4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col-0 SA
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List of experiments correlated with "Col-0 SA"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col-0 SA		 Correlation to
Col-0 SA		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col-0 SA 1.00 >More info 1.00 >More info Col-0 Original data GEO bulk
2 IMI 4mM 0.80 >More info 0.76 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
3 Cor 10h 0.77 >More info 0.71 >More info Mock 10h Cor Original data GEO bulk
4 35S:RPS4 eds1-2 8h -0.78 >More info -0.69 >More info 35S:RPS4 8h leaves Original data
5 HopZ1a treated ulp1c ulp1d 0.77 >More info 0.67 >More info col Original data GEO bulk
6 HopZ1a treated 0.75 >More info 0.69 >More info col Original data GEO bulk
7 35S:RPS4 eds1-2 24h -0.80 >More info -0.63 >More info 35S:RPS4 24h leaves Original data
8 Col0-PsmES4326-24hpi 0.81 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
9 Laer treat paclobutrazol (PAC) 0.75 >More info 0.64 >More info Laer Control leaf discs Original data GEO bulk
10 mkk1/mkk2 24h BTH rep 0.77 >More info 0.62 >More info Col-0 24h BTH rep Original data GEO bulk
11 Col-0-avrB-6h 0.70 >More info 0.69 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
12 Mutant gh3.5-1D (AvrRpt2) 0.77 >More info 0.61 >More info Col-0 (AvrRpt2) Original data GEO bulk
13 col-5 DC3000 12h 0.69 >More info 0.69 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
14 8h-DC3000 avrRpm1 0.72 >More info 0.65 >More info 8h-DC3000 leaves Original data GEO bulk
15 cat2-2; 8h switch to ambient CO2 concentrations; 0.70 >More info 0.66 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
16 Col-0 under 4 days salt 0.67 >More info 0.67 >More info Col-0 under control 4 days salt treatment rosette Original data
17 gh3.5-1D 48 hpi 0.77 >More info 0.57 >More info Col-0 uninoculated Original data GEO bulk
18 DC3000 7h 0.73 >More info 0.60 >More info Mock 7h DC3000 Original data GEO bulk
19 Pto inoculated 0.72 >More info 0.61 >More info col Original data GEO bulk
20 AvrRpt2 Col-0 6hpi 0.69 >More info 0.63 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
21 pad4-PsmES4326-24hpi -0.74 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
22 E.coli 0157 H7 7h 0.73 >More info 0.58 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
23 Col-0 flu HL 3h 0.74 >More info 0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
24 col-5 hrpA 12h 0.65 >More info 0.65 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
25 bak1-3 +Pep2 10h 0.69 >More info 0.61 >More info WT +Pep2 10h Pep2 Original data GEO bulk
26 OE WRKY40.4 high light 0.66 >More info 0.63 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
27 WT-SA 0.67 >More info 0.62 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
28 penta Alternaria 3dpi 0.70 >More info 0.59 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
29 Light 3day wt -0.66 >More info -0.62 >More info 0h wt Original data
30 upf3 0.70 >More info 0.57 >More info WT whole plant Original data GEO bulk
31 Botrytis cinerea 48h 0.63 >More info 0.63 >More info control 48h Original data GEO bulk
32 DFPM 0.62 >More info 0.64 >More info control Original data GEO bulk
33 CMP 24hr 0.63 >More info 0.63 >More info Acetone 24hr root Original data GEO bulk
34 del1-1 mutant 5d uninfected 0.64 >More info 0.61 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
35 npr1-PsmES4326-24hpi -0.67 >More info -0.58 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
36 AvrRpm1 2 h (leaf) 0.63 >More info 0.61 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
37 sfr3 cold 0.57 >More info 0.66 >More info WT cold All aerial tissue Original data GEO bulk
38 pmr5 pmr6 0.64 >More info 0.59 >More info Col-0 Original data GEO bulk
39 penta Pst DC3000 12hpi 0.74 >More info 0.49 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
40 CLO 4mM 0.56 >More info 0.66 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
41 Laer pretreat GA Flg22 1h 0.51 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
42 Shoot -Cs 0.48 >More info 0.74 >More info Control-shoot Original data GEO bulk
43 Col BTH 0.54 >More info 0.67 >More info Col rosettes Original data GEO bulk
44 Fenclorim 4hr 0.60 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
45 Col-Luc WT 3h antimycin A 0.56 >More info 0.65 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
46 DC3000 24h 0.66 >More info 0.55 >More info Mock 24h DC3000 Original data GEO bulk
47 npr1-1 SA -0.66 >More info -0.54 >More info Col-0 SA complete seedling Original data
48 CMV-WT 0.64 >More info 0.56 >More info Mock-At Aerial tissues Original data GEO bulk
49 WT 2-4h Xanthomonas 0.52 >More info 0.68 >More info WT T0 Original data GEO bulk
50 ABA DFPM 0.67 >More info 0.53 >More info control Original data GEO bulk
51 GST NPP1 4 h (leaf) 0.59 >More info 0.61 >More info Mock 4 h (leaf) Original data Elicitor treatments
52 Ws 100mM NaCl 0.60 >More info 0.59 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
53 Ws leaf 100mM NaCl 0.60 >More info 0.59 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
54 anac017-2 AntimycinA 3h -0.51 >More info -0.68 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
55 cs26 long day 0.64 >More info 0.55 >More info Leaves-WT-LD leaf Original data GEO bulk
56 safener treated 0.57 >More info 0.62 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
57 E.coli TUV86 2 fliC 7h 0.62 >More info 0.56 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
58 gai Control 0.67 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
59 mkk1/mkk2 control rep 0.64 >More info 0.54 >More info Col-0 Time 0 rep Original data GEO bulk
60 Col ozone 2d 0.60 >More info 0.58 >More info Col clean-air 2d ozone Original data GEO bulk
61 dor drought 0.59 >More info 0.58 >More info WT drought Original data GEO bulk
62 eds16 whole leaf 7dpi -0.62 >More info -0.55 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
63 rosette Dark Wounded 0.48 >More info 0.69 >More info rosette Dark Control Original data GEO bulk
64 del1-1 5dpi 0.41 >More info 0.76 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
65 Leafminer damaged seedlings 0.60 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
66 Nicotinamide-93hr 0.64 >More info 0.52 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
67 sid2-1 cold -0.59 >More info -0.56 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
68 Col-0 C2H4 24h 0.61 >More info 0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
69 smg5-2 0.59 >More info 0.55 >More info WT whole plant Original data GEO bulk
70 Col whole leaf 7dpi 0.51 >More info 0.63 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
71 ataf1-1 mutant Col-0 Bgh inoculated 0.51 >More info 0.63 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
72 Nicotinamide-53hr 0.58 >More info 0.55 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
73 Nicotinamide-49hr 0.66 >More info 0.47 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
74 DC3000 2 h (leaf) 0.57 >More info 0.56 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
75 low CO2 + light 0.58 >More info 0.55 >More info normal CO2 + light Original data GEO bulk
76 IRP1-OE-Fe--shoot 0.65 >More info 0.48 >More info COL-0-Fe--shoot shoot Original data
77 Laer pretreat GA+JA Flg22 1h 0.62 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
78 pnp1-1 3h +P 0.62 >More info 0.50 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
79 Mutant siz1-3 (Drought) 0.56 >More info 0.56 >More info Col-0 (Drought) Original data GEO bulk
80 Flagellin 4 h (leaf) 0.50 >More info 0.62 >More info Mock 4 h (leaf) Original data Elicitor treatments
81 siz1-3 drought 0.56 >More info 0.56 >More info Col-0 drought Original data GEO bulk
82 flu over-tAPX 0.44 >More info 0.67 >More info WT Col Original data GEO bulk
83 WT AntimycinA 3h 0.44 >More info 0.67 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
84 upf1 0.62 >More info 0.49 >More info WT whole plant Original data GEO bulk
85 CMP 4hr 0.50 >More info 0.61 >More info Acetone 4hr root Original data GEO bulk
86 lht1 PstDC3000 48h 0.60 >More info 0.51 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
87 ASL9-ox -0.59 >More info -0.52 >More info WT aerial parts of seedlings Original data GEO bulk
88 flu 0.48 >More info 0.63 >More info WT Col Original data GEO bulk
89 Leafminer locally damaged thaliana seedlings 0.60 >More info 0.50 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
90 Fenclorim 24hr 0.58 >More info 0.52 >More info Acetone 24hr root Original data GEO bulk
91 AsAKiin11 T2 0.59 >More info 0.51 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
92 Cor hrpS 10h 0.67 >More info 0.43 >More info Mock 10h Cor hrpS Original data GEO bulk
93 ARR21C-ox 0.74 >More info 0.36 >More info Col-0 Original data ARR21C overexpression
94 P.syringae AvrRpt2 4 h (leaf) 0.71 >More info 0.39 >More info Mock 4 h (leaf) Original data Elicitor treatments
95 cpr5scv1 0.66 >More info 0.43 >More info WT(COL) Original data GEO bulk
96 cs26 short-day -0.61 >More info -0.48 >More info Leaves-WT-SD leaf Original data GEO bulk
97 shoots bhlh100/101 0uM Fe 0.51 >More info 0.57 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
98 ein2-1 9 hpi A. brassicicola 0.54 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
99 Rsch 3d 0.67 >More info 0.41 >More info Rsch CA Leaves Original data
100 Mutant coi1(leaf) -0.69 >More info -0.39 >More info Col-0 (leaf) Original data GEO bulk
101 Sulfometuron EC50 0.51 >More info 0.57 >More info Carrier Original data GEO bulk
102 Nicotinamide-73hr 0.55 >More info 0.53 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
103 WT flg22 2h 0.38 >More info 0.70 >More info WT 0h Leaf tissue Original data GEO bulk
104 SA 4mM 0.48 >More info 0.60 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
105 UV 0.62 >More info 0.45 >More info WT aerial region Original data GEO bulk
106 coi1-16 ein2 sid2 ctrl -0.58 >More info -0.49 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
107 shoot-10 μM DEX- 3 hr 0.52 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
108 Col-0 9 hpi A. brassicicola 0.57 >More info 0.49 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
109 hrpA fliC 7h 0.51 >More info 0.55 >More info Mock 7h hrpA fliC Original data GEO bulk
110 Nicotinamide-65hr 0.58 >More info 0.48 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
111 HSP90 Reduced RNAi-B1 0.62 >More info 0.43 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
112 ced1 -0.60 >More info -0.45 >More info WT PEG 6hr seedlings Original data GEO bulk
113 rosette Light Wounded 0.40 >More info 0.65 >More info rosette Light Control Original data GEO bulk
114 Heat shock optimum 0.40 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
115 CMV-A2b mutant 0.43 >More info 0.62 >More info Mock-At Aerial tissues Original data GEO bulk
116 Laer pretreat GA+JA Flg22 0h 0.58 >More info 0.47 >More info Laer pretreat water control leaf discs Original data GEO bulk
117 Nicotinamide-69hr 0.58 >More info 0.47 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
118 ice1 control 0.50 >More info 0.54 >More info WT control Original data GEO bulk
119 wrky33 Bc inoculation 14h 0.59 >More info 0.45 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
120 msh1 stunt 0.54 >More info 0.50 >More info WT Col-0 above ground part of plant Original data GEO bulk
121 Nicotinamide-81hr 0.55 >More info 0.49 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
122 penta Control 0.60 >More info 0.44 >More info Laer Control leaf discs Original data GEO bulk
123 shoot-10 μM DEX- 6 hr 0.53 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
124 Col 3d 0.57 >More info 0.47 >More info Col CA Leaves Original data
125 GSH 0.56 >More info 0.48 >More info control GSH treated seedlings Original data GEO bulk
126 pmr4-1 powdery mildew 0.47 >More info 0.57 >More info WT powdery mildew uninoculated Original data GEO bulk
127 CT101 ozone 0.57 >More info 0.46 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
128 cpr5 0.66 >More info 0.37 >More info WT(COL) Original data GEO bulk
129 Laer Flg22 2h 0.53 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
130 sid2-PsmES4326-24hpi -0.50 >More info -0.53 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
131 Laer pretreat GA+JA Flg22 2h 0.65 >More info 0.38 >More info Laer pretreat water control leaf discs Original data GEO bulk
132 low CO2 + dark 0.50 >More info 0.53 >More info normal CO2 + light Original data GEO bulk
133 SLWF infested 0.57 >More info 0.46 >More info SLWF uninfested rosette tissue Original data GEO bulk
134 Nicotinamide-57hr 0.58 >More info 0.45 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
135 Phaseolicola 2 h (leaf) 0.46 >More info 0.57 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
136 hrpA 7h 0.47 >More info 0.56 >More info Mock 7h hrpA Original data GEO bulk
137 WT 3h -P 0.54 >More info 0.48 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
138 cpr5 0.57 >More info 0.45 >More info WT seedling Original data GEO bulk
139 Ambient CO2 LIMITING N NIGHT -0.62 >More info -0.40 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
140 leaf chr11-1chr17-1 0.67 >More info 0.35 >More info leaf Col-0 leaves Original data GEO bulk
141 Lipopolysaccaride4 h (leaf) 0.44 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
142 mpk6-ko Flg22 4h 0.39 >More info 0.63 >More info mpk6-ko H2O 4h Original data GEO bulk
143 1 h Light IP RNA -0.40 >More info -0.62 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
144 Nicotinamide-85hr 0.52 >More info 0.49 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
145 toc1-1-49hr 0.64 >More info 0.37 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
146 WT cold 0.63 >More info 0.38 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
147 lht1 untreated 0.52 >More info 0.49 >More info WT untreated untreated leaf Original data GEO bulk
148 atmospheric CO2 low Mg shoot 0.61 >More info 0.40 >More info atmospheric CO2 normal Mg shoot Shoot Original data
149 camta1/2/3 warm 0.49 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
150 shoot-10 μM DEX- 12 hr 0.44 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
151 pnp1-1 1wk -P 0.52 >More info 0.48 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
152 sid2-2 mock -0.57 >More info -0.43 >More info Col0 mock DMSO control rosette leaves Original data GEO bulk
153 Laer Flg22+GA 2h 0.50 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
154 Te ozone 0.50 >More info 0.50 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
155 Seedling-HeatStressed TOTALmRNA 0.54 >More info 0.46 >More info Seedling-control TOTALmRNA seedling Original data
156 WT Col-0 Bgh inoculated 0.39 >More info 0.61 >More info WT Col-0 Un-inoculated Original data GEO bulk
157 miR393 0h -0.45 >More info -0.55 >More info WT 0h Leaf tissue Original data GEO bulk
158 sfr6 drought -0.41 >More info -0.59 >More info WT drought All aerial tissue Original data GEO bulk
159 Phytoprostane A1 4 h 0.52 >More info 0.47 >More info Col-0 Original data GEO bulk
160 Col leaf 100mM NaCl 0.50 >More info 0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
161 Col leaf 100mM NaCl 0.50 >More info 0.49 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
162 Col 100mM NaCl 0.50 >More info 0.49 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
163 S58-2 0.55 >More info 0.44 >More info wt Original data GEO bulk
164 camta1/2/3 24h cold 0.50 >More info 0.49 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
165 Nicotinamide-89hr 0.52 >More info 0.47 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
166 aox1a(line) MLD stressed 0.55 >More info 0.44 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
167 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.49 >More info 0.50 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
168 Laer Flg22 1h 0.45 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
169 3x(m) 0.30 >More info 0.69 >More info 2x two week old seedlings Original data
170 ein2-PsmES4326-24hpi -0.59 >More info -0.39 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
171 Shoot submergence 24h 0.52 >More info 0.46 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
172 pmr5 0.52 >More info 0.46 >More info Col-0 Original data GEO bulk
173 ice1 6H Cold 0.44 >More info 0.54 >More info WT 6H Cold Original data GEO bulk
174 ORS1 induced 0.62 >More info 0.35 >More info mock-induced rosette leaves Original data GEO bulk
175 Atss3 Light4 -0.50 >More info -0.47 >More info Atss3 Dark0.5 Original data GEO bulk
176 abi4 vtc2 (I) 0.58 >More info 0.39 >More info Col (I) rosette Original data GEO bulk
177 hrcC 0.38 >More info 0.59 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
178 efr-1 +elf18 10h -0.42 >More info -0.55 >More info WT +elf18 10h elf18 Original data GEO bulk
179 Seedling KUA1-IOX est 0.45 >More info 0.52 >More info Seedling KUA1-IOX mock Original data
180 Nicotinamide-61hr 0.58 >More info 0.38 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
181 ckh1 CK200 0.52 >More info 0.44 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
182 Rsch 1d 0.63 >More info 0.33 >More info Rsch CA Leaves Original data
183 pnp1-1 1wk +P 0.52 >More info 0.44 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
184 Seedling-HeatStressed POLYSOMESmRNA 0.54 >More info 0.42 >More info Seedling-control POLYSOMESmRNA seedling Original data
185 S15-118 0.53 >More info 0.43 >More info wt Original data GEO bulk
186 Heat and anoxia 0.46 >More info 0.50 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
187 P.p 10.5hai 0.46 >More info 0.50 >More info At-Control roots Original data GEO bulk
188 Te 1d 0.55 >More info 0.40 >More info Te CA Leaves Original data
189 Shoot -K 0.55 >More info 0.40 >More info Control-shoot Original data GEO bulk
190 K starvation (shoot) 0.55 >More info 0.40 >More info Ws (shoot) Original data GEO bulk
191 ulp1c ulp1d +Pto 0.39 >More info 0.56 >More info ulp1c ulp1d mock Original data GEO bulk
192 3x(p) 0.39 >More info 0.56 >More info 2x two week old seedlings Original data
193 plant (tga2-5-6) 4h OPDA 0.58 >More info 0.37 >More info plant (tga2-5-6) 4h control Original data GEO bulk
194 21h-DC3000 avrRpm1 -0.66 >More info -0.29 >More info 21h-DC3000 leaves Original data GEO bulk
195 CAX1/CAX3 mutant 0.54 >More info 0.41 >More info Col whole plant Original data GEO bulk
196 leaf13 0.52 >More info 0.43 >More info unwounded leaves none Original data GEO bulk
197 HSP90 Reduced RNAi-A2 0.53 >More info 0.42 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
198 RGA-GR-DEX 0.34 >More info 0.61 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
199 oligomycin 4 h 0.42 >More info 0.53 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
200 erf104-ko Flg22 4h 0.28 >More info 0.66 >More info erf104-ko H2O 4h Original data GEO bulk
201 P.p 2.5hai 0.39 >More info 0.55 >More info At-Control roots Original data GEO bulk
202 WT-NOCO2 INFECTED 0.51 >More info 0.43 >More info WT-MOCK Original data GEO bulk
203 gpa1-4/agb1-2 ozone 2d -0.54 >More info -0.39 >More info Col ozone 2d ozone Original data GEO bulk
204 Col ozone 3h 0.40 >More info 0.53 >More info Col clean-air 3h ozone Original data GEO bulk
205 8hr-pH4.5 0.51 >More info 0.42 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
206 cpr5npr1 0.61 >More info 0.32 >More info WT(COL) Original data GEO bulk
207 gun1gun5 far-red pretreated -0.50 >More info -0.43 >More info WT far-red pretreated Original data GEO bulk
208 WT 30μM arsenate 8 hours. 0.50 >More info 0.43 >More info WT control (not supplemented). Original data
209 col-5 DC3000-avrRpm 4h 0.36 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
210 seedlings-week-old RECA1-overexpressing
transgenic		 0.34 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
211 plant (Col-0) 4h OPDA 0.55 >More info 0.37 >More info plant (Col-0) 4h control Original data GEO bulk
212 OPDA 4 h 0.55 >More info 0.37 >More info Col-0 Original data GEO bulk
213 ABA JA 3h 0.53 >More info 0.39 >More info EtOH 3h 3hr Original data GEO bulk
214 35S:RPS4 rrs1-11 24h -0.58 >More info -0.34 >More info 35S:RPS4 24h leaves Original data
215 Col-0 drought 0.50 >More info 0.42 >More info Col-0 control Original data GEO bulk
216 dde2-2 9 hpi A. brassicicola 0.51 >More info 0.40 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
217 toc1-1-57hr 0.56 >More info 0.35 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
218 dicamba 0.66 >More info 0.25 >More info WT mock whole seedling Original data GEO bulk
219 A. thaliana-A. lyrata hybrid -0.35 >More info -0.56 >More info A. thaliana mature leaves before flowering Original data GEO bulk
220 GO5; 8h switch to ambient CO2 concentrations; 0.40 >More info 0.51 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
221 xyl-grown cell culture- 1h 1mM Fru -0.34 >More info -0.56 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
222 rosettes myoox drought 0.54 >More info 0.36 >More info rosettes myoox watered Original data GEO bulk
223 Shoot P recovery 0.66 >More info 0.24 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
224 toc1-1-61hr 0.54 >More info 0.36 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
225 cell culture 4 h phytoprostane A1 0.39 >More info 0.51 >More info cell culture 4 h control Original data GEO bulk
226 smg7b-1 0.39 >More info 0.51 >More info WT whole plant Original data GEO bulk
227 Pst-DC3000(avrRpm1)-4hpi 0.40 >More info 0.50 >More info Pst-DC3000-4hpi Original data GEO bulk
228 TNT-seedlings 0.30 >More info 0.60 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
229 rosettes WT drought 0.56 >More info 0.33 >More info rosettes WT watered Original data GEO bulk
230 vtc2 (I) 0.51 >More info 0.38 >More info Col (I) rosette Original data GEO bulk
231 Te 3d 0.54 >More info 0.35 >More info Te CA Leaves Original data
232 4tga safener -0.54 >More info -0.35 >More info safener treated safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
233 Laer Flg22+GA 1h 0.38 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
234 seedlings protease IV 0.37 >More info 0.52 >More info seedlings nontreated control whole seedling Original data
235 SOS1 0mM NaCl 0.57 >More info 0.32 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
236 mil4 BTH 0.57 >More info 0.32 >More info Col BTH rosettes Original data GEO bulk
237 pepr1-1 Pepr2-3 +Pep2 2h -0.34 >More info -0.54 >More info WT +Pep2 2h Pep2 Original data GEO bulk
238 Laer pretreat GA Flg22 2h 0.53 >More info 0.35 >More info Laer pretreat water control leaf discs Original data GEO bulk
239 Heat shock 20%Inhibition 0.53 >More info 0.35 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
240 whole roots 140 mM NaCl 30 minutes 0.37 >More info 0.51 >More info whole roots standard Original data GEO bulk
241 WT seedlings MV 0.36 >More info 0.52 >More info WT seedlings control Seedlings Original data GEO bulk
242 pif4pif5 mut dark -0.31 >More info -0.56 >More info WT dark Original data GEO bulk
243 ABA SA 3h 0.50 >More info 0.37 >More info EtOH 3h 3hr Original data GEO bulk
244 pip3 At2g19270 TDNA 9 0.36 >More info 0.51 >More info Col-0 whole plant Original data GEO bulk
245 Elevated CO2 AMPLE N NIGHT 0.27 >More info 0.60 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
246 AFB1 0h 0.54 >More info 0.32 >More info Col 0h Leaf Original data GEO bulk
247 12h-DC3000 avrRpm1 0.54 >More info 0.32 >More info 12h-DC3000 leaves Original data GEO bulk
248 Cocultivation 8 hrs root 0.52 >More info 0.34 >More info Mock cocultivation 8 hrs root Root Original data
249 35S::PI ap3-3 35S::AP-GR +DEX 0.32 >More info 0.54 >More info 0hr DEX Original data GEO bulk
250 edr1 36 h powdery mildew 0.50 >More info 0.36 >More info Col-0 36 h powdery mildew Original data GEO bulk
251 toc1-1-53hr 0.60 >More info 0.26 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
252 root longitudinal zone-1 -Fe -0.22 >More info -0.64 >More info root longitudinal zone-1 standard Original data GEO bulk
253 Compost 0.54 >More info 0.31 >More info Perlite Compost Original data GEO bulk
254 wt systemic wounding 0.34 >More info 0.51 >More info wt control leaves Original data GEO bulk
255 inhibitor A Treated 0.25 >More info 0.60 >More info Negative Control Original data GEO bulk
256 toc1-1-65hr 0.54 >More info 0.30 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
257 Col whole leaf 5dpi 0.28 >More info 0.56 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
258 WT H2O2 3h 0.31 >More info 0.53 >More info WT water 3h 3h_H2O2 Original data GEO bulk
259 35S:RPS4 eds1-2 2h -0.30 >More info -0.54 >More info 35S:RPS4 2h leaves Original data
260 SA Treated 0.76 >More info 0.08 >More info Water Original data GEO bulk
261 Cocultivation 8 hrs leaf 0.51 >More info 0.32 >More info Mock cocultivation 8 hrs leaf Leaf Original data
262 +1.6 mM Tween 20 1 h. 0.54 >More info 0.29 >More info +distilled water 1 h. Original data GEO bulk
263 siliques AtHb1 control 0.30 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
264 Col-O high light 0.29 >More info 0.53 >More info Col-O bule light Original data GEO bulk
265 mbd4 mutant thaliana 10-day-old seedling 0.57 >More info 0.25 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
266 AtGATA2ox 0.52 >More info 0.29 >More info Col seedling Original data GEO bulk
267 WT 90-105 min Xanthomonas 0.25 >More info 0.56 >More info WT T0 Original data GEO bulk
268 sicy-192 gun1-101 cotyledons 0.28 >More info 0.53 >More info WT cotyledons cotyledons Original data
269 overexpresser LBD38 in -N -0.52 >More info -0.28 >More info WT in -N nitrogen depletion whole seedling Original data GEO bulk
270 Mutant ein2(leaf) -0.55 >More info -0.25 >More info Col-0 (leaf) Original data GEO bulk
271 8-DAC chr11-1chr17-1 0.51 >More info 0.29 >More info 8-DAC Col-0 leaf explants Original data
272 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.61 >More info -0.19 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
273 Te CA -0.56 >More info -0.24 >More info Col CA Leaves Original data
274 downy mildew cotyledons late stage 0.54 >More info 0.24 >More info mock inoculated Cotyledons Original data GEO bulk
275 sfr2 control -0.56 >More info -0.22 >More info WT control All aerial tissue Original data GEO bulk
276 WT flg22 1h 0.22 >More info 0.56 >More info WT 0h Leaf tissue Original data GEO bulk
277 GA 0.27 >More info 0.51 >More info none GA Rosette Original data GEO bulk
278 SCR-GR Time 1H Dex 0.27 >More info 0.50 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
279 WT NAA 2h -0.22 >More info -0.55 >More info WT 0h Leaf tissue Original data GEO bulk
280 Differentiation 12h 0.52 >More info 0.24 >More info Differentiation 0h leaves Original data
281 sfr6 control -0.56 >More info -0.20 >More info WT control All aerial tissue Original data GEO bulk
282 Col-0 Flg22 4h 0.20 >More info 0.56 >More info Col-0 H2O 4h Original data GEO bulk
283 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
284 NJ15 0.13 >More info 0.62 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
285 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
286 AFB1 flg22 2h 0.21 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
287 C24 24h cold -0.50 >More info -0.23 >More info Col 24h cold leaf Original data GEO bulk
288 5-Triiodobenzoic acid3 h 0.19 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
289 Red/FR Light45min 0.12 >More info 0.61 >More info FarRed Light 45min Original data Light treatments
290 Dex-rga(delta17) 4h GA4+DEX -0.22 >More info -0.51 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
291 Kin 0.61 >More info 0.11 >More info Col-0 Original data GEO bulk
292 aba1 hypocotyl 0.21 >More info 0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
293 GST 4 h (leaf) 0.19 >More info 0.52 >More info Mock 4 h (leaf) Original data Elicitor treatments
294 clf-28 0.18 >More info 0.53 >More info Col whole plant Original data GEO bulk
295 JA 3h 0.21 >More info 0.50 >More info EtOH 3h 3hr Original data GEO bulk
296 Col PSTDC3000 24h 0.83 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
297 Cycloheximide 3 h 0.18 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
298 WT NAA/flg 1h 0.20 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
299 triploid female excess -0.04 >More info -0.65 >More info tetraploid Original data GEO bulk
300 oligomycin 1 h 0.18 >More info 0.51 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
301 treated group 0.56 >More info 0.12 >More info Control group Original data
302 penta Flg22 1h 0.55 >More info 0.13 >More info Laer Flg22 1h leaf discs Original data GEO bulk
303 Ba1 UV 0.50 >More info 0.17 >More info Ba1 mock UV seedling Original data
304 Shoot apex inflorescence (after bolting) 0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
305 mil4 0.57 >More info 0.10 >More info Col rosettes Original data GEO bulk
306 35S::ERF104 Flg22 4h 0.07 >More info 0.60 >More info 35S::ERF104 H2O 4h Original data GEO bulk
307 Protoplast Induced 0.07 >More info 0.60 >More info Uninduced Original data GEO bulk
308 D2O 0.52 >More info 0.13 >More info H2O seedling Original data GEO bulk
309 6-trichlorophenoxyacetic acid 3 h -0.01 >More info 0.64 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
310 tunicamycin -0.13 >More info -0.50 >More info DMF Original data GEO bulk
311 bri1-116 -0.11 >More info 0.73 >More info Col seedling Original data GEO bulk
312 abi1 hypocotyl 0.06 >More info 0.55 >More info Ler hypocotyl hypocotyl Original data GEO bulk
313 myb triple mutant 8h-pollinated ms1 0.52 >More info 0.08 >More info WT 8h-pollinated pistil Original data GEO bulk
314 Blue Light 45 min 0.03 >More info -0.63 >More info White Light 45min Original data Light treatments
315 Col dryseed 0.51 >More info 0.07 >More info Control for tissue data dry seeds Original data
316 4C 6h 0.50 >More info 0.07 >More info 22C 3h Original data GEO bulk
317 Shoot submergence 7h 0.56 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
318 miR393 flg22 2h 0.02 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
319 AFB1 flg22 1h 0.03 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
320 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
321 long 14-degree- 0.55 >More info -0.00 >More info control long Original data GEO bulk
322 col-5 hrpA 4h 0.04 >More info 0.51 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
323 L2.4 mutant -0.50 >More info -0.04 >More info Wt Original data GEO bulk
324 short 8-degree- 0.56 >More info -0.03 >More info control short Original data GEO bulk
325 HairpinZ 4 h (leaf) 0.56 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
326 tetraploid -0.04 >More info 0.56 >More info diploid Original data GEO bulk
327 Rose Bengal 0.5 uM -0.03 >More info 0.55 >More info Control RB and PER Rose Bengal Original data
328 Mutant iaa17-6 (IAA) -0.01 >More info -0.50 >More info Col (IAA) Original data GEO bulk
329 miR393 flg22 1h -0.04 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
330 cat2-short-day 4d -0.10 >More info 0.59 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
331 WT+chitooctaose -0.09 >More info 0.56 >More info WT+water chitooctaose seedlings Original data GEO bulk
332 chito-octamer -0.03 >More info 0.50 >More info Col Mock Original data GEO bulk
333 col-5 DC3000 4h -0.12 >More info 0.53 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
334 DUO1 induced 6h -0.50 >More info 0.11 >More info 6hr-not-induced whole plant Original data GEO bulk
335 WT NAA 1h 0.16 >More info -0.54 >More info WT 0h Leaf tissue Original data GEO bulk
336 WT-Dry -0.18 >More info 0.54 >More info WT-CK dehydration treatment 1h Original data
337 Leaf wounded -0.23 >More info 0.59 >More info Leaf control vegetative leaf Original data GEO bulk
338 35S::RSL4 0.53 >More info -0.18 >More info Col-0 Control root Original data GEO bulk
339 CDB1-Knockout 0.52 >More info -0.18 >More info WT Original data GEO bulk
340 short 17-degree- 0.48 >More info -0.55 >More info control short Original data GEO bulk