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List of experiments correlated with "upf3"

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Score	Experiment	Correlation from upf3	Correlation to upf3	Control Experiment	Genotype	Treatment	Tissue	Link to original data	Experimental Category	Data set Details
1	upf3	1.00 >More info	1.00 >More info	WT			whole plant	Original data	GEO bulk
2	upf1	0.91 >More info	0.90 >More info	WT			whole plant	Original data	GEO bulk
3	smg5-2	0.88 >More info	0.84 >More info	WT			whole plant	Original data	GEO bulk
4	CMV-WT	0.80 >More info	0.86 >More info	Mock-At			Aerial tissues	Original data	GEO bulk
5	Col ozone 2d	0.77 >More info	0.86 >More info	Col clean-air 2d		ozone		Original data	GEO bulk
6	SLWF infested	0.80 >More info	0.79 >More info	SLWF uninfested			rosette tissue	Original data	GEO bulk
7	del1-1 mutant 5d uninfected	0.71 >More info	0.88 >More info	Col-0 5d uininfected			mature fully expanded leaves	Original data	GEO bulk
8	RPL18 TuMV inoculated total RNA	0.78 >More info	0.79 >More info	mock inoculated total RNA			PO	Original data	GEO bulk
9	CLO 4mM	0.73 >More info	0.84 >More info	untreated		4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
10	RPL18 TuMV inoculated polysomal RNA	0.75 >More info	0.77 >More info	mock inoculated polysomal RNA			PO	Original data	GEO bulk
11	smg7b-1	0.72 >More info	0.80 >More info	WT			whole plant	Original data	GEO bulk
12	eds16 whole leaf 5dpi	-0.69 >More info	-0.81 >More info	Col whole leaf 5dpi			whole leaf	Original data	GEO bulk
13	cpr5	0.74 >More info	0.76 >More info	WT(COL)				Original data	GEO bulk
14	gh3.5-1D 48 hpi	0.71 >More info	0.77 >More info	Col-0 uninoculated				Original data	GEO bulk
15	35S:RPS4 eds1-2 24h	-0.71 >More info	-0.76 >More info	35S:RPS4 24h			leaves	Original data
16	Elevated CO2 AMPLE N NIGHT	0.67 >More info	0.79 >More info	Ambient CO2 AMPLE N NIGHT			Youngest Most Fully Expanded Leaf	Original data
17	bak1-3 +Pep2 10h	0.74 >More info	0.72 >More info	WT +Pep2 10h		Pep2		Original data	GEO bulk
18	sid2-1 cold	-0.68 >More info	-0.78 >More info	WT cold		3 week cold	entire aerial part	Original data	GEO bulk
19	OH1	0.68 >More info	0.78 >More info	Col-0			leaves	Original data	GEO bulk
20	Col whole leaf 5dpi	0.68 >More info	0.78 >More info	Col whole leaf 0h UI			whole leaf	Original data	GEO bulk
21	WT-SA	0.68 >More info	0.77 >More info	WT-mock spray		1 mM SA for 6 hrs (spray)	mature leaf	Original data	GEO bulk
22	cpr5scv1	0.74 >More info	0.71 >More info	WT(COL)				Original data	GEO bulk
23	IMI 4mM	0.69 >More info	0.76 >More info	untreated		4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
24	S58-2	0.67 >More info	0.77 >More info	wt				Original data	GEO bulk
25	cpr5	0.72 >More info	0.72 >More info	WT			seedling	Original data	GEO bulk
26	P.syringae AvrRpt2 4 h (leaf)	0.67 >More info	0.77 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
27	eds16 whole leaf 6hpi	-0.65 >More info	-0.78 >More info	Col whole leaf 6hpi			whole leaf	Original data	GEO bulk
28	pvip1 pvip2	0.70 >More info	0.73 >More info	Col-0			whole rosettes	Original data	GEO bulk
29	sni1	0.65 >More info	0.77 >More info	WT				Original data	GEO bulk
30	BLM+INA	0.74 >More info	0.68 >More info	CK		BLM and INA	seedling	Original data
31	CMP 24hr	0.73 >More info	0.69 >More info	Acetone 24hr			root	Original data	GEO bulk
32	Sulfometuron EC50	0.74 >More info	0.68 >More info	Carrier				Original data	GEO bulk
33	SA 4mM	0.74 >More info	0.68 >More info	untreated		4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
34	A6 mutant	0.64 >More info	0.77 >More info	WT rosette leaves			Rosette leaves	Original data	GEO bulk
35	efr-1 +elf18 10h	-0.73 >More info	-0.68 >More info	WT +elf18 10h		elf18		Original data	GEO bulk
36	S15-118	0.61 >More info	0.80 >More info	wt				Original data	GEO bulk
37	aox1a:rpoTmp untreated	0.71 >More info	0.70 >More info	WT(Col0) untreated (control aox1a:rpoTmp)			leaf	Original data
38	Col-0 INA 48h	0.63 >More info	0.77 >More info	Col-0 MOCK 48h				Original data	GEO bulk
39	rpoTmp(line) MLD stressed	0.71 >More info	0.69 >More info	WT(Col0) MLD stressed (control rpoTmp)			leaf	Original data
40	Col whole leaf 7dpi	0.64 >More info	0.76 >More info	Col whole leaf 7d UI			whole leaf	Original data	GEO bulk
41	bZIP1ko mutant N+Light-	0.63 >More info	0.77 >More info	WT-sib N+Light-			whole plant	Original data	GEO bulk
42	Elevated CO2 fully expanded leaf	0.74 >More info	0.65 >More info	Ambient CO2 fully expanded leaf			fully expanded leaf	Original data
43	Col BTH	0.72 >More info	0.67 >More info	Col			rosettes	Original data	GEO bulk
44	35S:RPS4 eds1-2 8h	-0.66 >More info	-0.73 >More info	35S:RPS4 8h			leaves	Original data
45	aba3-1	0.62 >More info	0.76 >More info	wt				Original data	GEO bulk
46	Col-0 48 hpi	0.65 >More info	0.73 >More info	Col-0 uninoculated				Original data	GEO bulk
47	Mature callus	0.68 >More info	0.70 >More info	Young callus			hypocotyls	Original data	GEO bulk
48	A. thaliana-A. lyrata hybrid	-0.67 >More info	-0.71 >More info	A. thaliana			mature leaves before flowering	Original data	GEO bulk
49	vtc1 (II)	0.69 >More info	0.69 >More info	Col (II)			rosette	Original data	GEO bulk
50	des1 water	0.71 >More info	0.67 >More info	WT water		water	leaf	Original data	GEO bulk
51	DFPM	0.68 >More info	0.70 >More info	control				Original data	GEO bulk
52	Shoot -K	0.62 >More info	0.76 >More info	Control-shoot				Original data	GEO bulk
53	DC3000 24h	0.66 >More info	0.72 >More info	Mock 24h		DC3000		Original data	GEO bulk
54	K starvation (shoot)	0.62 >More info	0.76 >More info	Ws (shoot)				Original data	GEO bulk
55	camta1/3 warm	0.61 >More info	0.76 >More info	WT warm			entire aerial part	Original data	GEO bulk
56	lht1 PstDC3000 48h	0.66 >More info	0.71 >More info	PstDC3000 48h		48hr	leaf	Original data	GEO bulk
57	OE WRKY63.3 high light	0.64 >More info	0.73 >More info	OE WRKY40.4 high light		high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
58	HopZ1a treated ulp1c ulp1d	0.64 >More info	0.72 >More info	col				Original data	GEO bulk
59	Elevated CO2 expanding leaf	0.69 >More info	0.67 >More info	Ambient CO2 expanding leaf			expanding leaf	Original data
60	WT AntimycinA 3h	0.71 >More info	0.65 >More info	WT water 3h		3h_AntimycinA		Original data	GEO bulk
61	edr1 18 h powdery mildew	0.66 >More info	0.70 >More info	Col-0 18 h powdery mildew				Original data	GEO bulk
62	Shoot -Cs	0.56 >More info	0.79 >More info	Control-shoot				Original data	GEO bulk
63	LTN008-2 aza-dc	0.73 >More info	0.62 >More info	LTN012-2 Mock				Original data
64	lht1 untreated	0.60 >More info	0.75 >More info	WT untreated		untreated	leaf	Original data	GEO bulk
65	WT powdery mildew	0.62 >More info	0.73 >More info	WT control		inoculation with the powdery mildew pathogen		Original data	GEO bulk
66	apk1 apk2	0.67 >More info	0.67 >More info	Col0-control			whole rosette	Original data	GEO bulk
67	ein5-1 ski2-3	0.75 >More info	0.59 >More info	Col-0			aerial tissue	Original data
68	Mutant siz1-3	0.62 >More info	0.72 >More info	Col-0				Original data	GEO bulk
69	Cor 24h	0.62 >More info	0.72 >More info	Mock 24h		Cor		Original data	GEO bulk
70	siz1-3 control	0.62 >More info	0.72 >More info	Col-0 control				Original data	GEO bulk
71	csn5 (csn5a-2 csn5b) light	0.69 >More info	0.65 >More info	WT light				Original data	GEO bulk
72	ice1 control	0.57 >More info	0.76 >More info	WT control				Original data	GEO bulk
73	cpr5npr1	0.68 >More info	0.65 >More info	WT(COL)				Original data	GEO bulk
74	Elevated CO2 AMPLE N DAY	0.61 >More info	0.72 >More info	Ambient CO2 AMPLE N DAY			Youngest Most Fully Expanded Leaf	Original data
75	CAX1/CAX3 mutant	0.62 >More info	0.71 >More info	Col			whole plant	Original data	GEO bulk
76	camta1/2/3 warm	0.68 >More info	0.65 >More info	WT warm			entire aerial part	Original data	GEO bulk
77	seedlings-week-old RECA1-overexpressing transgenic	0.62 >More info	0.71 >More info	seedlings-week-old Col-0			seedlings	Original data
78	PAHs stress	0.62 >More info	0.71 >More info	exp control		phenanthrene	whole plants	Original data	GEO bulk
79	HopZ1a treated	0.62 >More info	0.71 >More info	col				Original data	GEO bulk
80	eds16 whole leaf 0h UI	-0.52 >More info	-0.80 >More info	Col whole leaf 0h UI			whole leaf	Original data	GEO bulk
81	camta3-2	0.60 >More info	0.72 >More info	WT				Original data	GEO bulk
82	sid2	-0.60 >More info	-0.72 >More info	Col-0-untreated-control		untreated	leaf tissue	Original data	GEO bulk
83	ceh1 mutant	0.60 >More info	0.72 >More info	Parent line				Original data
84	Col-0 under 4 days salt	0.68 >More info	0.63 >More info	Col-0 under control		4 days salt treatment	rosette	Original data
85	pmr5 pmr6	0.59 >More info	0.72 >More info	Col-0				Original data	GEO bulk
86	ein2-1 9 hpi A. brassicicola	0.64 >More info	0.67 >More info	Col-0 9 hpi mock			3rd-5th true leaves	Original data
87	cat2-hCO2	-0.68 >More info	-0.63 >More info	Col0-hCO2		grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
88	Myzus persicae saliva	0.60 >More info	0.71 >More info	Control				Original data	GEO bulk
89	cpr5npr1svi1	0.62 >More info	0.69 >More info	WT(COL)				Original data	GEO bulk
90	aphid saliva treated	0.60 >More info	0.71 >More info	control		aphid saliva treated	leaves	Original data	GEO bulk
91	Cor 10h	0.61 >More info	0.70 >More info	Mock 10h		Cor		Original data	GEO bulk
92	Osmotic Stress 24 h (shoot)	0.67 >More info	0.63 >More info	Stress mock 24 h (shoot)				Original data	Stress treatments
93	CMP 4hr	0.67 >More info	0.63 >More info	Acetone 4hr			root	Original data	GEO bulk
94	anac017-2 AntimycinA 3h	-0.67 >More info	-0.63 >More info	WT AntimycinA 3h		3h_AntimycinA		Original data	GEO bulk
95	WT-NOCO2 INFECTED	0.64 >More info	0.66 >More info	WT-MOCK				Original data	GEO bulk
96	Mutant gh3.5-1D (AvrRpt2)	0.63 >More info	0.67 >More info	Col-0 (AvrRpt2)				Original data	GEO bulk
97	UV Stress 24 h (shoot)	0.57 >More info	0.73 >More info	Stress mock 24 h (shoot)				Original data	Stress treatments
98	UV	0.69 >More info	0.61 >More info	WT			aerial region	Original data	GEO bulk
99	Col whole leaf amplified 5 dpi	0.58 >More info	0.72 >More info	Col whole leaf amplified 5d UI			whole leaf	Original data	GEO bulk
100	GST 4 h (leaf)	0.58 >More info	0.72 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
101	Mutant siz1-3 (Drought)	0.67 >More info	0.62 >More info	Col-0 (Drought)				Original data	GEO bulk
102	Fenclorim 4hr	0.64 >More info	0.65 >More info	Acetone 4hr			root	Original data	GEO bulk
103	siz1-3 drought	0.67 >More info	0.62 >More info	Col-0 drought				Original data	GEO bulk
104	Col0-PsmES4326-24hpi	0.68 >More info	0.61 >More info	Col0-mock-24hpi			leaf	Original data	GEO bulk
105	8h-DC3000 avrRpm1	0.64 >More info	0.65 >More info	8h-DC3000			leaves	Original data	GEO bulk
106	ataf1-1 mutant Col-0 Bgh inoculated	0.62 >More info	0.67 >More info	ataf1-1 mutant Col-0 Un-inoculated				Original data	GEO bulk
107	toc1-1-65hr	0.61 >More info	0.67 >More info	WT-untreated-65hr		none	seedlings aerial tissue	Original data	GEO bulk
108	cs26 short-day	-0.56 >More info	-0.72 >More info	Leaves-WT-SD			leaf	Original data	GEO bulk
109	Imidazolinone EC50	0.70 >More info	0.58 >More info	Carrier (Imidazolinone)				Original data	GEO bulk
110	downy mildew cotyledons late stage	0.57 >More info	0.70 >More info	mock inoculated			Cotyledons	Original data	GEO bulk
111	bio4-1 mutant leaves	0.54 >More info	0.73 >More info	WT leaves			leaves	Original data	GEO bulk
112	WT in -N	0.63 >More info	0.64 >More info	WT in FN		nitrogen depletion	whole seedling	Original data	GEO bulk
113	Col-0 SA	0.57 >More info	0.70 >More info	Col-0				Original data	GEO bulk
114	cop1 Seedling BL	0.63 >More info	0.64 >More info	WT Seedling BL				Original data	GEO bulk
115	toc1-1-57hr	0.60 >More info	0.67 >More info	WT-untreated-57hr		none	seedlings aerial tissue	Original data	GEO bulk
116	pmr4-1 powdery mildew	0.58 >More info	0.69 >More info	WT powdery mildew		uninoculated		Original data	GEO bulk
117	Col-Luc WT 3h antimycin A	0.66 >More info	0.61 >More info	Col-Luc WT mock		50 µM antimycin A for 3 hours	whole green tissue	Original data	GEO bulk
118	csn3-1 light	0.67 >More info	0.59 >More info	WT light				Original data	GEO bulk
119	ice1 6H Cold	0.55 >More info	0.71 >More info	WT 6H Cold				Original data	GEO bulk
120	GST NPP1 4 h (leaf)	0.63 >More info	0.63 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
121	pepr1-1 Pepr2-3 +Pep2 2h	-0.64 >More info	-0.62 >More info	WT +Pep2 2h		Pep2		Original data	GEO bulk
122	camta2/3 warm	0.60 >More info	0.65 >More info	WT warm			entire aerial part	Original data	GEO bulk
123	bio4-1 mutant watered00µM biotin leaves	-0.55 >More info	-0.70 >More info	bio4-1 mutant leaves			leaves	Original data	GEO bulk
124	aox1a(line) MLD stressed	0.61 >More info	0.64 >More info	WT(Col0) MLD stressed (control aox1a)			leaf	Original data
125	camta1/2/3 24h cold	0.61 >More info	0.63 >More info	WT 24h cold		24h cold	entire aerial part	Original data	GEO bulk
126	atgsnor1-1-avrB-6h	0.53 >More info	0.71 >More info	Col-0-avrB-6h		avrB	leaf tissue	Original data	GEO bulk
127	mkk1/mkk2 control rep	0.55 >More info	0.69 >More info	Col-0 Time 0 rep				Original data	GEO bulk
128	dor drought	0.48 >More info	0.76 >More info	WT drought				Original data	GEO bulk
129	flu	0.60 >More info	0.63 >More info	WT Col				Original data	GEO bulk
130	miR 0h	0.67 >More info	0.56 >More info	Col 0h			Leaf	Original data	GEO bulk
131	hrpA 7h	0.61 >More info	0.62 >More info	Mock 7h		hrpA		Original data	GEO bulk
132	atmyc2 cop1 Seedling BL	0.54 >More info	0.69 >More info	WT Seedling BL				Original data	GEO bulk
133	npr1-1 SA	-0.63 >More info	-0.59 >More info	Col-0 SA			complete seedling	Original data
134	coi1-2	0.57 >More info	0.65 >More info	Col-0 mock			Whole seedling	Original data	GEO bulk
135	toc1-1-49hr	0.63 >More info	0.59 >More info	WT-untreated-49hr		none	seedlings aerial tissue	Original data	GEO bulk
136	edr1 36 h powdery mildew	0.64 >More info	0.58 >More info	Col-0 36 h powdery mildew				Original data	GEO bulk
137	20d after anthesis	0.64 >More info	0.57 >More info	10d after anthesis			senescing pod tissues of 20 days after anthesis	Original data	GEO bulk
138	Pst-DC3000(avrRpm1)-4hpi	0.62 >More info	0.59 >More info	Pst-DC3000-4hpi				Original data	GEO bulk
139	eds16 whole leaf 3dpi	-0.57 >More info	-0.64 >More info	Col whole leaf 3dpi			whole leaf	Original data	GEO bulk
140	Col-0 INA 6d	0.58 >More info	0.63 >More info	Col-0 MOCK 6d				Original data	GEO bulk
141	TNT-seedlings	0.51 >More info	0.70 >More info	DMF-control-seedlings		TNT-treated-seedlings	whole plant	Original data	GEO bulk
142	penta Alternaria 3dpi	0.66 >More info	0.55 >More info	Laer Alternaria 3dpi			leaf discs	Original data	GEO bulk
143	eds16 whole leaf 7dpi	-0.51 >More info	-0.70 >More info	Col whole leaf 7dpi			whole leaf	Original data	GEO bulk
144	flu over-tAPX	0.58 >More info	0.63 >More info	WT Col				Original data	GEO bulk
145	DC3000 2 h (leaf)	0.55 >More info	0.65 >More info	Mock 2 h (leaf)				Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
146	WT H2O2 3h	0.64 >More info	0.56 >More info	WT water 3h		3h_H2O2		Original data	GEO bulk
147	ABA DFPM	0.66 >More info	0.54 >More info	control				Original data	GEO bulk
148	gh3.5D uninoculated	-0.54 >More info	-0.66 >More info	Col-0 48 hpi				Original data	GEO bulk
149	Lipopolysaccaride4 h (leaf)	0.56 >More info	0.64 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
150	BLM	0.63 >More info	0.57 >More info	CK		BLM	seedling	Original data
151	Pto inoculated	0.59 >More info	0.61 >More info	col				Original data	GEO bulk
152	aphid infested	0.62 >More info	0.58 >More info	control		aphid infested	Leaves	Original data	GEO bulk
153	Triazolopyrimidine EC50	0.61 >More info	0.59 >More info	Carrier (Triazolopyrimidine)				Original data	GEO bulk
154	aphid infested	0.62 >More info	0.58 >More info	CTR				Original data	GEO bulk
155	B.cinerea 18 h infection	0.59 >More info	0.61 >More info	Mock 18 h				Original data	Botrytis cinerea infection
156	Botrytis cinerea 18h	0.59 >More info	0.61 >More info	control 18h				Original data	GEO bulk
157	Primisulfuron EC50	0.62 >More info	0.57 >More info	Carrier (primisulfuron)				Original data	GEO bulk
158	sid2-1 warm	-0.59 >More info	-0.60 >More info	WT warm			entire aerial part	Original data	GEO bulk
159	Col whole leaf 5 dpi	0.57 >More info	0.62 >More info	Col whole leaf 5d UI			whole leaf	Original data	GEO bulk
160	21h-DC3000 avrRpm1	-0.64 >More info	-0.55 >More info	21h-DC3000			leaves	Original data	GEO bulk
161	low water potential	0.64 >More info	0.55 >More info	control		Col-0 -1.2 MPa	whole seedlings	Original data	GEO bulk
162	Light 3day wt	-0.46 >More info	-0.73 >More info	0h wt				Original data
163	AFB1 0h	0.68 >More info	0.50 >More info	Col 0h			Leaf	Original data	GEO bulk
164	S14-150	0.53 >More info	0.65 >More info	wt				Original data	GEO bulk
165	overexpresser LBD38 in -N	-0.65 >More info	-0.53 >More info	WT in -N		nitrogen depletion	whole seedling	Original data	GEO bulk
166	low CO2 + light	0.62 >More info	0.56 >More info	normal CO2 + light				Original data	GEO bulk
167	Octopus overexpressor 35SDYG25	0.63 >More info	0.55 >More info	WS				Original data	GEO bulk
168	Phaseolicola 2 h (leaf)	0.58 >More info	0.60 >More info	Mock 2 h (leaf)				Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
169	shoots bhlh100/101 0uM Fe	0.71 >More info	0.47 >More info	shoots WT 0uM Fe		0uM Fe	shoots	Original data	GEO bulk
170	35S::ERF104 Flg22 4h	0.59 >More info	0.59 >More info	35S::ERF104 H2O 4h				Original data	GEO bulk
171	mkk1/mkk2 24h BTH rep	0.57 >More info	0.61 >More info	Col-0 24h BTH rep				Original data	GEO bulk
172	IRP1-OE-Fe--shoot	0.57 >More info	0.60 >More info	COL-0-Fe--shoot			shoot	Original data
173	pnp1-1 1wk +P	0.58 >More info	0.59 >More info	WT 1wk +P		Full nutrient medium (+P)	seedlings without roots	Original data	GEO bulk
174	Flagellin 4 h (leaf)	0.57 >More info	0.60 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
175	A. lyrata	-0.61 >More info	-0.56 >More info	A. thaliana			mature leaves before flowering	Original data	GEO bulk
176	Leaf wounded	0.50 >More info	0.67 >More info	Leaf control			vegetative leaf	Original data	GEO bulk
177	Tsu -Fe 48h Shoots	0.56 >More info	0.60 >More info	Tsu +Fe 24h Shoots				Original data	GEO bulk
178	Leafminer locally damaged thaliana seedlings	0.59 >More info	0.57 >More info	Undamaged thaliana seedlings		locally damaged by leafminer	leaves	Original data	GEO bulk
179	Leafminer damaged seedlings	0.59 >More info	0.56 >More info	Healthy seedlings			leaves	Original data	GEO bulk
180	E.coli TUV86 2 fliC 7h	0.58 >More info	0.57 >More info	Mock 7h		E.coli TUV86 2 fliC		Original data	GEO bulk
181	WT 2-4h Xanthomonas	0.57 >More info	0.58 >More info	WT T0				Original data	GEO bulk
182	rosette leaves fdh	0.50 >More info	0.65 >More info	rosette leaves WT			Young rosette leaves 2mm to 1cm	Original data	GEO bulk
183	pepr1-1 Pepr2-3 +Pep2 10h	-0.61 >More info	-0.54 >More info	WT +Pep2 10h		Pep2		Original data	GEO bulk
184	cat2-long-day 2d	-0.64 >More info	-0.51 >More info	Col0-LD2		transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
185	Cor hrpS 10h	0.62 >More info	0.53 >More info	Mock 10h		Cor hrpS		Original data	GEO bulk
186	nia1nia2	0.62 >More info	0.53 >More info	Col-0			whole seedlings	Original data	GEO bulk
187	col-5 DC3000 12h	0.54 >More info	0.61 >More info	col-5 MgCl2 12h			Whole leaf	Original data	GEO bulk
188	Col-0-avrB-6h	0.54 >More info	0.61 >More info	Col-0-untreated-control		avrB	leaf tissue	Original data	GEO bulk
189	pmr5	0.48 >More info	0.67 >More info	Col-0				Original data	GEO bulk
190	irradiated leaf (WT 1d)	0.60 >More info	0.54 >More info	control leaf (WT 1d)			rosette leaf only	Original data	GEO bulk
191	Botrytis cinerea 48h	0.54 >More info	0.60 >More info	control 48h				Original data	GEO bulk
192	atmospheric CO2 low Mg shoot	0.66 >More info	0.48 >More info	atmospheric CO2 normal Mg shoot			Shoot	Original data
193	Col laser microdissected 5 dpi	0.45 >More info	0.69 >More info	Col laser microdissected 5d UI			LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
194	atgsnor1-1	-0.67 >More info	-0.46 >More info	Col-0-untreated-control		untreated	leaf tissue	Original data	GEO bulk
195	AvrRpm1 2 h (leaf)	0.54 >More info	0.59 >More info	Mock 2 h (leaf)				Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
196	SA	0.55 >More info	0.58 >More info	WT mock			Whole seedling	Original data	GEO bulk
197	cdpk6-yfp	0.56 >More info	0.57 >More info	Kan			seedlings	Original data	GEO bulk
198	Col-0 9 hpi A. brassicicola	0.53 >More info	0.60 >More info	Col-0 9 hpi mock			3rd-5th true leaves	Original data
199	col-5 hrpA 12h	0.51 >More info	0.62 >More info	col-5 MgCl2 12h			Whole leaf	Original data	GEO bulk
200	G3P	0.51 >More info	0.62 >More info	Mock			distal leaves	Original data	GEO bulk
201	Seedling KUA1-IOX est	0.55 >More info	0.57 >More info	Seedling KUA1-IOX mock				Original data
202	irradiated leaf (cmt 1d)	0.63 >More info	0.49 >More info	control leaf (cmt 1d)			rosette leaf only	Original data	GEO bulk
203	cov1 cov2 stem Base	0.62 >More info	0.50 >More info	WT stem Base			stem Base	Original data	GEO bulk
204	atmospheric CO2 high Mg shoot	0.68 >More info	0.44 >More info	atmospheric CO2 normal Mg shoot			Shoot	Original data
205	hrcC	0.55 >More info	0.57 >More info	MgCl2		5x10^7 cfu/ml DC3000 hrcC mutant		Original data	GEO bulk
206	cop1 Seedling BL+ABA	0.55 >More info	0.57 >More info	WT Seedling BL+ABA				Original data	GEO bulk
207	nas4x leaves - Fe	-0.57 >More info	-0.55 >More info	WT leaves - Fe			Leaves	Original data	GEO bulk
208	PBZ	0.43 >More info	0.69 >More info	none		PBZ	Rosette	Original data	GEO bulk
209	Laer treat paclobutrazol (PAC)	0.56 >More info	0.55 >More info	Laer Control			leaf discs	Original data	GEO bulk
210	ASL9-ox	-0.55 >More info	-0.56 >More info	WT			aerial parts of seedlings	Original data	GEO bulk
211	Chitosan 3h Treatment	0.55 >More info	0.56 >More info	No Chitosan Control		chitosan treatment for 3 hours under continuous light.		Original data	GEO bulk
212	seedlings +5AC	0.63 >More info	0.48 >More info	control seedlings			10-day old whole seedling	Original data	GEO bulk
213	toc1-1-69hr	0.51 >More info	0.60 >More info	WT-untreated-69hr		none	seedlings aerial tissue	Original data	GEO bulk
214	AgNO3 3 h	0.54 >More info	0.57 >More info	Mock 3 h				Original data	Effect of ethylene inhibitors on seedlings
215	Col ozone 3h	0.49 >More info	0.62 >More info	Col clean-air 3h		ozone		Original data	GEO bulk
216	irradiated leaf (cmt 5d)	0.47 >More info	0.64 >More info	control leaf (cmt 5d)			rosette leaf only	Original data	GEO bulk
217	wrky33 Bc inoculation 14h	0.60 >More info	0.50 >More info	wrky33 mock		14 hour post inoculation with spores of Botrytis cinerea 2100	leaves	Original data
218	8hr-pH4.5	0.53 >More info	0.57 >More info	8hr-pH6		8hr pH 4.5	roots	Original data	GEO bulk
219	stn7-1	-0.54 >More info	-0.56 >More info	Col-0			rosette leaves	Original data	GEO bulk
220	E.coli 0157 H7 7h	0.59 >More info	0.51 >More info	Mock 7h		E.coli 0157 H7		Original data	GEO bulk
221	vte2-1 3d vernalization	0.50 >More info	0.60 >More info	WT 3d vernalization				Original data	GEO bulk
222	msh1 recA3 heat shock	0.55 >More info	0.55 >More info	WT heat shock			above-ground parts	Original data	GEO bulk
223	Te ozone	0.57 >More info	0.53 >More info	Te ctrl		350 ppb ozone exposure for 2hr	whole rosette	Original data
224	Protoplast Induced	0.44 >More info	0.66 >More info	Uninduced				Original data	GEO bulk
225	pad4-PsmES4326-24hpi	-0.58 >More info	-0.51 >More info	Col0-PsmES4326-24hpi		PsmES4326	leaf	Original data	GEO bulk
226	npr1-3 DCA 48h	0.52 >More info	0.57 >More info	npr1-3 MOCK 48h				Original data	GEO bulk
227	A. halleri	-0.60 >More info	-0.49 >More info	A. thaliana			mature leaves before flowering	Original data	GEO bulk
228	WT Col-0 Bgh inoculated	0.50 >More info	0.59 >More info	WT Col-0 Un-inoculated				Original data	GEO bulk
229	Laer pretreat GA Flg22 1h	0.38 >More info	0.71 >More info	Laer pretreat water control			leaf discs	Original data	GEO bulk
230	brm-101	0.49 >More info	0.60 >More info	Ler				Original data	GEO bulk
231	WT flg22 2h	0.52 >More info	0.56 >More info	WT 0h			Leaf tissue	Original data	GEO bulk
232	toc1-1-89hr	0.39 >More info	0.69 >More info	WT-untreated-89hr		none	seedlings aerial tissue	Original data	GEO bulk
233	Fenclorim 24hr	0.53 >More info	0.54 >More info	Acetone 24hr			root	Original data	GEO bulk
234	pho1	0.65 >More info	0.42 >More info	Col2WT				Original data	GEO bulk
235	Cycloheximide 3 h	0.56 >More info	0.51 >More info	Mock 3 h				Original data	Effect of other inhibitors on seedlings
236	R. solani AG8	0.56 >More info	0.51 >More info	control		Rhizoctonia solani AG8	whole seedling	Original data	GEO bulk
237	abi4 vtc2 (I)	0.55 >More info	0.52 >More info	Col (I)			rosette	Original data	GEO bulk
238	AvrRpt2 Col-0 6hpi	0.58 >More info	0.49 >More info	AvrRpt2 Col-0 0hpi		Infiltration of Psm	mature leaf	Original data
239	coi1-16 ein2 sid2 ctrl	-0.57 >More info	-0.50 >More info	Col-0 ozone- (control genotype coi1-16 ein2 sid2)		control		Original data
240	msh1 albino	0.49 >More info	0.58 >More info	WT			aerial part	Original data	GEO bulk
241	oligomycin 4 h	0.55 >More info	0.51 >More info	mock 4 h		4 h_oligo	seedling culture	Original data	GEO bulk
242	Col leaves 48h LT	0.52 >More info	0.54 >More info	Col leaves 0h LT		48h	9-11th adult leaves	Original data
243	GO5; 8h switch to ambient CO2 concentrations;	0.53 >More info	0.53 >More info	WT; 8h switch to ambient CO2 concentrations;			2 whole rosettes	Original data
244	leaf chr11-1chr17-1	0.57 >More info	0.49 >More info	leaf Col-0			leaves	Original data	GEO bulk
245	Col-0 DCA 48h	0.37 >More info	0.69 >More info	Col-0 MOCK 48h				Original data	GEO bulk
246	35S::PI ap3-3 35S::AP-GR +DEX	0.45 >More info	0.61 >More info	0hr DEX				Original data	GEO bulk
247	R. solani AG2-1	0.55 >More info	0.50 >More info	control		Rhizoctonia solani AG2-1	whole seedling	Original data	GEO bulk
248	long 14-degree-	0.50 >More info	0.55 >More info	control long				Original data	GEO bulk
249	Compost	0.54 >More info	0.51 >More info	Perlite		Compost		Original data	GEO bulk
250	6h +Pi	-0.52 >More info	-0.53 >More info	6h -Pi			root	Original data	GEO bulk
251	toc1-1-85hr	0.45 >More info	0.60 >More info	WT-untreated-85hr		none	seedlings aerial tissue	Original data	GEO bulk
252	treated group	0.44 >More info	0.61 >More info	Control group				Original data
253	eds16 whole leaf 7d UI	-0.47 >More info	-0.58 >More info	Col whole leaf 7d UI			whole leaf	Original data	GEO bulk
254	OE WRKY40.4 high light	0.47 >More info	0.58 >More info	OE WRKY40.4 high light		high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
255	vtc2 (I)	0.50 >More info	0.54 >More info	Col (I)			rosette	Original data	GEO bulk
256	+1.6 mM Tween 20 1 h.	0.53 >More info	0.51 >More info	+distilled water 1 h.				Original data	GEO bulk
257	21h-DC3000 hrpA	-0.55 >More info	-0.49 >More info	21h-DC3000			leaves	Original data	GEO bulk
258	Wounding Stress3 h (shoot)	0.55 >More info	0.49 >More info	Stress mock 3 h (shoot)				Original data	Stress treatments
259	long 17-degree-	0.43 >More info	0.61 >More info	control long				Original data	GEO bulk
260	rcf1-1 cold 0h	0.48 >More info	0.56 >More info	WT cold 0h		Control	seedlings	Original data	GEO bulk
261	pmr4-1 control	0.47 >More info	0.57 >More info	WT control		uninoculated		Original data	GEO bulk
262	Elevated CO2 LIMITING N NIGHT	0.53 >More info	0.50 >More info	Elevated CO2 AMPLE N NIGHT			Youngest Most Fully Expanded Leaf	Original data
263	4C 2h(SOIL)	0.51 >More info	0.52 >More info	4C 0h(SOIL)				Original data	GEO bulk
264	9 hr Hypoxia 1 hr recovery Total RNA	0.52 >More info	0.51 >More info	9 hr Non-Stress Total RNA			seedlings	Original data	GEO bulk
265	anac017-2 H2O2 3h	-0.58 >More info	-0.45 >More info	WT H2O2 3h		3h_H2O2		Original data	GEO bulk
266	ARR22-ox (t-zeatin 3 h)	0.61 >More info	0.42 >More info	Col-0 (t-zeatin 3 h)				Original data	Cytokinin treatment of seedlings
267	mpk6-ko Flg22 4h	0.47 >More info	0.56 >More info	mpk6-ko H2O 4h				Original data	GEO bulk
268	35:SUB1A	0.64 >More info	0.38 >More info	WT			whole seedling	Original data	GEO bulk
269	Leafminer systemically damaged thaliana seedlings	0.53 >More info	0.49 >More info	Undamaged thaliana seedlings		systemically damaged by leafminer	leaves	Original data	GEO bulk
270	tor mutant glucose	0.55 >More info	0.47 >More info	WT (Col) glucose		glucose	seedlings	Original data	GEO bulk
271	rosette Dark Wounded	0.44 >More info	0.58 >More info	rosette Dark Control				Original data	GEO bulk
272	SCR-GR Time 1H Dex	0.41 >More info	0.61 >More info	SCR-GR Time 0H Dex		Dex media for 1 hour		Original data	GEO bulk
273	phyB mutant 22C 10hrs	-0.38 >More info	-0.64 >More info	L22-10hrs			whole plant excluding roots	Original data	GEO bulk
274	ckh1 CK200	0.48 >More info	0.54 >More info	WT (Ler) CK200		cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin.	tissue culture	Original data	GEO bulk
275	sfr3 cold	0.48 >More info	0.54 >More info	WT cold			All aerial tissue	Original data	GEO bulk
276	GO5; 0h switch to ambient CO2 concentrations;	-0.62 >More info	-0.39 >More info	WT; 0h switch to ambient CO2 concentrations;			2 whole rosettes	Original data
277	csn4-1 dark	0.59 >More info	0.42 >More info	WT light				Original data	GEO bulk
278	Col-0 Flg22 4h	0.49 >More info	0.52 >More info	Col-0 H2O 4h				Original data	GEO bulk
279	RRE2 Chitin	0.47 >More info	0.54 >More info	Chitin				Original data	GEO bulk
280	Stem tissue 5 days NAA	0.40 >More info	0.61 >More info	Stem tissue T0		Stem tissue with NAA treatment	Stem tissue with NAA treatment	Original data	GEO bulk
281	npr1 sni1 ssn2 SA	-0.47 >More info	-0.54 >More info	npr1 sni1 SA		salicylic acid	seedling	Original data	GEO bulk
282	WT Shoot Hypoxia	0.49 >More info	0.52 >More info	WT Shoot Normoxia (mock)		Hypoxia	Shoot	Original data	GEO bulk
283	ice1 24H Cold	0.42 >More info	0.59 >More info	WT 24H Cold				Original data	GEO bulk
284	OE WRKY63.3	0.41 >More info	0.60 >More info	OE WRKY40.4		none	leaf	Original data	GEO bulk
285	cat2-2; 8h switch to ambient CO2 concentrations;	0.63 >More info	0.37 >More info	WT; 8h switch to ambient CO2 concentrations;			2 whole rosettes	Original data
286	Time-0 chr11-1chr17-1	-0.50 >More info	-0.50 >More info	Time-0 Col-0			leaf explants	Original data
287	plant (tga2-5-6) 4h phytoprostane A1	0.53 >More info	0.47 >More info	plant (tga2-5-6) 4h control				Original data	GEO bulk
288	9 hr Hypoxia 1 hr recovery IP RNA	0.51 >More info	0.49 >More info	9 hr Non-Stress IP RNA			seedlings	Original data	GEO bulk
289	npr1-PsmES4326-24hpi	-0.44 >More info	-0.56 >More info	Col0-PsmES4326-24hpi		PsmES4326	leaf	Original data	GEO bulk
290	npr1 sni1 SA	0.42 >More info	0.58 >More info	npr1 sni1 water		salicylic acid	seedling	Original data	GEO bulk
291	Col-0 ozone- (control genotype coi1-16 ein2 sid2)	0.56 >More info	0.43 >More info	Col-0 ctrl (control genotype coi1-16 ein2 sid2)		350 ppb ozone exposure for 2hr		Original data
292	seedlings protease IV	0.54 >More info	0.45 >More info	seedlings nontreated control			whole seedling	Original data
293	abi4-102 (II)	0.50 >More info	0.49 >More info	Col (II)			rosette	Original data	GEO bulk
294	aox1a(line) untreated	-0.54 >More info	-0.45 >More info	WT(Col0) untreated (control aox1a)			leaf	Original data
295	hrpA fliC 7h	0.56 >More info	0.43 >More info	Mock 7h		hrpA fliC		Original data	GEO bulk
296	WT Shoot-Pi	0.53 >More info	0.46 >More info	WT Shoot+Pi			shoots	Original data	GEO bulk
297	cat2-2; harvested 8h continiously maintained in high CO2;	-0.70 >More info	-0.29 >More info	WT; harvested 8h continiously maintained in high CO2;			2 whole rosettes	Original data
298	coi1-16 ein2 sid2 ozone	0.57 >More info	0.42 >More info	coi1-16 ein2 sid2 ctrl		350 ppb ozone exposure for 2hr		Original data
299	Col whole leaf 3dpi	0.55 >More info	0.44 >More info	Col whole leaf 0h UI			whole leaf	Original data	GEO bulk
300	sid2-PsmES4326-24hpi	-0.39 >More info	-0.60 >More info	Col0-PsmES4326-24hpi		PsmES4326	leaf	Original data	GEO bulk
301	GA	0.44 >More info	0.55 >More info	none		GA	Rosette	Original data	GEO bulk
302	amiR-tor induced 6d	0.40 >More info	0.59 >More info	amiR-tor 6d C		6 days estradiol-treated	seedlings	Original data	GEO bulk
303	WT +elf18 2h	0.48 >More info	0.51 >More info	WT untreated		elf18		Original data	GEO bulk
304	Col-0 2HS	0.42 >More info	0.57 >More info	Col-0NS		2 h hypoxia stress (2HS)	7-day-old seedlings	Original data
305	overexpresser LBD37 in -N	-0.57 >More info	-0.41 >More info	WT in -N		nitrogen depletion	whole seedling	Original data	GEO bulk
306	WT Bc inoculation 14h	0.55 >More info	0.43 >More info	WT mock		14 hour post inoculation with spores of Botrytis cinerea 2100	leaves	Original data
307	WT +elf18 10h	0.58 >More info	0.40 >More info	WT untreated		elf18		Original data	GEO bulk
308	Col-0 ozone- (control genotype tga2 tag5 tga6)	0.58 >More info	0.40 >More info	Col-0 ctrl (control genotype tga2 tag5 tga6)		350 ppb ozone exposure for 2hr		Original data
309	Col-0 ozone	0.56 >More info	0.42 >More info	Col-0 ctrl		350 ppb ozone exposure for 2hr	whole rosette	Original data
310	4d red light grown hmr-5 seedlings	0.51 >More info	0.47 >More info	4d red light grown WT(Col-0) seedlings				Original data
311	nia1nia2noa1-2	0.51 >More info	0.47 >More info	Col-0			whole seedlings	Original data	GEO bulk
312	oas-a1.1 Cd 18h	0.36 >More info	0.62 >More info	Cd 18h root			Root	Original data	GEO bulk
313	WT leaves - Fe	0.48 >More info	0.50 >More info	WT leaves + Fe			Leaves	Original data	GEO bulk
314	rsa3-1 Na 24h	0.42 >More info	0.56 >More info	WT Na 24h		120 mM NaCl for 24 h	whole seedlings	Original data	GEO bulk
315	HSP90 Reduced RNAi-C1	0.44 >More info	0.54 >More info	HSP90 Reduced Col-0 CS60000			All aerial tissue	Original data	GEO bulk
316	WT +Pep2 2h	0.62 >More info	0.35 >More info	WT untreated		Pep2		Original data	GEO bulk
317	Mutant NahG(leaf)	-0.55 >More info	-0.42 >More info	Col-0 (leaf)				Original data	GEO bulk
318	edr1 0 h powdery mildew	0.44 >More info	0.53 >More info	Col-0 0 h powdery mildew				Original data	GEO bulk
319	wavy	0.40 >More info	0.57 >More info	WT				Original data	GEO bulk
320	HSP90 Reduced RNAi-B1	0.42 >More info	0.55 >More info	HSP90 Reduced Col-0 CS60000			All aerial tissue	Original data	GEO bulk
321	WT 1wk -P	0.52 >More info	0.44 >More info	WT 1wk +P		No phosphate medium	seedlings without roots	Original data	GEO bulk
322	WT 1mM phosphate 8 hours.	-0.55 >More info	-0.41 >More info	WT control (not supplemented).				Original data
323	erf104-ko Flg22 4h	0.43 >More info	0.53 >More info	erf104-ko H2O 4h				Original data	GEO bulk
324	FOX line K16331	0.46 >More info	0.50 >More info	empty vector control (T3) FOX lines				Original data	GEO bulk
325	eds16 laser microdissected 5 dpi	-0.44 >More info	-0.52 >More info	Col laser microdissected 5 dpi			LMD leaf epidermal and mesophyll cells	Original data	GEO bulk
326	whole roots 140 mM NaCl 1 hour	0.43 >More info	0.53 >More info	whole roots standard				Original data	GEO bulk
327	ataf1-1 mutant Col-0 Un-inoculated	-0.56 >More info	-0.39 >More info	WT Col-0 Un-inoculated				Original data	GEO bulk
328	dor control	0.56 >More info	0.39 >More info	WT control				Original data	GEO bulk
329	rosettes WT drought	0.58 >More info	0.37 >More info	rosettes WT watered				Original data	GEO bulk
330	siliques AtHb1 control	0.43 >More info	0.52 >More info	siliques WT control		control	silique	Original data	GEO bulk
331	myb3 myb3r4d	0.38 >More info	0.57 >More info	Wild type Col0-9d			whole seedlings	Original data	GEO bulk
332	35S:RPS4 eds1-2 2h	-0.36 >More info	-0.59 >More info	35S:RPS4 2h			leaves	Original data
333	Starch sheath 5 days MS incubation	0.40 >More info	0.54 >More info	Starch sheath T0		MS incubation	laser capture microdissection	Original data	GEO bulk
334	abh1 -ABA	0.53 >More info	0.41 >More info	Col-0 -ABA				Original data	GEO bulk
335	Tsu -Fe 24h Shoots	0.51 >More info	0.43 >More info	Tsu +Fe 24h Shoots				Original data	GEO bulk
336	Salicylic Acid 3 h	0.37 >More info	0.57 >More info	Mock 3 h				Original data	Effect of other inhibitors on seedlings
337	Got7 UV	0.34 >More info	0.60 >More info	Got7 mock		UV	seedling	Original data
338	etr1 1% sucrose 12-day-old	0.44 >More info	0.50 >More info	Col-0 1% sucrose 12-day-old				Original data	GEO bulk
339	cs26 long day	0.39 >More info	0.54 >More info	Leaves-WT-LD			leaf	Original data	GEO bulk
340	del1-1 5dpi	0.61 >More info	0.32 >More info	Col-0 5dpi			mature fully expanded leaves	Original data	GEO bulk
341	pnp1-1 3h +P	0.52 >More info	0.41 >More info	WT 3h +P		Full nutrient medium (+P)	seedlings without roots	Original data	GEO bulk
342	WT light	-0.63 >More info	-0.30 >More info	WT dark				Original data	GEO bulk
343	Laer Flg22 2h	0.51 >More info	0.42 >More info	Laer Control			leaf discs	Original data	GEO bulk
344	Oxidative Stress 3 h (root)	-0.36 >More info	-0.57 >More info	Stress mock 3 h (root)				Original data	Stress treatments
345	hira-root	-0.34 >More info	-0.59 >More info	WT-root			root	Original data
346	Atwrky63	-0.54 >More info	-0.38 >More info	Col0		none	leaf	Original data	GEO bulk
347	TaFLS overexpression line (OE2)	-0.55 >More info	-0.37 >More info	Col-0			Rosette leaves	Original data
348	Glyphosate EC50	0.52 >More info	0.40 >More info	Carrier (Glyphosate)				Original data	GEO bulk
349	ex1ex2flu dark 8hours/30 minute light	-0.57 >More info	-0.35 >More info	col dark 8hours/30 minute light				Original data	GEO bulk
350	rcf1-1 cold 24h	0.51 >More info	0.41 >More info	WT cold 24h		cold at 4°C	seedlings	Original data	GEO bulk
351	penta Pst DC3000 12hpi	0.59 >More info	0.33 >More info	Laer Pst DC3000 12hpi			leaf discs	Original data	GEO bulk
352	A. thaliana-A. halleri hybrid	-0.59 >More info	-0.33 >More info	A. thaliana			mature leaves before flowering	Original data	GEO bulk
353	roottip hypoxia total	0.35 >More info	0.57 >More info	roottip control total				Original data	GEO bulk
354	whole roots 140 mM NaCl 30 minutes	0.35 >More info	0.57 >More info	whole roots standard				Original data	GEO bulk
355	46T-CK	0.30 >More info	0.62 >More info	WT-CK		none		Original data
356	CT101 ozone	0.52 >More info	0.39 >More info	CT101 ctrl		350 ppb ozone exposure for 2hr	whole rosette	Original data
357	Mutant coi1(leaf)	-0.52 >More info	-0.39 >More info	Col-0 (leaf)				Original data	GEO bulk
358	FLIGHT TAGESB plate6 SHOOTS	0.40 >More info	0.51 >More info	GROUND CONTROL TAGESB plate6 SHOOTS			plant tissue	Original data
359	Col-O high light	0.33 >More info	0.58 >More info	Col-O bule light				Original data	GEO bulk
360	Col-0 C2H4 24h	0.54 >More info	0.36 >More info	Col-0 air		4 hour ethylene gas (10 ppm)		Original data	GEO bulk
361	mutant-line409	-0.36 >More info	-0.54 >More info	WT-control			whole plant	Original data	GEO bulk
362	DC3000 7h	0.37 >More info	0.53 >More info	Mock 7h		DC3000		Original data	GEO bulk
363	msh1 recA3 untreated	0.29 >More info	0.61 >More info	WT untreated			above-ground parts	Original data	GEO bulk
364	WT Seedling BL+ABA	0.56 >More info	0.33 >More info	WT Seedling BL				Original data	GEO bulk
365	shoot hypoxia total	0.35 >More info	0.54 >More info	shoot control total				Original data	GEO bulk
366	toc1-1-81hr	0.39 >More info	0.50 >More info	WT-untreated-81hr		none	seedlings aerial tissue	Original data	GEO bulk
367	leaf13	0.38 >More info	0.51 >More info	unwounded leaves		none		Original data	GEO bulk
368	C24 ozone	0.54 >More info	0.34 >More info	C24 ctrl		350 ppb ozone exposure for 2hr	whole rosette	Original data
369	Mutant ufo-1(flower)	0.37 >More info	0.51 >More info	Flowers stage12				Original data	Developmental series; organs / tissues at different ages
370	toc1-1-93hr	0.38 >More info	0.50 >More info	WT-untreated-93hr		none	seedlings aerial tissue	Original data	GEO bulk
371	seedling 3h after Gamma WT	0.38 >More info	0.50 >More info	seedling day 1 unirradiated WT		3h		Original data
372	long 12-degree-	0.33 >More info	0.54 >More info	control long				Original data	GEO bulk
373	rosette leaves lcr	0.35 >More info	0.52 >More info	rosette leaves WT			Young rosette leaves 2mm to 1cm	Original data	GEO bulk
374	miR393 0h	-0.26 >More info	-0.61 >More info	WT 0h			Leaf tissue	Original data	GEO bulk
375	toc1-1-53hr	0.54 >More info	0.32 >More info	WT-untreated-53hr		none	seedlings aerial tissue	Original data	GEO bulk
376	ABA SA 24h	0.33 >More info	0.53 >More info	EtOH 24h		24hr		Original data	GEO bulk
377	ced1	-0.50 >More info	-0.36 >More info	WT PEG 6hr			seedlings	Original data	GEO bulk
378	GO5; harvested 8h continiously maintained in high CO2;	-0.51 >More info	-0.34 >More info	WT; harvested 8h continiously maintained in high CO2;			2 whole rosettes	Original data
379	Rose Bengal 0.5 uM	0.33 >More info	0.52 >More info	Control RB and PER		Rose Bengal		Original data
380	ein2-1 24hpi A. brassicicola	0.30 >More info	0.55 >More info	Col-0 9 hpi A. brassicicola			3rd-5th true leaves	Original data
381	phr1 phl1 Root-Pi	0.52 >More info	0.32 >More info	WT Shoot+Pi			roots	Original data	GEO bulk
382	35SAvr	0.31 >More info	0.53 >More info	Ecotype Col				Original data	GEO bulk
383	gpa1 -ABA GC	-0.26 >More info	-0.58 >More info	Col-0 -ABA GC			Guard cells taken for mature leaves of five week-old plants	Original data	GEO bulk
384	WT resupplied Pi 4h	0.53 >More info	0.30 >More info	WT complete			seedlings	Original data
385	vtc2-1	-0.30 >More info	-0.53 >More info	Col-0			whole plant	Original data	GEO bulk
386	JA	0.33 >More info	0.50 >More info	Col-0 mock			Whole seedling	Original data	GEO bulk
387	penta Control	0.50 >More info	0.32 >More info	Laer Control			leaf discs	Original data	GEO bulk
388	WT no Pi	0.50 >More info	0.32 >More info	WT complete			seedlings	Original data
389	aerial organ callus inducing medium 48 h	0.54 >More info	0.28 >More info	aerial organ callus inducing medium 0 h		48 hours after incubating on callus inducing medium	aerial organ explants	Original data	GEO bulk
390	Blue Light 4 h	0.30 >More info	0.52 >More info	White Light 4 h				Original data	Light treatments
391	bHLH122 ox	-0.29 >More info	-0.53 >More info	WT Col-0		bHLH122 overexpression	shoot	Original data	GEO bulk
392	2hr transitory KNO3 PeR cell	-0.28 >More info	-0.54 >More info	2hr KCl control PeR cell			Pericycle root cells	Original data	GEO bulk
393	D2O	0.58 >More info	0.24 >More info	H2O			seedling	Original data	GEO bulk
394	WT-Dry	0.22 >More info	0.60 >More info	WT-CK		dehydration treatment 1h		Original data
395	sta1	0.50 >More info	0.31 >More info	WT				Original data	GEO bulk
396	exo70A1	0.51 >More info	0.30 >More info	Col-0			whole plant	Original data	GEO bulk
397	C24 UV1	-0.66 >More info	-0.15 >More info	C24 mock		UV	seedling	Original data
398	aerial organ callus inducing medium 96 h	0.52 >More info	0.29 >More info	aerial organ callus inducing medium 0 h		96 hours after incubating on callus inducing medium	aerial organ explants	Original data	GEO bulk
399	Constans-mutant	0.52 >More info	0.28 >More info	Col control			above-ground whole plant	Original data	GEO bulk
400	ein2	0.60 >More info	0.20 >More info	Col-0			Leaves	Original data	GEO bulk
401	oligomycin 1 h	0.28 >More info	0.52 >More info	mock 1 h		1 h_oligo	seedling culture	Original data	GEO bulk
402	NJ15	0.25 >More info	0.55 >More info	mock		sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates	Seedlings	Original data
403	Cambium 5 days NAA	0.26 >More info	0.53 >More info	Stem tissue T0		Interfascicular cambium induced after 5 days NAA in vitro treatment	laser capture microdissection	Original data	GEO bulk
404	WT+chitooctaose	0.28 >More info	0.51 >More info	WT+water		chitooctaose	seedlings	Original data	GEO bulk
405	rgs1+no sugars	-0.22 >More info	-0.56 >More info	WT+no sugars			rosette leaves	Original data	GEO bulk
406	Shoot P recovery	0.53 >More info	0.24 >More info	Shoot -P		Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days		Original data	GEO bulk
407	TA induced	0.27 >More info	0.50 >More info	Methanol TA			Suspension cells	Original data	GEO bulk
408	SA Treated	0.69 >More info	0.08 >More info	Water				Original data	GEO bulk
409	AsAKiin11 T1	0.52 >More info	0.24 >More info	C2 C2del and (As)AKiin11 control T1		one day post infusion with Agrobacterium containing antisense (As)AKiin11	Arabidopsis rosette leaves	Original data
410	cat2-long-day 4d	-0.63 >More info	-0.13 >More info	Col0-LD4		transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
411	gapcp1gapcp2 ABA	-0.17 >More info	-0.59 >More info	WT ABA		ABA	seedling	Original data	GEO bulk
412	amiRAP hypoxic	-0.15 >More info	-0.61 >More info	hypoxic		hypoxia		Original data	GEO bulk
413	spch	0.53 >More info	0.22 >More info	Col-0 WT			whole seedling	Original data	GEO bulk
414	petiole in D	0.52 >More info	0.23 >More info	petiole in WL			petioles	Original data	GEO bulk
415	FarRed Light 4 h	0.24 >More info	0.51 >More info	White Light 4 h				Original data	Light treatments
416	eds16 whole leaf 1dpi	-0.19 >More info	-0.56 >More info	Col whole leaf 1dpi			whole leaf	Original data	GEO bulk
417	pnp1-1 1wk -P	0.53 >More info	0.21 >More info	WT 1wk -P		No phosphate medium	seedlings without roots	Original data	GEO bulk
418	IAA7mII over-expressor IAA Treated	0.05 >More info	0.69 >More info	empty vector IAA Treated				Original data	GEO bulk
419	Col in Pi deficiency medium	0.20 >More info	0.54 >More info	Col in control medium			root	Original data	GEO bulk
420	CMV-A2b mutant	0.51 >More info	0.22 >More info	Mock-At			Aerial tissues	Original data	GEO bulk
421	Bur-0-1h IAA	0.50 >More info	0.23 >More info	Bur-0h IAA			whole plant	Original data	GEO bulk
422	Whole root - low pH 1H	0.19 >More info	0.54 >More info	Whole root - Std pH 1H		pH 4.6 for 1 hr		Original data	GEO bulk
423	P-chlorophenoxy- isobutyric acid 3 h	0.18 >More info	0.54 >More info	Mock 3 h				Original data	Effect of auxin inhibitors on seedlings
424	Red/FR Light45min	0.10 >More info	0.61 >More info	FarRed Light 45min				Original data	Light treatments
425	opr3 OPDA 2 h	0.18 >More info	0.53 >More info	opr3 0 h				Original data	GEO bulk
426	2hr continuous KNO3 PeR cell	-0.19 >More info	-0.52 >More info	2hr KCl control PeR cell			Pericycle root cells	Original data	GEO bulk
427	35:SUB1C	0.52 >More info	0.16 >More info	WT			whole seedling	Original data	GEO bulk
428	JA 3h	0.08 >More info	0.59 >More info	EtOH 3h		3hr		Original data	GEO bulk
429	vte2 leaves 120h LT	0.62 >More info	0.04 >More info	Col leaves 120h LT		12h	9-11th adult leaves	Original data
430	dorn1-1 Root 100 mM ATP 30 min	-0.15 >More info	-0.51 >More info	Col-0 Root 100 mM ATP 30 min			Roots of 5 day-old seedlings	Original data
431	Shoot -P	-0.51 >More info	-0.14 >More info	Shoot Mock		P_starvation 10-day Phosphate starvation		Original data	GEO bulk
432	Red/FR Light 4 h	-0.14 >More info	-0.51 >More info	FarRed Light 4 h				Original data	Light treatments
433	MYB46-GR DEX	0.14 >More info	0.51 >More info	MYB46-GR mock			Young rosette leaves (5-7th)	Original data	GEO bulk
434	Ws leaf 100mM NaCl	0.13 >More info	0.52 >More info	Ws leaf 0mM NaCl			leaf	Original data	GEO bulk
435	Heat shock optimum	-0.00 >More info	0.65 >More info	Heat shock baseline		Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
436	Ws 100mM NaCl	0.13 >More info	0.52 >More info	Ws 0mM NaCl		100mM NaCl	leaf	Original data	GEO bulk
437	toc1-1-77hr	0.54 >More info	0.10 >More info	WT-untreated-77hr		none	seedlings aerial tissue	Original data	GEO bulk
438	ABA JA 24h	0.06 >More info	0.56 >More info	EtOH 24h		24hr		Original data	GEO bulk
439	HairpinZ 4 h (leaf)	0.65 >More info	-0.03 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
440	pvip1 pvip2 seedling	0.64 >More info	-0.02 >More info	Col-0 seedling			seedling	Original data	GEO bulk
441	AAF-OX	0.50 >More info	0.12 >More info	Col-0			Rosette leaf	Original data	GEO bulk
442	gun5 control	0.10 >More info	0.52 >More info	Col-0 control				Original data	GEO bulk
443	Ambient CO2 leaf primordia	-0.55 >More info	-0.06 >More info	Control for tissue data			leaf primordia	Original data
444	opr3 JA 0.5 h	-0.08 >More info	0.69 >More info	opr3 0 h				Original data	GEO bulk
445	3x(m)	0.07 >More info	0.52 >More info	2x			two week old seedlings	Original data
446	Col PSTDC3000 24h	0.72 >More info	-0.13 >More info	Col 0h			Leaf	Original data	GEO bulk
447	Col-0 24hpi A. brassicicola	0.56 >More info	0.02 >More info	Col-0 24hpi mock			3rd-5th true leaves	Original data
448	Mutant sav3-2 (SH)	0.08 >More info	0.50 >More info	Col-0 (SH)				Original data	GEO bulk
449	sav3-2 shade	0.08 >More info	0.50 >More info	Col-0 shade			seedlings	Original data	GEO bulk
450	Lip0 UV	0.54 >More info	0.03 >More info	Lip0 mock		UV	seedling	Original data
451	Laer pretreat JA Flg22 0h	-0.00 >More info	-0.57 >More info	Laer pretreat water control			leaf discs	Original data	GEO bulk
452	bri1-116	-0.16 >More info	0.73 >More info	Col			seedling	Original data	GEO bulk
453	FarRed Light 45min	-0.01 >More info	-0.51 >More info	White Light 45min				Original data	Light treatments
454	P.syringae vir 4 h (leaf)	0.50 >More info	0.00 >More info	Mock 4 h (leaf)				Original data	Elicitor treatments
455	root - 04% oxygen - 2h	-0.06 >More info	0.55 >More info	root - 21% oxygen - 2h				Original data	GEO bulk
456	TaFLS overexpression line (OE1)	-0.60 >More info	0.11 >More info	Col-0			Rosette leaves	Original data
457	Mh0 UV	-0.59 >More info	0.12 >More info	Mh0 mock		UV	seedling	Original data
458	polysome mRNA eif3k	-0.09 >More info	0.55 >More info	polysome mRNA WT			aerial part	Original data	GEO bulk
459	opr3 OPDA 0.5 h	-0.09 >More info	0.54 >More info	opr3 0 h				Original data	GEO bulk
460	seed germinating in countinuous light 24h SL	-0.26 >More info	0.67 >More info	Control for tissue data			seed	Original data	GEO bulk
461	P. infestans 6 h (leaf)	0.53 >More info	-0.15 >More info	Mock 6 h (leaf)				Original data	Elicitor treatments
462	CCA1-ox 6am non-polysomal	-0.18 >More info	0.51 >More info	WT 6am non-polysomal			aerial part	Original data
463	Shoot apex inflorescence (after bolting)	-0.41 >More info	0.65 >More info	Control for tissue data				Original data	Developmental series; organs / tissues at different ages
464	Light 3day hml	-0.39 >More info	0.50 >More info	0h hml				Original data