4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on gun5 control
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "gun5 control"  Help Download transcriptome of top 30
Score Experiment Correlation from
gun5 control		 Correlation to
gun5 control		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 gun5 control 1.00 >More info 1.00 >More info Col-0 control Original data GEO bulk
2 gun1-9 control 0.87 >More info 0.76 >More info Col-0 control Original data GEO bulk
3 MPK6 ox Shoot Hypoxia 0.43 >More info 0.82 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
4 toc1-1-89hr 0.54 >More info 0.68 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
5 Mutant arf2-6 -0.52 >More info -0.66 >More info Col Original data GEO bulk
6 downy mildew cotyledons late stage 0.54 >More info 0.62 >More info mock inoculated Cotyledons Original data GEO bulk
7 SCL3 OE -0.56 >More info -0.56 >More info Col-0 whole root Original data GEO bulk
8 mil4 sid2 -0.56 >More info -0.55 >More info Col rosettes Original data GEO bulk
9 WT NAA 1h 0.53 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
10 WT-Dry 0.57 >More info 0.54 >More info WT-CK dehydration treatment 1h Original data
11 Mutant ga1-5 -0.57 >More info -0.52 >More info Ler-1 Original data Comparison of plant hormone related mutant
12 sid2 -0.55 >More info -0.49 >More info Col rosettes Original data GEO bulk
13 pho1 0.56 >More info 0.47 >More info Col2WT Original data GEO bulk
14 WT 90-105 min Xanthomonas 0.68 >More info 0.35 >More info WT T0 Original data GEO bulk
15 Laer Flg22(Agrobacterium) 2h -0.45 >More info -0.58 >More info Laer Control leaf discs Original data GEO bulk
16 20h Col-0 -0.33 >More info -0.70 >More info 00h Col-0 Original data GEO bulk
17 root - 08% oxygen - 2h 0.26 >More info 0.76 >More info root - 21% oxygen - 2h Original data GEO bulk
18 WT 1wk -P 0.53 >More info 0.46 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
19 0.5h light (+Lincomycin) 0.54 >More info 0.45 >More info 0.5h light (-Lincomycin) seedlings Original data GEO bulk
20 Col-0 wt Hypoxic 0.33 >More info 0.66 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
21 piffq 2d WL -0.24 >More info -0.74 >More info WT 2d WL whole seedling Original data GEO bulk
22 MPK6 ox Root Hypoxia 0.28 >More info 0.70 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
23 lht1 untreated 0.60 >More info 0.37 >More info WT untreated untreated leaf Original data GEO bulk
24 Mutant ufo-1(shoot apex) 0.60 >More info 0.37 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
25 sfr2 control 0.54 >More info 0.43 >More info WT control All aerial tissue Original data GEO bulk
26 IAA7mII over-expressor IAA Treated 0.28 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
27 toc1-1-65hr 0.41 >More info 0.56 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
28 WT cold 12 h -0.41 >More info -0.56 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
29 mdh -0.23 >More info -0.74 >More info Col Original data GEO bulk
30 xyl-grown cell culture- 1h 1mM Fru 0.40 >More info 0.56 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
31 rosettes myoox drought -0.38 >More info -0.58 >More info rosettes myoox watered Original data GEO bulk
32 Heat 2 days recovery -0.56 >More info -0.39 >More info Mock 2 days recovery seedling Original data GEO bulk
33 Mutant lwd1_lwd2 -0.28 >More info -0.67 >More info Wildtype for phy mutants Original data GEO bulk
34 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.28 >More info -0.67 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
35 Atss3 Light1 0.37 >More info 0.58 >More info Atss3 Dark0.5 Original data GEO bulk
36 rsa3-1 Na 24h 0.43 >More info 0.52 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
37 eds16 whole leaf 7d UI -0.54 >More info -0.40 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
38 CBF3 100mM NaCl -0.55 >More info -0.39 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
39 ced1 0.54 >More info 0.40 >More info WT PEG 6hr seedlings Original data GEO bulk
40 Cd 18h root 0.35 >More info 0.59 >More info WT-Untreated Root Original data GEO bulk
41 WT Shoot Hypoxia 0.32 >More info 0.62 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
42 ACN1-2 0.32 >More info 0.62 >More info col-7 Original data GEO bulk
43 seedling 12h after Gamma atm-1 -0.28 >More info -0.65 >More info seedling day 1 unirradiated atm-1 12h Original data
44 toc1-1-85hr 0.42 >More info 0.51 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
45 ein2-1 24hpi A. brassicicola 0.41 >More info 0.52 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
46 upf1 0.57 >More info 0.35 >More info WT whole plant Original data GEO bulk
47 rosettes WT drought -0.41 >More info -0.51 >More info rosettes WT watered Original data GEO bulk
48 R. solani AG2-1 0.41 >More info 0.50 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
49 R. solani AG8 0.51 >More info 0.39 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
50 irradiated leaf (WT 5d) 0.38 >More info 0.52 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
51 08h Col-0 -0.33 >More info -0.57 >More info 00h Col-0 Original data GEO bulk
52 16h Col-0 -0.21 >More info -0.68 >More info 00h Col-0 Original data GEO bulk
53 MIL4 ox -0.39 >More info -0.50 >More info Col Original data GEO bulk
54 Elevated CO2 leaf primordia 0.34 >More info 0.54 >More info Ambient CO2 leaf primordia leaf primordia Original data
55 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
56 Col-0 2HS 0.27 >More info 0.60 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
57 seedling 12h after Gamma WT -0.30 >More info -0.57 >More info seedling day 1 unirradiated WT 12h Original data
58 arr-BA-sample 0.61 >More info 0.25 >More info Wt-BA-sample seedling Original data
59 ACN1-2 Sucrose 0.24 >More info 0.62 >More info Col-7 Sucrose Original data GEO bulk
60 WT mitomycin C 0.56 >More info 0.29 >More info WT mock shoot apical meristem Original data
61 mbd6 mutant thaliana 10-day-old seedling 0.57 >More info 0.28 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
62 pab polysome -0.20 >More info -0.64 >More info WT polysome seedling shoot/aerial seedling Original data
63 seedling 12h after HZE atm-1 -0.22 >More info -0.62 >More info seedling day 1 unirradiated atm-1 12h Original data
64 Col-0 DEX Shade -0.50 >More info -0.33 >More info Col-0 DEX WL seedlings Original data
65 nia1nia2noa1-2 0.54 >More info 0.29 >More info Col-0 whole seedlings Original data GEO bulk
66 shoot control pGL2 0.29 >More info 0.54 >More info shoot control total Original data GEO bulk
67 pepr1-1 Pepr2-3 untreated 0.27 >More info 0.56 >More info WT untreated untreated Original data GEO bulk
68 dde2-2 24hpi A. brassicicola 0.31 >More info 0.52 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
69 WT Atum 1h 0.52 >More info 0.30 >More info WT 0h Leaf tissue Original data GEO bulk
70 Wt-BA-sample -0.50 >More info -0.32 >More info Wt-dmso-sample seedling Original data
71 prmt5-5 -0.50 >More info -0.32 >More info WT Col continuous light Aerial tissue Original data GEO bulk
72 Bur-0-1h IAA 0.53 >More info 0.29 >More info Bur-0h IAA whole plant Original data GEO bulk
73 35S:PCO1 hypoxia -0.20 >More info -0.61 >More info WT hypoxia whole rosette Original data
74 seedling 6h after HZE atm-1 -0.26 >More info -0.55 >More info seedling day 1 unirradiated atm-1 6h Original data
75 swn-7 -0.57 >More info -0.24 >More info Col whole plant Original data GEO bulk
76 shoot hypoxia pGL2 0.29 >More info 0.51 >More info shoot hypoxia total Original data GEO bulk
77 rcf1-1 cold 12h 0.50 >More info 0.29 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
78 ANOXIA -0.29 >More info -0.50 >More info ANOXIA+SUCROSE Original data GEO bulk
79 A6 mutant 0.52 >More info 0.26 >More info WT rosette leaves Rosette leaves Original data GEO bulk
80 total mRNA eif3k 0.52 >More info 0.26 >More info total mRNA WT aerial part Original data GEO bulk
81 Mutant lfy-12(shoot apex) 0.52 >More info 0.26 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
82 root - 04% oxygen - 2h 0.01 >More info 0.77 >More info root - 21% oxygen - 2h Original data GEO bulk
83 Aerobic prt6 0.15 >More info 0.63 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
84 WT cold 24h -0.21 >More info -0.57 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
85 CBF3 0mM NaCl -0.51 >More info -0.26 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
86 SA 0.50 >More info 0.27 >More info WT mock Whole seedling Original data GEO bulk
87 Mutant clv3-7(flower) -0.51 >More info -0.26 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
88 MYB51 OE -0.53 >More info -0.24 >More info WT for ATR1/MYB51 Original data GEO bulk
89 vtc1 (II) 0.53 >More info 0.24 >More info Col (II) rosette Original data GEO bulk
90 IAA 0.5 h 0.16 >More info 0.61 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
91 phyABDE 4-day dark- 2 hours Rc50 -0.18 >More info -0.59 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
92 root - 04% oxygen - 48h 0.15 >More info 0.61 >More info root - 21% oxygen - 48h Original data GEO bulk
93 clf-28 -0.53 >More info -0.21 >More info Col whole plant Original data GEO bulk
94 ein5-1 ski2-3 0.52 >More info 0.22 >More info Col-0 aerial tissue Original data
95 Col in Pi deficiency medium 0.13 >More info 0.61 >More info Col in control medium root Original data GEO bulk
96 ABA control -0.09 >More info -0.65 >More info No ABA control Original data GEO bulk
97 4C 1h 0.16 >More info 0.56 >More info 4C 0h Original data GEO bulk
98 WT 2-4h Xanthomonas 0.50 >More info 0.22 >More info WT T0 Original data GEO bulk
99 green tissue gl3 egl3 -0.50 >More info -0.21 >More info green tissue WT L. er Original data GEO bulk
100 root - 08% oxygen - 48h 0.07 >More info 0.64 >More info root - 21% oxygen - 48h Original data GEO bulk
101 CHS-silenced type -0.53 >More info -0.17 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
102 1h +Pi -0.17 >More info -0.53 >More info 1h -Pi root Original data GEO bulk
103 seedlings-week-old RECA1-overexpressing
transgenic		 0.51 >More info 0.19 >More info seedlings-week-old Col-0 seedlings Original data
104 root - 04% oxygen - 30min 0.01 >More info 0.69 >More info root - 21% oxygen - 30min Original data GEO bulk
105 shoot hypoxia total 0.16 >More info 0.53 >More info shoot control total Original data GEO bulk
106 bri1-116 -0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
107 root - 08% oxygen - 30min 0.05 >More info 0.63 >More info root - 21% oxygen - 30min Original data GEO bulk
108 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
109 WT Root Hypoxia 0.10 >More info 0.58 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
110 lht1 PstDC3000 48h 0.52 >More info 0.15 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
111 Col0-PsmES4326-24hpi 0.06 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
112 Laer Alternaria 3dpi -0.51 >More info -0.15 >More info Laer Control leaf discs Original data GEO bulk
113 irradiated leaf (cmt 5d) 0.54 >More info 0.11 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
114 leaf chr11-1chr17-1 0.54 >More info 0.11 >More info leaf Col-0 leaves Original data GEO bulk
115 Shoot apex inflorescence (after bolting) -0.00 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
116 seed germinating in countinuous light 24h SL -0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
117 root hypoxia total 0.12 >More info 0.52 >More info root control total Original data GEO bulk
118 upf3 0.52 >More info 0.10 >More info WT whole plant Original data GEO bulk
119 WT NAA 2h -0.06 >More info 0.63 >More info WT 0h Leaf tissue Original data GEO bulk
120 root - 01% oxygen - 30min -0.10 >More info 0.65 >More info root - 21% oxygen - 30min Original data GEO bulk
121 Leafminer damaged seedlings -0.02 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
122 opr3 OPDA 0.5 h -0.09 >More info 0.62 >More info opr3 0 h Original data GEO bulk
123 dor control 0.61 >More info -0.09 >More info WT control Original data GEO bulk
124 siliques AtHb1 control -0.00 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
125 Laer pretreat GA Flg22 1h -0.21 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
126 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
127 ged1 seedlings -0.10 >More info 0.51 >More info Ws seedlings Original data GEO bulk
128 Ws seedlings 0.10 >More info -0.51 >More info ged1 seedlings Original data GEO bulk
129 root - 01% oxygen - 2h -0.21 >More info 0.59 >More info root - 21% oxygen - 2h Original data GEO bulk