolting) -0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
517 root - 08% oxygen - 30min -0.06 >More info 0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
518 seed germinating in countinuous light 24h SL -0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
519 Col PSTDC3000 24h 0.61 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
520 opr3 OPDA 0.5 h -0.07 >More info 0.53 >More info opr3 0 h Original data GEO bulk
521 root - 04% oxygen - 2h -0.11 >More info 0.54 >More info root - 21% oxygen - 2h Original data GEO bulk
522 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
523 P. infestans 6 h (leaf) 0.58 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
524 tga1 tga4 2h KNO3 0.16 >More info -0.58 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
525 Light 3day hml -0.37 >More info 0.52 >More info 0h hml Original data